Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:57:54 (1063469): wrapper (7.7.26015): starting
13:57:54 (1063469): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 13:57:54] Arguments: --nthreads 3
[2025-11-24 13:57:54] Threads: 3
[2025-11-24 13:57:54] Checking for CVMFS
[2025-11-24 13:57:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:57:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:57:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:57:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:57:54] 2.9.2.0 4159227 8218 88632 153246 3 81 35961009 36864000 0 130560 0 3036720 99.915 456543 6400 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 13:57:54] CVMFS is ok
[2025-11-24 13:57:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 13:57:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 13:57:54] Further information can be found at the LHC@home message board.
[2025-11-24 13:57:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:57:54] Checking for apptainer binary...
[2025-11-24 13:57:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:57:54] Running /usr/bin/apptainer --version
[2025-11-24 13:57:54] apptainer version 1.4.1-1.1
[2025-11-24 13:57:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:57:54] thA349
[2025-11-24 13:57:54] apptainer works
[2025-11-24 13:57:54] Set ATHENA_PROC_NUMBER=3
[2025-11-24 13:57:54] Set ATHENA_CORE_NUMBER=3
[2025-11-24 13:57:54] Starting ATLAS job with PandaID=6894258927
[2025-11-24 13:57:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:57:38]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:57:38] VERSION="7 (Core)"
[2025-11-24 21:57:38] ID="centos"
[2025-11-24 21:57:38] ID_LIKE="rhel fedora"
[2025-11-24 21:57:38] VERSION_ID="7"
[2025-11-24 21:57:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 21:57:38] ANSI_COLOR="0;31"
[2025-11-24 21:57:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 21:57:38] HOME_URL="https://www.centos.org/"
[2025-11-24 21:57:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 21:57:38] 
[2025-11-24 21:57:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 21:57:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 21:57:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 21:57:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:57:38] 
[2025-11-24 21:57:38] 2025-11-24 20:56:33,501 | INFO     | ***************************************
[2025-11-24 21:57:38] 2025-11-24 20:56:34,004 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 21:57:38] 2025-11-24 20:56:34,017 | INFO     | sufficient remaining disk space (265679798272 B)
[2025-11-24 21:57:38] 2025-11-24 20:56:34,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:57:38] 2025-11-24 20:56:34,017 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:57:38] 2025-11-24 20:56:34,017 | INFO     | update_server=False
[2025-11-24 21:57:38] 2025-11-24 20:56:34,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:57:38] 2025-11-24 20:56:34,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:57:38] 2025-11-24 20:56:34,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:57:38] 2025-11-24 20:56:34,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:57:38] 2025-11-24 20:56:34,313 | INFO     | aborting loop
[2025-11-24 21:57:38] 2025-11-24 20:56:34,450 | INFO     | all data control threads have been joined
[2025-11-24 21:57:38] 2025-11-24 20:56:34,787 | INFO     | all job control threads have been joined
[2025-11-24 21:57:38] 2025-11-24 20:56:34,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:57:38] 2025-11-24 20:56:35,022 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:35,023 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:35,154 | INFO     | all payload control threads have been joined
[2025-11-24 21:57:38] 2025-11-24 20:56:35,318 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:35,456 | INFO     | [data] control thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:35,793 | INFO     | [job] control thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:35,805 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:36,160 | INFO     | [payload] control thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:36,262 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:36,286 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:36,341 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:36,425 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:36,440 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:36,458 | INFO     | [job] validate thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:36,473 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:38,913 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:56:45,037 | INFO     | job.realtimelogging is not enabled
[2025-11-24 21:57:38] 2025-11-24 20:56:46,043 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:57:38] 2025-11-24 20:57:04,786 | INFO     | PID=1067196 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 21:57:38] 2025-11-24 20:57:04,787 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:57:38] 2025-11-24 20:57:04,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:57:38] 2025-11-24 20:57:04,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:57:38] 2025-11-24 20:57:32,421 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:57:38] 2025-11-24 20:57:32,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139628590368576)>', '<ExcThread(monitor, started 139627969111808)>']
[2025-11-24 21:57:38] 2025-11-24 20:57:32,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:57:38] 2025-11-24 20:57:32,937 | INFO     | [monitor] control thread has ended
[2025-11-24 21:57:38] 2025-11-24 20:57:37,893 | INFO     | all workflow threads have been joined
[2025-11-24 21:57:38] 2025-11-24 20:57:37,893 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:57:38] 2025-11-24 20:57:37,894 | INFO     | traces error code: 0
[2025-11-24 21:57:38] 2025-11-24 20:57:37,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:57:38] 2025-11-24 20:57:37,946 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:57:38] 2025-11-24 20:57:37,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:57:38] 2025-11-24 20:57:37,951 [wrapper] pilotpid: 1067196
[2025-11-24 21:57:38] 2025-11-24 20:57:37,954 [wrapper] Pilot exit status: 0
[2025-11-24 21:57:38] 2025-11-24 20:57:37,961 [wrapper] pandaids: 6894258927
[2025-11-24 21:57:38] 2025-11-24 20:57:37,980 [wrapper] cleanup supervisor_pilot 1124460 1067197
[2025-11-24 21:57:38] 2025-11-24 20:57:37,982 [wrapper] Test setup, not cleaning
[2025-11-24 21:57:38] 2025-11-24 20:57:37,985 [wrapper] apfmon messages muted
[2025-11-24 21:57:38] 2025-11-24 20:57:37,987 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:57:38] 2025-11-24 20:57:37,990 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:57:38]  *** Error codes and diagnostics ***
[2025-11-24 21:57:38]     "exeErrorCode": 0,
[2025-11-24 21:57:38]     "exeErrorDiag": "",
[2025-11-24 21:57:38]     "pilotErrorCode": 0,
[2025-11-24 21:57:38]     "pilotErrorDiag": "",
[2025-11-24 21:57:38]  *** Listing of results directory ***
[2025-11-24 21:57:38] total 1305752
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc    576529 Nov 21 04:09 pilot3.tar.gz
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc      5112 Nov 21 05:04 queuedata.json
[2025-11-24 21:57:38] -rwx------ 1 boinc boinc     36292 Nov 21 05:04 runpilot2-wrapper.sh
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc       100 Nov 24 13:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:57:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 13:57 run_atlas
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc       105 Nov 24 13:57 job.xml
[2025-11-24 21:57:38] -rw-r--r-- 2 boinc boinc 409308467 Nov 24 13:57 EVNT.47493127._002178.pool.root.1
[2025-11-24 21:57:38] -rw-r--r-- 2 boinc boinc    590103 Nov 24 13:57 input.tar.gz
[2025-11-24 21:57:38] -rw-r--r-- 2 boinc boinc     15847 Nov 24 13:57 start_atlas.sh
[2025-11-24 21:57:38] drwxrwx--x 2 boinc boinc      4096 Nov 24 13:57 shared
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc         0 Nov 24 13:57 boinc_setup_complete
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc      6446 Nov 24 13:57 init_data.xml
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc         0 Nov 24 13:57 boinc_lockfile
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc      2786 Nov 24 13:57 pandaJob.out
[2025-11-24 21:57:38] -rw------- 1 boinc boinc    988279 Nov 24 13:57 agis_schedconf.cvmfs.json
[2025-11-24 21:57:38] drwx------ 5 boinc boinc      4096 Nov 24 13:58 pilot3
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc       532 Nov 24 21:53 boinc_task_state.xml
[2025-11-24 21:57:38] -rw------- 1 boinc boinc 913472247 Nov 24 21:56 HITS.47533967._001496.pool.root.1
[2025-11-24 21:57:38] -rw------- 1 boinc boinc        95 Nov 24 21:56 pilot_heartbeat.json
[2025-11-24 21:57:38] -rw------- 1 boinc boinc      1020 Nov 24 21:56 memory_monitor_summary.json
[2025-11-24 21:57:38] -rw------- 1 boinc boinc   1516227 Nov 24 21:56 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:57:38] -rw------- 1 boinc boinc   1165027 Nov 24 21:56 log.47533967._001496.job.log.tgz.1
[2025-11-24 21:57:38] -rw------- 1 boinc boinc      8560 Nov 24 21:56 heartbeat.json
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc      8192 Nov 24 21:57 boinc_mmap_file
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc        28 Nov 24 21:57 wrapper_checkpoint.txt
[2025-11-24 21:57:38] -rw------- 1 boinc boinc      4824 Nov 24 21:57 pilotlog.txt
[2025-11-24 21:57:38] -rw------- 1 boinc boinc   4040691 Nov 24 21:57 log.47533967._001496.job.log.1
[2025-11-24 21:57:38] -rw------- 1 boinc boinc       353 Nov 24 21:57 output.list
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc       620 Nov 24 21:57 runtime_log
[2025-11-24 21:57:38] -rw------- 1 boinc boinc   5222400 Nov 24 21:57 result.tar.gz
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc      8898 Nov 24 21:57 runtime_log.err
[2025-11-24 21:57:38] -rw------- 1 boinc boinc       665 Nov 24 21:57 iLYLDmTZXg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmizIKDmMH2bim.diag
[2025-11-24 21:57:38] -rw-r--r-- 1 boinc boinc      8759 Nov 24 21:57 stderr.txt
[2025-11-24 21:57:38] HITS file was successfully produced:
[2025-11-24 21:57:38] -rw------- 1 boinc boinc 913472247 Nov 24 21:56 shared/HITS.pool.root.1
[2025-11-24 21:57:38]  *** Contents of shared directory: ***
[2025-11-24 21:57:38] total 1297484
[2025-11-24 21:57:38] -rw-r--r-- 2 boinc boinc 409308467 Nov 24 13:57 ATLAS.root_0
[2025-11-24 21:57:38] -rw-r--r-- 2 boinc boinc    590103 Nov 24 13:57 input.tar.gz
[2025-11-24 21:57:38] -rw-r--r-- 2 boinc boinc     15847 Nov 24 13:57 start_atlas.sh
[2025-11-24 21:57:38] -rw------- 1 boinc boinc 913472247 Nov 24 21:56 HITS.pool.root.1
[2025-11-24 21:57:38] -rw------- 1 boinc boinc   5222400 Nov 24 21:57 result.tar.gz
21:57:39 (1063469): run_atlas exited; CPU time 84836.520885
21:57:39 (1063469): called boinc_finish(0)

</stderr_txt>
]]>

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