Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:22:50 (1834954): wrapper (7.7.26015): starting
05:22:50 (1834954): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 05:22:50] Arguments: --nthreads 4
[2025-11-25 05:22:50] Threads: 4
[2025-11-25 05:22:50] Checking for CVMFS
[2025-11-25 05:22:50] No cvmfs_config command found, will try listing directly
[2025-11-25 05:22:50] CVMFS is ok
[2025-11-25 05:22:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:22:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:22:50] Further information can be found at the LHC@home message board.
[2025-11-25 05:22:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:22:50] Checking for apptainer binary...
[2025-11-25 05:22:50] which: no apptainer in ((null))
[2025-11-25 05:22:50] apptainer is not installed, using version from CVMFS
[2025-11-25 05:22:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:22:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-25 05:22:51] apptainer works
[2025-11-25 05:22:51] Set ATHENA_PROC_NUMBER=4
[2025-11-25 05:22:51] Set ATHENA_CORE_NUMBER=4
[2025-11-25 05:22:51] Starting ATLAS job with PandaID=6893856245
[2025-11-25 05:22:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:06:11]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:06:11] 2025-11-25 20:01:35,782 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 21:06:11] 2025-11-25 20:01:35,801 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2689.874578125001
[2025-11-25 21:06:11] 2025-11-25 20:01:35,824 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6893856245/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 21:06:11] 2025-11-25 20:01:35,825 | INFO     | extracted standard info from prmon json
[2025-11-25 21:06:11] 2025-11-25 20:01:35,825 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 21:06:11] 2025-11-25 20:01:35,825 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 21:06:11] 2025-11-25 20:01:35,840 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:06:11] 2025-11-25 20:01:35,841 | INFO     | sum of square deviations: 243827686102.0
[2025-11-25 21:06:11] 2025-11-25 20:01:35,859 | INFO     | sum of deviations: 564858983373.9998
[2025-11-25 21:06:11] 2025-11-25 20:01:35,859 | INFO     | mean x: 1764072745.0
[2025-11-25 21:06:11] 2025-11-25 20:01:35,860 | INFO     | mean y: 2282002.72156013
[2025-11-25 21:06:11] 2025-11-25 20:01:35,860 | INFO     | intersect: -4084425102.892513
[2025-11-25 21:06:11] 2025-11-25 20:01:35,861 | INFO     | chi2: 3.9866390706664125
[2025-11-25 21:06:11] 2025-11-25 20:01:35,862 | INFO     | sum of square deviations: 239886579649.5
[2025-11-25 21:06:11] 2025-11-25 20:01:35,879 | INFO     | sum of deviations: 750148816593.5002
[2025-11-25 21:06:11] 2025-11-25 20:01:35,880 | INFO     | mean x: 1764072592.5
[2025-11-25 21:06:11] 2025-11-25 20:01:35,880 | INFO     | mean y: 2289164.493464052
[2025-11-25 21:06:11] 2025-11-25 20:01:35,880 | INFO     | intersect: -5514138513.880253
[2025-11-25 21:06:11] 2025-11-25 20:01:35,881 | INFO     | chi2: 1.960906672442139
[2025-11-25 21:06:11] 2025-11-25 20:01:35,881 | INFO     | current chi2=1.960906672442139 (change=50.81303730577369 %)
[2025-11-25 21:06:11] 2025-11-25 20:01:35,882 | INFO     | sum of square deviations: 235988171672.0
[2025-11-25 21:06:11] 2025-11-25 20:01:35,900 | INFO     | sum of deviations: 747303479309.9988
[2025-11-25 21:06:11] 2025-11-25 20:01:35,900 | INFO     | mean x: 1764072440.0
[2025-11-25 21:06:11] 2025-11-25 20:01:35,900 | INFO     | mean y: 2289052.300109529
[2025-11-25 21:06:11] 2025-11-25 20:01:35,900 | INFO     | intersect: -5583997170.549995
[2025-11-25 21:06:11] 2025-11-25 20:01:35,901 | INFO     | chi2: 1.9529297782495272
[2025-11-25 21:06:11] 2025-11-25 20:01:35,901 | INFO     | current chi2=1.9529297782495272 (change=0.4067962185409461 %)
[2025-11-25 21:06:11] 2025-11-25 20:01:35,901 | INFO     | right removable region: 912
[2025-11-25 21:06:11] 2025-11-25 20:01:35,902 | INFO     | sum of square deviations: 239886579649.5
[2025-11-25 21:06:11] 2025-11-25 20:01:35,920 | INFO     | sum of deviations: 399452536548.49994
[2025-11-25 21:06:11] 2025-11-25 20:01:35,921 | INFO     | mean x: 1764072897.5
[2025-11-25 21:06:11] 2025-11-25 20:01:35,921 | INFO     | mean y: 2288390.739651416
[2025-11-25 21:06:11] 2025-11-25 20:01:35,921 | INFO     | intersect: -2935197293.5050683
[2025-11-25 21:06:11] 2025-11-25 20:01:35,922 | INFO     | chi2: 2.158302536359261
[2025-11-25 21:06:11] 2025-11-25 20:01:35,922 | INFO     | current chi2=2.158302536359261 (change=45.861601762748094 %)
[2025-11-25 21:06:11] 2025-11-25 20:01:35,923 | INFO     | sum of square deviations: 235988171672.0
[2025-11-25 21:06:11] 2025-11-25 20:01:35,940 | INFO     | sum of deviations: 388525232893.0001
[2025-11-25 21:06:11] 2025-11-25 20:01:35,940 | INFO     | mean x: 1764073050.0
[2025-11-25 21:06:11] 2025-11-25 20:01:35,940 | INFO     | mean y: 2288817.635268346
[2025-11-25 21:06:11] 2025-11-25 20:01:35,940 | INFO     | intersect: -2902038495.617255
[2025-11-25 21:06:11] 2025-11-25 20:01:35,941 | INFO     | chi2: 2.156721353602527
[2025-11-25 21:06:11] 2025-11-25 20:01:35,941 | INFO     | current chi2=2.156721353602527 (change=0.07326047808854665 %)
[2025-11-25 21:06:11] 2025-11-25 20:01:35,941 | INFO     | left removable region: 20
[2025-11-25 21:06:11] 2025-11-25 20:01:35,942 | INFO     | sum of square deviations: 220075877043.0
[2025-11-25 21:06:11] 2025-11-25 20:01:35,959 | INFO     | sum of deviations: 564535617188.9999
[2025-11-25 21:06:11] 2025-11-25 20:01:35,959 | INFO     | mean x: 1764073019.5
[2025-11-25 21:06:11] 2025-11-25 20:01:35,959 | INFO     | mean y: 2296161.798206278
[2025-11-25 21:06:11] 2025-11-25 20:01:35,959 | INFO     | intersect: -4522879719.406223
[2025-11-25 21:06:11] 2025-11-25 20:01:35,960 | INFO     | chi2: 0.10541066268934234
[2025-11-25 21:06:11] 2025-11-25 20:01:35,960 | INFO     | current memory leak: 2.57 B/s (using 892 data points, chi2=0.11)
[2025-11-25 21:06:11] 2025-11-25 20:01:35,961 | INFO     | could have reported an average CPU frequency of 2690 MHz (35 samples)
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | ..............................
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | . Timing measurements:
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | . get job = 0 s
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | . initial setup = 1 s
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | . payload setup = 9 s
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | . stage-in = 0 s
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | . payload execution = 56266 s
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | . stage-out = 2 s
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | . log creation = 0 s
[2025-11-25 21:06:11] 2025-11-25 20:01:35,962 | INFO     | ..............................
[2025-11-25 21:06:11] 2025-11-25 20:01:36,049 | INFO     | 
[2025-11-25 21:06:11] 2025-11-25 20:01:36,049 | INFO     | job summary report
[2025-11-25 21:06:11] 2025-11-25 20:01:36,049 | INFO     | --------------------------------------------------
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | PanDA job id: 6893856245
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | task id: 47523449
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | errors: (none)
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | pilot state: finished 
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | transexitcode: 0
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | exeerrorcode: 0
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | exeerrordiag: 
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | exitcode: 0
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | exitmsg: OK
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | cpuconsumptiontime: 223368 s
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | nevents: 1000
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | neventsw: 0
[2025-11-25 21:06:11] 2025-11-25 20:01:36,050 | INFO     | pid: 1849523
[2025-11-25 21:06:11] 2025-11-25 20:01:36,051 | INFO     | pgrp: 1849523
[2025-11-25 21:06:11] 2025-11-25 20:01:36,051 | INFO     | corecount: 4
[2025-11-25 21:06:11] 2025-11-25 20:01:36,051 | INFO     | event service: False
[2025-11-25 21:06:11] 2025-11-25 20:01:36,051 | INFO     | sizes: {0: 2284151, 1: 2284350, 8: 2284612, 11: 2284640, 56280: 2337737, 56281: 2337736, 56283: 2346999, 56290: 2347189}
[2025-11-25 21:06:11] 2025-11-25 20:01:36,051 | INFO     | --------------------------------------------------
[2025-11-25 21:06:11] 2025-11-25 20:01:36,051 | INFO     | 
[2025-11-25 21:06:11] 2025-11-25 20:01:36,051 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-11-25 21:06:11] 2025-11-25 20:01:36,080 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,080 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,080 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,080 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:06:11] 2025-11-25 20:01:36,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:06:11] 2025-11-25 20:01:36,083 | INFO     | job 6893856245 has completed (purged errors)
[2025-11-25 21:06:11] 2025-11-25 20:01:36,083 | INFO     | overall cleanup function is called
[2025-11-25 21:06:11] 2025-11-25 20:01:36,970 | INFO     | PID=1839433 has CPU usage=23.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 21:06:11] 2025-11-25 20:01:36,970 | INFO     | .. there are 5 such processes running
[2025-11-25 21:06:11] 2025-11-25 20:01:37,106 | INFO     | --- collectZombieJob: --- 10, [1849523]
[2025-11-25 21:06:11] 2025-11-25 20:01:37,106 | INFO     | zombie collector waiting for pid 1849523
[2025-11-25 21:06:11] 2025-11-25 20:01:37,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:06:11] 2025-11-25 20:01:37,106 | INFO     | collected zombie processes
[2025-11-25 21:06:11] 2025-11-25 20:01:37,106 | INFO     | will attempt to kill all subprocesses of pid=1849523
[2025-11-25 21:06:11] 2025-11-25 20:01:37,879 | INFO     | process IDs to be killed: [1849523] (in reverse order)
[2025-11-25 21:06:11] 2025-11-25 20:01:38,119 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:06:11] 2025-11-25 20:01:38,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:06:11] 2025-11-25 20:01:38,152 | INFO     | did not find any defunct processes belonging to 1849523
[2025-11-25 21:06:11] 2025-11-25 20:01:38,182 | INFO     | did not find any defunct processes belonging to 1849523
[2025-11-25 21:06:11] 2025-11-25 20:01:38,183 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:06:11] 2025-11-25 20:01:38,184 | INFO     | ready for new job
[2025-11-25 21:06:11] 2025-11-25 20:01:38,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:06:11] 2025-11-25 20:01:38,190 | INFO     | ***************************************
[2025-11-25 21:06:11] 2025-11-25 20:01:38,190 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:06:11] 2025-11-25 20:01:38,190 | INFO     | ***************************************
[2025-11-25 21:06:11] 2025-11-25 20:01:38,190 | INFO     | 
[2025-11-25 21:06:11] 2025-11-25 20:01:38,198 | INFO     | architecture information:
[2025-11-25 21:06:11] 2025-11-25 20:01:38,199 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:06:11] 2025-11-25 20:01:38,220 | INFO     | cat /etc/os-release:
[2025-11-25 21:06:11] NAME="CentOS Linux"
[2025-11-25 21:06:11] VERSION="7 (Core)"
[2025-11-25 21:06:11] ID="centos"
[2025-11-25 21:06:11] ID_LIKE="rhel fedora"
[2025-11-25 21:06:11] VERSION_ID="7"
[2025-11-25 21:06:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:06:11] ANSI_COLOR="0;31"
[2025-11-25 21:06:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:06:11] HOME_URL="https://www.centos.org/"
[2025-11-25 21:06:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:06:11] 
[2025-11-25 21:06:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:06:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:06:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:06:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:06:11] 
[2025-11-25 21:06:11] 2025-11-25 20:01:38,220 | INFO     | ***************************************
[2025-11-25 21:06:11] 2025-11-25 20:01:38,723 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-11-25 21:06:11] 2025-11-25 20:01:38,747 | INFO     | sufficient remaining disk space (3274385129472 B)
[2025-11-25 21:06:11] 2025-11-25 20:01:38,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:06:11] 2025-11-25 20:01:38,748 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:06:11] 2025-11-25 20:01:38,748 | INFO     | update_server=False
[2025-11-25 21:06:11] 2025-11-25 20:01:38,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:06:11] 2025-11-25 20:01:38,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:06:11] 2025-11-25 20:01:38,749 | INFO     | aborting loop
[2025-11-25 21:06:11] 2025-11-25 20:01:38,917 | INFO     | all job control threads have been joined
[2025-11-25 21:06:11] 2025-11-25 20:01:39,616 | INFO     | all data control threads have been joined
[2025-11-25 21:06:11] 2025-11-25 20:01:39,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:06:11] 2025-11-25 20:01:39,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:06:11] 2025-11-25 20:01:39,753 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:39,755 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:39,923 | INFO     | [job] control thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:40,244 | INFO     | all payload control threads have been joined
[2025-11-25 21:06:11] 2025-11-25 20:01:40,261 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:40,368 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:40,373 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:40,377 | INFO     | [job] validate thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:40,621 | INFO     | [data] control thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:40,849 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:40,850 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:40,872 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:41,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:06:11] 2025-11-25 20:01:41,248 | INFO     | [payload] control thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:41,625 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:42,063 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:43,715 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:01:49,721 | INFO     | job.realtimelogging is not enabled
[2025-11-25 21:06:11] 2025-11-25 20:01:50,722 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:06:11] 2025-11-25 20:02:10,016 | INFO     | PID=1839433 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 21:06:11] 2025-11-25 20:02:10,019 | INFO     | .. there are 5 such processes running
[2025-11-25 21:06:11] 2025-11-25 20:02:10,019 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:06:11] 2025-11-25 20:02:10,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:06:11] 2025-11-25 20:02:10,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:06:11] 2025-11-25 20:02:38,205 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:06:11] 2025-11-25 20:02:39,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22976652814144)>', '<ExcThread(monitor, started 22976416155392)>']
[2025-11-25 21:06:11] 2025-11-25 20:02:40,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:06:11] 2025-11-25 20:02:40,174 | INFO     | [monitor] control thread has ended
[2025-11-25 21:06:11] 2025-11-25 20:02:45,010 | INFO     | all workflow threads have been joined
[2025-11-25 21:06:11] 2025-11-25 20:02:45,011 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:06:11] 2025-11-25 20:02:45,011 | INFO     | traces error code: 0
[2025-11-25 21:06:11] 2025-11-25 20:02:45,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:06:11] 2025-11-25 20:02:45,162 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:06:11] 2025-11-25 20:02:45,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:06:11] 2025-11-25 20:02:45,171 [wrapper] pilotpid: 1839433
[2025-11-25 21:06:11] 2025-11-25 20:02:45,175 [wrapper] Pilot exit status: 0
[2025-11-25 21:06:11] 2025-11-25 20:02:45,190 [wrapper] pandaids: 6893856245
[2025-11-25 21:06:11] 2025-11-25 20:02:45,367 [wrapper] cleanup supervisor_pilot 3012359 1839434
[2025-11-25 21:06:11] 2025-11-25 20:02:45,371 [wrapper] Test setup, not cleaning
[2025-11-25 21:06:11] 2025-11-25 20:02:45,375 [wrapper] apfmon messages muted
[2025-11-25 21:06:11] 2025-11-25 20:02:45,380 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:06:11] 2025-11-25 20:02:45,384 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:06:11]  *** Error codes and diagnostics ***
[2025-11-25 21:06:11]     "exeErrorCode": 0,
[2025-11-25 21:06:11]     "exeErrorDiag": "",
[2025-11-25 21:06:11]     "pilotErrorCode": 0,
[2025-11-25 21:06:11]     "pilotErrorDiag": "",
[2025-11-25 21:06:11]  *** Listing of results directory ***
[2025-11-25 21:06:11] total 1342200
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-25 21:06:11] -rwx------ 1 boinc boinc     36292 Nov 20 13:49 runpilot2-wrapper.sh
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:49 queuedata.json
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc       100 Nov 25 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:06:11] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 05:22 run_atlas
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc       105 Nov 25 05:22 job.xml
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc      6688 Nov 25 05:22 init_data.xml
[2025-11-25 21:06:11] -rw-r--r-- 2 boinc boinc 411026707 Nov 25 05:22 EVNT.47493127._000459.pool.root.1
[2025-11-25 21:06:11] drwxrwx--x 2 boinc boinc      4096 Nov 25 05:22 shared
[2025-11-25 21:06:11] -rw-r--r-- 2 boinc boinc    590097 Nov 25 05:22 input.tar.gz
[2025-11-25 21:06:11] -rw-r--r-- 2 boinc boinc     15847 Nov 25 05:22 start_atlas.sh
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc         0 Nov 25 05:22 boinc_lockfile
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc      2786 Nov 25 05:22 pandaJob.out
[2025-11-25 21:06:11] -rw------- 1 boinc boinc    991801 Nov 25 05:23 agis_schedconf.cvmfs.json
[2025-11-25 21:06:11] drwx------ 5 boinc boinc      4096 Nov 25 05:23 pilot3
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc       532 Nov 25 20:56 boinc_task_state.xml
[2025-11-25 21:06:11] -rw------- 1 boinc boinc 940603513 Nov 25 21:00 HITS.47523449._004584.pool.root.1
[2025-11-25 21:06:11] -rw------- 1 boinc boinc      1040 Nov 25 21:01 memory_monitor_summary.json
[2025-11-25 21:06:11] -rw------- 1 boinc boinc   1516240 Nov 25 21:01 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:06:11] -rw------- 1 boinc boinc   1670765 Nov 25 21:01 log.47523449._004584.job.log.tgz.1
[2025-11-25 21:06:11] -rw------- 1 boinc boinc      8590 Nov 25 21:01 heartbeat.json
[2025-11-25 21:06:11] -rw------- 1 boinc boinc        95 Nov 25 21:01 pilot_heartbeat.json
[2025-11-25 21:06:11] -rw------- 1 boinc boinc      4907 Nov 25 21:02 pilotlog.txt
[2025-11-25 21:06:11] -rw------- 1 boinc boinc   7757889 Nov 25 21:02 log.47523449._004584.job.log.1
[2025-11-25 21:06:11] -rw------- 1 boinc boinc       353 Nov 25 21:02 output.list
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc       620 Nov 25 21:02 runtime_log
[2025-11-25 21:06:11] -rw------- 1 boinc boinc   9451520 Nov 25 21:02 result.tar.gz
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc      9223 Nov 25 21:02 runtime_log.err
[2025-11-25 21:06:11] -rw------- 1 boinc boinc       670 Nov 25 21:02 HCwLDmcHJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHeGKDmI7d97n.diag
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc        28 Nov 25 21:06 wrapper_checkpoint.txt
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc      8192 Nov 25 21:06 boinc_mmap_file
[2025-11-25 21:06:11] -rw-r--r-- 1 boinc boinc     21103 Nov 25 21:06 stderr.txt
[2025-11-25 21:06:11] HITS file was successfully produced:
[2025-11-25 21:06:11] -rw------- 1 boinc boinc 940603513 Nov 25 21:00 shared/HITS.pool.root.1
[2025-11-25 21:06:11]  *** Contents of shared directory: ***
[2025-11-25 21:06:11] total 1329792
[2025-11-25 21:06:11] -rw-r--r-- 2 boinc boinc 411026707 Nov 25 05:22 ATLAS.root_0
[2025-11-25 21:06:11] -rw-r--r-- 2 boinc boinc    590097 Nov 25 05:22 input.tar.gz
[2025-11-25 21:06:11] -rw-r--r-- 2 boinc boinc     15847 Nov 25 05:22 start_atlas.sh
[2025-11-25 21:06:11] -rw------- 1 boinc boinc 940603513 Nov 25 21:00 HITS.pool.root.1
[2025-11-25 21:06:11] -rw------- 1 boinc boinc   9451520 Nov 25 21:02 result.tar.gz
21:06:12 (1834954): run_atlas exited; CPU time 226378.804029
21:06:12 (1834954): called boinc_finish(0)

</stderr_txt>
]]>

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