Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:57:11 (82567): wrapper (7.7.26015): starting
12:57:11 (82567): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 12:57:11] Arguments: --nthreads 4
[2025-11-26 12:57:11] Threads: 4
[2025-11-26 12:57:11] Checking for CVMFS
[2025-11-26 12:57:11] No cvmfs_config command found, will try listing directly
[2025-11-26 12:57:11] CVMFS is ok
[2025-11-26 12:57:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 12:57:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 12:57:11] Further information can be found at the LHC@home message board.
[2025-11-26 12:57:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 12:57:11] Checking for apptainer binary...
[2025-11-26 12:57:11] which: no apptainer in ((null))
[2025-11-26 12:57:11] apptainer is not installed, using version from CVMFS
[2025-11-26 12:57:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 12:57:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-26 12:57:11] apptainer works
[2025-11-26 12:57:11] Set ATHENA_PROC_NUMBER=4
[2025-11-26 12:57:11] Set ATHENA_CORE_NUMBER=4
[2025-11-26 12:57:11] Starting ATLAS job with PandaID=6894258904
[2025-11-26 12:57:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:49:58]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:49:58] 2025-11-27 04:48:14,540 | INFO     | time since job start (60648s) is within the limit (172800.0s)
[2025-11-27 05:49:58] 2025-11-27 04:48:15,639 | INFO     | monitor loop #4027: job 0:6894258904 is in state 'finished'
[2025-11-27 05:49:58] 2025-11-27 04:48:15,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:49:58] 2025-11-27 04:48:15,861 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 05:49:58] 2025-11-27 04:48:15,882 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2724.1464062499995
[2025-11-27 05:49:58] 2025-11-27 04:48:15,907 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6894258904/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:49:58] 2025-11-27 04:48:15,908 | INFO     | extracted standard info from prmon json
[2025-11-27 05:49:58] 2025-11-27 04:48:15,908 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:49:58] 2025-11-27 04:48:15,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:49:58] 2025-11-27 04:48:15,924 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:49:58] 2025-11-27 04:48:15,926 | INFO     | sum of square deviations: 304534799890.3554
[2025-11-27 05:49:58] 2025-11-27 04:48:15,952 | INFO     | sum of deviations: 796562699882.9869
[2025-11-27 05:49:58] 2025-11-27 04:48:15,952 | INFO     | mean x: 1764188567.5120723
[2025-11-27 05:49:58] 2025-11-27 04:48:15,952 | INFO     | mean y: 2285187.501006036
[2025-11-27 05:49:58] 2025-11-27 04:48:15,952 | INFO     | intersect: -4612250848.925945
[2025-11-27 05:49:58] 2025-11-27 04:48:15,953 | INFO     | chi2: 4.259275383124574
[2025-11-27 05:49:58] 2025-11-27 04:48:15,955 | INFO     | sum of square deviations: 299962280607.8544
[2025-11-27 05:49:58] 2025-11-27 04:48:15,980 | INFO     | sum of deviations: 1011855555677.604
[2025-11-27 05:49:58] 2025-11-27 04:48:15,980 | INFO     | mean x: 1764188415.0121334
[2025-11-27 05:49:58] 2025-11-27 04:48:15,980 | INFO     | mean y: 2292362.11627907
[2025-11-27 05:49:58] 2025-11-27 04:48:15,980 | INFO     | intersect: -5948802040.068872
[2025-11-27 05:49:58] 2025-11-27 04:48:15,981 | INFO     | chi2: 1.9846203145324397
[2025-11-27 05:49:58] 2025-11-27 04:48:15,981 | INFO     | current chi2=1.9846203145324397 (change=53.4047429195213 %)
[2025-11-27 05:49:58] 2025-11-27 04:48:15,982 | INFO     | sum of square deviations: 295435762187.8537
[2025-11-27 05:49:58] 2025-11-27 04:48:16,006 | INFO     | sum of deviations: 1008873146520.2684
[2025-11-27 05:49:58] 2025-11-27 04:48:16,007 | INFO     | mean x: 1764188262.512195
[2025-11-27 05:49:58] 2025-11-27 04:48:16,007 | INFO     | mean y: 2292259.93597561
[2025-11-27 05:49:58] 2025-11-27 04:48:16,007 | INFO     | intersect: -6022171908.769116
[2025-11-27 05:49:58] 2025-11-27 04:48:16,008 | INFO     | chi2: 1.9561235605930596
[2025-11-27 05:49:58] 2025-11-27 04:48:16,008 | INFO     | current chi2=1.9561235605930596 (change=1.435879383613672 %)
[2025-11-27 05:49:58] 2025-11-27 04:48:16,008 | INFO     | right removable region: 983
[2025-11-27 05:49:58] 2025-11-27 04:48:16,009 | INFO     | sum of square deviations: 299962273287.8543
[2025-11-27 05:49:58] 2025-11-27 04:48:16,034 | INFO     | sum of deviations: 616726426830.6409
[2025-11-27 05:49:58] 2025-11-27 04:48:16,035 | INFO     | mean x: 1764188720.0121334
[2025-11-27 05:49:58] 2025-11-27 04:48:16,035 | INFO     | mean y: 2291174.6966632963
[2025-11-27 05:49:58] 2025-11-27 04:48:16,035 | INFO     | intersect: -3624904317.664141
[2025-11-27 05:49:58] 2025-11-27 04:48:16,036 | INFO     | chi2: 2.4297994822682676
[2025-11-27 05:49:58] 2025-11-27 04:48:16,036 | INFO     | current chi2=2.4297994822682676 (change=42.95274985282159 %)
[2025-11-27 05:49:58] 2025-11-27 04:48:16,037 | INFO     | sum of square deviations: 295435747547.85376
[2025-11-27 05:49:58] 2025-11-27 04:48:16,062 | INFO     | sum of deviations: 602824965541.2201
[2025-11-27 05:49:58] 2025-11-27 04:48:16,062 | INFO     | mean x: 1764188872.512195
[2025-11-27 05:49:58] 2025-11-27 04:48:16,062 | INFO     | mean y: 2291642.4817073173
[2025-11-27 05:49:58] 2025-11-27 04:48:16,062 | INFO     | intersect: -3597466020.9273424
[2025-11-27 05:49:58] 2025-11-27 04:48:16,063 | INFO     | chi2: 2.4279682403921243
[2025-11-27 05:49:58] 2025-11-27 04:48:16,063 | INFO     | current chi2=2.4279682403921243 (change=0.07536596700702852 %)
[2025-11-27 05:49:58] 2025-11-27 04:48:16,064 | INFO     | left removable region: 20
[2025-11-27 05:49:58] 2025-11-27 04:48:16,065 | INFO     | sum of square deviations: 276921436491.8504
[2025-11-27 05:49:58] 2025-11-27 04:48:16,088 | INFO     | sum of deviations: 758363892162.0698
[2025-11-27 05:49:58] 2025-11-27 04:48:16,089 | INFO     | mean x: 1764188842.012461
[2025-11-27 05:49:58] 2025-11-27 04:48:16,089 | INFO     | mean y: 2300628.8276220146
[2025-11-27 05:49:58] 2025-11-27 04:48:16,089 | INFO     | intersect: -4829023134.642881
[2025-11-27 05:49:58] 2025-11-27 04:48:16,090 | INFO     | chi2: 0.08761357214115784
[2025-11-27 05:49:58] 2025-11-27 04:48:16,090 | INFO     | current memory leak: 2.74 B/s (using 963 data points, chi2=0.09)
[2025-11-27 05:49:58] 2025-11-27 04:48:16,091 | INFO     | could have reported an average CPU frequency of 2486 MHz (37 samples)
[2025-11-27 05:49:58] 2025-11-27 04:48:16,091 | INFO     | ..............................
[2025-11-27 05:49:58] 2025-11-27 04:48:16,091 | INFO     | . Timing measurements:
[2025-11-27 05:49:58] 2025-11-27 04:48:16,092 | INFO     | . get job = 0 s
[2025-11-27 05:49:58] 2025-11-27 04:48:16,092 | INFO     | . initial setup = 1 s
[2025-11-27 05:49:58] 2025-11-27 04:48:16,092 | INFO     | . payload setup = 9 s
[2025-11-27 05:49:58] 2025-11-27 04:48:16,092 | INFO     | . stage-in = 0 s
[2025-11-27 05:49:58] 2025-11-27 04:48:16,092 | INFO     | . payload execution = 60606 s
[2025-11-27 05:49:58] 2025-11-27 04:48:16,092 | INFO     | . stage-out = 2 s
[2025-11-27 05:49:58] 2025-11-27 04:48:16,092 | INFO     | . log creation = 0 s
[2025-11-27 05:49:58] 2025-11-27 04:48:16,092 | INFO     | ..............................
[2025-11-27 05:49:58] 2025-11-27 04:48:16,191 | INFO     | 
[2025-11-27 05:49:58] 2025-11-27 04:48:16,191 | INFO     | job summary report
[2025-11-27 05:49:58] 2025-11-27 04:48:16,191 | INFO     | --------------------------------------------------
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | PanDA job id: 6894258904
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | task id: 47533967
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | errors: (none)
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | pilot state: finished 
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | transexitcode: 0
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | exeerrorcode: 0
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | exeerrordiag: 
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | exitcode: 0
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | exitmsg: OK
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | cpuconsumptiontime: 240684 s
[2025-11-27 05:49:58] 2025-11-27 04:48:16,192 | INFO     | nevents: 1000
[2025-11-27 05:49:58] 2025-11-27 04:48:16,193 | INFO     | neventsw: 0
[2025-11-27 05:49:58] 2025-11-27 04:48:16,193 | INFO     | pid: 94045
[2025-11-27 05:49:58] 2025-11-27 04:48:16,193 | INFO     | pgrp: 94045
[2025-11-27 05:49:58] 2025-11-27 04:48:16,193 | INFO     | corecount: 4
[2025-11-27 05:49:58] 2025-11-27 04:48:16,193 | INFO     | event service: False
[2025-11-27 05:49:58] 2025-11-27 04:48:16,193 | INFO     | sizes: {0: 2284049, 1: 2284304, 8: 2284566, 12: 2284594, 60619: 2339824, 60622: 2348842, 60623: 2349026, 60632: 2349272}
[2025-11-27 05:49:58] 2025-11-27 04:48:16,193 | INFO     | --------------------------------------------------
[2025-11-27 05:49:58] 2025-11-27 04:48:16,193 | INFO     | 
[2025-11-27 05:49:58] 2025-11-27 04:48:16,193 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-11-27 05:49:58] 2025-11-27 04:48:16,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,226 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,226 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,226 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,227 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:49:58] 2025-11-27 04:48:16,228 | INFO     | job 6894258904 has completed (purged errors)
[2025-11-27 05:49:58] 2025-11-27 04:48:16,228 | INFO     | overall cleanup function is called
[2025-11-27 05:49:58] 2025-11-27 04:48:17,244 | INFO     | --- collectZombieJob: --- 10, [94045]
[2025-11-27 05:49:58] 2025-11-27 04:48:17,245 | INFO     | zombie collector waiting for pid 94045
[2025-11-27 05:49:58] 2025-11-27 04:48:17,245 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:49:58] 2025-11-27 04:48:17,245 | INFO     | collected zombie processes
[2025-11-27 05:49:58] 2025-11-27 04:48:17,245 | INFO     | will attempt to kill all subprocesses of pid=94045
[2025-11-27 05:49:58] 2025-11-27 04:48:18,055 | INFO     | process IDs to be killed: [94045] (in reverse order)
[2025-11-27 05:49:58] 2025-11-27 04:48:18,309 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:49:58] 2025-11-27 04:48:18,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:49:58] 2025-11-27 04:48:18,345 | INFO     | did not find any defunct processes belonging to 94045
[2025-11-27 05:49:58] 2025-11-27 04:48:18,378 | INFO     | did not find any defunct processes belonging to 94045
[2025-11-27 05:49:58] 2025-11-27 04:48:18,380 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:49:58] 2025-11-27 04:48:18,380 | INFO     | ready for new job
[2025-11-27 05:49:58] 2025-11-27 04:48:18,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:49:58] 2025-11-27 04:48:18,386 | INFO     | ***************************************
[2025-11-27 05:49:58] 2025-11-27 04:48:18,386 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:49:58] 2025-11-27 04:48:18,387 | INFO     | ***************************************
[2025-11-27 05:49:58] 2025-11-27 04:48:18,387 | INFO     | 
[2025-11-27 05:49:58] 2025-11-27 04:48:18,395 | INFO     | architecture information:
[2025-11-27 05:49:58] 2025-11-27 04:48:18,396 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:49:58] 2025-11-27 04:48:18,420 | INFO     | cat /etc/os-release:
[2025-11-27 05:49:58] NAME="CentOS Linux"
[2025-11-27 05:49:58] VERSION="7 (Core)"
[2025-11-27 05:49:58] ID="centos"
[2025-11-27 05:49:58] ID_LIKE="rhel fedora"
[2025-11-27 05:49:58] VERSION_ID="7"
[2025-11-27 05:49:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:49:58] ANSI_COLOR="0;31"
[2025-11-27 05:49:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:49:58] HOME_URL="https://www.centos.org/"
[2025-11-27 05:49:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:49:58] 
[2025-11-27 05:49:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:49:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:49:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:49:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:49:58] 
[2025-11-27 05:49:58] 2025-11-27 04:48:18,421 | INFO     | ***************************************
[2025-11-27 05:49:58] 2025-11-27 04:48:18,924 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-11-27 05:49:58] 2025-11-27 04:48:18,950 | INFO     | sufficient remaining disk space (3305686171648 B)
[2025-11-27 05:49:58] 2025-11-27 04:48:18,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:49:58] 2025-11-27 04:48:18,951 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:49:58] 2025-11-27 04:48:18,951 | INFO     | update_server=False
[2025-11-27 05:49:58] 2025-11-27 04:48:18,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:49:58] 2025-11-27 04:48:19,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:49:58] 2025-11-27 04:48:19,149 | INFO     | aborting loop
[2025-11-27 05:49:58] 2025-11-27 04:48:19,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:49:58] 2025-11-27 04:48:19,956 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:20,036 | INFO     | all data control threads have been joined
[2025-11-27 05:49:58] 2025-11-27 04:48:20,135 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:20,154 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:20,157 | INFO     | all job control threads have been joined
[2025-11-27 05:49:58] 2025-11-27 04:48:20,356 | INFO     | all payload control threads have been joined
[2025-11-27 05:49:58] 2025-11-27 04:48:20,574 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:20,620 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:20,809 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:20,828 | INFO     | [job] validate thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:20,957 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:20,989 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:21,042 | INFO     | [data] control thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:21,163 | INFO     | [job] control thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:21,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:49:58] 2025-11-27 04:48:21,219 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:21,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:49:58] 2025-11-27 04:48:21,361 | INFO     | [payload] control thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:21,427 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:22,203 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:25,308 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:49:58] 2025-11-27 04:48:48,443 | INFO     | PID=86595 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 05:49:58] 2025-11-27 04:48:48,444 | INFO     | .. there are 5 such processes running
[2025-11-27 05:49:58] 2025-11-27 04:48:48,444 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:49:58] 2025-11-27 04:48:48,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:49:58] 2025-11-27 04:48:48,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:49:58] 2025-11-27 04:49:04,107 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:49:58] 2025-11-27 04:49:04,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22909453068096)>', '<ExcThread(monitor, started 22909133215488)>']
[2025-11-27 05:49:58] 2025-11-27 04:49:04,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:49:58] 2025-11-27 04:49:04,524 | INFO     | [monitor] control thread has ended
[2025-11-27 05:49:58] 2025-11-27 04:49:09,476 | INFO     | all workflow threads have been joined
[2025-11-27 05:49:58] 2025-11-27 04:49:09,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:49:58] 2025-11-27 04:49:09,476 | INFO     | traces error code: 0
[2025-11-27 05:49:58] 2025-11-27 04:49:09,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:49:58] 2025-11-27 04:49:09,625 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:49:58] 2025-11-27 04:49:09,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:49:58] 2025-11-27 04:49:09,633 [wrapper] pilotpid: 86595
[2025-11-27 05:49:58] 2025-11-27 04:49:09,637 [wrapper] Pilot exit status: 0
[2025-11-27 05:49:58] 2025-11-27 04:49:09,652 [wrapper] pandaids: 6894258904
[2025-11-27 05:49:58] 2025-11-27 04:49:09,832 [wrapper] cleanup supervisor_pilot 1330959 86596
[2025-11-27 05:49:58] 2025-11-27 04:49:09,836 [wrapper] Test setup, not cleaning
[2025-11-27 05:49:58] 2025-11-27 04:49:09,841 [wrapper] apfmon messages muted
[2025-11-27 05:49:58] 2025-11-27 04:49:09,845 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:49:58] 2025-11-27 04:49:09,849 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:49:58]  *** Error codes and diagnostics ***
[2025-11-27 05:49:58]     "exeErrorCode": 0,
[2025-11-27 05:49:58]     "exeErrorDiag": "",
[2025-11-27 05:49:58]     "pilotErrorCode": 0,
[2025-11-27 05:49:58]     "pilotErrorDiag": "",
[2025-11-27 05:49:58]  *** Listing of results directory ***
[2025-11-27 05:49:58] total 1325264
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc    576529 Nov 21 04:09 pilot3.tar.gz
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc      5112 Nov 21 04:57 queuedata.json
[2025-11-27 05:49:58] -rwx------ 1 boinc boinc     36292 Nov 21 04:58 runpilot2-wrapper.sh
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc       100 Nov 26 12:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:49:58] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 12:57 run_atlas
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc       105 Nov 26 12:57 job.xml
[2025-11-27 05:49:58] -rw-r--r-- 2 boinc boinc 408922523 Nov 26 12:57 EVNT.47493127._002176.pool.root.1
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc      6688 Nov 26 12:57 init_data.xml
[2025-11-27 05:49:58] -rw-r--r-- 2 boinc boinc     15847 Nov 26 12:57 start_atlas.sh
[2025-11-27 05:49:58] drwxrwx--x 2 boinc boinc      4096 Nov 26 12:57 shared
[2025-11-27 05:49:58] -rw-r--r-- 2 boinc boinc    590107 Nov 26 12:57 input.tar.gz
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc         0 Nov 26 12:57 boinc_lockfile
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc      2785 Nov 26 12:57 pandaJob.out
[2025-11-27 05:49:58] -rw------- 1 boinc boinc    991830 Nov 26 12:57 agis_schedconf.cvmfs.json
[2025-11-27 05:49:58] drwx------ 5 boinc boinc      4096 Nov 26 12:57 pilot3
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc       532 Nov 27 05:42 boinc_task_state.xml
[2025-11-27 05:49:58] -rw------- 1 boinc boinc 924278596 Nov 27 05:47 HITS.47533967._001473.pool.root.1
[2025-11-27 05:49:58] -rw------- 1 boinc boinc        95 Nov 27 05:47 pilot_heartbeat.json
[2025-11-27 05:49:58] -rw------- 1 boinc boinc      1041 Nov 27 05:47 memory_monitor_summary.json
[2025-11-27 05:49:58] -rw------- 1 boinc boinc   1516240 Nov 27 05:48 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:49:58] -rw------- 1 boinc boinc   1725552 Nov 27 05:48 log.47533967._001473.job.log.tgz.1
[2025-11-27 05:49:58] -rw------- 1 boinc boinc      8608 Nov 27 05:48 heartbeat.json
[2025-11-27 05:49:58] -rw------- 1 boinc boinc      4834 Nov 27 05:49 pilotlog.txt
[2025-11-27 05:49:58] -rw------- 1 boinc boinc   8251190 Nov 27 05:49 log.47533967._001473.job.log.1
[2025-11-27 05:49:58] -rw------- 1 boinc boinc       353 Nov 27 05:49 output.list
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc       620 Nov 27 05:49 runtime_log
[2025-11-27 05:49:58] -rw------- 1 boinc boinc   9994240 Nov 27 05:49 result.tar.gz
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc      9223 Nov 27 05:49 runtime_log.err
[2025-11-27 05:49:58] -rw------- 1 boinc boinc       670 Nov 27 05:49 MSoLDmSTXg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKzIKDmzogJHm.diag
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc        28 Nov 27 05:49 wrapper_checkpoint.txt
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc      8192 Nov 27 05:49 boinc_mmap_file
[2025-11-27 05:49:58] -rw-r--r-- 1 boinc boinc     21101 Nov 27 05:49 stderr.txt
[2025-11-27 05:49:58] HITS file was successfully produced:
[2025-11-27 05:49:58] -rw------- 1 boinc boinc 924278596 Nov 27 05:47 shared/HITS.pool.root.1
[2025-11-27 05:49:58]  *** Contents of shared directory: ***
[2025-11-27 05:49:58] total 1312320
[2025-11-27 05:49:58] -rw-r--r-- 2 boinc boinc 408922523 Nov 26 12:57 ATLAS.root_0
[2025-11-27 05:49:58] -rw-r--r-- 2 boinc boinc     15847 Nov 26 12:57 start_atlas.sh
[2025-11-27 05:49:58] -rw-r--r-- 2 boinc boinc    590107 Nov 26 12:57 input.tar.gz
[2025-11-27 05:49:58] -rw------- 1 boinc boinc 924278596 Nov 27 05:47 HITS.pool.root.1
[2025-11-27 05:49:58] -rw------- 1 boinc boinc   9994240 Nov 27 05:49 result.tar.gz
05:49:59 (82567): run_atlas exited; CPU time 244510.350609
05:49:59 (82567): called boinc_finish(0)

</stderr_txt>
]]>

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