Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:43:32 (7322): wrapper (7.7.26015): starting
13:43:32 (7322): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 13:43:32] Arguments: --nthreads 8
[2025-11-24 13:43:32] Threads: 8
[2025-11-24 13:43:32] Checking for CVMFS
[2025-11-24 13:43:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:43:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:43:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:43:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:43:36] 2.11.2.0 24698 169311 143816 153246 0 236 24404608 25165825 4632 130560 18 58468141 99.901 28293779 2056 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 13:43:36] CVMFS is ok
[2025-11-24 13:43:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:43:36] Checking for apptainer binary...
[2025-11-24 13:43:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:43:36] Running /usr/bin/apptainer --version
[2025-11-24 13:43:36] apptainer version 1.3.2-1.el7
[2025-11-24 13:43:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:43:55] cg-vwn342.simple-grid.lan
[2025-11-24 13:43:55] apptainer works
[2025-11-24 13:43:55] Set ATHENA_PROC_NUMBER=8
[2025-11-24 13:43:55] Set ATHENA_CORE_NUMBER=8
[2025-11-24 13:43:55] Starting ATLAS job with PandaID=6894258284
[2025-11-24 13:43:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:46:43]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:46:43] 2025-11-25 14:45:37,042 | INFO     | monitor loop #6262: job 0:6894258284 is in state 'finished'
[2025-11-25 15:46:43] 2025-11-25 14:45:37,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:46:43] 2025-11-25 14:45:38,985 | INFO     | time since job start (93468s) is within the limit (172800.0s)
[2025-11-25 15:46:43] 2025-11-25 14:45:39,548 | INFO     | monitor loop #6263: job 0:6894258284 is in state 'finished'
[2025-11-25 15:46:43] 2025-11-25 14:45:39,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:46:43] 2025-11-25 14:45:40,998 | INFO     | time since job start (93470s) is within the limit (172800.0s)
[2025-11-25 15:46:43] 2025-11-25 14:45:42,059 | INFO     | monitor loop #6264: job 0:6894258284 is in state 'finished'
[2025-11-25 15:46:43] 2025-11-25 14:45:42,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:46:43] 2025-11-25 14:45:43,005 | INFO     | time since job start (93473s) is within the limit (172800.0s)
[2025-11-25 15:46:43] 2025-11-25 14:45:44,564 | INFO     | monitor loop #6265: job 0:6894258284 is in state 'finished'
[2025-11-25 15:46:43] 2025-11-25 14:45:44,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:46:43] 2025-11-25 14:45:45,012 | INFO     | time since job start (93475s) is within the limit (172800.0s)
[2025-11-25 15:46:43] 2025-11-25 14:45:47,018 | INFO     | time since job start (93477s) is within the limit (172800.0s)
[2025-11-25 15:46:43] 2025-11-25 14:45:47,076 | INFO     | monitor loop #6266: job 0:6894258284 is in state 'finished'
[2025-11-25 15:46:43] 2025-11-25 14:45:47,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:46:43] 2025-11-25 14:45:47,801 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 15:46:43] 2025-11-25 14:45:47,803 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 15:46:43] 2025-11-25 14:45:47,805 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6894258284/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:46:43] 2025-11-25 14:45:47,806 | INFO     | extracted standard info from prmon json
[2025-11-25 15:46:43] 2025-11-25 14:45:47,806 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:46:43] 2025-11-25 14:45:47,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:46:43] 2025-11-25 14:45:47,838 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:46:43] 2025-11-25 14:45:47,841 | INFO     | sum of square deviations: 1095416278783.5485
[2025-11-25 15:46:43] 2025-11-25 14:45:47,910 | INFO     | sum of deviations: 3831129105280.703
[2025-11-25 15:46:43] 2025-11-25 14:45:47,911 | INFO     | mean x: 1764035411.0308602
[2025-11-25 15:46:43] 2025-11-25 14:45:47,911 | INFO     | mean y: 2838622.0485883127
[2025-11-25 15:46:43] 2025-11-25 14:45:47,911 | INFO     | intersect: -6166731373.2513895
[2025-11-25 15:46:43] 2025-11-25 14:45:47,913 | INFO     | chi2: 24.542770797962657
[2025-11-25 15:46:43] 2025-11-25 14:45:47,915 | INFO     | sum of square deviations: 1084663430425.7183
[2025-11-25 15:46:43] 2025-11-25 14:45:47,997 | INFO     | sum of deviations: 4322138845046.391
[2025-11-25 15:46:43] 2025-11-25 14:45:47,997 | INFO     | mean x: 1764035258.5342555
[2025-11-25 15:46:43] 2025-11-25 14:45:47,997 | INFO     | mean y: 2845584.434782609
[2025-11-25 15:46:43] 2025-11-25 14:45:47,997 | INFO     | intersect: -7026436588.330888
[2025-11-25 15:46:43] 2025-11-25 14:45:47,999 | INFO     | chi2: 21.44674061008641
[2025-11-25 15:46:43] 2025-11-25 14:45:48,000 | INFO     | current chi2=21.44674061008641 (change=12.614835600115912 %)
[2025-11-25 15:46:43] 2025-11-25 14:45:48,000 | INFO     | right removable region: 1517
[2025-11-25 15:46:43] 2025-11-25 14:45:48,002 | INFO     | sum of square deviations: 1084662472725.7177
[2025-11-25 15:46:43] 2025-11-25 14:45:48,068 | INFO     | sum of deviations: 3202789210336.3877
[2025-11-25 15:46:43] 2025-11-25 14:45:48,069 | INFO     | mean x: 1764035563.5342555
[2025-11-25 15:46:43] 2025-11-25 14:45:48,069 | INFO     | mean y: 2847532.1080368906
[2025-11-25 15:46:43] 2025-11-25 14:45:48,069 | INFO     | intersect: -5205993200.935261
[2025-11-25 15:46:43] 2025-11-25 14:45:48,071 | INFO     | chi2: 20.004770646439276
[2025-11-25 15:46:43] 2025-11-25 14:45:48,071 | INFO     | current chi2=20.004770646439276 (change=18.49017044114713 %)
[2025-11-25 15:46:43] 2025-11-25 14:45:48,071 | INFO     | left removable region: 10
[2025-11-25 15:46:43] 2025-11-25 14:45:48,074 | INFO     | sum of square deviations: 1061253454222.3658
[2025-11-25 15:46:43] 2025-11-25 14:45:48,220 | INFO     | sum of deviations: 3250583517663.707
[2025-11-25 15:46:43] 2025-11-25 14:45:48,221 | INFO     | mean x: 1764035533.041805
[2025-11-25 15:46:43] 2025-11-25 14:45:48,221 | INFO     | mean y: 2863970.3696084935
[2025-11-25 15:46:43] 2025-11-25 14:45:48,221 | INFO     | intersect: -5400317338.925164
[2025-11-25 15:46:43] 2025-11-25 14:45:48,223 | INFO     | chi2: 12.790987744234977
[2025-11-25 15:46:43] 2025-11-25 14:45:48,223 | INFO     | current memory leak: 3.06 B/s (using 1507 data points, chi2=12.79)
[2025-11-25 15:46:43] 2025-11-25 14:45:48,230 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-25 15:46:43] 2025-11-25 14:45:48,230 | INFO     | ..............................
[2025-11-25 15:46:43] 2025-11-25 14:45:48,230 | INFO     | . Timing measurements:
[2025-11-25 15:46:43] 2025-11-25 14:45:48,230 | INFO     | . get job = 0 s
[2025-11-25 15:46:43] 2025-11-25 14:45:48,230 | INFO     | . initial setup = 9 s
[2025-11-25 15:46:43] 2025-11-25 14:45:48,231 | INFO     | . payload setup = 160 s
[2025-11-25 15:46:43] 2025-11-25 14:45:48,231 | INFO     | . stage-in = 0 s
[2025-11-25 15:46:43] 2025-11-25 14:45:48,231 | INFO     | . payload execution = 93016 s
[2025-11-25 15:46:43] 2025-11-25 14:45:48,231 | INFO     | . stage-out = 4 s
[2025-11-25 15:46:43] 2025-11-25 14:45:48,231 | INFO     | . log creation = 1 s
[2025-11-25 15:46:43] 2025-11-25 14:45:48,231 | INFO     | ..............................
[2025-11-25 15:46:43] 2025-11-25 14:45:48,837 | INFO     | 
[2025-11-25 15:46:43] 2025-11-25 14:45:48,837 | INFO     | job summary report
[2025-11-25 15:46:43] 2025-11-25 14:45:48,837 | INFO     | --------------------------------------------------
[2025-11-25 15:46:43] 2025-11-25 14:45:48,837 | INFO     | PanDA job id: 6894258284
[2025-11-25 15:46:43] 2025-11-25 14:45:48,837 | INFO     | task id: 47533967
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | errors: (none)
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | pilot state: finished 
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | transexitcode: 0
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | exeerrorcode: 0
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | exeerrordiag: 
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | exitcode: 0
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | exitmsg: OK
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | cpuconsumptiontime: 347966 s
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | nevents: 1000
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | neventsw: 0
[2025-11-25 15:46:43] 2025-11-25 14:45:48,838 | INFO     | pid: 17738
[2025-11-25 15:46:43] 2025-11-25 14:45:48,839 | INFO     | pgrp: 17738
[2025-11-25 15:46:43] 2025-11-25 14:45:48,839 | INFO     | corecount: 8
[2025-11-25 15:46:43] 2025-11-25 14:45:48,839 | INFO     | event service: False
[2025-11-25 15:46:43] 2025-11-25 14:45:48,839 | INFO     | sizes: {0: 2284088, 1: 2284287, 12: 2284287, 23: 2284315, 33: 2284343, 44: 2284399, 55: 2284555, 66: 2284583, 76: 2284611, 87: 2284667, 95: 2284957, 98: 2285265, 9
[2025-11-25 15:46:43] 2025-11-25 14:45:48,839 | INFO     | --------------------------------------------------
[2025-11-25 15:46:43] 2025-11-25 14:45:48,839 | INFO     | 
[2025-11-25 15:46:43] 2025-11-25 14:45:48,839 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-25 15:46:43] 2025-11-25 14:45:49,054 | INFO     | time since job start (93479s) is within the limit (172800.0s)
[2025-11-25 15:46:43] 2025-11-25 14:45:49,157 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,159 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:46:43] 2025-11-25 14:45:49,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,159 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:46:43] 2025-11-25 14:45:49,159 | INFO     | job 6894258284 has completed (purged errors)
[2025-11-25 15:46:43] 2025-11-25 14:45:49,160 | INFO     | overall cleanup function is called
[2025-11-25 15:46:43] 2025-11-25 14:45:50,183 | INFO     | --- collectZombieJob: --- 10, [17738]
[2025-11-25 15:46:43] 2025-11-25 14:45:50,183 | INFO     | zombie collector waiting for pid 17738
[2025-11-25 15:46:43] 2025-11-25 14:45:50,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:46:43] 2025-11-25 14:45:50,183 | INFO     | collected zombie processes
[2025-11-25 15:46:43] 2025-11-25 14:45:50,183 | INFO     | will attempt to kill all subprocesses of pid=17738
[2025-11-25 15:46:43] 2025-11-25 14:45:50,303 | INFO     | process IDs to be killed: [17738] (in reverse order)
[2025-11-25 15:46:43] 2025-11-25 14:45:50,371 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:46:43] 2025-11-25 14:45:50,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:46:43] 2025-11-25 14:45:50,375 | INFO     | did not find any defunct processes belonging to 17738
[2025-11-25 15:46:43] 2025-11-25 14:45:50,380 | INFO     | did not find any defunct processes belonging to 17738
[2025-11-25 15:46:43] 2025-11-25 14:45:50,383 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:46:43] 2025-11-25 14:45:50,383 | INFO     | ready for new job
[2025-11-25 15:46:43] 2025-11-25 14:45:50,383 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:46:43] 2025-11-25 14:45:50,390 | INFO     | ***************************************
[2025-11-25 15:46:43] 2025-11-25 14:45:50,390 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:46:43] 2025-11-25 14:45:50,390 | INFO     | ***************************************
[2025-11-25 15:46:43] 2025-11-25 14:45:50,391 | INFO     | 
[2025-11-25 15:46:43] 2025-11-25 14:45:50,391 | INFO     | pilot is running in a VM
[2025-11-25 15:46:43] 2025-11-25 14:45:50,391 | INFO     | architecture information:
[2025-11-25 15:46:43] 2025-11-25 14:45:50,392 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:46:43] 2025-11-25 14:45:50,414 | INFO     | cat /etc/os-release:
[2025-11-25 15:46:43] NAME="CentOS Linux"
[2025-11-25 15:46:43] VERSION="7 (Core)"
[2025-11-25 15:46:43] ID="centos"
[2025-11-25 15:46:43] ID_LIKE="rhel fedora"
[2025-11-25 15:46:43] VERSION_ID="7"
[2025-11-25 15:46:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:46:43] ANSI_COLOR="0;31"
[2025-11-25 15:46:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:46:43] HOME_URL="https://www.centos.org/"
[2025-11-25 15:46:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:46:43] 
[2025-11-25 15:46:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:46:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:46:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:46:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:46:43] 
[2025-11-25 15:46:43] 2025-11-25 14:45:50,415 | INFO     | ***************************************
[2025-11-25 15:46:43] 2025-11-25 14:45:50,918 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-25 15:46:43] 2025-11-25 14:45:51,098 | INFO     | sufficient remaining disk space (495068381184 B)
[2025-11-25 15:46:43] 2025-11-25 14:45:51,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:46:43] 2025-11-25 14:45:51,099 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:46:43] 2025-11-25 14:45:51,099 | INFO     | update_server=False
[2025-11-25 15:46:43] 2025-11-25 14:45:51,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:46:43] 2025-11-25 14:45:51,099 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:43] 2025-11-25 14:45:51,100 | INFO     | aborting loop
[2025-11-25 15:46:43] 2025-11-25 14:45:51,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:46:43] 2025-11-25 14:45:51,114 | INFO     | all data control threads have been joined
[2025-11-25 15:46:43] 2025-11-25 14:45:51,375 | INFO     | all payload control threads have been joined
[2025-11-25 15:46:43] 2025-11-25 14:45:52,105 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:52,106 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:52,121 | INFO     | [data] control thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:52,181 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:52,315 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:52,382 | INFO     | [payload] control thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:52,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:46:43] 2025-11-25 14:45:52,402 | INFO     | all job control threads have been joined
[2025-11-25 15:46:43] 2025-11-25 14:45:52,682 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:53,109 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:53,181 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:53,226 | INFO     | [job] validate thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:53,229 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:53,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:53,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:43] 2025-11-25 14:45:53,409 | INFO     | [job] control thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:53,505 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:54,382 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:45:56,399 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:46:43] 2025-11-25 14:46:22,221 | INFO     | PID=11222 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 15:46:43] 2025-11-25 14:46:22,222 | INFO     | .. there are 9 such processes running
[2025-11-25 15:46:43] 2025-11-25 14:46:22,222 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:46:43] 2025-11-25 14:46:22,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:46:43] 2025-11-25 14:46:22,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:46:43] 2025-11-25 14:46:33,451 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:46:43] 2025-11-25 14:46:34,182 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663206315840)>', '<ExcThread(monitor, started 139662899259136)>']
[2025-11-25 15:46:43] 2025-11-25 14:46:34,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:46:43] 2025-11-25 14:46:34,293 | INFO     | [monitor] control thread has ended
[2025-11-25 15:46:43] 2025-11-25 14:46:39,207 | INFO     | all workflow threads have been joined
[2025-11-25 15:46:43] 2025-11-25 14:46:39,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:46:43] 2025-11-25 14:46:39,208 | INFO     | traces error code: 0
[2025-11-25 15:46:43] 2025-11-25 14:46:39,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:46:43] 2025-11-25 14:46:39,661 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:46:43] 2025-11-25 14:46:39,735 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:46:43] 2025-11-25 14:46:39,822 [wrapper] pilotpid: 11222
[2025-11-25 15:46:43] 2025-11-25 14:46:39,918 [wrapper] Pilot exit status: 0
[2025-11-25 15:46:43] 2025-11-25 14:46:40,163 [wrapper] pandaids: 6894258284
[2025-11-25 15:46:43] 2025-11-25 14:46:40,979 [wrapper] cleanup supervisor_pilot 28215 11223
[2025-11-25 15:46:43] 2025-11-25 14:46:41,011 [wrapper] Test setup, not cleaning
[2025-11-25 15:46:43] 2025-11-25 14:46:41,088 [wrapper] apfmon messages muted
[2025-11-25 15:46:43] 2025-11-25 14:46:41,152 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:46:43] 2025-11-25 14:46:41,201 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:46:43]  *** Error codes and diagnostics ***
[2025-11-25 15:46:43]     "exeErrorCode": 0,
[2025-11-25 15:46:43]     "exeErrorDiag": "",
[2025-11-25 15:46:43]     "pilotErrorCode": 0,
[2025-11-25 15:46:43]     "pilotErrorDiag": "",
[2025-11-25 15:46:43]  *** Listing of results directory ***
[2025-11-25 15:46:43] total 1346896
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc    576529 Nov 21 04:09 pilot3.tar.gz
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc      5112 Nov 21 04:54 queuedata.json
[2025-11-25 15:46:43] -rwx------. 1 boinc boinc     36292 Nov 21 04:55 runpilot2-wrapper.sh
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc       100 Nov 24 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:46:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 13:43 run_atlas
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc       105 Nov 24 13:43 job.xml
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc      6391 Nov 24 13:43 init_data.xml
[2025-11-25 15:46:43] -rw-r--r--. 2 boinc boinc 411176860 Nov 24 13:43 EVNT.47493127._002174.pool.root.1
[2025-11-25 15:46:43] -rw-r--r--. 2 boinc boinc     15847 Nov 24 13:43 start_atlas.sh
[2025-11-25 15:46:43] drwxrwx--x. 2 boinc boinc        68 Nov 24 13:43 shared
[2025-11-25 15:46:43] -rw-r--r--. 2 boinc boinc    590108 Nov 24 13:43 input.tar.gz
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc         0 Nov 24 13:43 boinc_lockfile
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc      2785 Nov 24 13:43 pandaJob.out
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc    988279 Nov 24 13:47 agis_schedconf.cvmfs.json
[2025-11-25 15:46:43] drwx------. 5 boinc boinc      4096 Nov 24 13:47 pilot3
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc       533 Nov 25 15:19 boinc_task_state.xml
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc 934199649 Nov 25 15:43 HITS.47533967._001458.pool.root.1
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc      1031 Nov 25 15:44 memory_monitor_summary.json
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc   1516240 Nov 25 15:44 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc   2566607 Nov 25 15:44 log.47533967._001458.job.log.tgz.1
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc        95 Nov 25 15:45 pilot_heartbeat.json
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc      8630 Nov 25 15:45 heartbeat.json
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc      8192 Nov 25 15:46 boinc_mmap_file
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc        29 Nov 25 15:46 wrapper_checkpoint.txt
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc      4884 Nov 25 15:46 pilotlog.txt
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc  12403428 Nov 25 15:46 log.47533967._001458.job.log.1
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc       353 Nov 25 15:46 output.list
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc       620 Nov 25 15:46 runtime_log
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc  14991360 Nov 25 15:46 result.tar.gz
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc      8817 Nov 25 15:46 runtime_log.err
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc       662 Nov 25 15:46 ntgMDmUQXg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUIHKDmCPki1m.diag
[2025-11-25 15:46:43] -rw-r--r--. 1 boinc boinc     21445 Nov 25 15:46 stderr.txt
[2025-11-25 15:46:43] HITS file was successfully produced:
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc 934199649 Nov 25 15:43 shared/HITS.pool.root.1
[2025-11-25 15:46:43]  *** Contents of shared directory: ***
[2025-11-25 15:46:43] total 1329084
[2025-11-25 15:46:43] -rw-r--r--. 2 boinc boinc 411176860 Nov 24 13:43 ATLAS.root_0
[2025-11-25 15:46:43] -rw-r--r--. 2 boinc boinc     15847 Nov 24 13:43 start_atlas.sh
[2025-11-25 15:46:43] -rw-r--r--. 2 boinc boinc    590108 Nov 24 13:43 input.tar.gz
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc 934199649 Nov 25 15:43 HITS.pool.root.1
[2025-11-25 15:46:43] -rw-------. 1 boinc boinc  14991360 Nov 25 15:46 result.tar.gz
15:46:44 (7322): run_atlas exited; CPU time 348837.466396
15:46:44 (7322): called boinc_finish(0)

</stderr_txt>
]]>

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