Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:02:04 (1159530): wrapper (7.7.26015): starting
10:02:04 (1159530): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 10:02:04] Arguments: --nthreads 3
[2025-11-24 10:02:04] Threads: 3
[2025-11-24 10:02:04] Checking for CVMFS
[2025-11-24 10:02:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:02:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:02:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:02:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:02:04] 2.9.2.0 56377 8248 88552 153239 1 81 32819507 36864001 0 130560 0 3049153 99.916 456564 5384 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 10:02:04] CVMFS is ok
[2025-11-24 10:02:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:02:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:02:04] Further information can be found at the LHC@home message board.
[2025-11-24 10:02:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:02:04] Checking for apptainer binary...
[2025-11-24 10:02:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:02:04] Running /usr/bin/apptainer --version
[2025-11-24 10:02:04] apptainer version 1.4.1-1.1
[2025-11-24 10:02:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:02:04] belleA253
[2025-11-24 10:02:04] apptainer works
[2025-11-24 10:02:04] Set ATHENA_PROC_NUMBER=3
[2025-11-24 10:02:04] Set ATHENA_CORE_NUMBER=3
[2025-11-24 10:02:04] Starting ATLAS job with PandaID=6893886154
[2025-11-24 10:02:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 18:06:53]  *** The last 200 lines of the pilot log: ***
[2025-11-24 18:06:53] 2025-11-24 17:06:16,603 | INFO     | chi2: 0.07385509322525566
[2025-11-24 18:06:53] 2025-11-24 17:06:16,603 | INFO     | current memory leak: 4.57 B/s (using 445 data points, chi2=0.07)
[2025-11-24 18:06:53] 2025-11-24 17:06:16,606 | INFO     | could have reported an average CPU frequency of 4012 MHz (19 samples)
[2025-11-24 18:06:53] 2025-11-24 17:06:18,380 | INFO     | time since job start (29048s) is within the limit (172800.0s)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,066 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 18:06:53] 2025-11-24 17:06:19,067 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3768.308583333333
[2025-11-24 18:06:53] 2025-11-24 17:06:19,068 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6893886154/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,069 | INFO     | extracted standard info from prmon json
[2025-11-24 18:06:53] 2025-11-24 17:06:19,069 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 18:06:53] 2025-11-24 17:06:19,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 18:06:53] 2025-11-24 17:06:19,072 | INFO     | fitting pss+swap vs Time
[2025-11-24 18:06:53] 2025-11-24 17:06:19,072 | INFO     | sum of square deviations: 33442394475.0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,074 | INFO     | sum of deviations: 230076176325.50006
[2025-11-24 18:06:53] 2025-11-24 17:06:19,074 | INFO     | mean x: 1763989438.5
[2025-11-24 18:06:53] 2025-11-24 17:06:19,074 | INFO     | mean y: 2206394.2584033613
[2025-11-24 18:06:53] 2025-11-24 17:06:19,074 | INFO     | intersect: -12133645462.642635
[2025-11-24 18:06:53] 2025-11-24 17:06:19,074 | INFO     | chi2: 3.2767804720242513
[2025-11-24 18:06:53] 2025-11-24 17:06:19,075 | INFO     | sum of square deviations: 32399565620.0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,077 | INFO     | sum of deviations: 273958707960.00003
[2025-11-24 18:06:53] 2025-11-24 17:06:19,077 | INFO     | mean x: 1763989286.0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,077 | INFO     | mean y: 2212773.430997877
[2025-11-24 18:06:53] 2025-11-24 17:06:19,077 | INFO     | intersect: -14913426260.616117
[2025-11-24 18:06:53] 2025-11-24 17:06:19,077 | INFO     | chi2: 2.3961021963158156
[2025-11-24 18:06:53] 2025-11-24 17:06:19,077 | INFO     | current chi2=2.3961021963158156 (change=26.876328250466873 %)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,077 | INFO     | sum of square deviations: 31378644152.5
[2025-11-24 18:06:53] 2025-11-24 17:06:19,079 | INFO     | sum of deviations: 269702783039.00003
[2025-11-24 18:06:53] 2025-11-24 17:06:19,079 | INFO     | mean x: 1763989133.5
[2025-11-24 18:06:53] 2025-11-24 17:06:19,079 | INFO     | mean y: 2212137.721030043
[2025-11-24 18:06:53] 2025-11-24 17:06:19,079 | INFO     | intersect: -15159462032.882034
[2025-11-24 18:06:53] 2025-11-24 17:06:19,079 | INFO     | chi2: 2.3945085166166553
[2025-11-24 18:06:53] 2025-11-24 17:06:19,079 | INFO     | current chi2=2.3945085166166553 (change=0.0665113408606129 %)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,079 | INFO     | right removable region: 465
[2025-11-24 18:06:53] 2025-11-24 17:06:19,080 | INFO     | sum of square deviations: 32399565620.0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,081 | INFO     | sum of deviations: 130804640631.00014
[2025-11-24 18:06:53] 2025-11-24 17:06:19,081 | INFO     | mean x: 1763989591.0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,081 | INFO     | mean y: 2220889.407643312
[2025-11-24 18:06:53] 2025-11-24 17:06:19,081 | INFO     | intersect: -7119418555.818349
[2025-11-24 18:06:53] 2025-11-24 17:06:19,082 | INFO     | chi2: 1.203629872004991
[2025-11-24 18:06:53] 2025-11-24 17:06:19,082 | INFO     | current chi2=1.203629872004991 (change=63.267912443904386 %)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,082 | INFO     | sum of square deviations: 31378644152.5
[2025-11-24 18:06:53] 2025-11-24 17:06:19,083 | INFO     | sum of deviations: 105202977871.5
[2025-11-24 18:06:53] 2025-11-24 17:06:19,084 | INFO     | mean x: 1763989743.5
[2025-11-24 18:06:53] 2025-11-24 17:06:19,084 | INFO     | mean y: 2224695.9034334766
[2025-11-24 18:06:53] 2025-11-24 17:06:19,084 | INFO     | intersect: -5911892340.163537
[2025-11-24 18:06:53] 2025-11-24 17:06:19,084 | INFO     | chi2: 0.9790444236108515
[2025-11-24 18:06:53] 2025-11-24 17:06:19,084 | INFO     | current chi2=0.9790444236108515 (change=18.659012510218602 %)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,084 | INFO     | left removable region: 20
[2025-11-24 18:06:53] 2025-11-24 17:06:19,084 | INFO     | sum of square deviations: 27324754190.0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | sum of deviations: 124811337987.99998
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | mean x: 1763989713.0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | mean y: 2234324.973033708
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | intersect: -8055145249.082636
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | chi2: 0.07385509322525566
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | current memory leak: 4.57 B/s (using 445 data points, chi2=0.07)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | could have reported an average CPU frequency of 4000 MHz (20 samples)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | ..............................
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | . Timing measurements:
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | . get job = 0 s
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | . initial setup = 1 s
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | . payload setup = 3 s
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | . stage-in = 0 s
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | . payload execution = 29018 s
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | . stage-out = 1 s
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | . log creation = 0 s
[2025-11-24 18:06:53] 2025-11-24 17:06:19,086 | INFO     | ..............................
[2025-11-24 18:06:53] 2025-11-24 17:06:19,318 | INFO     | 
[2025-11-24 18:06:53] 2025-11-24 17:06:19,318 | INFO     | job summary report
[2025-11-24 18:06:53] 2025-11-24 17:06:19,318 | INFO     | --------------------------------------------------
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | PanDA job id: 6893886154
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | task id: 47523449
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | errors: (none)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | pilot state: finished 
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | transexitcode: 0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | exeerrorcode: 0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | exeerrordiag: 
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | exitcode: 0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | exitmsg: OK
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | cpuconsumptiontime: 85758 s
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | nevents: 1000
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | neventsw: 0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | pid: 1169720
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | pgrp: 1169720
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | corecount: 3
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | event service: False
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | sizes: {0: 2298759, 2: 2299021, 10: 2299049, 29025: 2338041, 29026: 2347832, 29028: 2347888, 29035: 2348286}
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | --------------------------------------------------
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | 
[2025-11-24 18:06:53] 2025-11-24 17:06:19,319 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 18:06:53] 2025-11-24 17:06:19,336 | INFO     | job 6893886154 has completed (purged errors)
[2025-11-24 18:06:53] 2025-11-24 17:06:19,336 | INFO     | overall cleanup function is called
[2025-11-24 18:06:53] 2025-11-24 17:06:20,342 | INFO     | --- collectZombieJob: --- 10, [1169720]
[2025-11-24 18:06:53] 2025-11-24 17:06:20,343 | INFO     | zombie collector waiting for pid 1169720
[2025-11-24 18:06:53] 2025-11-24 17:06:20,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 18:06:53] 2025-11-24 17:06:20,343 | INFO     | collected zombie processes
[2025-11-24 18:06:53] 2025-11-24 17:06:20,343 | INFO     | will attempt to kill all subprocesses of pid=1169720
[2025-11-24 18:06:53] 2025-11-24 17:06:20,386 | INFO     | process IDs to be killed: [1169720] (in reverse order)
[2025-11-24 18:06:53] 2025-11-24 17:06:20,412 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 18:06:53] 2025-11-24 17:06:20,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 18:06:53] 2025-11-24 17:06:20,413 | INFO     | did not find any defunct processes belonging to 1169720
[2025-11-24 18:06:53] 2025-11-24 17:06:20,414 | INFO     | did not find any defunct processes belonging to 1169720
[2025-11-24 18:06:53] 2025-11-24 17:06:20,415 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 18:06:53] 2025-11-24 17:06:20,415 | INFO     | ready for new job
[2025-11-24 18:06:53] 2025-11-24 17:06:20,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 18:06:53] 2025-11-24 17:06:20,416 | INFO     | ***************************************
[2025-11-24 18:06:53] 2025-11-24 17:06:20,416 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 18:06:53] 2025-11-24 17:06:20,416 | INFO     | ***************************************
[2025-11-24 18:06:53] 2025-11-24 17:06:20,416 | INFO     | 
[2025-11-24 18:06:53] 2025-11-24 17:06:20,416 | INFO     | architecture information:
[2025-11-24 18:06:53] 2025-11-24 17:06:20,417 | INFO     | executing command: cat /etc/os-release
[2025-11-24 18:06:53] 2025-11-24 17:06:20,426 | INFO     | cat /etc/os-release:
[2025-11-24 18:06:53] NAME="CentOS Linux"
[2025-11-24 18:06:53] VERSION="7 (Core)"
[2025-11-24 18:06:53] ID="centos"
[2025-11-24 18:06:53] ID_LIKE="rhel fedora"
[2025-11-24 18:06:53] VERSION_ID="7"
[2025-11-24 18:06:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 18:06:53] ANSI_COLOR="0;31"
[2025-11-24 18:06:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 18:06:53] HOME_URL="https://www.centos.org/"
[2025-11-24 18:06:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 18:06:53] 
[2025-11-24 18:06:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 18:06:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 18:06:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 18:06:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 18:06:53] 
[2025-11-24 18:06:53] 2025-11-24 17:06:20,426 | INFO     | ***************************************
[2025-11-24 18:06:53] 2025-11-24 17:06:20,929 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 18:06:53] 2025-11-24 17:06:20,943 | INFO     | sufficient remaining disk space (368670932992 B)
[2025-11-24 18:06:53] 2025-11-24 17:06:20,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 18:06:53] 2025-11-24 17:06:20,943 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 18:06:53] 2025-11-24 17:06:20,943 | INFO     | update_server=False
[2025-11-24 18:06:53] 2025-11-24 17:06:20,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 18:06:53] 2025-11-24 17:06:20,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 18:06:53] 2025-11-24 17:06:20,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:06:53] 2025-11-24 17:06:20,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:06:53] 2025-11-24 17:06:20,944 | INFO     | aborting loop
[2025-11-24 18:06:53] 2025-11-24 17:06:21,187 | INFO     | all payload control threads have been joined
[2025-11-24 18:06:53] 2025-11-24 17:06:21,532 | INFO     | all job control threads have been joined
[2025-11-24 18:06:53] 2025-11-24 17:06:21,786 | INFO     | all data control threads have been joined
[2025-11-24 18:06:53] 2025-11-24 17:06:21,949 | INFO     | [job] retrieve thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:21,949 | INFO     | [job] queue monitor thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:21,949 | INFO     | [job] job monitor thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:22,080 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:22,193 | INFO     | [payload] control thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:22,313 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:22,538 | INFO     | [job] control thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:22,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:22,791 | INFO     | [data] control thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:22,949 | INFO     | [data] copytool_out thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:22,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 18:06:53] 2025-11-24 17:06:23,114 | INFO     | [data] copytool_in thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:23,149 | INFO     | [payload] validate_post thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:23,235 | INFO     | [job] validate thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:23,240 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:23,373 | INFO     | [payload] failed_post thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:26,958 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 18:06:53] 2025-11-24 17:06:46,759 | INFO     | [monitor] cgroup control has ended
[2025-11-24 18:06:53] 2025-11-24 17:06:47,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140042419771200)>', '<ExcThread(monitor, started 140041544255232)>']
[2025-11-24 18:06:53] 2025-11-24 17:06:51,519 | INFO     | PID=1163260 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 18:06:53] 2025-11-24 17:06:51,519 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 18:06:53] 2025-11-24 17:06:51,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 18:06:53] 2025-11-24 17:06:51,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 18:06:53] 2025-11-24 17:06:51,519 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 18:06:53] 2025-11-24 17:06:51,519 | INFO     | [monitor] control thread has ended
[2025-11-24 18:06:53] 2025-11-24 17:06:52,991 | INFO     | all workflow threads have been joined
[2025-11-24 18:06:53] 2025-11-24 17:06:52,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 18:06:53] 2025-11-24 17:06:52,992 | INFO     | traces error code: 0
[2025-11-24 18:06:53] 2025-11-24 17:06:52,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 18:06:53] 2025-11-24 17:06:53,043 [wrapper] ==== pilot stdout END ====
[2025-11-24 18:06:53] 2025-11-24 17:06:53,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 18:06:53] 2025-11-24 17:06:53,048 [wrapper] pilotpid: 1163260
[2025-11-24 18:06:53] 2025-11-24 17:06:53,051 [wrapper] Pilot exit status: 0
[2025-11-24 18:06:53] 2025-11-24 17:06:53,058 [wrapper] pandaids: 6893886154
[2025-11-24 18:06:53] 2025-11-24 17:06:53,075 [wrapper] cleanup supervisor_pilot 1220263 1163261
[2025-11-24 18:06:53] 2025-11-24 17:06:53,078 [wrapper] Test setup, not cleaning
[2025-11-24 18:06:53] 2025-11-24 17:06:53,081 [wrapper] apfmon messages muted
[2025-11-24 18:06:53] 2025-11-24 17:06:53,083 [wrapper] ==== wrapper stdout END ====
[2025-11-24 18:06:53] 2025-11-24 17:06:53,086 [wrapper] ==== wrapper stderr END ====
[2025-11-24 18:06:53]  *** Error codes and diagnostics ***
[2025-11-24 18:06:53]     "exeErrorCode": 0,
[2025-11-24 18:06:53]     "exeErrorDiag": "",
[2025-11-24 18:06:53]     "pilotErrorCode": 0,
[2025-11-24 18:06:53]     "pilotErrorDiag": "",
[2025-11-24 18:06:53]  *** Listing of results directory ***
[2025-11-24 18:06:53] total 1312204
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc    598293 Nov  6 09:41 pilot3.tar.gz
[2025-11-24 18:06:53] -rwx------ 1 boinc boinc     36292 Nov 20 23:38 runpilot2-wrapper.sh
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc      5112 Nov 20 23:38 queuedata.json
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc       100 Nov 24 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 18:06:53] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 10:02 run_atlas
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc       105 Nov 24 10:02 job.xml
[2025-11-24 18:06:53] -rw-r--r-- 2 boinc boinc 410201642 Nov 24 10:02 EVNT.47493127._000955.pool.root.1
[2025-11-24 18:06:53] -rw-r--r-- 2 boinc boinc    611275 Nov 24 10:02 input.tar.gz
[2025-11-24 18:06:53] -rw-r--r-- 2 boinc boinc     15847 Nov 24 10:02 start_atlas.sh
[2025-11-24 18:06:53] drwxrwx--x 2 boinc boinc      4096 Nov 24 10:02 shared
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc         0 Nov 24 10:02 boinc_setup_complete
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc      6448 Nov 24 10:02 init_data.xml
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc         0 Nov 24 10:02 boinc_lockfile
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc      2785 Nov 24 10:02 pandaJob.out
[2025-11-24 18:06:53] -rw------- 1 boinc boinc    989794 Nov 24 10:02 agis_schedconf.cvmfs.json
[2025-11-24 18:06:53] drwx------ 7 boinc boinc      4096 Nov 24 10:02 pilot3
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc       531 Nov 24 18:02 boinc_task_state.xml
[2025-11-24 18:06:53] -rw------- 1 boinc boinc 919007670 Nov 24 18:05 HITS.47523449._009549.pool.root.1
[2025-11-24 18:06:53] -rw------- 1 boinc boinc      1028 Nov 24 18:06 memory_monitor_summary.json
[2025-11-24 18:06:53] -rw------- 1 boinc boinc   1516227 Nov 24 18:06 agis_ddmendpoints.agis.ALL.json
[2025-11-24 18:06:53] -rw------- 1 boinc boinc   1171460 Nov 24 18:06 log.47523449._009549.job.log.tgz.1
[2025-11-24 18:06:53] -rw------- 1 boinc boinc      8574 Nov 24 18:06 heartbeat.json
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc        28 Nov 24 18:06 wrapper_checkpoint.txt
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc      8192 Nov 24 18:06 boinc_mmap_file
[2025-11-24 18:06:53] -rw------- 1 boinc boinc        95 Nov 24 18:06 pilot_heartbeat.json
[2025-11-24 18:06:53] -rw------- 1 boinc boinc      4752 Nov 24 18:06 pilotlog.txt
[2025-11-24 18:06:53] -rw------- 1 boinc boinc   4093585 Nov 24 18:06 log.47523449._009549.job.log.1
[2025-11-24 18:06:53] -rw------- 1 boinc boinc       353 Nov 24 18:06 output.list
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc       620 Nov 24 18:06 runtime_log
[2025-11-24 18:06:53] -rw------- 1 boinc boinc   5283840 Nov 24 18:06 result.tar.gz
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc      8913 Nov 24 18:06 runtime_log.err
[2025-11-24 18:06:53] -rw------- 1 boinc boinc       668 Nov 24 18:06 FcyKDmXTSg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmi8GKDmDaNFXn.diag
[2025-11-24 18:06:53] -rw-r--r-- 1 boinc boinc     21230 Nov 24 18:06 stderr.txt
[2025-11-24 18:06:53] HITS file was successfully produced:
[2025-11-24 18:06:53] -rw------- 1 boinc boinc 919007670 Nov 24 18:05 shared/HITS.pool.root.1
[2025-11-24 18:06:53]  *** Contents of shared directory: ***
[2025-11-24 18:06:53] total 1303840
[2025-11-24 18:06:53] -rw-r--r-- 2 boinc boinc 410201642 Nov 24 10:02 ATLAS.root_0
[2025-11-24 18:06:53] -rw-r--r-- 2 boinc boinc    611275 Nov 24 10:02 input.tar.gz
[2025-11-24 18:06:53] -rw-r--r-- 2 boinc boinc     15847 Nov 24 10:02 start_atlas.sh
[2025-11-24 18:06:53] -rw------- 1 boinc boinc 919007670 Nov 24 18:05 HITS.pool.root.1
[2025-11-24 18:06:53] -rw------- 1 boinc boinc   5283840 Nov 24 18:06 result.tar.gz
18:06:54 (1159530): run_atlas exited; CPU time 85778.697037
18:06:54 (1159530): called boinc_finish(0)

</stderr_txt>
]]>

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