Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:48:16 (2621711): wrapper (7.7.26015): starting
20:48:16 (2621711): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 20:48:16] Arguments: --nthreads 4
[2025-11-21 20:48:16] Threads: 4
[2025-11-21 20:48:16] Checking for CVMFS
[2025-11-21 20:48:16] No cvmfs_config command found, will try listing directly
[2025-11-21 20:48:16] CVMFS is ok
[2025-11-21 20:48:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 20:48:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 20:48:17] Further information can be found at the LHC@home message board.
[2025-11-21 20:48:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 20:48:17] Checking for apptainer binary...
[2025-11-21 20:48:17] which: no apptainer in ((null))
[2025-11-21 20:48:17] apptainer is not installed, using version from CVMFS
[2025-11-21 20:48:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 20:48:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-21 20:48:17] apptainer works
[2025-11-21 20:48:17] Set ATHENA_PROC_NUMBER=4
[2025-11-21 20:48:17] Set ATHENA_CORE_NUMBER=4
[2025-11-21 20:48:17] Starting ATLAS job with PandaID=6894257927
[2025-11-21 20:48:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 13:02:23]  *** The last 200 lines of the pilot log: ***
[2025-11-22 13:02:23] 2025-11-22 11:59:01,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,094 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 13:02:23] 2025-11-22 11:59:02,116 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2733.40153125
[2025-11-22 13:02:23] 2025-11-22 11:59:02,141 | INFO     | using path: /scratch/boinc/var/slot124/slots/1/PanDA_Pilot-6894257927/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,142 | INFO     | extracted standard info from prmon json
[2025-11-22 13:02:23] 2025-11-22 11:59:02,142 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 13:02:23] 2025-11-22 11:59:02,142 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 13:02:23] 2025-11-22 11:59:02,158 | INFO     | fitting pss+swap vs Time
[2025-11-22 13:02:23] 2025-11-22 11:59:02,159 | INFO     | sum of square deviations: 269229764242.5
[2025-11-22 13:02:23] 2025-11-22 11:59:02,182 | INFO     | sum of deviations: 1015294830123.0004
[2025-11-22 13:02:23] 2025-11-22 11:59:02,182 | INFO     | mean x: 1763783613.5
[2025-11-22 13:02:23] 2025-11-22 11:59:02,182 | INFO     | mean y: 2288611.1006289306
[2025-11-22 13:02:23] 2025-11-22 11:59:02,182 | INFO     | intersect: -6649131930.311891
[2025-11-22 13:02:23] 2025-11-22 11:59:02,183 | INFO     | chi2: 3.69230410759884
[2025-11-22 13:02:23] 2025-11-22 11:59:02,184 | INFO     | sum of square deviations: 265018736450.0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,207 | INFO     | sum of deviations: 1184466108468.0002
[2025-11-22 13:02:23] 2025-11-22 11:59:02,207 | INFO     | mean x: 1763783461.0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,207 | INFO     | mean y: 2294731.3909378294
[2025-11-22 13:02:23] 2025-11-22 11:59:02,208 | INFO     | intersect: -7880701619.038953
[2025-11-22 13:02:23] 2025-11-22 11:59:02,209 | INFO     | chi2: 2.0132324928938834
[2025-11-22 13:02:23] 2025-11-22 11:59:02,209 | INFO     | current chi2=2.0132324928938834 (change=45.474900381292855 %)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,210 | INFO     | sum of square deviations: 260851849020.0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,231 | INFO     | sum of deviations: 1206340566764.9998
[2025-11-22 13:02:23] 2025-11-22 11:59:02,231 | INFO     | mean x: 1763783308.5
[2025-11-22 13:02:23] 2025-11-22 11:59:02,231 | INFO     | mean y: 2295529.2012711866
[2025-11-22 13:02:23] 2025-11-22 11:59:02,231 | INFO     | intersect: -8154531282.723685
[2025-11-22 13:02:23] 2025-11-22 11:59:02,232 | INFO     | chi2: 1.9143555942012567
[2025-11-22 13:02:23] 2025-11-22 11:59:02,233 | INFO     | current chi2=1.9143555942012567 (change=4.911350231115035 %)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,233 | INFO     | right removable region: 943
[2025-11-22 13:02:23] 2025-11-22 11:59:02,234 | INFO     | sum of square deviations: 265018736450.0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,256 | INFO     | sum of deviations: 841740428498.0001
[2025-11-22 13:02:23] 2025-11-22 11:59:02,257 | INFO     | mean x: 1763783766.0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,257 | INFO     | mean y: 2294884.7766069546
[2025-11-22 13:02:23] 2025-11-22 11:59:02,257 | INFO     | intersect: -5599754701.822185
[2025-11-22 13:02:23] 2025-11-22 11:59:02,258 | INFO     | chi2: 1.867168179376751
[2025-11-22 13:02:23] 2025-11-22 11:59:02,258 | INFO     | current chi2=1.867168179376751 (change=49.43081271301356 %)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,259 | INFO     | sum of square deviations: 260851849020.0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,280 | INFO     | sum of deviations: 826831824941.0005
[2025-11-22 13:02:23] 2025-11-22 11:59:02,281 | INFO     | mean x: 1763783918.5
[2025-11-22 13:02:23] 2025-11-22 11:59:02,281 | INFO     | mean y: 2295429.7711864407
[2025-11-22 13:02:23] 2025-11-22 11:59:02,281 | INFO     | intersect: -5588436173.680585
[2025-11-22 13:02:23] 2025-11-22 11:59:02,282 | INFO     | chi2: 1.8655053970992537
[2025-11-22 13:02:23] 2025-11-22 11:59:02,282 | INFO     | current chi2=1.8655053970992537 (change=0.08905369617279484 %)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,282 | INFO     | left removable region: 20
[2025-11-22 13:02:23] 2025-11-22 11:59:02,283 | INFO     | sum of square deviations: 243827686102.0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,304 | INFO     | sum of deviations: 1005820655749.0001
[2025-11-22 13:02:23] 2025-11-22 11:59:02,304 | INFO     | mean x: 1763783888.0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,304 | INFO     | mean y: 2302760.1213434455
[2025-11-22 13:02:23] 2025-11-22 11:59:02,304 | INFO     | intersect: -7273533282.901047
[2025-11-22 13:02:23] 2025-11-22 11:59:02,305 | INFO     | chi2: 0.06383791743861052
[2025-11-22 13:02:23] 2025-11-22 11:59:02,305 | INFO     | current memory leak: 4.13 B/s (using 923 data points, chi2=0.06)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,307 | INFO     | could have reported an average CPU frequency of 2681 MHz (36 samples)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,307 | INFO     | ..............................
[2025-11-22 13:02:23] 2025-11-22 11:59:02,307 | INFO     | . Timing measurements:
[2025-11-22 13:02:23] 2025-11-22 11:59:02,307 | INFO     | . get job = 0 s
[2025-11-22 13:02:23] 2025-11-22 11:59:02,307 | INFO     | . initial setup = 1 s
[2025-11-22 13:02:23] 2025-11-22 11:59:02,307 | INFO     | . payload setup = 9 s
[2025-11-22 13:02:23] 2025-11-22 11:59:02,307 | INFO     | . stage-in = 0 s
[2025-11-22 13:02:23] 2025-11-22 11:59:02,307 | INFO     | . payload execution = 58183 s
[2025-11-22 13:02:23] 2025-11-22 11:59:02,307 | INFO     | . stage-out = 3 s
[2025-11-22 13:02:23] 2025-11-22 11:59:02,308 | INFO     | . log creation = 0 s
[2025-11-22 13:02:23] 2025-11-22 11:59:02,308 | INFO     | ..............................
[2025-11-22 13:02:23] 2025-11-22 11:59:02,389 | INFO     | time since job start (58230s) is within the limit (172800.0s)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,405 | INFO     | 
[2025-11-22 13:02:23] 2025-11-22 11:59:02,405 | INFO     | job summary report
[2025-11-22 13:02:23] 2025-11-22 11:59:02,405 | INFO     | --------------------------------------------------
[2025-11-22 13:02:23] 2025-11-22 11:59:02,405 | INFO     | PanDA job id: 6894257927
[2025-11-22 13:02:23] 2025-11-22 11:59:02,405 | INFO     | task id: 47533967
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | errors: (none)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | pilot state: finished 
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | transexitcode: 0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | exeerrorcode: 0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | exeerrordiag: 
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | exitcode: 0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | exitmsg: OK
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | cpuconsumptiontime: 230244 s
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | nevents: 1000
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | neventsw: 0
[2025-11-22 13:02:23] 2025-11-22 11:59:02,406 | INFO     | pid: 2633376
[2025-11-22 13:02:23] 2025-11-22 11:59:02,407 | INFO     | pgrp: 2633376
[2025-11-22 13:02:23] 2025-11-22 11:59:02,407 | INFO     | corecount: 4
[2025-11-22 13:02:23] 2025-11-22 11:59:02,407 | INFO     | event service: False
[2025-11-22 13:02:23] 2025-11-22 11:59:02,407 | INFO     | sizes: {0: 2298819, 7: 2299081, 11: 2299109, 58197: 2353729, 58201: 2362747, 58204: 2362803, 58213: 2363177}
[2025-11-22 13:02:23] 2025-11-22 11:59:02,407 | INFO     | --------------------------------------------------
[2025-11-22 13:02:23] 2025-11-22 11:59:02,407 | INFO     | 
[2025-11-22 13:02:23] 2025-11-22 11:59:02,407 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/1
[2025-11-22 13:02:23] 2025-11-22 11:59:02,435 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,438 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 13:02:23] 2025-11-22 11:59:02,438 | INFO     | job 6894257927 has completed (purged errors)
[2025-11-22 13:02:23] 2025-11-22 11:59:02,438 | INFO     | overall cleanup function is called
[2025-11-22 13:02:23] 2025-11-22 11:59:03,455 | INFO     | --- collectZombieJob: --- 10, [2633376]
[2025-11-22 13:02:23] 2025-11-22 11:59:03,457 | INFO     | zombie collector waiting for pid 2633376
[2025-11-22 13:02:23] 2025-11-22 11:59:03,458 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 13:02:23] 2025-11-22 11:59:03,458 | INFO     | collected zombie processes
[2025-11-22 13:02:23] 2025-11-22 11:59:03,458 | INFO     | will attempt to kill all subprocesses of pid=2633376
[2025-11-22 13:02:23] 2025-11-22 11:59:05,617 | INFO     | PID=2626026 has CPU usage=30.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-22 13:02:23] 2025-11-22 11:59:05,617 | INFO     | .. there are 7 such processes running
[2025-11-22 13:02:23] 2025-11-22 11:59:05,631 | INFO     | process IDs to be killed: [2633376] (in reverse order)
[2025-11-22 13:02:23] 2025-11-22 11:59:05,865 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 13:02:23] 2025-11-22 11:59:05,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 13:02:23] 2025-11-22 11:59:05,902 | INFO     | did not find any defunct processes belonging to 2633376
[2025-11-22 13:02:23] 2025-11-22 11:59:05,943 | INFO     | did not find any defunct processes belonging to 2633376
[2025-11-22 13:02:23] 2025-11-22 11:59:05,945 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 13:02:23] 2025-11-22 11:59:05,945 | INFO     | ready for new job
[2025-11-22 13:02:23] 2025-11-22 11:59:05,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 13:02:23] 2025-11-22 11:59:05,952 | INFO     | ***************************************
[2025-11-22 13:02:23] 2025-11-22 11:59:05,953 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 13:02:23] 2025-11-22 11:59:05,953 | INFO     | ***************************************
[2025-11-22 13:02:23] 2025-11-22 11:59:05,953 | INFO     | 
[2025-11-22 13:02:23] 2025-11-22 11:59:05,962 | INFO     | architecture information:
[2025-11-22 13:02:23] 2025-11-22 11:59:05,963 | INFO     | executing command: cat /etc/os-release
[2025-11-22 13:02:23] 2025-11-22 11:59:05,990 | INFO     | cat /etc/os-release:
[2025-11-22 13:02:23] NAME="CentOS Linux"
[2025-11-22 13:02:23] VERSION="7 (Core)"
[2025-11-22 13:02:23] ID="centos"
[2025-11-22 13:02:23] ID_LIKE="rhel fedora"
[2025-11-22 13:02:23] VERSION_ID="7"
[2025-11-22 13:02:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 13:02:23] ANSI_COLOR="0;31"
[2025-11-22 13:02:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 13:02:23] HOME_URL="https://www.centos.org/"
[2025-11-22 13:02:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 13:02:23] 
[2025-11-22 13:02:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 13:02:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 13:02:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 13:02:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 13:02:23] 
[2025-11-22 13:02:23] 2025-11-22 11:59:05,991 | INFO     | ***************************************
[2025-11-22 13:02:23] 2025-11-22 11:59:06,494 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/1
[2025-11-22 13:02:23] 2025-11-22 11:59:06,515 | INFO     | sufficient remaining disk space (3299344384000 B)
[2025-11-22 13:02:23] 2025-11-22 11:59:06,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 13:02:23] 2025-11-22 11:59:06,515 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 13:02:23] 2025-11-22 11:59:06,516 | INFO     | update_server=False
[2025-11-22 13:02:23] 2025-11-22 11:59:06,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 13:02:23] 2025-11-22 11:59:06,516 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-22 13:02:23] 2025-11-22 11:59:06,516 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 13:02:23] 2025-11-22 11:59:06,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 13:02:23] 2025-11-22 11:59:06,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 13:02:23] 2025-11-22 11:59:06,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 13:02:23] 2025-11-22 11:59:06,974 | INFO     | all payload control threads have been joined
[2025-11-22 13:02:23] 2025-11-22 11:59:07,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 13:02:23] 2025-11-22 11:59:07,025 | INFO     | aborting loop
[2025-11-22 13:02:23] 2025-11-22 11:59:07,030 | INFO     | all job control threads have been joined
[2025-11-22 13:02:23] 2025-11-22 11:59:07,306 | INFO     | [monitor] cgroup control has ended
[2025-11-22 13:02:23] 2025-11-22 11:59:07,316 | INFO     | all data control threads have been joined
[2025-11-22 13:02:23] 2025-11-22 11:59:07,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 13:02:23] 2025-11-22 11:59:07,521 | INFO     | [job] retrieve thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:07,759 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:07,879 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:07,966 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:07,979 | INFO     | [payload] control thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:08,031 | INFO     | [job] job monitor thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:08,036 | INFO     | [job] control thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:08,208 | INFO     | [job] validate thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:08,322 | INFO     | [data] control thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:08,415 | INFO     | [job] queue monitor thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:08,521 | INFO     | [data] copytool_out thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:08,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:08,759 | INFO     | [data] copytool_in thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:08,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 13:02:23] 2025-11-22 11:59:09,037 | INFO     | [payload] failed_post thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:09,091 | INFO     | [payload] validate_post thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:12,842 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 13:02:23] 2025-11-22 11:59:13,523 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22941850347328)>', '<ExcThread(monitor, started 22941613917952)>']
[2025-11-22 13:02:23] 2025-11-22 11:59:13,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 13:02:23] 2025-11-22 11:59:13,548 | INFO     | [monitor] control thread has ended
[2025-11-22 13:02:23] 2025-11-22 11:59:18,547 | INFO     | all workflow threads have been joined
[2025-11-22 13:02:23] 2025-11-22 11:59:18,550 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 13:02:23] 2025-11-22 11:59:18,550 | INFO     | traces error code: 0
[2025-11-22 13:02:23] 2025-11-22 11:59:18,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 13:02:23] 2025-11-22 11:59:18,716 [wrapper] ==== pilot stdout END ====
[2025-11-22 13:02:23] 2025-11-22 11:59:18,720 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 13:02:23] 2025-11-22 11:59:18,724 [wrapper] pilotpid: 2626026
[2025-11-22 13:02:23] 2025-11-22 11:59:18,727 [wrapper] Pilot exit status: 0
[2025-11-22 13:02:23] 2025-11-22 11:59:18,741 [wrapper] pandaids: 6894257927
[2025-11-22 13:02:23] 2025-11-22 11:59:18,918 [wrapper] cleanup supervisor_pilot 3988083 2626027
[2025-11-22 13:02:23] 2025-11-22 11:59:18,922 [wrapper] Test setup, not cleaning
[2025-11-22 13:02:23] 2025-11-22 11:59:18,926 [wrapper] apfmon messages muted
[2025-11-22 13:02:23] 2025-11-22 11:59:18,929 [wrapper] ==== wrapper stdout END ====
[2025-11-22 13:02:23] 2025-11-22 11:59:18,932 [wrapper] ==== wrapper stderr END ====
[2025-11-22 13:02:23]  *** Error codes and diagnostics ***
[2025-11-22 13:02:23]     "exeErrorCode": 0,
[2025-11-22 13:02:23]     "exeErrorDiag": "",
[2025-11-22 13:02:23]     "pilotErrorCode": 0,
[2025-11-22 13:02:23]     "pilotErrorDiag": "",
[2025-11-22 13:02:23]  *** Listing of results directory ***
[2025-11-22 13:02:23] total 1338540
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc    576529 Nov 21 04:09 pilot3.tar.gz
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc      5112 Nov 21 04:37 queuedata.json
[2025-11-22 13:02:23] -rwx------ 1 boinc boinc     36292 Nov 21 04:39 runpilot2-wrapper.sh
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc       100 Nov 21 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 13:02:23] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 19:36 run_atlas
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc       105 Nov 21 19:36 job.xml
[2025-11-22 13:02:23] -rw-r--r-- 2 boinc boinc 409658868 Nov 21 20:48 EVNT.47493127._002168.pool.root.1
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc      6687 Nov 21 20:48 init_data.xml
[2025-11-22 13:02:23] -rw-r--r-- 2 boinc boinc     15847 Nov 21 20:48 start_atlas.sh
[2025-11-22 13:02:23] drwxrwx--x 2 boinc boinc      4096 Nov 21 20:48 shared
[2025-11-22 13:02:23] -rw-r--r-- 2 boinc boinc    590098 Nov 21 20:48 input.tar.gz
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc         0 Nov 21 20:48 boinc_lockfile
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc      2786 Nov 21 20:48 pandaJob.out
[2025-11-22 13:02:23] -rw------- 1 boinc boinc    989798 Nov 21 20:48 agis_schedconf.cvmfs.json
[2025-11-22 13:02:23] drwx------ 5 boinc boinc      4096 Nov 21 20:48 pilot3
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc       532 Nov 22 12:50 boinc_task_state.xml
[2025-11-22 13:02:23] -rw------- 1 boinc boinc 937639529 Nov 22 12:58 HITS.47533967._001392.pool.root.1
[2025-11-22 13:02:23] -rw------- 1 boinc boinc        95 Nov 22 12:58 pilot_heartbeat.json
[2025-11-22 13:02:23] -rw------- 1 boinc boinc      1039 Nov 22 12:58 memory_monitor_summary.json
[2025-11-22 13:02:23] -rw------- 1 boinc boinc   1526164 Nov 22 12:58 agis_ddmendpoints.agis.ALL.json
[2025-11-22 13:02:23] -rw------- 1 boinc boinc   1700906 Nov 22 12:58 log.47533967._001392.job.log.tgz.1
[2025-11-22 13:02:23] -rw------- 1 boinc boinc      8590 Nov 22 12:59 heartbeat.json
[2025-11-22 13:02:23] -rw------- 1 boinc boinc      4564 Nov 22 12:59 pilotlog.txt
[2025-11-22 13:02:23] -rw------- 1 boinc boinc   8020661 Nov 22 12:59 log.47533967._001392.job.log.1
[2025-11-22 13:02:23] -rw------- 1 boinc boinc       353 Nov 22 12:59 output.list
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc       620 Nov 22 12:59 runtime_log
[2025-11-22 13:02:23] -rw------- 1 boinc boinc   9738240 Nov 22 12:59 result.tar.gz
[2025-11-22 13:02:23] -rw------- 1 boinc boinc       670 Nov 22 12:59 xCKLDmdAXg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdyIKDmZ718In.diag
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc      9223 Nov 22 12:59 runtime_log.err
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc      8192 Nov 22 13:02 boinc_mmap_file
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc        28 Nov 22 13:02 wrapper_checkpoint.txt
[2025-11-22 13:02:23] -rw-r--r-- 1 boinc boinc     21088 Nov 22 13:02 stderr.txt
[2025-11-22 13:02:23] HITS file was successfully produced:
[2025-11-22 13:02:23] -rw------- 1 boinc boinc 937639529 Nov 22 12:58 shared/HITS.pool.root.1
[2025-11-22 13:02:23]  *** Contents of shared directory: ***
[2025-11-22 13:02:23] total 1325840
[2025-11-22 13:02:23] -rw-r--r-- 2 boinc boinc 409658868 Nov 21 20:48 ATLAS.root_0
[2025-11-22 13:02:23] -rw-r--r-- 2 boinc boinc     15847 Nov 21 20:48 start_atlas.sh
[2025-11-22 13:02:23] -rw-r--r-- 2 boinc boinc    590098 Nov 21 20:48 input.tar.gz
[2025-11-22 13:02:23] -rw------- 1 boinc boinc 937639529 Nov 22 12:58 HITS.pool.root.1
[2025-11-22 13:02:23] -rw------- 1 boinc boinc   9738240 Nov 22 12:59 result.tar.gz
13:02:25 (2621711): run_atlas exited; CPU time 233247.253132
13:02:25 (2621711): called boinc_finish(0)

</stderr_txt>
]]>

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