Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:57:58 (3941036): wrapper (7.7.26015): starting
12:57:58 (3941036): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 12:57:58] Arguments: --nthreads 8
[2025-11-21 12:57:58] Threads: 8
[2025-11-21 12:57:58] Checking for CVMFS
[2025-11-21 12:57:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 12:58:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 12:58:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 12:58:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 12:58:01] 2.13.2.0 5239 26867 165096 153138 1 104 26958977 39288833 7247 16776704 0 15814384 99.681 12512319 34325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 12:58:01] CVMFS is ok
[2025-11-21 12:58:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 12:58:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 12:58:01] Further information can be found at the LHC@home message board.
[2025-11-21 12:58:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 12:58:01] Checking for apptainer binary...
[2025-11-21 12:58:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 12:58:01] Running /usr/bin/apptainer --version
[2025-11-21 12:58:01] apptainer version 1.4.4-1.el9
[2025-11-21 12:58:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 12:58:01] c-210-6.aglt2.org
[2025-11-21 12:58:01] apptainer works
[2025-11-21 12:58:01] Set ATHENA_PROC_NUMBER=8
[2025-11-21 12:58:01] Set ATHENA_CORE_NUMBER=8
[2025-11-21 12:58:02] Starting ATLAS job with PandaID=6894257121
[2025-11-21 12:58:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 14:56:07]  *** The last 200 lines of the pilot log: ***
[2025-11-22 14:56:07] 2025-11-22 17:32:07,543 | INFO     | time since job start (84780s) is within the limit (172800.0s)
[2025-11-22 14:56:07] 2025-11-22 17:32:08,029 | INFO     | monitor loop #5459: job 0:6894257121 is in state 'finished'
[2025-11-22 14:56:07] 2025-11-22 17:32:08,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 14:56:07] 2025-11-22 17:32:08,757 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 14:56:07] 2025-11-22 17:32:08,764 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2591.7037750000004
[2025-11-22 14:56:07] 2025-11-22 17:32:08,770 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894257121/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 14:56:07] 2025-11-22 17:32:08,771 | INFO     | extracted standard info from prmon json
[2025-11-22 14:56:07] 2025-11-22 17:32:08,771 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 14:56:07] 2025-11-22 17:32:08,771 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 14:56:07] 2025-11-22 17:32:08,796 | INFO     | fitting pss+swap vs Time
[2025-11-22 14:56:07] 2025-11-22 17:32:08,798 | INFO     | sum of square deviations: 827334161013.7909
[2025-11-22 14:56:07] 2025-11-22 17:32:08,846 | INFO     | sum of deviations: 5611160404830.194
[2025-11-22 14:56:07] 2025-11-22 17:32:08,846 | INFO     | mean x: 1763790390.3770728
[2025-11-22 14:56:07] 2025-11-22 17:32:08,846 | INFO     | mean y: 2895623.672674838
[2025-11-22 14:56:07] 2025-11-22 17:32:08,846 | INFO     | intersect: -11959514811.279558
[2025-11-22 14:56:07] 2025-11-22 17:32:08,848 | INFO     | chi2: 14.12055634263802
[2025-11-22 14:56:07] 2025-11-22 17:32:08,850 | INFO     | sum of square deviations: 818419455217.9368
[2025-11-22 14:56:07] 2025-11-22 17:32:08,900 | INFO     | sum of deviations: 6062285152379.518
[2025-11-22 14:56:07] 2025-11-22 17:32:08,901 | INFO     | mean x: 1763790237.885673
[2025-11-22 14:56:07] 2025-11-22 17:32:08,901 | INFO     | mean y: 2903341.990593343
[2025-11-22 14:56:07] 2025-11-22 17:32:08,901 | INFO     | intersect: -13062034573.248632
[2025-11-22 14:56:07] 2025-11-22 17:32:08,903 | INFO     | chi2: 11.161472161714313
[2025-11-22 14:56:07] 2025-11-22 17:32:08,903 | INFO     | current chi2=11.161472161714313 (change=20.95586115108328 %)
[2025-11-22 14:56:07] 2025-11-22 17:32:08,903 | INFO     | right removable region: 1381
[2025-11-22 14:56:07] 2025-11-22 17:32:08,905 | INFO     | sum of square deviations: 818417444047.9358
[2025-11-22 14:56:07] 2025-11-22 17:32:08,962 | INFO     | sum of deviations: 5031725234968.786
[2025-11-22 14:56:07] 2025-11-22 17:32:08,963 | INFO     | mean x: 1763790542.885673
[2025-11-22 14:56:07] 2025-11-22 17:32:08,963 | INFO     | mean y: 2905533.403762663
[2025-11-22 14:56:07] 2025-11-22 17:32:08,963 | INFO     | intersect: -10841083006.162752
[2025-11-22 14:56:07] 2025-11-22 17:32:08,965 | INFO     | chi2: 9.619938192004529
[2025-11-22 14:56:07] 2025-11-22 17:32:08,965 | INFO     | current chi2=9.619938192004529 (change=31.87281040084487 %)
[2025-11-22 14:56:07] 2025-11-22 17:32:08,967 | INFO     | sum of square deviations: 809565091784.6638
[2025-11-22 14:56:07] 2025-11-22 17:32:09,041 | INFO     | sum of deviations: 4537606845467.274
[2025-11-22 14:56:07] 2025-11-22 17:32:09,041 | INFO     | mean x: 1763790695.3936093
[2025-11-22 14:56:07] 2025-11-22 17:32:09,042 | INFO     | mean y: 2914046.0530137983
[2025-11-22 14:56:07] 2025-11-22 17:32:09,042 | INFO     | intersect: -9883120831.940895
[2025-11-22 14:56:07] 2025-11-22 17:32:09,048 | INFO     | chi2: 6.489393077571358
[2025-11-22 14:56:07] 2025-11-22 17:32:09,048 | INFO     | current chi2=6.489393077571358 (change=32.54225808888334 %)
[2025-11-22 14:56:07] 2025-11-22 17:32:09,050 | INFO     | sum of square deviations: 800777457232.0961
[2025-11-22 14:56:07] 2025-11-22 17:32:09,135 | INFO     | sum of deviations: 4225965114452.5186
[2025-11-22 14:56:07] 2025-11-22 17:32:09,136 | INFO     | mean x: 1763790847.8957727
[2025-11-22 14:56:07] 2025-11-22 17:32:09,136 | INFO     | mean y: 2919451.2623906704
[2025-11-22 14:56:07] 2025-11-22 17:32:09,136 | INFO     | intersect: -9305182974.800022
[2025-11-22 14:56:07] 2025-11-22 17:32:09,140 | INFO     | chi2: 5.287439392368269
[2025-11-22 14:56:07] 2025-11-22 17:32:09,140 | INFO     | current chi2=5.287439392368269 (change=18.521819696163593 %)
[2025-11-22 14:56:07] 2025-11-22 17:32:09,140 | INFO     | left removable region: 30
[2025-11-22 14:56:07] 2025-11-22 17:32:09,142 | INFO     | sum of square deviations: 764567284572.2957
[2025-11-22 14:56:07] 2025-11-22 17:32:09,225 | INFO     | sum of deviations: 4446894234576.918
[2025-11-22 14:56:07] 2025-11-22 17:32:09,228 | INFO     | mean x: 1763791122.393042
[2025-11-22 14:56:07] 2025-11-22 17:32:09,228 | INFO     | mean y: 2934614.310880829
[2025-11-22 14:56:07] 2025-11-22 17:32:09,228 | INFO     | intersect: -10255668822.475222
[2025-11-22 14:56:07] 2025-11-22 17:32:09,230 | INFO     | chi2: 1.5335260601373377
[2025-11-22 14:56:07] 2025-11-22 17:32:09,230 | INFO     | current memory leak: 5.82 B/s (using 1351 data points, chi2=1.53)
[2025-11-22 14:56:07] 2025-11-22 17:32:09,232 | INFO     | could have reported an average CPU frequency of 2598 MHz (50 samples)
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | ..............................
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | . Timing measurements:
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | . get job = 0 s
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | . initial setup = 5 s
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | . payload setup = 56 s
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | . stage-in = 1 s
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | . payload execution = 84627 s
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | . stage-out = 4 s
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | . log creation = 1 s
[2025-11-22 14:56:07] 2025-11-22 17:32:09,233 | INFO     | ..............................
[2025-11-22 14:56:07] 2025-11-22 17:32:09,382 | INFO     | 
[2025-11-22 14:56:07] 2025-11-22 17:32:09,383 | INFO     | job summary report
[2025-11-22 14:56:07] 2025-11-22 17:32:09,383 | INFO     | --------------------------------------------------
[2025-11-22 14:56:07] 2025-11-22 17:32:09,383 | INFO     | PanDA job id: 6894257121
[2025-11-22 14:56:07] 2025-11-22 17:32:09,383 | INFO     | task id: 47533967
[2025-11-22 14:56:07] 2025-11-22 17:32:09,383 | INFO     | errors: (none)
[2025-11-22 14:56:07] 2025-11-22 17:32:09,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 14:56:07] 2025-11-22 17:32:09,383 | INFO     | pilot state: finished 
[2025-11-22 14:56:07] 2025-11-22 17:32:09,383 | INFO     | transexitcode: 0
[2025-11-22 14:56:07] 2025-11-22 17:32:09,384 | INFO     | exeerrorcode: 0
[2025-11-22 14:56:07] 2025-11-22 17:32:09,384 | INFO     | exeerrordiag: 
[2025-11-22 14:56:07] 2025-11-22 17:32:09,384 | INFO     | exitcode: 0
[2025-11-22 14:56:07] 2025-11-22 17:32:09,384 | INFO     | exitmsg: OK
[2025-11-22 14:56:07] 2025-11-22 17:32:09,384 | INFO     | cpuconsumptiontime: 295828 s
[2025-11-22 14:56:07] 2025-11-22 17:32:09,384 | INFO     | nevents: 1000
[2025-11-22 14:56:07] 2025-11-22 17:32:09,384 | INFO     | neventsw: 0
[2025-11-22 14:56:07] 2025-11-22 17:32:09,384 | INFO     | pid: 3955091
[2025-11-22 14:56:07] 2025-11-22 17:32:09,384 | INFO     | pgrp: 3955091
[2025-11-22 14:56:07] 2025-11-22 17:32:09,385 | INFO     | corecount: 8
[2025-11-22 14:56:07] 2025-11-22 17:32:09,385 | INFO     | event service: False
[2025-11-22 14:56:07] 2025-11-22 17:32:09,385 | INFO     | sizes: {0: 2297979, 1: 2298664, 2: 2298835, 3: 2298891, 14: 2298891, 25: 2298919, 33: 2299337, 36: 2299393, 84687: 2364875, 84688: 2364874, 84692: 2373924, 84696: 
[2025-11-22 14:56:07] 2025-11-22 17:32:09,385 | INFO     | --------------------------------------------------
[2025-11-22 14:56:07] 2025-11-22 17:32:09,385 | INFO     | 
[2025-11-22 14:56:07] 2025-11-22 17:32:09,385 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 14:56:07] 2025-11-22 17:32:09,431 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,431 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,434 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,439 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 14:56:07] 2025-11-22 17:32:09,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,439 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 14:56:07] 2025-11-22 17:32:09,439 | INFO     | job 6894257121 has completed (purged errors)
[2025-11-22 14:56:07] 2025-11-22 17:32:09,442 | INFO     | overall cleanup function is called
[2025-11-22 14:56:07] 2025-11-22 17:32:10,473 | INFO     | --- collectZombieJob: --- 10, [3955091]
[2025-11-22 14:56:07] 2025-11-22 17:32:10,476 | INFO     | zombie collector waiting for pid 3955091
[2025-11-22 14:56:07] 2025-11-22 17:32:10,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 14:56:07] 2025-11-22 17:32:10,476 | INFO     | collected zombie processes
[2025-11-22 14:56:07] 2025-11-22 17:32:10,477 | INFO     | will attempt to kill all subprocesses of pid=3955091
[2025-11-22 14:56:07] 2025-11-22 17:32:10,784 | INFO     | process IDs to be killed: [3955091] (in reverse order)
[2025-11-22 14:56:07] 2025-11-22 17:32:10,869 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 14:56:07] 2025-11-22 17:32:10,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 14:56:07] 2025-11-22 17:32:10,878 | INFO     | did not find any defunct processes belonging to 3955091
[2025-11-22 14:56:07] 2025-11-22 17:32:10,887 | INFO     | did not find any defunct processes belonging to 3955091
[2025-11-22 14:56:07] 2025-11-22 17:32:10,889 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 14:56:07] 2025-11-22 17:32:10,889 | INFO     | ready for new job
[2025-11-22 14:56:07] 2025-11-22 17:32:10,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 14:56:07] 2025-11-22 17:32:10,895 | INFO     | ***************************************
[2025-11-22 14:56:07] 2025-11-22 17:32:10,896 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 14:56:07] 2025-11-22 17:32:10,896 | INFO     | ***************************************
[2025-11-22 14:56:07] 2025-11-22 17:32:10,896 | INFO     | 
[2025-11-22 14:56:07] 2025-11-22 17:32:10,898 | INFO     | architecture information:
[2025-11-22 14:56:07] 2025-11-22 17:32:10,899 | INFO     | executing command: cat /etc/os-release
[2025-11-22 14:56:07] 2025-11-22 17:32:10,926 | INFO     | cat /etc/os-release:
[2025-11-22 14:56:07] NAME="CentOS Linux"
[2025-11-22 14:56:07] VERSION="7 (Core)"
[2025-11-22 14:56:07] ID="centos"
[2025-11-22 14:56:07] ID_LIKE="rhel fedora"
[2025-11-22 14:56:07] VERSION_ID="7"
[2025-11-22 14:56:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 14:56:07] ANSI_COLOR="0;31"
[2025-11-22 14:56:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 14:56:07] HOME_URL="https://www.centos.org/"
[2025-11-22 14:56:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 14:56:07] 
[2025-11-22 14:56:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 14:56:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 14:56:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 14:56:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 14:56:07] 
[2025-11-22 14:56:07] 2025-11-22 17:32:10,927 | INFO     | ***************************************
[2025-11-22 14:56:07] 2025-11-22 17:32:11,430 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 14:56:07] 2025-11-22 17:32:11,483 | INFO     | sufficient remaining disk space (49610227712 B)
[2025-11-22 14:56:07] 2025-11-22 17:32:11,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 14:56:07] 2025-11-22 17:32:11,484 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 14:56:07] 2025-11-22 17:32:11,484 | INFO     | update_server=False
[2025-11-22 14:56:07] 2025-11-22 17:32:11,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 14:56:07] 2025-11-22 17:32:11,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:56:07] 2025-11-22 17:32:11,561 | INFO     | aborting loop
[2025-11-22 14:56:07] 2025-11-22 17:32:11,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 14:56:07] 2025-11-22 17:32:12,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 14:56:07] 2025-11-22 17:32:12,125 | INFO     | all data control threads have been joined
[2025-11-22 14:56:07] 2025-11-22 17:32:12,337 | INFO     | all payload control threads have been joined
[2025-11-22 14:56:07] 2025-11-22 17:32:12,490 | INFO     | [job] retrieve thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:12,567 | INFO     | [job] job monitor thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:12,704 | INFO     | [payload] validate_post thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:12,792 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:13,036 | INFO     | [data] copytool_in thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:13,126 | INFO     | [job] validate thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:13,131 | INFO     | [data] control thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:13,148 | INFO     | all job control threads have been joined
[2025-11-22 14:56:07] 2025-11-22 17:32:13,343 | INFO     | [payload] control thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:13,513 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:13,689 | INFO     | [data] copytool_out thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:13,822 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:13,930 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:14,071 | INFO     | [payload] failed_post thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:14,154 | INFO     | [job] control thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:14,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:56:07] 2025-11-22 17:32:15,401 | INFO     | [job] queue monitor thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:16,059 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 14:56:07] 2025-11-22 17:32:40,681 | INFO     | [monitor] cgroup control has ended
[2025-11-22 14:56:07] 2025-11-22 17:32:40,996 | INFO     | PID=3945271 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 14:56:07] 2025-11-22 17:32:40,996 | INFO     | .. there are 8 such processes running
[2025-11-22 14:56:07] 2025-11-22 17:32:40,997 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 14:56:07] 2025-11-22 17:32:40,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 14:56:07] 2025-11-22 17:32:40,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 14:56:07] 2025-11-22 17:32:41,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139659240478528)>', '<ExcThread(monitor, started 139658746902272)>']
[2025-11-22 14:56:07] 2025-11-22 17:32:42,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 14:56:07] 2025-11-22 17:32:42,003 | INFO     | [monitor] control thread has ended
[2025-11-22 14:56:07] 2025-11-22 17:32:46,216 | INFO     | all workflow threads have been joined
[2025-11-22 14:56:07] 2025-11-22 17:32:46,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 14:56:07] 2025-11-22 17:32:46,216 | INFO     | traces error code: 0
[2025-11-22 14:56:07] 2025-11-22 17:32:46,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 14:56:07] 2025-11-22 17:32:46,468 [wrapper] ==== pilot stdout END ====
[2025-11-22 14:56:07] 2025-11-22 17:32:46,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 14:56:07] 2025-11-22 17:32:46,497 [wrapper] pilotpid: 3945271
[2025-11-22 14:56:07] 2025-11-22 17:32:46,522 [wrapper] Pilot exit status: 0
[2025-11-22 14:56:07] 2025-11-22 17:32:46,658 [wrapper] pandaids: 6894257121
[2025-11-22 14:56:07] 2025-11-22 17:32:46,872 [wrapper] cleanup supervisor_pilot 1611854 3945272
[2025-11-22 14:56:07] 2025-11-22 17:32:46,877 [wrapper] Test setup, not cleaning
[2025-11-22 14:56:07] 2025-11-22 17:32:46,880 [wrapper] apfmon messages muted
[2025-11-22 14:56:07] 2025-11-22 17:32:46,883 [wrapper] ==== wrapper stdout END ====
[2025-11-22 14:56:07] 2025-11-22 17:32:46,886 [wrapper] ==== wrapper stderr END ====
[2025-11-22 14:56:07]  *** Error codes and diagnostics ***
[2025-11-22 14:56:07]     "exeErrorCode": 0,
[2025-11-22 14:56:07]     "exeErrorDiag": "",
[2025-11-22 14:56:07]     "pilotErrorCode": 0,
[2025-11-22 14:56:07]     "pilotErrorDiag": "",
[2025-11-22 14:56:07]  *** Listing of results directory ***
[2025-11-22 14:56:07] total 1323256
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 22:09 queuedata.json
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 22:09 pilot3.tar.gz
[2025-11-22 14:56:07] -rwx------. 1 boincer umatlas     36292 Nov 20 22:10 runpilot2-wrapper.sh
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas       100 Nov 21 12:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 14:56:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 12:57 run_atlas
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas       105 Nov 21 12:57 job.xml
[2025-11-22 14:56:07] -rw-r--r--. 2 boincer umatlas 410096579 Nov 21 12:57 EVNT.47493127._002150.pool.root.1
[2025-11-22 14:56:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 12:57 start_atlas.sh
[2025-11-22 14:56:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 12:57 shared
[2025-11-22 14:56:07] -rw-r--r--. 2 boincer umatlas    590107 Nov 21 12:57 input.tar.gz
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas         0 Nov 21 12:57 boinc_lockfile
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 12:58 pandaJob.out
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas        57 Nov 21 12:58 setup.sh.local
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas    989798 Nov 21 12:59 agis_schedconf.cvmfs.json
[2025-11-22 14:56:07] drwx------. 5 boincer umatlas      4096 Nov 21 12:59 pilot3
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas       533 Nov 22 12:17 boinc_task_state.xml
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas 913560927 Nov 22 12:31 HITS.47533967._001220.pool.root.1
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas      1070 Nov 22 12:31 memory_monitor_summary.json
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas        95 Nov 22 12:31 pilot_heartbeat.json
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas   1526164 Nov 22 12:31 agis_ddmendpoints.agis.ALL.json
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas   2471829 Nov 22 12:31 log.47533967._001220.job.log.tgz.1
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas      8664 Nov 22 12:32 heartbeat.json
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas      4823 Nov 22 12:32 pilotlog.txt
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas  11251950 Nov 22 12:32 log.47533967._001220.job.log.1
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas       353 Nov 22 12:32 output.list
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas       620 Nov 22 12:32 runtime_log
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas  13742080 Nov 22 12:32 result.tar.gz
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas      9338 Nov 22 12:32 runtime_log.err
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas       664 Nov 22 12:32 lNFKDmsiWg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3vIKDmJEn7Dn.diag
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas      6662 Nov 22 14:56 init_data.xml
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 14:56 boinc_mmap_file
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas        29 Nov 22 14:56 wrapper_checkpoint.txt
[2025-11-22 14:56:07] -rw-r--r--. 1 boincer umatlas      2071 Nov 22 14:56 stderr.txt
[2025-11-22 14:56:07] HITS file was successfully produced:
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas 913560927 Nov 22 12:31 shared/HITS.pool.root.1
[2025-11-22 14:56:07]  *** Contents of shared directory: ***
[2025-11-22 14:56:07] total 1306664
[2025-11-22 14:56:07] -rw-r--r--. 2 boincer umatlas 410096579 Nov 21 12:57 ATLAS.root_0
[2025-11-22 14:56:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 12:57 start_atlas.sh
[2025-11-22 14:56:07] -rw-r--r--. 2 boincer umatlas    590107 Nov 21 12:57 input.tar.gz
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas 913560927 Nov 22 12:31 HITS.pool.root.1
[2025-11-22 14:56:07] -rw-------. 1 boincer umatlas  13742080 Nov 22 12:32 result.tar.gz
14:56:09 (3941036): run_atlas exited; CPU time 297176.486807
14:56:09 (3941036): called boinc_finish(0)

</stderr_txt>
]]>

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