Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:19:47 (2840366): wrapper (7.7.26015): starting
12:19:47 (2840366): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 12:19:47] Arguments: --nthreads 8
[2025-11-21 12:19:47] Threads: 8
[2025-11-21 12:19:47] Checking for CVMFS
[2025-11-21 12:19:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 12:19:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 12:19:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 12:19:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 12:19:48] 2.13.2.0 4057 25993 180032 153138 3 11 28076549 39288832 5847 16776704 0 15803886 99.594 13183654 34694 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 12:19:48] CVMFS is ok
[2025-11-21 12:19:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 12:19:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 12:19:48] Further information can be found at the LHC@home message board.
[2025-11-21 12:19:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 12:19:48] Checking for apptainer binary...
[2025-11-21 12:19:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 12:19:48] Running /usr/bin/apptainer --version
[2025-11-21 12:19:48] apptainer version 1.4.4-1.el9
[2025-11-21 12:19:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 12:19:48] c-210-24.aglt2.org
[2025-11-21 12:19:48] apptainer works
[2025-11-21 12:19:48] Set ATHENA_PROC_NUMBER=8
[2025-11-21 12:19:48] Set ATHENA_CORE_NUMBER=8
[2025-11-21 12:19:48] Starting ATLAS job with PandaID=6894258224
[2025-11-21 12:19:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 07:35:25]  *** The last 200 lines of the pilot log: ***
[2025-11-22 07:35:25] 2025-11-22 12:34:27,354 | INFO     | preparing for final server update for job 6894258224 in state='finished'
[2025-11-22 07:35:25] 2025-11-22 12:34:27,355 | INFO     | this job has now completed (state=finished)
[2025-11-22 07:35:25] 2025-11-22 12:34:27,355 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-22 07:35:25] 2025-11-22 12:34:27,355 | INFO     | log transfer has been attempted: DONE
[2025-11-22 07:35:25] 2025-11-22 12:34:27,355 | INFO     | job 6894258224 has finished - writing final server update
[2025-11-22 07:35:25] 2025-11-22 12:34:27,355 | INFO     | total number of processed events: 1000 (read)
[2025-11-22 07:35:25] 2025-11-22 12:34:27,356 | INFO     | executing command: lscpu
[2025-11-22 07:35:25] 2025-11-22 12:34:27,416 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-22 07:35:25] 2025-11-22 12:34:28,706 | INFO     | monitor loop #4549: job 0:6894258224 is in state 'finished'
[2025-11-22 07:35:25] 2025-11-22 12:34:28,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 07:35:25] 2025-11-22 12:34:29,150 | INFO     | time since job start (69253s) is within the limit (172800.0s)
[2025-11-22 07:35:25] 2025-11-22 12:34:31,156 | INFO     | time since job start (69255s) is within the limit (172800.0s)
[2025-11-22 07:35:25] 2025-11-22 12:34:31,210 | INFO     | monitor loop #4550: job 0:6894258224 is in state 'finished'
[2025-11-22 07:35:25] 2025-11-22 12:34:31,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 07:35:25] 2025-11-22 12:34:33,162 | INFO     | time since job start (69257s) is within the limit (172800.0s)
[2025-11-22 07:35:25] 2025-11-22 12:34:33,717 | INFO     | monitor loop #4551: job 0:6894258224 is in state 'finished'
[2025-11-22 07:35:25] 2025-11-22 12:34:33,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 07:35:25] 2025-11-22 12:34:34,176 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 07:35:25] 2025-11-22 12:34:34,185 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.052899999999
[2025-11-22 07:35:25] 2025-11-22 12:34:34,193 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6894258224/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 07:35:25] 2025-11-22 12:34:34,193 | INFO     | extracted standard info from prmon json
[2025-11-22 07:35:25] 2025-11-22 12:34:34,193 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 07:35:25] 2025-11-22 12:34:34,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 07:35:25] 2025-11-22 12:34:34,214 | INFO     | fitting pss+swap vs Time
[2025-11-22 07:35:25] 2025-11-22 12:34:34,216 | INFO     | sum of square deviations: 453384554759.3782
[2025-11-22 07:35:25] 2025-11-22 12:34:34,254 | INFO     | sum of deviations: 1756521479438.5002
[2025-11-22 07:35:25] 2025-11-22 12:34:34,254 | INFO     | mean x: 1763780262.6044054
[2025-11-22 07:35:25] 2025-11-22 12:34:34,255 | INFO     | mean y: 2941877.21938326
[2025-11-22 07:35:25] 2025-11-22 12:34:34,255 | INFO     | intersect: -6830369676.409877
[2025-11-22 07:35:25] 2025-11-22 12:34:34,256 | INFO     | chi2: 13.515264441795347
[2025-11-22 07:35:25] 2025-11-22 12:34:34,258 | INFO     | sum of square deviations: 447419612253.9505
[2025-11-22 07:35:25] 2025-11-22 12:34:34,291 | INFO     | sum of deviations: 2132534422831.6167
[2025-11-22 07:35:25] 2025-11-22 12:34:34,291 | INFO     | mean x: 1763780110.1115043
[2025-11-22 07:35:25] 2025-11-22 12:34:34,291 | INFO     | mean y: 2951487.868141593
[2025-11-22 07:35:25] 2025-11-22 12:34:34,291 | INFO     | intersect: -8403747047.697253
[2025-11-22 07:35:25] 2025-11-22 12:34:34,294 | INFO     | chi2: 10.42517425296453
[2025-11-22 07:35:25] 2025-11-22 12:34:34,294 | INFO     | current chi2=10.42517425296453 (change=22.863704976980344 %)
[2025-11-22 07:35:25] 2025-11-22 12:34:34,294 | INFO     | right removable region: 1129
[2025-11-22 07:35:25] 2025-11-22 12:34:34,295 | INFO     | sum of square deviations: 447418501443.95026
[2025-11-22 07:35:25] 2025-11-22 12:34:34,329 | INFO     | sum of deviations: 1428640833550.5327
[2025-11-22 07:35:25] 2025-11-22 12:34:34,329 | INFO     | mean x: 1763780415.1115043
[2025-11-22 07:35:25] 2025-11-22 12:34:34,329 | INFO     | mean y: 2950249.7973451326
[2025-11-22 07:35:25] 2025-11-22 12:34:34,330 | INFO     | intersect: -5628932907.275608
[2025-11-22 07:35:25] 2025-11-22 12:34:34,331 | INFO     | chi2: 11.196627671556849
[2025-11-22 07:35:25] 2025-11-22 12:34:34,331 | INFO     | current chi2=11.196627671556849 (change=17.15568925953249 %)
[2025-11-22 07:35:25] 2025-11-22 12:34:34,331 | INFO     | left removable region: 10
[2025-11-22 07:35:25] 2025-11-22 12:34:34,333 | INFO     | sum of square deviations: 434479334804.1092
[2025-11-22 07:35:25] 2025-11-22 12:34:34,365 | INFO     | sum of deviations: 1788641357002.644
[2025-11-22 07:35:25] 2025-11-22 12:34:34,366 | INFO     | mean x: 1763780384.6255586
[2025-11-22 07:35:25] 2025-11-22 12:34:34,366 | INFO     | mean y: 2964022.159070599
[2025-11-22 07:35:25] 2025-11-22 12:34:34,366 | INFO     | intersect: -7258073012.050335
[2025-11-22 07:35:25] 2025-11-22 12:34:34,367 | INFO     | chi2: 7.4795180484288135
[2025-11-22 07:35:25] 2025-11-22 12:34:34,368 | INFO     | current memory leak: 4.12 B/s (using 1119 data points, chi2=7.48)
[2025-11-22 07:35:25] 2025-11-22 12:34:34,369 | INFO     | could have reported an average CPU frequency of 2600 MHz (41 samples)
[2025-11-22 07:35:25] 2025-11-22 12:34:34,369 | INFO     | ..............................
[2025-11-22 07:35:25] 2025-11-22 12:34:34,369 | INFO     | . Timing measurements:
[2025-11-22 07:35:25] 2025-11-22 12:34:34,369 | INFO     | . get job = 0 s
[2025-11-22 07:35:25] 2025-11-22 12:34:34,369 | INFO     | . initial setup = 3 s
[2025-11-22 07:35:25] 2025-11-22 12:34:34,369 | INFO     | . payload setup = 14 s
[2025-11-22 07:35:25] 2025-11-22 12:34:34,369 | INFO     | . stage-in = 0 s
[2025-11-22 07:35:25] 2025-11-22 12:34:34,370 | INFO     | . payload execution = 69191 s
[2025-11-22 07:35:25] 2025-11-22 12:34:34,370 | INFO     | . stage-out = 3 s
[2025-11-22 07:35:25] 2025-11-22 12:34:34,370 | INFO     | . log creation = 0 s
[2025-11-22 07:35:25] 2025-11-22 12:34:34,370 | INFO     | ..............................
[2025-11-22 07:35:25] 2025-11-22 12:34:34,471 | INFO     | 
[2025-11-22 07:35:25] 2025-11-22 12:34:34,472 | INFO     | job summary report
[2025-11-22 07:35:25] 2025-11-22 12:34:34,472 | INFO     | --------------------------------------------------
[2025-11-22 07:35:25] 2025-11-22 12:34:34,472 | INFO     | PanDA job id: 6894258224
[2025-11-22 07:35:25] 2025-11-22 12:34:34,472 | INFO     | task id: 47533967
[2025-11-22 07:35:25] 2025-11-22 12:34:34,472 | INFO     | errors: (none)
[2025-11-22 07:35:25] 2025-11-22 12:34:34,472 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 07:35:25] 2025-11-22 12:34:34,472 | INFO     | pilot state: finished 
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | transexitcode: 0
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | exeerrorcode: 0
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | exeerrordiag: 
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | exitcode: 0
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | exitmsg: OK
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | cpuconsumptiontime: 288486 s
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | nevents: 1000
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | neventsw: 0
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | pid: 2852241
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | pgrp: 2852241
[2025-11-22 07:35:25] 2025-11-22 12:34:34,473 | INFO     | corecount: 8
[2025-11-22 07:35:25] 2025-11-22 12:34:34,474 | INFO     | event service: False
[2025-11-22 07:35:25] 2025-11-22 12:34:34,474 | INFO     | sizes: {0: 2298585, 1: 2298784, 12: 2298784, 14: 2299074, 23: 2299102, 69209: 2358140, 69213: 2367134, 69215: 2367190, 69225: 2367532}
[2025-11-22 07:35:25] 2025-11-22 12:34:34,474 | INFO     | --------------------------------------------------
[2025-11-22 07:35:25] 2025-11-22 12:34:34,474 | INFO     | 
[2025-11-22 07:35:25] 2025-11-22 12:34:34,474 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-22 07:35:25] 2025-11-22 12:34:34,500 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,500 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,500 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,500 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,502 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,502 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,502 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,502 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 07:35:25] 2025-11-22 12:34:34,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,502 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 07:35:25] 2025-11-22 12:34:34,502 | INFO     | job 6894258224 has completed (purged errors)
[2025-11-22 07:35:25] 2025-11-22 12:34:34,503 | INFO     | overall cleanup function is called
[2025-11-22 07:35:25] 2025-11-22 12:34:35,520 | INFO     | --- collectZombieJob: --- 10, [2852241]
[2025-11-22 07:35:25] 2025-11-22 12:34:35,520 | INFO     | zombie collector waiting for pid 2852241
[2025-11-22 07:35:25] 2025-11-22 12:34:35,520 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 07:35:25] 2025-11-22 12:34:35,520 | INFO     | collected zombie processes
[2025-11-22 07:35:25] 2025-11-22 12:34:35,521 | INFO     | will attempt to kill all subprocesses of pid=2852241
[2025-11-22 07:35:25] 2025-11-22 12:34:35,753 | INFO     | process IDs to be killed: [2852241] (in reverse order)
[2025-11-22 07:35:25] 2025-11-22 12:34:35,853 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 07:35:25] 2025-11-22 12:34:35,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 07:35:25] 2025-11-22 12:34:35,860 | INFO     | did not find any defunct processes belonging to 2852241
[2025-11-22 07:35:25] 2025-11-22 12:34:35,867 | INFO     | did not find any defunct processes belonging to 2852241
[2025-11-22 07:35:25] 2025-11-22 12:34:35,870 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 07:35:25] 2025-11-22 12:34:35,870 | INFO     | ready for new job
[2025-11-22 07:35:25] 2025-11-22 12:34:35,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 07:35:25] 2025-11-22 12:34:35,876 | INFO     | ***************************************
[2025-11-22 07:35:25] 2025-11-22 12:34:35,877 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 07:35:25] 2025-11-22 12:34:35,877 | INFO     | ***************************************
[2025-11-22 07:35:25] 2025-11-22 12:34:35,877 | INFO     | 
[2025-11-22 07:35:25] 2025-11-22 12:34:35,879 | INFO     | architecture information:
[2025-11-22 07:35:25] 2025-11-22 12:34:35,880 | INFO     | executing command: cat /etc/os-release
[2025-11-22 07:35:25] 2025-11-22 12:34:35,895 | INFO     | cat /etc/os-release:
[2025-11-22 07:35:25] NAME="CentOS Linux"
[2025-11-22 07:35:25] VERSION="7 (Core)"
[2025-11-22 07:35:25] ID="centos"
[2025-11-22 07:35:25] ID_LIKE="rhel fedora"
[2025-11-22 07:35:25] VERSION_ID="7"
[2025-11-22 07:35:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 07:35:25] ANSI_COLOR="0;31"
[2025-11-22 07:35:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 07:35:25] HOME_URL="https://www.centos.org/"
[2025-11-22 07:35:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 07:35:25] 
[2025-11-22 07:35:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 07:35:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 07:35:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 07:35:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 07:35:25] 
[2025-11-22 07:35:25] 2025-11-22 12:34:35,895 | INFO     | ***************************************
[2025-11-22 07:35:25] 2025-11-22 12:34:36,397 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-22 07:35:25] 2025-11-22 12:34:36,421 | INFO     | sufficient remaining disk space (47552921600 B)
[2025-11-22 07:35:25] 2025-11-22 12:34:36,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 07:35:25] 2025-11-22 12:34:36,422 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 07:35:25] 2025-11-22 12:34:36,422 | INFO     | update_server=False
[2025-11-22 07:35:25] 2025-11-22 12:34:36,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 07:35:25] 2025-11-22 12:34:36,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:35:25] 2025-11-22 12:34:36,910 | INFO     | all payload control threads have been joined
[2025-11-22 07:35:25] 2025-11-22 12:34:37,084 | INFO     | all job control threads have been joined
[2025-11-22 07:35:25] 2025-11-22 12:34:37,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:35:25] 2025-11-22 12:34:37,238 | INFO     | aborting loop
[2025-11-22 07:35:25] 2025-11-22 12:34:37,380 | INFO     | all data control threads have been joined
[2025-11-22 07:35:25] 2025-11-22 12:34:37,428 | INFO     | [job] retrieve thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:37,429 | INFO     | [job] queue monitor thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:37,741 | INFO     | [payload] failed_post thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:37,744 | INFO     | [data] copytool_in thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:37,799 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 07:35:25] 2025-11-22 12:34:37,916 | INFO     | [payload] control thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:37,926 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:38,083 | INFO     | [job] validate thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:38,092 | INFO     | [job] control thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:38,238 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:38,246 | INFO     | [job] job monitor thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:38,384 | INFO     | [data] control thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:38,434 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:38,622 | INFO     | [payload] validate_post thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:38,778 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:39,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 07:35:25] 2025-11-22 12:34:39,806 | INFO     | [data] copytool_out thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:34:43,764 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 07:35:25] 2025-11-22 12:35:06,588 | INFO     | PID=2845342 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 07:35:25] 2025-11-22 12:35:06,588 | INFO     | .. there are 8 such processes running
[2025-11-22 07:35:25] 2025-11-22 12:35:06,589 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 07:35:25] 2025-11-22 12:35:06,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 07:35:25] 2025-11-22 12:35:06,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 07:35:25] 2025-11-22 12:35:18,112 | INFO     | [monitor] cgroup control has ended
[2025-11-22 07:35:25] 2025-11-22 12:35:19,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745545951040)>', '<ExcThread(monitor, started 139745048901376)>']
[2025-11-22 07:35:25] 2025-11-22 12:35:20,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 07:35:25] 2025-11-22 12:35:20,667 | INFO     | [monitor] control thread has ended
[2025-11-22 07:35:25] 2025-11-22 12:35:24,767 | INFO     | all workflow threads have been joined
[2025-11-22 07:35:25] 2025-11-22 12:35:24,768 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 07:35:25] 2025-11-22 12:35:24,768 | INFO     | traces error code: 0
[2025-11-22 07:35:25] 2025-11-22 12:35:24,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 07:35:25] 2025-11-22 12:35:24,916 [wrapper] ==== pilot stdout END ====
[2025-11-22 07:35:25] 2025-11-22 12:35:24,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 07:35:25] 2025-11-22 12:35:24,921 [wrapper] pilotpid: 2845342
[2025-11-22 07:35:25] 2025-11-22 12:35:24,923 [wrapper] Pilot exit status: 0
[2025-11-22 07:35:25] 2025-11-22 12:35:24,943 [wrapper] pandaids: 6894258224
[2025-11-22 07:35:25] 2025-11-22 12:35:25,009 [wrapper] cleanup supervisor_pilot  256715 2845343
[2025-11-22 07:35:25] 2025-11-22 12:35:25,017 [wrapper] Test setup, not cleaning
[2025-11-22 07:35:25] 2025-11-22 12:35:25,022 [wrapper] apfmon messages muted
[2025-11-22 07:35:25] 2025-11-22 12:35:25,026 [wrapper] ==== wrapper stdout END ====
[2025-11-22 07:35:25] 2025-11-22 12:35:25,044 [wrapper] ==== wrapper stderr END ====
[2025-11-22 07:35:25]  *** Error codes and diagnostics ***
[2025-11-22 07:35:25]     "exeErrorCode": 0,
[2025-11-22 07:35:25]     "exeErrorDiag": "",
[2025-11-22 07:35:25]     "pilotErrorCode": 0,
[2025-11-22 07:35:25]     "pilotErrorDiag": "",
[2025-11-22 07:35:25]  *** Listing of results directory ***
[2025-11-22 07:35:25] total 1294536
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 22:09 pilot3.tar.gz
[2025-11-22 07:35:25] -rwx------. 1 boincer umatlas     36292 Nov 20 22:52 runpilot2-wrapper.sh
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 22:52 queuedata.json
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas       100 Nov 21 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 07:35:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 12:19 run_atlas
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas       105 Nov 21 12:19 job.xml
[2025-11-22 07:35:25] -rw-r--r--. 2 boincer umatlas 408370024 Nov 21 12:19 EVNT.47493127._002171.pool.root.1
[2025-11-22 07:35:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 12:19 start_atlas.sh
[2025-11-22 07:35:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 12:19 shared
[2025-11-22 07:35:25] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 12:19 input.tar.gz
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas         0 Nov 21 12:19 boinc_lockfile
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 12:19 pandaJob.out
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas        57 Nov 21 12:19 setup.sh.local
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas    989798 Nov 21 12:20 agis_schedconf.cvmfs.json
[2025-11-22 07:35:25] drwx------. 5 boincer umatlas      4096 Nov 21 12:20 pilot3
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas       533 Nov 22 07:12 boinc_task_state.xml
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas      6658 Nov 22 07:28 init_data.xml
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas 890205815 Nov 22 07:33 HITS.47533967._001428.pool.root.1
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas        95 Nov 22 07:34 pilot_heartbeat.json
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas      1060 Nov 22 07:34 memory_monitor_summary.json
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas   1526164 Nov 22 07:34 agis_ddmendpoints.agis.ALL.json
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas   2274762 Nov 22 07:34 log.47533967._001428.job.log.tgz.1
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas      8623 Nov 22 07:34 heartbeat.json
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 07:35 boinc_mmap_file
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas        29 Nov 22 07:35 wrapper_checkpoint.txt
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas      4823 Nov 22 07:35 pilotlog.txt
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas   9281212 Nov 22 07:35 log.47533967._001428.job.log.1
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas       353 Nov 22 07:35 output.list
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas       620 Nov 22 07:35 runtime_log
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas  11571200 Nov 22 07:35 result.tar.gz
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas      9343 Nov 22 07:35 runtime_log.err
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas       660 Nov 22 07:35 qpDMDmWNXg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1yIKDmltnlHo.diag
[2025-11-22 07:35:25] -rw-r--r--. 1 boincer umatlas     21779 Nov 22 07:35 stderr.txt
[2025-11-22 07:35:25] HITS file was successfully produced:
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas 890205815 Nov 22 07:33 shared/HITS.pool.root.1
[2025-11-22 07:35:25]  *** Contents of shared directory: ***
[2025-11-22 07:35:25] total 1280044
[2025-11-22 07:35:25] -rw-r--r--. 2 boincer umatlas 408370024 Nov 21 12:19 ATLAS.root_0
[2025-11-22 07:35:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 12:19 start_atlas.sh
[2025-11-22 07:35:25] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 12:19 input.tar.gz
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas 890205815 Nov 22 07:33 HITS.pool.root.1
[2025-11-22 07:35:25] -rw-------. 1 boincer umatlas  11571200 Nov 22 07:35 result.tar.gz
07:35:26 (2840366): run_atlas exited; CPU time 289453.905193
07:35:26 (2840366): called boinc_finish(0)

</stderr_txt>
]]>

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