Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:35:19 (2906180): wrapper (7.7.26015): starting
18:35:19 (2906180): wrapper: running run_atlas (--nthreads 3)
[2025-11-21 18:35:19] Arguments: --nthreads 3
[2025-11-21 18:35:19] Threads: 3
[2025-11-21 18:35:19] Checking for CVMFS
[2025-11-21 18:35:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 18:35:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 18:35:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 18:35:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 18:35:20] 2.9.2.0 16720 1722 82024 153128 1 252 34534766 36864000 0 130560 0 21267777 99.999 42797 1751 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 18:35:20] CVMFS is ok
[2025-11-21 18:35:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 18:35:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 18:35:20] Further information can be found at the LHC@home message board.
[2025-11-21 18:35:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 18:35:20] Checking for apptainer binary...
[2025-11-21 18:35:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 18:35:20] Running /usr/bin/apptainer --version
[2025-11-21 18:35:20] apptainer version 1.4.1-1.1
[2025-11-21 18:35:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 18:35:20] thA335
[2025-11-21 18:35:20] apptainer works
[2025-11-21 18:35:20] Set ATHENA_PROC_NUMBER=3
[2025-11-21 18:35:20] Set ATHENA_CORE_NUMBER=3
[2025-11-21 18:35:20] Starting ATLAS job with PandaID=6890934245
[2025-11-21 18:35:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 18:39:35]  *** The last 200 lines of the pilot log: ***
[2025-11-21 18:39:35] 2025-11-21 17:38:40,051 | INFO     | 
[2025-11-21 18:39:35] 2025-11-21 17:38:40,052 | INFO     | architecture information:
[2025-11-21 18:39:35] 2025-11-21 17:38:40,053 | INFO     | executing command: cat /etc/os-release
[2025-11-21 18:39:35] 2025-11-21 17:38:40,073 | INFO     | cat /etc/os-release:
[2025-11-21 18:39:35] NAME="CentOS Linux"
[2025-11-21 18:39:35] VERSION="7 (Core)"
[2025-11-21 18:39:35] ID="centos"
[2025-11-21 18:39:35] ID_LIKE="rhel fedora"
[2025-11-21 18:39:35] VERSION_ID="7"
[2025-11-21 18:39:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 18:39:35] ANSI_COLOR="0;31"
[2025-11-21 18:39:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 18:39:35] HOME_URL="https://www.centos.org/"
[2025-11-21 18:39:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 18:39:35] 
[2025-11-21 18:39:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 18:39:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 18:39:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 18:39:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 18:39:35] 
[2025-11-21 18:39:35] 2025-11-21 17:38:40,073 | INFO     | ***************************************
[2025-11-21 18:39:35] 2025-11-21 17:38:40,576 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-21 18:39:35] 2025-11-21 17:38:40,589 | INFO     | sufficient remaining disk space (827101020160 B)
[2025-11-21 18:39:35] 2025-11-21 17:38:40,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 18:39:35] 2025-11-21 17:38:40,590 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 18:39:35] 2025-11-21 17:38:40,590 | INFO     | update_server=False
[2025-11-21 18:39:35] 2025-11-21 17:38:40,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 18:39:35] 2025-11-21 17:38:40,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 18:39:35] 2025-11-21 17:38:40,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:39:35] 2025-11-21 17:38:40,590 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 18:39:35] 2025-11-21 17:38:40,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:39:35] 2025-11-21 17:38:40,590 | INFO     | aborting loop
[2025-11-21 18:39:35] 2025-11-21 17:38:40,591 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 18:39:35] 2025-11-21 17:38:40,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 18:39:35] 2025-11-21 17:38:40,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 18:39:35] 2025-11-21 17:38:41,343 | INFO     | all data control threads have been joined
[2025-11-21 18:39:35] 2025-11-21 17:38:41,596 | INFO     | [job] retrieve thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:41,596 | INFO     | [job] queue monitor thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:41,597 | INFO     | [job] job monitor thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:41,621 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:41,654 | INFO     | [payload] failed_post thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:41,768 | INFO     | [data] copytool_in thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:41,999 | INFO     | all payload control threads have been joined
[2025-11-21 18:39:35] 2025-11-21 17:38:42,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 18:39:35] 2025-11-21 17:38:42,179 | INFO     | all job control threads have been joined
[2025-11-21 18:39:35] 2025-11-21 17:38:42,311 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:42,349 | INFO     | [data] control thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:42,385 | INFO     | [payload] validate_post thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:42,596 | INFO     | [data] copytool_out thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:42,681 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:42,996 | INFO     | [job] validate thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:43,005 | INFO     | [payload] control thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:43,068 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:43,185 | INFO     | [job] control thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:38:46,141 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 18:39:35] 2025-11-21 17:39:29,272 | INFO     | [monitor] cgroup control has ended
[2025-11-21 18:39:35] 2025-11-21 17:39:30,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140178348697408)>', '<ExcThread(monitor, started 140177708140288)>']
[2025-11-21 18:39:35] 2025-11-21 17:39:30,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 18:39:35] 2025-11-21 17:39:30,852 | INFO     | [monitor] control thread has ended
[2025-11-21 18:39:35] 2025-11-21 17:39:35,231 | INFO     | all workflow threads have been joined
[2025-11-21 18:39:35] 2025-11-21 17:39:35,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 18:39:35] 2025-11-21 17:39:35,232 | INFO     | traces error code: 0
[2025-11-21 18:39:35] 2025-11-21 17:39:35,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 18:39:35] 2025-11-21 17:39:35,280 [wrapper] ==== pilot stdout END ====
[2025-11-21 18:39:35] 2025-11-21 17:39:35,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 18:39:35] 2025-11-21 17:39:35,286 [wrapper] pilotpid: 2909910
[2025-11-21 18:39:35] 2025-11-21 17:39:35,289 [wrapper] Pilot exit status: 0
[2025-11-21 18:39:35] 2025-11-21 17:39:35,296 [wrapper] pandaids: 6890934245
[2025-11-21 18:39:35] 2025-11-21 17:39:35,312 [wrapper] cleanup supervisor_pilot 2909916 2909911
[2025-11-21 18:39:35] 2025-11-21 17:39:35,315 [wrapper] Test setup, not cleaning
[2025-11-21 18:39:35] 2025-11-21 17:39:35,318 [wrapper] apfmon messages muted
[2025-11-21 18:39:35] 2025-11-21 17:39:35,320 [wrapper] ==== wrapper stdout END ====
[2025-11-21 18:39:35] 2025-11-21 17:39:35,323 [wrapper] ==== wrapper stderr END ====
[2025-11-21 18:39:35]  *** Error codes and diagnostics ***
[2025-11-21 18:39:35]     "exeErrorCode": 65,
[2025-11-21 18:39:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 18:39:35]     "pilotErrorCode": 1305,
[2025-11-21 18:39:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 18:39:35]  *** Listing of results directory ***
[2025-11-21 18:39:35] total 404672
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc    576529 Nov 18 03:22 pilot3.tar.gz
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc      5112 Nov 18 03:56 queuedata.json
[2025-11-21 18:39:35] -rwx------ 1 boinc boinc     36292 Nov 18 03:57 runpilot2-wrapper.sh
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc       100 Nov 21 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 18:39:35] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 18:35 run_atlas
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc       105 Nov 21 18:35 job.xml
[2025-11-21 18:39:35] -rw-r--r-- 2 boinc boinc 410189346 Nov 21 18:35 EVNT.47483658._000083.pool.root.1
[2025-11-21 18:39:35] -rw-r--r-- 2 boinc boinc    590106 Nov 21 18:35 input.tar.gz
[2025-11-21 18:39:35] -rw-r--r-- 2 boinc boinc     15120 Nov 21 18:35 start_atlas.sh
[2025-11-21 18:39:35] drwxrwx--x 2 boinc boinc      4096 Nov 21 18:35 shared
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc         0 Nov 21 18:35 boinc_setup_complete
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc      6194 Nov 21 18:35 init_data.xml
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc         0 Nov 21 18:35 boinc_lockfile
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc      2771 Nov 21 18:35 pandaJob.out
[2025-11-21 18:39:35] -rw------- 1 boinc boinc    989817 Nov 21 18:35 agis_schedconf.cvmfs.json
[2025-11-21 18:39:35] -rw------- 1 boinc boinc   1526164 Nov 21 18:35 agis_ddmendpoints.agis.ALL.json
[2025-11-21 18:39:35] drwx------ 5 boinc boinc      4096 Nov 21 18:35 pilot3
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc       522 Nov 21 18:36 boinc_task_state.xml
[2025-11-21 18:39:35] -rw------- 1 boinc boinc       966 Nov 21 18:36 memory_monitor_summary.json
[2025-11-21 18:39:35] -rw------- 1 boinc boinc     54187 Nov 21 18:36 log.47483661._000508.job.log.tgz.1
[2025-11-21 18:39:35] -rw------- 1 boinc boinc        95 Nov 21 18:38 pilot_heartbeat.json
[2025-11-21 18:39:35] -rw------- 1 boinc boinc      8382 Nov 21 18:38 heartbeat.json
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc        22 Nov 21 18:39 wrapper_checkpoint.txt
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc      8192 Nov 21 18:39 boinc_mmap_file
[2025-11-21 18:39:35] -rw------- 1 boinc boinc      4556 Nov 21 18:39 pilotlog.txt
[2025-11-21 18:39:35] -rw------- 1 boinc boinc     91373 Nov 21 18:39 log.47483661._000508.job.log.1
[2025-11-21 18:39:35] -rw------- 1 boinc boinc       186 Nov 21 18:39 output.list
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc       620 Nov 21 18:39 runtime_log
[2025-11-21 18:39:35] -rw------- 1 boinc boinc    163840 Nov 21 18:39 result.tar.gz
[2025-11-21 18:39:35] -rw------- 1 boinc boinc       649 Nov 21 18:39 tPcMDmO5Qf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX0JODmBDOzzn.diag
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc      8624 Nov 21 18:39 runtime_log.err
[2025-11-21 18:39:35] -rw-r--r-- 1 boinc boinc      9327 Nov 21 18:39 stderr.txt
[2025-11-21 18:39:35] No HITS result produced
[2025-11-21 18:39:35]  *** Contents of shared directory: ***
[2025-11-21 18:39:35] total 401336
[2025-11-21 18:39:35] -rw-r--r-- 2 boinc boinc 410189346 Nov 21 18:35 ATLAS.root_0
[2025-11-21 18:39:35] -rw-r--r-- 2 boinc boinc    590106 Nov 21 18:35 input.tar.gz
[2025-11-21 18:39:35] -rw-r--r-- 2 boinc boinc     15120 Nov 21 18:35 start_atlas.sh
[2025-11-21 18:39:35] -rw------- 1 boinc boinc    163840 Nov 21 18:39 result.tar.gz
18:39:36 (2906180): run_atlas exited; CPU time 30.326286
18:39:36 (2906180): called boinc_finish(0)

</stderr_txt>
]]>

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