Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:50:52 (170153): wrapper (7.7.26015): starting
12:50:52 (170153): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 12:50:52] Arguments: --nthreads 8
[2025-11-21 12:50:52] Threads: 8
[2025-11-21 12:50:52] Checking for CVMFS
[2025-11-21 12:50:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 12:50:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 12:50:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 12:50:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 12:50:54] 2.13.2.0 7884 29772 254560 153138 0 174 36732538 40960001 21411 16776704 0 331023876 99.746 207112406 43624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 12:50:54] CVMFS is ok
[2025-11-21 12:50:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 12:50:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 12:50:54] Further information can be found at the LHC@home message board.
[2025-11-21 12:50:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 12:50:54] Checking for apptainer binary...
[2025-11-21 12:50:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 12:50:54] Running /usr/bin/apptainer --version
[2025-11-21 12:50:54] apptainer version 1.4.4-1.el9
[2025-11-21 12:50:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 12:50:54] c-208-38.aglt2.org
[2025-11-21 12:50:54] apptainer works
[2025-11-21 12:50:54] Set ATHENA_PROC_NUMBER=8
[2025-11-21 12:50:54] Set ATHENA_CORE_NUMBER=8
[2025-11-21 12:50:54] Starting ATLAS job with PandaID=6893872776
[2025-11-21 12:50:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:34:57]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:34:57] 2025-11-22 03:34:11,486 | INFO     | time since job start (34956s) is within the limit (172800.0s)
[2025-11-21 22:34:57] 2025-11-22 03:34:12,717 | INFO     | monitor loop #2138: job 0:6893872776 is in state 'finished'
[2025-11-21 22:34:57] 2025-11-22 03:34:12,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:34:57] 2025-11-22 03:34:13,495 | INFO     | time since job start (34958s) is within the limit (172800.0s)
[2025-11-21 22:34:57] 2025-11-22 03:34:15,223 | INFO     | monitor loop #2139: job 0:6893872776 is in state 'finished'
[2025-11-21 22:34:57] 2025-11-22 03:34:15,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:34:57] 2025-11-22 03:34:15,523 | INFO     | time since job start (34960s) is within the limit (172800.0s)
[2025-11-21 22:34:57] 2025-11-22 03:34:17,532 | INFO     | time since job start (34962s) is within the limit (172800.0s)
[2025-11-21 22:34:57] 2025-11-22 03:34:17,728 | INFO     | monitor loop #2140: job 0:6893872776 is in state 'finished'
[2025-11-21 22:34:57] 2025-11-22 03:34:17,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:34:57] 2025-11-22 03:34:19,539 | INFO     | time since job start (34964s) is within the limit (172800.0s)
[2025-11-21 22:34:57] 2025-11-22 03:34:20,233 | INFO     | monitor loop #2141: job 0:6893872776 is in state 'finished'
[2025-11-21 22:34:57] 2025-11-22 03:34:20,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:34:57] 2025-11-22 03:34:20,665 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 22:34:57] 2025-11-22 03:34:20,676 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3761.3187578125003
[2025-11-21 22:34:57] 2025-11-22 03:34:20,702 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6893872776/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 22:34:57] 2025-11-22 03:34:20,707 | INFO     | extracted standard info from prmon json
[2025-11-21 22:34:57] 2025-11-22 03:34:20,707 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 22:34:57] 2025-11-22 03:34:20,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 22:34:57] 2025-11-22 03:34:20,716 | INFO     | fitting pss+swap vs Time
[2025-11-21 22:34:57] 2025-11-22 03:34:20,716 | INFO     | sum of square deviations: 57720417157.13468
[2025-11-21 22:34:57] 2025-11-22 03:34:20,724 | INFO     | sum of deviations: -1070340918.8627701
[2025-11-21 22:34:57] 2025-11-22 03:34:20,725 | INFO     | mean x: 1763764973.8231173
[2025-11-21 22:34:57] 2025-11-22 03:34:20,725 | INFO     | mean y: 2798954.08056042
[2025-11-21 22:34:57] 2025-11-22 03:34:20,725 | INFO     | intersect: 35505402.08838558
[2025-11-21 22:34:57] 2025-11-22 03:34:20,725 | INFO     | chi2: 16.34019299321669
[2025-11-21 22:34:57] 2025-11-22 03:34:20,727 | INFO     | sum of square deviations: 56217478552.869225
[2025-11-21 22:34:57] 2025-11-22 03:34:20,738 | INFO     | sum of deviations: 180106160218.56567
[2025-11-21 22:34:57] 2025-11-22 03:34:20,738 | INFO     | mean x: 1763764821.3392227
[2025-11-21 22:34:57] 2025-11-22 03:34:20,738 | INFO     | mean y: 2817333.8303886927
[2025-11-21 22:34:57] 2025-11-22 03:34:20,738 | INFO     | intersect: -5647825805.584816
[2025-11-21 22:34:57] 2025-11-22 03:34:20,738 | INFO     | chi2: 13.0084415292763
[2025-11-21 22:34:57] 2025-11-22 03:34:20,738 | INFO     | current chi2=13.0084415292763 (change=20.389915010939593 %)
[2025-11-21 22:34:57] 2025-11-22 03:34:20,738 | INFO     | right removable region: 565
[2025-11-21 22:34:57] 2025-11-22 03:34:20,758 | INFO     | sum of square deviations: 56216843542.86927
[2025-11-21 22:34:57] 2025-11-22 03:34:20,766 | INFO     | sum of deviations: -156211403798.93652
[2025-11-21 22:34:57] 2025-11-22 03:34:20,766 | INFO     | mean x: 1763765126.3392227
[2025-11-21 22:34:57] 2025-11-22 03:34:20,766 | INFO     | mean y: 2814659.780918728
[2025-11-21 22:34:57] 2025-11-22 03:34:20,766 | INFO     | intersect: 4903840917.986882
[2025-11-21 22:34:57] 2025-11-22 03:34:20,767 | INFO     | chi2: 14.144403587605987
[2025-11-21 22:34:57] 2025-11-22 03:34:20,767 | INFO     | current chi2=14.144403587605987 (change=13.437964940329902 %)
[2025-11-21 22:34:57] 2025-11-22 03:34:20,767 | INFO     | left removable region: 10
[2025-11-21 22:34:57] 2025-11-22 03:34:20,767 | INFO     | sum of square deviations: 53002185814.65951
[2025-11-21 22:34:57] 2025-11-22 03:34:20,775 | INFO     | sum of deviations: 28335390090.57302
[2025-11-21 22:34:57] 2025-11-22 03:34:20,775 | INFO     | mean x: 1763765095.8702703
[2025-11-21 22:34:57] 2025-11-22 03:34:20,775 | INFO     | mean y: 2840858.6468468467
[2025-11-21 22:34:57] 2025-11-22 03:34:20,775 | INFO     | intersect: -940081989.750063
[2025-11-21 22:34:57] 2025-11-22 03:34:20,776 | INFO     | chi2: 10.022502909111973
[2025-11-21 22:34:57] 2025-11-22 03:34:20,776 | INFO     | current memory leak: 0.53 B/s (using 555 data points, chi2=10.02)
[2025-11-21 22:34:57] 2025-11-22 03:34:20,776 | INFO     | could have reported an average CPU frequency of 3786 MHz (22 samples)
[2025-11-21 22:34:57] 2025-11-22 03:34:20,776 | INFO     | ..............................
[2025-11-21 22:34:57] 2025-11-22 03:34:20,776 | INFO     | . Timing measurements:
[2025-11-21 22:34:57] 2025-11-22 03:34:20,776 | INFO     | . get job = 0 s
[2025-11-21 22:34:57] 2025-11-22 03:34:20,776 | INFO     | . initial setup = 2 s
[2025-11-21 22:34:57] 2025-11-22 03:34:20,776 | INFO     | . payload setup = 25 s
[2025-11-21 22:34:57] 2025-11-22 03:34:20,777 | INFO     | . stage-in = 0 s
[2025-11-21 22:34:57] 2025-11-22 03:34:20,777 | INFO     | . payload execution = 34849 s
[2025-11-21 22:34:57] 2025-11-22 03:34:20,777 | INFO     | . stage-out = 7 s
[2025-11-21 22:34:57] 2025-11-22 03:34:20,777 | INFO     | . log creation = 2 s
[2025-11-21 22:34:57] 2025-11-22 03:34:20,777 | INFO     | ..............................
[2025-11-21 22:34:57] 2025-11-22 03:34:20,946 | INFO     | 
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | job summary report
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | --------------------------------------------------
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | PanDA job id: 6893872776
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | task id: 47523449
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | errors: (none)
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | pilot state: finished 
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | transexitcode: 0
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | exeerrorcode: 0
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | exeerrordiag: 
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | exitcode: 0
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | exitmsg: OK
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | cpuconsumptiontime: 137731 s
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | nevents: 1000
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | neventsw: 0
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | pid: 223286
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | pgrp: 223286
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | corecount: 8
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | event service: False
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | sizes: {0: 2298807, 1: 2298835, 11: 2298835, 16: 2299125, 22: 2299153, 34878: 2340345, 34879: 2340472, 34887: 2349580, 34923: 2349770}
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | --------------------------------------------------
[2025-11-21 22:34:57] 2025-11-22 03:34:20,948 | INFO     | 
[2025-11-21 22:34:57] 2025-11-22 03:34:20,949 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-11-21 22:34:57] 2025-11-22 03:34:21,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 22:34:57] 2025-11-22 03:34:21,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 22:34:57] 2025-11-22 03:34:21,136 | INFO     | job 6893872776 has completed (purged errors)
[2025-11-21 22:34:57] 2025-11-22 03:34:21,136 | INFO     | overall cleanup function is called
[2025-11-21 22:34:57] 2025-11-22 03:34:21,808 | INFO     | PID=181300 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 22:34:57] 2025-11-22 03:34:21,809 | INFO     | .. there are 32 such processes running
[2025-11-21 22:34:57] 2025-11-22 03:34:22,186 | INFO     | --- collectZombieJob: --- 10, [223286]
[2025-11-21 22:34:57] 2025-11-22 03:34:22,186 | INFO     | zombie collector waiting for pid 223286
[2025-11-21 22:34:57] 2025-11-22 03:34:22,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 22:34:57] 2025-11-22 03:34:22,187 | INFO     | collected zombie processes
[2025-11-21 22:34:57] 2025-11-22 03:34:22,187 | INFO     | will attempt to kill all subprocesses of pid=223286
[2025-11-21 22:34:57] 2025-11-22 03:34:23,521 | INFO     | process IDs to be killed: [223286] (in reverse order)
[2025-11-21 22:34:57] 2025-11-22 03:34:24,193 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 22:34:57] 2025-11-22 03:34:24,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 22:34:57] 2025-11-22 03:34:24,242 | INFO     | did not find any defunct processes belonging to 223286
[2025-11-21 22:34:57] 2025-11-22 03:34:24,285 | INFO     | did not find any defunct processes belonging to 223286
[2025-11-21 22:34:57] 2025-11-22 03:34:24,293 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 22:34:57] 2025-11-22 03:34:24,294 | INFO     | ready for new job
[2025-11-21 22:34:57] 2025-11-22 03:34:24,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 22:34:57] 2025-11-22 03:34:24,297 | INFO     | ***************************************
[2025-11-21 22:34:57] 2025-11-22 03:34:24,298 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 22:34:57] 2025-11-22 03:34:24,298 | INFO     | ***************************************
[2025-11-21 22:34:57] 2025-11-22 03:34:24,298 | INFO     | 
[2025-11-21 22:34:57] 2025-11-22 03:34:24,339 | INFO     | architecture information:
[2025-11-21 22:34:57] 2025-11-22 03:34:24,352 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:34:57] 2025-11-22 03:34:24,433 | INFO     | cat /etc/os-release:
[2025-11-21 22:34:57] NAME="CentOS Linux"
[2025-11-21 22:34:57] VERSION="7 (Core)"
[2025-11-21 22:34:57] ID="centos"
[2025-11-21 22:34:57] ID_LIKE="rhel fedora"
[2025-11-21 22:34:57] VERSION_ID="7"
[2025-11-21 22:34:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:34:57] ANSI_COLOR="0;31"
[2025-11-21 22:34:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:34:57] HOME_URL="https://www.centos.org/"
[2025-11-21 22:34:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:34:57] 
[2025-11-21 22:34:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:34:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:34:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:34:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:34:57] 
[2025-11-21 22:34:57] 2025-11-22 03:34:24,433 | INFO     | ***************************************
[2025-11-21 22:34:57] 2025-11-22 03:34:24,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-11-21 22:34:57] 2025-11-22 03:34:24,994 | INFO     | sufficient remaining disk space (159311200256 B)
[2025-11-21 22:34:57] 2025-11-22 03:34:24,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:34:57] 2025-11-22 03:34:24,994 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:34:57] 2025-11-22 03:34:24,994 | INFO     | update_server=False
[2025-11-21 22:34:57] 2025-11-22 03:34:24,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:34:57] 2025-11-22 03:34:25,093 | INFO     | all payload control threads have been joined
[2025-11-21 22:34:57] 2025-11-22 03:34:25,274 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 22:34:57] 2025-11-22 03:34:25,275 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 22:34:57] 2025-11-22 03:34:25,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:34:57] 2025-11-22 03:34:25,275 | INFO     | will abort loop
[2025-11-21 22:34:57] 2025-11-22 03:34:25,312 | INFO     | all data control threads have been joined
[2025-11-21 22:34:57] 2025-11-22 03:34:25,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:34:57] 2025-11-22 03:34:25,600 | INFO     | all job control threads have been joined
[2025-11-21 22:34:57] 2025-11-22 03:34:25,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:34:57] 2025-11-22 03:34:25,999 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:26,099 | INFO     | [payload] control thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:26,276 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:26,280 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:26,318 | INFO     | [data] control thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:26,608 | INFO     | [job] control thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:26,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:26,692 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:26,957 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:27,194 | INFO     | [job] validate thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:27,195 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:27,228 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:27,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:34:57] 2025-11-22 03:34:27,476 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:27,571 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:27,572 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:31,265 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:34:57] 2025-11-22 03:34:36,552 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:34:57] 2025-11-22 03:34:37,900 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704127473472)>', '<ExcThread(monitor, started 139703189755648)>']
[2025-11-21 22:34:57] 2025-11-22 03:34:42,925 | INFO     | all workflow threads have been joined
[2025-11-21 22:34:57] 2025-11-22 03:34:42,925 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:34:57] 2025-11-22 03:34:42,926 | INFO     | traces error code: 0
[2025-11-21 22:34:57] 2025-11-22 03:34:42,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:34:57] 2025-11-22 03:34:54,858 | INFO     | PID=181300 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 22:34:57] 2025-11-22 03:34:54,858 | INFO     | .. there are 32 such processes running
[2025-11-21 22:34:57] 2025-11-22 03:34:54,867 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:34:57] 2025-11-22 03:34:54,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:34:57] 2025-11-22 03:34:54,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:34:57] 2025-11-22 03:34:54,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:34:57] 2025-11-22 03:34:54,868 | INFO     | [monitor] control thread has ended
[2025-11-21 22:34:57] 2025-11-22 03:34:55,837 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:34:57] 2025-11-22 03:34:55,873 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:34:57] 2025-11-22 03:34:55,969 [wrapper] pilotpid: 181300
[2025-11-21 22:34:57] 2025-11-22 03:34:56,000 [wrapper] Pilot exit status: 0
[2025-11-21 22:34:57] 2025-11-22 03:34:56,140 [wrapper] pandaids: 6893872776
[2025-11-21 22:34:57] 2025-11-22 03:34:56,368 [wrapper] cleanup supervisor_pilot 2481020 181301
[2025-11-21 22:34:57] 2025-11-22 03:34:56,388 [wrapper] Test setup, not cleaning
[2025-11-21 22:34:57] 2025-11-22 03:34:56,390 [wrapper] apfmon messages muted
[2025-11-21 22:34:57] 2025-11-22 03:34:56,393 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:34:57] 2025-11-22 03:34:56,416 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:34:57]  *** Error codes and diagnostics ***
[2025-11-21 22:34:57]     "exeErrorCode": 0,
[2025-11-21 22:34:57]     "exeErrorDiag": "",
[2025-11-21 22:34:57]     "pilotErrorCode": 0,
[2025-11-21 22:34:57]     "pilotErrorDiag": "",
[2025-11-21 22:34:57]  *** Listing of results directory ***
[2025-11-21 22:34:57] total 1314676
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 10:07 pilot3.tar.gz
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 10:20 queuedata.json
[2025-11-21 22:34:57] -rwx------. 1 boincer umatlas     36292 Nov 20 10:22 runpilot2-wrapper.sh
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas       100 Nov 21 12:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:34:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 12:50 run_atlas
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas       105 Nov 21 12:50 job.xml
[2025-11-21 22:34:57] -rw-r--r--. 2 boincer umatlas 410291975 Nov 21 12:50 EVNT.47493127._000683.pool.root.1
[2025-11-21 22:34:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 12:50 start_atlas.sh
[2025-11-21 22:34:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 12:50 shared
[2025-11-21 22:34:57] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 12:50 input.tar.gz
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas         0 Nov 21 12:50 boinc_lockfile
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 12:50 pandaJob.out
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas        57 Nov 21 12:50 setup.sh.local
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas    989798 Nov 21 12:51 agis_schedconf.cvmfs.json
[2025-11-21 22:34:57] drwx------. 5 boincer umatlas      4096 Nov 21 12:51 pilot3
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas       533 Nov 21 22:07 boinc_task_state.xml
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas      7177 Nov 21 22:30 init_data.xml
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas 919439574 Nov 21 22:32 HITS.47523449._006826.pool.root.1
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas      1065 Nov 21 22:33 memory_monitor_summary.json
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas   1526164 Nov 21 22:33 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas   1802893 Nov 21 22:33 log.47523449._006826.job.log.tgz.1
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas      8625 Nov 21 22:34 heartbeat.json
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas        95 Nov 21 22:34 pilot_heartbeat.json
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas       822 Nov 21 22:34 pilotlog.txt
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 22:34 boinc_mmap_file
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas        29 Nov 21 22:34 wrapper_checkpoint.txt
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas   4482939 Nov 21 22:34 log.47523449._006826.job.log.1
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas       353 Nov 21 22:34 output.list
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas       620 Nov 21 22:34 runtime_log
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas   6307840 Nov 21 22:34 result.tar.gz
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas      9361 Nov 21 22:34 runtime_log.err
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas       666 Nov 21 22:34 dEMODmhfLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8CIKDmgfRaIo.diag
[2025-11-21 22:34:57] -rw-r--r--. 1 boincer umatlas     21829 Nov 21 22:34 stderr.txt
[2025-11-21 22:34:57] HITS file was successfully produced:
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas 919439574 Nov 21 22:32 shared/HITS.pool.root.1
[2025-11-21 22:34:57]  *** Contents of shared directory: ***
[2025-11-21 22:34:57] total 1305332
[2025-11-21 22:34:57] -rw-r--r--. 2 boincer umatlas 410291975 Nov 21 12:50 ATLAS.root_0
[2025-11-21 22:34:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 12:50 start_atlas.sh
[2025-11-21 22:34:57] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 12:50 input.tar.gz
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas 919439574 Nov 21 22:32 HITS.pool.root.1
[2025-11-21 22:34:57] -rw-------. 1 boincer umatlas   6307840 Nov 21 22:34 result.tar.gz
22:34:58 (170153): run_atlas exited; CPU time 138294.740347
22:34:58 (170153): called boinc_finish(0)

</stderr_txt>
]]>

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