Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:47 (1277186): wrapper (7.7.26015): starting
00:01:47 (1277186): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 00:01:47] Arguments: --nthreads 12
[2025-11-22 00:01:47] Threads: 12
[2025-11-22 00:01:47] Checking for CVMFS
[2025-11-22 00:01:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:01:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:01:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:01:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:01:49] 2.13.2.0 5670 26700 134772 153159 0 365 23406306 40960000 8761 16776704 0 19931586 99.746 10162948 28106 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 00:01:49] CVMFS is ok
[2025-11-22 00:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 00:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 00:01:49] Further information can be found at the LHC@home message board.
[2025-11-22 00:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:01:49] Checking for apptainer binary...
[2025-11-22 00:01:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:01:49] Running /usr/bin/apptainer --version
[2025-11-22 00:01:50] apptainer version 1.4.4-1.el9
[2025-11-22 00:01:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:01:50] c-211-8.aglt2.org
[2025-11-22 00:01:50] apptainer works
[2025-11-22 00:01:50] Set ATHENA_PROC_NUMBER=12
[2025-11-22 00:01:50] Set ATHENA_CORE_NUMBER=12
[2025-11-22 00:01:50] Starting ATLAS job with PandaID=6894257886
[2025-11-22 00:01:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 09:57:16]  *** The last 200 lines of the pilot log: ***
[2025-11-23 09:57:16] 2025-11-23 14:56:00,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:57:16] 2025-11-23 14:56:00,556 | INFO     | PID=1282584 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 09:57:16] 2025-11-23 14:56:00,557 | INFO     | .. there are 10 such processes running
[2025-11-23 09:57:16] 2025-11-23 14:56:01,558 | INFO     | time since job start (121994s) is within the limit (172800.0s)
[2025-11-23 09:57:16] 2025-11-23 14:56:02,878 | INFO     | monitor loop #7686: job 0:6894257886 is in state 'finished'
[2025-11-23 09:57:16] 2025-11-23 14:56:02,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:57:16] 2025-11-23 14:56:03,565 | INFO     | time since job start (121996s) is within the limit (172800.0s)
[2025-11-23 09:57:16] 2025-11-23 14:56:05,417 | INFO     | monitor loop #7687: job 0:6894257886 is in state 'finished'
[2025-11-23 09:57:16] 2025-11-23 14:56:05,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:57:16] 2025-11-23 14:56:05,581 | INFO     | time since job start (121998s) is within the limit (172800.0s)
[2025-11-23 09:57:16] 2025-11-23 14:56:07,588 | INFO     | time since job start (122000s) is within the limit (172800.0s)
[2025-11-23 09:57:16] 2025-11-23 14:56:07,934 | INFO     | monitor loop #7688: job 0:6894257886 is in state 'finished'
[2025-11-23 09:57:16] 2025-11-23 14:56:07,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:57:16] 2025-11-23 14:56:09,596 | INFO     | time since job start (122002s) is within the limit (172800.0s)
[2025-11-23 09:57:16] 2025-11-23 14:56:10,090 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 09:57:16] 2025-11-23 14:56:10,131 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2463.594770833333
[2025-11-23 09:57:16] 2025-11-23 14:56:10,141 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894257886/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 09:57:16] 2025-11-23 14:56:10,142 | INFO     | extracted standard info from prmon json
[2025-11-23 09:57:16] 2025-11-23 14:56:10,142 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 09:57:16] 2025-11-23 14:56:10,142 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 09:57:16] 2025-11-23 14:56:10,467 | INFO     | fitting pss+swap vs Time
[2025-11-23 09:57:16] 2025-11-23 14:56:10,475 | INFO     | sum of square deviations: 2469566396625.814
[2025-11-23 09:57:16] 2025-11-23 14:56:10,491 | INFO     | monitor loop #7689: job 0:6894257886 is in state 'finished'
[2025-11-23 09:57:16] 2025-11-23 14:56:10,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:57:16] 2025-11-23 14:56:10,719 | INFO     | sum of deviations: 6342179634387.987
[2025-11-23 09:57:16] 2025-11-23 14:56:10,720 | INFO     | mean x: 1763848766.116675
[2025-11-23 09:57:16] 2025-11-23 14:56:10,720 | INFO     | mean y: 3447551.931397096
[2025-11-23 09:57:16] 2025-11-23 14:56:10,720 | INFO     | intersect: -4526354010.759911
[2025-11-23 09:57:16] 2025-11-23 14:56:10,725 | INFO     | chi2: 48.747919041765044
[2025-11-23 09:57:16] 2025-11-23 14:56:10,776 | INFO     | sum of square deviations: 2451065960918.1206
[2025-11-23 09:57:16] 2025-11-23 14:56:11,024 | INFO     | sum of deviations: 7322331084449.588
[2025-11-23 09:57:16] 2025-11-23 14:56:11,025 | INFO     | mean x: 1763848613.626506
[2025-11-23 09:57:16] 2025-11-23 14:56:11,025 | INFO     | mean y: 3455630.8945783135
[2025-11-23 09:57:16] 2025-11-23 14:56:11,025 | INFO     | intersect: -5265877686.835799
[2025-11-23 09:57:16] 2025-11-23 14:56:11,032 | INFO     | chi2: 43.63633742329561
[2025-11-23 09:57:16] 2025-11-23 14:56:11,033 | INFO     | current chi2=43.63633742329561 (change=10.4857432254494 %)
[2025-11-23 09:57:16] 2025-11-23 14:56:11,033 | INFO     | right removable region: 1991
[2025-11-23 09:57:16] 2025-11-23 14:56:11,040 | INFO     | sum of square deviations: 2451061067795.867
[2025-11-23 09:57:16] 2025-11-23 14:56:11,388 | INFO     | sum of deviations: 5470314583156.653
[2025-11-23 09:57:16] 2025-11-23 14:56:11,392 | INFO     | mean x: 1763848918.627008
[2025-11-23 09:57:16] 2025-11-23 14:56:11,393 | INFO     | mean y: 3454735.9618473896
[2025-11-23 09:57:16] 2025-11-23 14:56:11,393 | INFO     | intersect: -3933129541.282281
[2025-11-23 09:57:16] 2025-11-23 14:56:11,408 | INFO     | chi2: 45.550312222603445
[2025-11-23 09:57:16] 2025-11-23 14:56:11,408 | INFO     | current chi2=45.550312222603445 (change=6.559473475005224 %)
[2025-11-23 09:57:16] 2025-11-23 14:56:11,409 | INFO     | left removable region: 10
[2025-11-23 09:57:16] 2025-11-23 14:56:11,412 | INFO     | sum of square deviations: 2410681536130.96
[2025-11-23 09:57:16] 2025-11-23 14:56:11,559 | INFO     | sum of deviations: 6262198675790.345
[2025-11-23 09:57:16] 2025-11-23 14:56:11,560 | INFO     | mean x: 1763848888.1474004
[2025-11-23 09:57:16] 2025-11-23 14:56:11,560 | INFO     | mean y: 3467020.659767794
[2025-11-23 09:57:16] 2025-11-23 14:56:11,560 | INFO     | intersect: -4578462199.812294
[2025-11-23 09:57:16] 2025-11-23 14:56:11,563 | INFO     | chi2: 39.26919681724023
[2025-11-23 09:57:16] 2025-11-23 14:56:11,564 | INFO     | current memory leak: 2.60 B/s (using 1981 data points, chi2=39.27)
[2025-11-23 09:57:16] 2025-11-23 14:56:11,566 | INFO     | could have reported an average CPU frequency of 2589 MHz (70 samples)
[2025-11-23 09:57:16] 2025-11-23 14:56:11,566 | INFO     | ..............................
[2025-11-23 09:57:16] 2025-11-23 14:56:11,566 | INFO     | . Timing measurements:
[2025-11-23 09:57:16] 2025-11-23 14:56:11,566 | INFO     | . get job = 0 s
[2025-11-23 09:57:16] 2025-11-23 14:56:11,566 | INFO     | . initial setup = 5 s
[2025-11-23 09:57:16] 2025-11-23 14:56:11,567 | INFO     | . payload setup = 35 s
[2025-11-23 09:57:16] 2025-11-23 14:56:11,567 | INFO     | . stage-in = 0 s
[2025-11-23 09:57:16] 2025-11-23 14:56:11,567 | INFO     | . payload execution = 121829 s
[2025-11-23 09:57:16] 2025-11-23 14:56:11,567 | INFO     | . stage-out = 25 s
[2025-11-23 09:57:16] 2025-11-23 14:56:11,567 | INFO     | . log creation = 5 s
[2025-11-23 09:57:16] 2025-11-23 14:56:11,567 | INFO     | ..............................
[2025-11-23 09:57:16] 2025-11-23 14:56:11,672 | INFO     | time since job start (122004s) is within the limit (172800.0s)
[2025-11-23 09:57:16] 2025-11-23 14:56:11,985 | INFO     | 
[2025-11-23 09:57:16] 2025-11-23 14:56:11,985 | INFO     | job summary report
[2025-11-23 09:57:16] 2025-11-23 14:56:11,986 | INFO     | --------------------------------------------------
[2025-11-23 09:57:16] 2025-11-23 14:56:11,986 | INFO     | PanDA job id: 6894257886
[2025-11-23 09:57:16] 2025-11-23 14:56:11,986 | INFO     | task id: 47533967
[2025-11-23 09:57:16] 2025-11-23 14:56:11,986 | INFO     | errors: (none)
[2025-11-23 09:57:16] 2025-11-23 14:56:11,986 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 09:57:16] 2025-11-23 14:56:11,986 | INFO     | pilot state: finished 
[2025-11-23 09:57:16] 2025-11-23 14:56:11,986 | INFO     | transexitcode: 0
[2025-11-23 09:57:16] 2025-11-23 14:56:11,986 | INFO     | exeerrorcode: 0
[2025-11-23 09:57:16] 2025-11-23 14:56:11,987 | INFO     | exeerrordiag: 
[2025-11-23 09:57:16] 2025-11-23 14:56:11,987 | INFO     | exitcode: 0
[2025-11-23 09:57:16] 2025-11-23 14:56:11,987 | INFO     | exitmsg: OK
[2025-11-23 09:57:16] 2025-11-23 14:56:11,987 | INFO     | cpuconsumptiontime: 346832 s
[2025-11-23 09:57:16] 2025-11-23 14:56:11,987 | INFO     | nevents: 1000
[2025-11-23 09:57:16] 2025-11-23 14:56:11,987 | INFO     | neventsw: 0
[2025-11-23 09:57:16] 2025-11-23 14:56:11,987 | INFO     | pid: 1298172
[2025-11-23 09:57:16] 2025-11-23 14:56:11,987 | INFO     | pgrp: 1298172
[2025-11-23 09:57:16] 2025-11-23 14:56:11,988 | INFO     | corecount: 12
[2025-11-23 09:57:16] 2025-11-23 14:56:11,988 | INFO     | event service: False
[2025-11-23 09:57:16] 2025-11-23 14:56:11,988 | INFO     | sizes: {0: 2297928, 1: 2298613, 2: 2298613, 3: 2298840, 4: 2298840, 15: 2298868, 25: 2299024, 29: 2299314, 36: 2299342, 121867: 2380793, 121895: 2389787, 121898: 2
[2025-11-23 09:57:16] 2025-11-23 14:56:11,988 | INFO     | --------------------------------------------------
[2025-11-23 09:57:16] 2025-11-23 14:56:11,988 | INFO     | 
[2025-11-23 09:57:16] 2025-11-23 14:56:11,988 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 09:57:16] 2025-11-23 14:56:12,150 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,153 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 09:57:16] 2025-11-23 14:56:12,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,153 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 09:57:16] 2025-11-23 14:56:12,153 | INFO     | job 6894257886 has completed (purged errors)
[2025-11-23 09:57:16] 2025-11-23 14:56:12,153 | INFO     | overall cleanup function is called
[2025-11-23 09:57:16] 2025-11-23 14:56:13,219 | INFO     | --- collectZombieJob: --- 10, [1298172]
[2025-11-23 09:57:16] 2025-11-23 14:56:13,219 | INFO     | zombie collector waiting for pid 1298172
[2025-11-23 09:57:16] 2025-11-23 14:56:13,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 09:57:16] 2025-11-23 14:56:13,220 | INFO     | collected zombie processes
[2025-11-23 09:57:16] 2025-11-23 14:56:13,220 | INFO     | will attempt to kill all subprocesses of pid=1298172
[2025-11-23 09:57:16] 2025-11-23 14:56:15,307 | INFO     | process IDs to be killed: [1298172] (in reverse order)
[2025-11-23 09:57:16] 2025-11-23 14:56:15,708 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 09:57:16] 2025-11-23 14:56:15,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 09:57:16] 2025-11-23 14:56:15,876 | INFO     | did not find any defunct processes belonging to 1298172
[2025-11-23 09:57:16] 2025-11-23 14:56:16,024 | INFO     | did not find any defunct processes belonging to 1298172
[2025-11-23 09:57:16] 2025-11-23 14:56:16,087 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 09:57:16] 2025-11-23 14:56:16,088 | INFO     | ready for new job
[2025-11-23 09:57:16] 2025-11-23 14:56:16,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 09:57:16] 2025-11-23 14:56:16,099 | INFO     | ***************************************
[2025-11-23 09:57:16] 2025-11-23 14:56:16,103 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 09:57:16] 2025-11-23 14:56:16,103 | INFO     | ***************************************
[2025-11-23 09:57:16] 2025-11-23 14:56:16,104 | INFO     | 
[2025-11-23 09:57:16] 2025-11-23 14:56:16,111 | INFO     | architecture information:
[2025-11-23 09:57:16] 2025-11-23 14:56:16,112 | INFO     | executing command: cat /etc/os-release
[2025-11-23 09:57:16] 2025-11-23 14:56:16,256 | INFO     | cat /etc/os-release:
[2025-11-23 09:57:16] NAME="CentOS Linux"
[2025-11-23 09:57:16] VERSION="7 (Core)"
[2025-11-23 09:57:16] ID="centos"
[2025-11-23 09:57:16] ID_LIKE="rhel fedora"
[2025-11-23 09:57:16] VERSION_ID="7"
[2025-11-23 09:57:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 09:57:16] ANSI_COLOR="0;31"
[2025-11-23 09:57:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 09:57:16] HOME_URL="https://www.centos.org/"
[2025-11-23 09:57:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 09:57:16] 
[2025-11-23 09:57:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 09:57:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 09:57:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 09:57:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 09:57:16] 
[2025-11-23 09:57:16] 2025-11-23 14:56:16,257 | INFO     | ***************************************
[2025-11-23 09:57:16] 2025-11-23 14:56:16,760 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 09:57:16] 2025-11-23 14:56:16,849 | INFO     | sufficient remaining disk space (60046704640 B)
[2025-11-23 09:57:16] 2025-11-23 14:56:16,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 09:57:16] 2025-11-23 14:56:16,849 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 09:57:16] 2025-11-23 14:56:16,849 | INFO     | update_server=False
[2025-11-23 09:57:16] 2025-11-23 14:56:16,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 09:57:16] 2025-11-23 14:56:16,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 09:57:16] 2025-11-23 14:56:16,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:57:16] 2025-11-23 14:56:16,850 | INFO     | aborting loop
[2025-11-23 09:57:16] 2025-11-23 14:56:16,897 | INFO     | all data control threads have been joined
[2025-11-23 09:57:16] 2025-11-23 14:56:16,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:57:16] 2025-11-23 14:56:17,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 09:57:16] 2025-11-23 14:56:17,068 | INFO     | all job control threads have been joined
[2025-11-23 09:57:16] 2025-11-23 14:56:17,855 | INFO     | [job] retrieve thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:17,864 | INFO     | [job] job monitor thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:17,903 | INFO     | [data] control thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:17,935 | INFO     | [job] queue monitor thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:18,062 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:18,066 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:18,074 | INFO     | [job] control thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:18,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:18,350 | INFO     | [payload] failed_post thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:18,364 | INFO     | all payload control threads have been joined
[2025-11-23 09:57:16] 2025-11-23 14:56:18,453 | INFO     | [payload] validate_post thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:18,677 | INFO     | [job] validate thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:18,685 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:19,053 | INFO     | [data] copytool_out thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:19,184 | INFO     | [data] copytool_in thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:19,370 | INFO     | [payload] control thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:20,859 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 09:57:16] 2025-11-23 14:56:29,745 | INFO     | [monitor] cgroup control has ended
[2025-11-23 09:57:16] 2025-11-23 14:56:31,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168017000256)>', '<ExcThread(monitor, started 140167390160640)>']
[2025-11-23 09:57:16] 2025-11-23 14:56:36,774 | INFO     | all workflow threads have been joined
[2025-11-23 09:57:16] 2025-11-23 14:56:36,799 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 09:57:16] 2025-11-23 14:56:36,800 | INFO     | traces error code: 0
[2025-11-23 09:57:16] 2025-11-23 14:56:36,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 09:57:16] 2025-11-23 14:56:48,538 | INFO     | PID=1282584 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 09:57:16] 2025-11-23 14:56:48,538 | INFO     | .. there are 10 such processes running
[2025-11-23 09:57:16] 2025-11-23 14:56:48,539 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 09:57:16] 2025-11-23 14:56:48,539 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 09:57:16] 2025-11-23 14:56:48,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 09:57:16] 2025-11-23 14:56:48,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 09:57:16] 2025-11-23 14:56:48,571 | INFO     | [monitor] control thread has ended
[2025-11-23 09:57:16] 2025-11-23 14:56:53,628 [wrapper] ==== pilot stdout END ====
[2025-11-23 09:57:16] 2025-11-23 14:56:53,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 09:57:16] 2025-11-23 14:56:53,702 [wrapper] pilotpid: 1282584
[2025-11-23 09:57:16] 2025-11-23 14:56:53,705 [wrapper] Pilot exit status: 0
[2025-11-23 09:57:16] 2025-11-23 14:56:54,325 [wrapper] pandaids: 6894257886
[2025-11-23 09:57:16] 2025-11-23 14:56:55,115 [wrapper] cleanup supervisor_pilot 4125735 1282585
[2025-11-23 09:57:16] 2025-11-23 14:56:55,128 [wrapper] Test setup, not cleaning
[2025-11-23 09:57:16] 2025-11-23 14:56:55,137 [wrapper] apfmon messages muted
[2025-11-23 09:57:16] 2025-11-23 14:56:55,141 [wrapper] ==== wrapper stdout END ====
[2025-11-23 09:57:16] 2025-11-23 14:56:55,144 [wrapper] ==== wrapper stderr END ====
[2025-11-23 09:57:16]  *** Error codes and diagnostics ***
[2025-11-23 09:57:16]     "exeErrorCode": 0,
[2025-11-23 09:57:16]     "exeErrorDiag": "",
[2025-11-23 09:57:16]     "pilotErrorCode": 0,
[2025-11-23 09:57:16]     "pilotErrorDiag": "",
[2025-11-23 09:57:16]  *** Listing of results directory ***
[2025-11-23 09:57:16] total 1325760
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 22:09 pilot3.tar.gz
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 22:31 queuedata.json
[2025-11-23 09:57:16] -rwx------. 1 boincer umatlas     36292 Nov 20 22:34 runpilot2-wrapper.sh
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas       100 Nov 22 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 09:57:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 00:01 run_atlas
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas       105 Nov 22 00:01 job.xml
[2025-11-23 09:57:16] -rw-r--r--. 2 boincer umatlas 410153210 Nov 22 00:01 EVNT.47493127._002165.pool.root.1
[2025-11-23 09:57:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 00:01 start_atlas.sh
[2025-11-23 09:57:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 00:01 shared
[2025-11-23 09:57:16] -rw-r--r--. 2 boincer umatlas    590103 Nov 22 00:01 input.tar.gz
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas         0 Nov 22 00:01 boinc_lockfile
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas      2785 Nov 22 00:01 pandaJob.out
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas        57 Nov 22 00:01 setup.sh.local
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas    989752 Nov 22 00:02 agis_schedconf.cvmfs.json
[2025-11-23 09:57:16] drwx------. 5 boincer umatlas      4096 Nov 22 00:02 pilot3
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas       533 Nov 23 08:45 boinc_task_state.xml
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas 905330994 Nov 23 09:49 HITS.47533967._001368.pool.root.1
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas      6614 Nov 23 09:54 init_data.xml
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas      1077 Nov 23 09:54 memory_monitor_summary.json
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas   1526164 Nov 23 09:55 agis_ddmendpoints.agis.ALL.json
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas   3354618 Nov 23 09:55 log.47533967._001368.job.log.tgz.1
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas        95 Nov 23 09:56 pilot_heartbeat.json
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas      8674 Nov 23 09:56 heartbeat.json
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas       823 Nov 23 09:56 pilotlog.txt
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas  15729805 Nov 23 09:56 log.47533967._001368.job.log.1
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas       353 Nov 23 09:56 output.list
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas       620 Nov 23 09:56 runtime_log
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas  19107840 Nov 23 09:56 result.tar.gz
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas      9341 Nov 23 09:56 runtime_log.err
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas       668 Nov 23 09:56 B5uLDmg5Wg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmByIKDmqMIJgn.diag
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas        29 Nov 23 09:57 wrapper_checkpoint.txt
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 09:57 boinc_mmap_file
[2025-11-23 09:57:16] -rw-r--r--. 1 boincer umatlas     21900 Nov 23 09:57 stderr.txt
[2025-11-23 09:57:16] HITS file was successfully produced:
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas 905330994 Nov 23 09:49 shared/HITS.pool.root.1
[2025-11-23 09:57:16]  *** Contents of shared directory: ***
[2025-11-23 09:57:16] total 1303920
[2025-11-23 09:57:16] -rw-r--r--. 2 boincer umatlas 410153210 Nov 22 00:01 ATLAS.root_0
[2025-11-23 09:57:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 00:01 start_atlas.sh
[2025-11-23 09:57:16] -rw-r--r--. 2 boincer umatlas    590103 Nov 22 00:01 input.tar.gz
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas 905330994 Nov 23 09:49 HITS.pool.root.1
[2025-11-23 09:57:16] -rw-------. 1 boincer umatlas  19107840 Nov 23 09:56 result.tar.gz
09:57:18 (1277186): run_atlas exited; CPU time 348005.620271
09:57:18 (1277186): called boinc_finish(0)

</stderr_txt>
]]>

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