Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:12:14 (2146933): wrapper (7.7.26015): starting
07:12:14 (2146933): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 07:12:14] Arguments: --nthreads 8
[2025-11-22 07:12:15] Threads: 8
[2025-11-22 07:12:15] Checking for CVMFS
[2025-11-22 07:12:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 07:12:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 07:12:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 07:12:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 07:12:16] 2.13.2.0 6111 28661 270212 153171 2 101 37503187 40960000 11827 16776704 0 25105190 99.716 18503911 39185 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 07:12:16] CVMFS is ok
[2025-11-22 07:12:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 07:12:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 07:12:16] Further information can be found at the LHC@home message board.
[2025-11-22 07:12:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 07:12:16] Checking for apptainer binary...
[2025-11-22 07:12:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 07:12:16] Running /usr/bin/apptainer --version
[2025-11-22 07:12:16] apptainer version 1.4.4-1.el9
[2025-11-22 07:12:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 07:12:16] c-210-35-3.aglt2.org
[2025-11-22 07:12:16] apptainer works
[2025-11-22 07:12:17] Set ATHENA_PROC_NUMBER=8
[2025-11-22 07:12:17] Set ATHENA_CORE_NUMBER=8
[2025-11-22 07:12:17] Starting ATLAS job with PandaID=6894257116
[2025-11-22 07:12:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:45:35 (3166081): wrapper (7.7.26015): starting
19:45:35 (3166081): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 19:45:35] Arguments: --nthreads 9
[2025-11-22 19:45:35] Threads: 9
[2025-11-22 19:45:35] This job has been restarted, cleaning up previous attempt
[2025-11-22 19:45:36] Checking for CVMFS
[2025-11-22 19:45:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:45:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:45:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:45:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:45:37] 2.13.2.0 6111 29414 260500 153191 1 86 39284771 40960000 10357 16776704 0 26292162 99.721 18722938 38998 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 19:45:37] CVMFS is ok
[2025-11-22 19:45:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:45:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:45:37] Further information can be found at the LHC@home message board.
[2025-11-22 19:45:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:45:37] Checking for apptainer binary...
[2025-11-22 19:45:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 19:45:37] Running /usr/bin/apptainer --version
[2025-11-22 19:45:37] apptainer version 1.4.4-1.el9
[2025-11-22 19:45:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:45:38] c-210-35-3.aglt2.org
[2025-11-22 19:45:38] apptainer works
[2025-11-22 19:45:38] Set ATHENA_PROC_NUMBER=9
[2025-11-22 19:45:38] Set ATHENA_CORE_NUMBER=9
[2025-11-22 19:45:38] Starting ATLAS job with PandaID=6894257116
[2025-11-22 19:45:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:01:36 (3392083): wrapper (7.7.26015): starting
22:01:36 (3392083): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:01:36] Arguments: --nthreads 8
[2025-11-22 22:01:36] Threads: 8
[2025-11-22 22:01:36] This job has been restarted, cleaning up previous attempt
[2025-11-22 22:01:36] Checking for CVMFS
[2025-11-22 22:01:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:01:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:01:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:01:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:01:37] 2.13.2.0 6111 29550 281020 153193 2 439 40123156 40960000 8996 16776704 0 26616350 99.717 18890866 38808 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 22:01:37] CVMFS is ok
[2025-11-22 22:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 22:01:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 22:01:37] Further information can be found at the LHC@home message board.
[2025-11-22 22:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:01:37] Checking for apptainer binary...
[2025-11-22 22:01:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:01:37] Running /usr/bin/apptainer --version
[2025-11-22 22:01:37] apptainer version 1.4.4-1.el9
[2025-11-22 22:01:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:01:38] c-210-35-3.aglt2.org
[2025-11-22 22:01:38] apptainer works
[2025-11-22 22:01:40] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:01:40] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:01:40] Starting ATLAS job with PandaID=6894257116
[2025-11-22 22:01:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 20:21:09]  *** The last 200 lines of the pilot log: ***
[2025-11-24 20:21:09] 2025-11-25 01:20:16,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 20:21:09] 2025-11-25 01:20:17,371 | INFO     | time since job start (166705s) is within the limit (172800.0s)
[2025-11-24 20:21:09] 2025-11-25 01:20:18,008 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 20:21:09] 2025-11-25 01:20:18,040 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2607.905196428572
[2025-11-24 20:21:09] 2025-11-25 01:20:18,050 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894257116/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 20:21:09] 2025-11-25 01:20:18,051 | INFO     | extracted standard info from prmon json
[2025-11-24 20:21:09] 2025-11-25 01:20:18,051 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 20:21:09] 2025-11-25 01:20:18,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 20:21:09] 2025-11-25 01:20:18,092 | INFO     | fitting pss+swap vs Time
[2025-11-24 20:21:09] 2025-11-25 01:20:18,096 | INFO     | sum of square deviations: 6329588940280.388
[2025-11-24 20:21:09] 2025-11-25 01:20:18,239 | INFO     | sum of deviations: 15938253550359.717
[2025-11-24 20:21:09] 2025-11-25 01:20:18,239 | INFO     | mean x: 1763950269.2729602
[2025-11-24 20:21:09] 2025-11-25 01:20:18,240 | INFO     | mean y: 2944253.869008416
[2025-11-24 20:21:09] 2025-11-25 01:20:18,240 | INFO     | intersect: -4438779672.780221
[2025-11-24 20:21:09] 2025-11-25 01:20:18,243 | INFO     | chi2: 6.541884028709337
[2025-11-24 20:21:09] 2025-11-25 01:20:18,246 | INFO     | sum of square deviations: 6294914493638.907
[2025-11-24 20:21:09] 2025-11-25 01:20:18,380 | INFO     | sum of deviations: 16899037624298.232
[2025-11-24 20:21:09] 2025-11-25 01:20:18,380 | INFO     | mean x: 1763950116.7807918
[2025-11-24 20:21:09] 2025-11-25 01:20:18,380 | INFO     | mean y: 2948479.2177419355
[2025-11-24 20:21:09] 2025-11-25 01:20:18,380 | INFO     | intersect: -4732470789.937749
[2025-11-24 20:21:09] 2025-11-25 01:20:18,383 | INFO     | chi2: 3.271933160357921
[2025-11-24 20:21:09] 2025-11-25 01:20:18,383 | INFO     | current chi2=3.271933160357921 (change=49.984849226936724 %)
[2025-11-24 20:21:09] 2025-11-25 01:20:18,386 | INFO     | sum of square deviations: 6260366933097.118
[2025-11-24 20:21:09] 2025-11-25 01:20:18,520 | INFO     | sum of deviations: 17191863797557.605
[2025-11-24 20:21:09] 2025-11-25 01:20:18,521 | INFO     | mean x: 1763949964.2886522
[2025-11-24 20:21:09] 2025-11-25 01:20:18,521 | INFO     | mean y: 2949770.676092545
[2025-11-24 20:21:09] 2025-11-25 01:20:18,521 | INFO     | intersect: -4841109348.5159025
[2025-11-24 20:21:09] 2025-11-25 01:20:18,524 | INFO     | chi2: 2.658109059150179
[2025-11-24 20:21:09] 2025-11-25 01:20:18,524 | INFO     | current chi2=2.658109059150179 (change=18.76028852437178 %)
[2025-11-24 20:21:09] 2025-11-25 01:20:18,524 | INFO     | right removable region: 2722
[2025-11-24 20:21:09] 2025-11-25 01:20:18,527 | INFO     | sum of square deviations: 6294907703134.038
[2025-11-24 20:21:09] 2025-11-25 01:20:18,664 | INFO     | sum of deviations: 15263742587182.312
[2025-11-24 20:21:09] 2025-11-25 01:20:18,664 | INFO     | mean x: 1763950421.7800586
[2025-11-24 20:21:09] 2025-11-25 01:20:18,664 | INFO     | mean y: 2947218.2822580645
[2025-11-24 20:21:09] 2025-11-25 01:20:18,664 | INFO     | intersect: -4274237840.5546846
[2025-11-24 20:21:09] 2025-11-25 01:20:18,667 | INFO     | chi2: 4.681005903395866
[2025-11-24 20:21:09] 2025-11-25 01:20:18,667 | INFO     | current chi2=4.681005903395866 (change=28.445599419783775 %)
[2025-11-24 20:21:09] 2025-11-25 01:20:18,670 | INFO     | sum of square deviations: 6260354184153.301
[2025-11-24 20:21:09] 2025-11-25 01:20:18,807 | INFO     | sum of deviations: 15036530994434.932
[2025-11-24 20:21:09] 2025-11-25 01:20:18,807 | INFO     | mean x: 1763950574.285347
[2025-11-24 20:21:09] 2025-11-25 01:20:18,807 | INFO     | mean y: 2948221.037458685
[2025-11-24 20:21:09] 2025-11-25 01:20:18,807 | INFO     | intersect: -4233824444.3225584
[2025-11-24 20:21:09] 2025-11-25 01:20:18,810 | INFO     | chi2: 4.605246005444183
[2025-11-24 20:21:09] 2025-11-25 01:20:18,811 | INFO     | current chi2=4.605246005444183 (change=1.6184533733811968 %)
[2025-11-24 20:21:09] 2025-11-25 01:20:18,811 | INFO     | left removable region: 20
[2025-11-24 20:21:09] 2025-11-25 01:20:18,814 | INFO     | sum of square deviations: 6116623837311.737
[2025-11-24 20:21:09] 2025-11-25 01:20:18,964 | INFO     | sum of deviations: 15904389603693.066
[2025-11-24 20:21:09] 2025-11-25 01:20:18,964 | INFO     | mean x: 1763950543.811251
[2025-11-24 20:21:09] 2025-11-25 01:20:18,965 | INFO     | mean y: 2955349.7883049594
[2025-11-24 20:21:09] 2025-11-25 01:20:18,965 | INFO     | intersect: -4583652791.66484
[2025-11-24 20:21:09] 2025-11-25 01:20:18,968 | INFO     | chi2: 0.64201340347678
[2025-11-24 20:21:09] 2025-11-25 01:20:18,968 | INFO     | current memory leak: 2.60 B/s (using 2702 data points, chi2=0.64)
[2025-11-24 20:21:09] 2025-11-25 01:20:18,971 | INFO     | could have reported an average CPU frequency of 2675 MHz (94 samples)
[2025-11-24 20:21:09] 2025-11-25 01:20:18,971 | INFO     | ..............................
[2025-11-24 20:21:09] 2025-11-25 01:20:18,971 | INFO     | . Timing measurements:
[2025-11-24 20:21:09] 2025-11-25 01:20:18,971 | INFO     | . get job = 0 s
[2025-11-24 20:21:09] 2025-11-25 01:20:18,971 | INFO     | . initial setup = 1 s
[2025-11-24 20:21:09] 2025-11-25 01:20:18,971 | INFO     | . payload setup = 6 s
[2025-11-24 20:21:09] 2025-11-25 01:20:18,971 | INFO     | . stage-in = 0 s
[2025-11-24 20:21:09] 2025-11-25 01:20:18,971 | INFO     | . payload execution = 166658 s
[2025-11-24 20:21:09] 2025-11-25 01:20:18,971 | INFO     | . stage-out = 4 s
[2025-11-24 20:21:09] 2025-11-25 01:20:18,972 | INFO     | . log creation = 1 s
[2025-11-24 20:21:09] 2025-11-25 01:20:18,972 | INFO     | ..............................
[2025-11-24 20:21:09] 2025-11-25 01:20:19,397 | INFO     | time since job start (166707s) is within the limit (172800.0s)
[2025-11-24 20:21:09] 2025-11-25 01:20:19,446 | INFO     | 
[2025-11-24 20:21:09] 2025-11-25 01:20:19,446 | INFO     | job summary report
[2025-11-24 20:21:09] 2025-11-25 01:20:19,446 | INFO     | --------------------------------------------------
[2025-11-24 20:21:09] 2025-11-25 01:20:19,446 | INFO     | PanDA job id: 6894257116
[2025-11-24 20:21:09] 2025-11-25 01:20:19,446 | INFO     | task id: 47533967
[2025-11-24 20:21:09] 2025-11-25 01:20:19,446 | INFO     | errors: (none)
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | pilot state: finished 
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | transexitcode: 0
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | exeerrorcode: 0
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | exeerrordiag: 
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | exitcode: 0
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | exitmsg: OK
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | cpuconsumptiontime: 269242 s
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | nevents: 1000
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | neventsw: 0
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | pid: 3429489
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | pgrp: 3429489
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | corecount: 8
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | event service: False
[2025-11-24 20:21:09] 2025-11-25 01:20:19,447 | INFO     | sizes: {0: 2298807, 6: 2299069, 11: 2299097, 166669: 2402760, 166675: 2412545, 166677: 2412601, 166691: 2412975}
[2025-11-24 20:21:09] 2025-11-25 01:20:19,448 | INFO     | --------------------------------------------------
[2025-11-24 20:21:09] 2025-11-25 01:20:19,448 | INFO     | 
[2025-11-24 20:21:09] 2025-11-25 01:20:19,448 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 20:21:09] 2025-11-25 01:20:19,714 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,715 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,715 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 20:21:09] 2025-11-25 01:20:19,717 | INFO     | job 6894257116 has completed (purged errors)
[2025-11-24 20:21:09] 2025-11-25 01:20:19,717 | INFO     | overall cleanup function is called
[2025-11-24 20:21:09] 2025-11-25 01:20:20,804 | INFO     | --- collectZombieJob: --- 10, [3429489]
[2025-11-24 20:21:09] 2025-11-25 01:20:20,804 | INFO     | zombie collector waiting for pid 3429489
[2025-11-24 20:21:09] 2025-11-25 01:20:20,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 20:21:09] 2025-11-25 01:20:20,804 | INFO     | collected zombie processes
[2025-11-24 20:21:09] 2025-11-25 01:20:20,805 | INFO     | will attempt to kill all subprocesses of pid=3429489
[2025-11-24 20:21:09] 2025-11-25 01:20:21,402 | INFO     | process IDs to be killed: [3429489] (in reverse order)
[2025-11-24 20:21:09] 2025-11-25 01:20:21,770 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 20:21:09] 2025-11-25 01:20:21,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 20:21:09] 2025-11-25 01:20:21,785 | INFO     | did not find any defunct processes belonging to 3429489
[2025-11-24 20:21:09] 2025-11-25 01:20:21,795 | INFO     | did not find any defunct processes belonging to 3429489
[2025-11-24 20:21:09] 2025-11-25 01:20:21,797 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 20:21:09] 2025-11-25 01:20:21,797 | INFO     | ready for new job
[2025-11-24 20:21:09] 2025-11-25 01:20:21,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 20:21:09] 2025-11-25 01:20:21,808 | INFO     | ***************************************
[2025-11-24 20:21:09] 2025-11-25 01:20:21,808 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 20:21:09] 2025-11-25 01:20:21,808 | INFO     | ***************************************
[2025-11-24 20:21:09] 2025-11-25 01:20:21,808 | INFO     | 
[2025-11-24 20:21:09] 2025-11-25 01:20:21,811 | INFO     | architecture information:
[2025-11-24 20:21:09] 2025-11-25 01:20:21,812 | INFO     | executing command: cat /etc/os-release
[2025-11-24 20:21:09] 2025-11-25 01:20:21,839 | INFO     | cat /etc/os-release:
[2025-11-24 20:21:09] NAME="CentOS Linux"
[2025-11-24 20:21:09] VERSION="7 (Core)"
[2025-11-24 20:21:09] ID="centos"
[2025-11-24 20:21:09] ID_LIKE="rhel fedora"
[2025-11-24 20:21:09] VERSION_ID="7"
[2025-11-24 20:21:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 20:21:09] ANSI_COLOR="0;31"
[2025-11-24 20:21:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 20:21:09] HOME_URL="https://www.centos.org/"
[2025-11-24 20:21:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 20:21:09] 
[2025-11-24 20:21:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 20:21:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 20:21:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 20:21:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 20:21:09] 
[2025-11-24 20:21:09] 2025-11-25 01:20:21,839 | INFO     | ***************************************
[2025-11-24 20:21:09] 2025-11-25 01:20:22,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 20:21:09] 2025-11-25 01:20:22,433 | INFO     | sufficient remaining disk space (71077724160 B)
[2025-11-24 20:21:09] 2025-11-25 01:20:22,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 20:21:09] 2025-11-25 01:20:22,445 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 20:21:09] 2025-11-25 01:20:22,445 | INFO     | update_server=False
[2025-11-24 20:21:09] 2025-11-25 01:20:22,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 20:21:09] 2025-11-25 01:20:22,669 | INFO     | all payload control threads have been joined
[2025-11-24 20:21:09] 2025-11-25 01:20:22,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:21:09] 2025-11-25 01:20:22,690 | INFO     | aborting loop
[2025-11-24 20:21:09] 2025-11-25 01:20:23,306 | INFO     | all job control threads have been joined
[2025-11-24 20:21:09] 2025-11-25 01:20:23,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 20:21:09] 2025-11-25 01:20:23,394 | INFO     | all data control threads have been joined
[2025-11-24 20:21:09] 2025-11-25 01:20:23,451 | INFO     | [job] retrieve thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:23,494 | INFO     | [payload] failed_post thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:23,675 | INFO     | [payload] control thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:23,676 | INFO     | [payload] validate_post thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:23,696 | INFO     | [job] job monitor thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:23,818 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:24,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:21:09] 2025-11-25 01:20:24,312 | INFO     | [job] control thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:24,400 | INFO     | [data] control thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:24,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:24,634 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:24,634 | INFO     | [job] validate thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:24,642 | INFO     | [data] copytool_in thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:24,940 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:24,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 20:21:09] 2025-11-25 01:20:25,140 | INFO     | [job] queue monitor thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:25,398 | INFO     | [data] copytool_out thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:28,964 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 20:21:09] 2025-11-25 01:20:52,964 | INFO     | PID=3403747 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 20:21:09] 2025-11-25 01:20:52,964 | INFO     | .. there are 10 such processes running
[2025-11-24 20:21:09] 2025-11-25 01:20:52,965 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 20:21:09] 2025-11-25 01:20:52,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 20:21:09] 2025-11-25 01:20:52,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 20:21:09] 2025-11-25 01:20:59,638 | INFO     | [monitor] cgroup control has ended
[2025-11-24 20:21:09] 2025-11-25 01:21:01,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524762048320)>', '<ExcThread(monitor, started 140524124096256)>']
[2025-11-24 20:21:09] 2025-11-25 01:21:02,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 20:21:09] 2025-11-25 01:21:02,020 | INFO     | [monitor] control thread has ended
[2025-11-24 20:21:09] 2025-11-25 01:21:06,570 | INFO     | all workflow threads have been joined
[2025-11-24 20:21:09] 2025-11-25 01:21:06,570 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 20:21:09] 2025-11-25 01:21:06,571 | INFO     | traces error code: 0
[2025-11-24 20:21:09] 2025-11-25 01:21:06,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 20:21:09] 2025-11-25 01:21:09,233 [wrapper] ==== pilot stdout END ====
[2025-11-24 20:21:09] 2025-11-25 01:21:09,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 20:21:09] 2025-11-25 01:21:09,276 [wrapper] pilotpid: 3403747
[2025-11-24 20:21:09] 2025-11-25 01:21:09,299 [wrapper] Pilot exit status: 0
[2025-11-24 20:21:09] 2025-11-25 01:21:09,367 [wrapper] pandaids: 6894257116 6894257116 6894257116
[2025-11-24 20:21:09] 2025-11-25 01:21:09,438 [wrapper] cleanup supervisor_pilot 3351272 3403748
[2025-11-24 20:21:09] 2025-11-25 01:21:09,445 [wrapper] Test setup, not cleaning
[2025-11-24 20:21:09] 2025-11-25 01:21:09,449 [wrapper] apfmon messages muted
[2025-11-24 20:21:09] 2025-11-25 01:21:09,454 [wrapper] ==== wrapper stdout END ====
[2025-11-24 20:21:09] 2025-11-25 01:21:09,458 [wrapper] ==== wrapper stderr END ====
[2025-11-24 20:21:09]  *** Error codes and diagnostics ***
[2025-11-24 20:21:09]     "exeErrorCode": 0,
[2025-11-24 20:21:09]     "exeErrorDiag": "",
[2025-11-24 20:21:09]     "pilotErrorCode": 0,
[2025-11-24 20:21:09]     "pilotErrorDiag": "",
[2025-11-24 20:21:09]  *** Listing of results directory ***
[2025-11-24 20:21:09] total 1747476
[2025-11-24 20:21:09] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 22:09 queuedata.json
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 22:09 pilot3.tar.gz
[2025-11-24 20:21:09] -rwx------. 1 boincer umatlas     36292 Nov 20 22:10 runpilot2-wrapper.sh
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas       100 Nov 22 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 20:21:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 07:12 run_atlas
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas       105 Nov 22 07:12 job.xml
[2025-11-24 20:21:09] -rw-r--r--. 3 boincer umatlas 410096579 Nov 22 07:12 EVNT.47493127._002150.pool.root.1
[2025-11-24 20:21:09] -rw-r--r--. 3 boincer umatlas 410096579 Nov 22 07:12 ATLAS.root_0
[2025-11-24 20:21:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 07:12 start_atlas.sh
[2025-11-24 20:21:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 07:12 shared
[2025-11-24 20:21:09] -rw-r--r--. 2 boincer umatlas    590110 Nov 22 07:12 input.tar.gz
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas         0 Nov 22 07:12 boinc_lockfile
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 22:01 pandaJob.out
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas        57 Nov 22 22:01 setup.sh.local
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas    989784 Nov 22 22:01 agis_schedconf.cvmfs.json
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas       534 Nov 24 20:10 boinc_task_state.xml
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas 916380146 Nov 24 20:19 HITS.47533967._001215.pool.root.1
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas      1072 Nov 24 20:19 memory_monitor_summary.json
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas   1516227 Nov 24 20:20 agis_ddmendpoints.agis.ALL.json
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas   3378212 Nov 24 20:20 log.47533967._001215.job.log.tgz.1
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas      8654 Nov 24 20:20 heartbeat.json
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas      6844 Nov 24 20:20 init_data.xml
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas        96 Nov 24 20:20 pilot_heartbeat.json
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas        30 Nov 24 20:21 wrapper_checkpoint.txt
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 20:21 boinc_mmap_file
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas      4824 Nov 24 20:21 pilotlog.txt
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas  21078492 Nov 24 20:21 log.47533967._001215.job.log.1
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas       353 Nov 24 20:21 output.list
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas       620 Nov 24 20:21 runtime_log
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas  24473600 Nov 24 20:21 result.tar.gz
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas      9439 Nov 24 20:21 runtime_log.err
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas       919 Nov 24 20:21 nLJODmriWg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyvIKDmPsBv3n.diag
[2025-11-24 20:21:09] -rw-r--r--. 1 boincer umatlas     25665 Nov 24 20:21 stderr.txt
[2025-11-24 20:21:09] HITS file was successfully produced:
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas 916380146 Nov 24 20:19 shared/HITS.pool.root.1
[2025-11-24 20:21:09]  *** Contents of shared directory: ***
[2025-11-24 20:21:09] total 1319896
[2025-11-24 20:21:09] -rw-r--r--. 3 boincer umatlas 410096579 Nov 22 07:12 ATLAS.root_0
[2025-11-24 20:21:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 07:12 start_atlas.sh
[2025-11-24 20:21:09] -rw-r--r--. 2 boincer umatlas    590110 Nov 22 07:12 input.tar.gz
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas 916380146 Nov 24 20:19 HITS.pool.root.1
[2025-11-24 20:21:09] -rw-------. 1 boincer umatlas  24473600 Nov 24 20:21 result.tar.gz
20:21:11 (3392083): run_atlas exited; CPU time 271827.945127
20:21:11 (3392083): called boinc_finish(0)

</stderr_txt>
]]>

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