Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:47:20 (3551214): wrapper (7.7.26015): starting
11:47:20 (3551214): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 11:47:20] Arguments: --nthreads 8
[2025-11-21 11:47:20] Threads: 8
[2025-11-21 11:47:20] Checking for CVMFS
[2025-11-21 11:47:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 11:47:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 11:47:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 11:47:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 11:47:21] 2.13.2.0 12166 28901 274124 153135 1 104 37714222 40960000 12468 16776704 0 46145364 99.706 28840014 31990 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 11:47:21] CVMFS is ok
[2025-11-21 11:47:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 11:47:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 11:47:21] Further information can be found at the LHC@home message board.
[2025-11-21 11:47:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 11:47:21] Checking for apptainer binary...
[2025-11-21 11:47:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 11:47:21] Running /usr/bin/apptainer --version
[2025-11-21 11:47:21] apptainer version 1.4.4-1.el9
[2025-11-21 11:47:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 11:47:21] c-211-33-1.aglt2.org
[2025-11-21 11:47:21] apptainer works
[2025-11-21 11:47:21] Set ATHENA_PROC_NUMBER=8
[2025-11-21 11:47:21] Set ATHENA_CORE_NUMBER=8
[2025-11-21 11:47:21] Starting ATLAS job with PandaID=6893833024
[2025-11-21 11:47:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 10:19:16]  *** The last 200 lines of the pilot log: ***
[2025-11-22 10:19:16] 2025-11-22 15:18:20,909 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 10:19:16] 2025-11-22 15:18:20,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 10:19:16] 2025-11-22 15:18:20,949 | INFO     | fitting pss+swap vs Time
[2025-11-22 10:19:16] 2025-11-22 15:18:20,953 | INFO     | sum of square deviations: 726196463726.663
[2025-11-22 10:19:16] 2025-11-22 15:18:21,044 | INFO     | sum of deviations: 1714028849299.5059
[2025-11-22 10:19:16] 2025-11-22 15:18:21,044 | INFO     | mean x: 1763784179.6536145
[2025-11-22 10:19:16] 2025-11-22 15:18:21,045 | INFO     | mean y: 2889822.7793674697
[2025-11-22 10:19:16] 2025-11-22 15:18:21,045 | INFO     | intersect: -4160139218.081217
[2025-11-22 10:19:16] 2025-11-22 15:18:21,046 | INFO     | chi2: 11.641929771640468
[2025-11-22 10:19:16] 2025-11-22 15:18:21,052 | INFO     | sum of square deviations: 718025718026.7485
[2025-11-22 10:19:16] 2025-11-22 15:18:21,147 | INFO     | sum of deviations: 2151241657724.0623
[2025-11-22 10:19:16] 2025-11-22 15:18:21,147 | INFO     | mean x: 1763784027.1655328
[2025-11-22 10:19:16] 2025-11-22 15:18:21,147 | INFO     | mean y: 2897980.707482993
[2025-11-22 10:19:16] 2025-11-22 15:18:21,147 | INFO     | intersect: -5281488886.234035
[2025-11-22 10:19:16] 2025-11-22 15:18:21,153 | INFO     | chi2: 8.595911409126622
[2025-11-22 10:19:16] 2025-11-22 15:18:21,153 | INFO     | current chi2=8.595911409126622 (change=26.164204923602036 %)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,155 | INFO     | sum of square deviations: 709916508363.9552
[2025-11-22 10:19:16] 2025-11-22 15:18:21,225 | INFO     | sum of deviations: 2597603529099.457
[2025-11-22 10:19:16] 2025-11-22 15:18:21,226 | INFO     | mean x: 1763783874.6775417
[2025-11-22 10:19:16] 2025-11-22 15:18:21,226 | INFO     | mean y: 2906375.17754173
[2025-11-22 10:19:16] 2025-11-22 15:18:21,226 | INFO     | intersect: -6450826089.770615
[2025-11-22 10:19:16] 2025-11-22 15:18:21,232 | INFO     | chi2: 5.46887170089631
[2025-11-22 10:19:16] 2025-11-22 15:18:21,232 | INFO     | current chi2=5.46887170089631 (change=36.378221684674514 %)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,234 | INFO     | sum of square deviations: 701868522027.1567
[2025-11-22 10:19:16] 2025-11-22 15:18:21,303 | INFO     | sum of deviations: 2932022150016.0347
[2025-11-22 10:19:16] 2025-11-22 15:18:21,304 | INFO     | mean x: 1763783722.1888804
[2025-11-22 10:19:16] 2025-11-22 15:18:21,304 | INFO     | mean y: 2912707.221629855
[2025-11-22 10:19:16] 2025-11-22 15:18:21,304 | INFO     | intersect: -7365209354.100036
[2025-11-22 10:19:16] 2025-11-22 15:18:21,306 | INFO     | chi2: 3.4589384408143267
[2025-11-22 10:19:16] 2025-11-22 15:18:21,306 | INFO     | current chi2=3.4589384408143267 (change=36.75224744717579 %)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,312 | INFO     | sum of square deviations: 693881446061.3176
[2025-11-22 10:19:16] 2025-11-22 15:18:21,377 | INFO     | sum of deviations: 3123135247839.9023
[2025-11-22 10:19:16] 2025-11-22 15:18:21,378 | INFO     | mean x: 1763783569.6987767
[2025-11-22 10:19:16] 2025-11-22 15:18:21,379 | INFO     | mean y: 2916355.0657492355
[2025-11-22 10:19:16] 2025-11-22 15:18:21,379 | INFO     | intersect: -7935809586.311206
[2025-11-22 10:19:16] 2025-11-22 15:18:21,380 | INFO     | chi2: 2.7869002315854976
[2025-11-22 10:19:16] 2025-11-22 15:18:21,381 | INFO     | current chi2=2.7869002315854976 (change=19.429030632606846 %)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,381 | INFO     | right removable region: 1307
[2025-11-22 10:19:16] 2025-11-22 15:18:21,386 | INFO     | sum of square deviations: 718023163346.7483
[2025-11-22 10:19:16] 2025-11-22 15:18:21,420 | INFO     | sum of deviations: 1336314713587.937
[2025-11-22 10:19:16] 2025-11-22 15:18:21,421 | INFO     | mean x: 1763784332.1655328
[2025-11-22 10:19:16] 2025-11-22 15:18:21,421 | INFO     | mean y: 2896864.6258503404
[2025-11-22 10:19:16] 2025-11-22 15:18:21,421 | INFO     | intersect: -3279686588.0899286
[2025-11-22 10:19:16] 2025-11-22 15:18:21,422 | INFO     | chi2: 9.294304468192307
[2025-11-22 10:19:16] 2025-11-22 15:18:21,423 | INFO     | current chi2=9.294304468192307 (change=20.165259106500837 %)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,423 | INFO     | left removable region: 10
[2025-11-22 10:19:16] 2025-11-22 15:18:21,424 | INFO     | sum of square deviations: 676519442797.4917
[2025-11-22 10:19:16] 2025-11-22 15:18:21,457 | INFO     | sum of deviations: 2661387985048.5776
[2025-11-22 10:19:16] 2025-11-22 15:18:21,458 | INFO     | mean x: 1763783844.2212799
[2025-11-22 10:19:16] 2025-11-22 15:18:21,458 | INFO     | mean y: 2926129.2906707786
[2025-11-22 10:19:16] 2025-11-22 15:18:21,458 | INFO     | intersect: -6935696524.069546
[2025-11-22 10:19:16] 2025-11-22 15:18:21,459 | INFO     | chi2: 0.2375748271032844
[2025-11-22 10:19:16] 2025-11-22 15:18:21,460 | INFO     | current memory leak: 3.93 B/s (using 1297 data points, chi2=0.24)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,461 | INFO     | could have reported an average CPU frequency of 2599 MHz (48 samples)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,461 | INFO     | ..............................
[2025-11-22 10:19:16] 2025-11-22 15:18:21,461 | INFO     | . Timing measurements:
[2025-11-22 10:19:16] 2025-11-22 15:18:21,462 | INFO     | . get job = 0 s
[2025-11-22 10:19:16] 2025-11-22 15:18:21,462 | INFO     | . initial setup = 2 s
[2025-11-22 10:19:16] 2025-11-22 15:18:21,462 | INFO     | . payload setup = 12 s
[2025-11-22 10:19:16] 2025-11-22 15:18:21,462 | INFO     | . stage-in = 0 s
[2025-11-22 10:19:16] 2025-11-22 15:18:21,462 | INFO     | . payload execution = 80966 s
[2025-11-22 10:19:16] 2025-11-22 15:18:21,462 | INFO     | . stage-out = 6 s
[2025-11-22 10:19:16] 2025-11-22 15:18:21,462 | INFO     | . log creation = 1 s
[2025-11-22 10:19:16] 2025-11-22 15:18:21,462 | INFO     | ..............................
[2025-11-22 10:19:16] 2025-11-22 15:18:21,634 | INFO     | 
[2025-11-22 10:19:16] 2025-11-22 15:18:21,634 | INFO     | job summary report
[2025-11-22 10:19:16] 2025-11-22 15:18:21,634 | INFO     | --------------------------------------------------
[2025-11-22 10:19:16] 2025-11-22 15:18:21,634 | INFO     | PanDA job id: 6893833024
[2025-11-22 10:19:16] 2025-11-22 15:18:21,634 | INFO     | task id: 47523449
[2025-11-22 10:19:16] 2025-11-22 15:18:21,634 | INFO     | errors: (none)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | pilot state: finished 
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | transexitcode: 0
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | exeerrorcode: 0
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | exeerrordiag: 
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | exitcode: 0
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | exitmsg: OK
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | cpuconsumptiontime: 276365 s
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | nevents: 1000
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | neventsw: 0
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | pid: 3578651
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | pgrp: 3578651
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | corecount: 8
[2025-11-22 10:19:16] 2025-11-22 15:18:21,635 | INFO     | event service: False
[2025-11-22 10:19:16] 2025-11-22 15:18:21,636 | INFO     | sizes: {0: 2298804, 10: 2299066, 11: 2299094, 80983: 2361449, 80991: 2370445, 80992: 2370501, 81020: 2370875}
[2025-11-22 10:19:16] 2025-11-22 15:18:21,636 | INFO     | --------------------------------------------------
[2025-11-22 10:19:16] 2025-11-22 15:18:21,636 | INFO     | 
[2025-11-22 10:19:16] 2025-11-22 15:18:21,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-11-22 10:19:16] 2025-11-22 15:18:21,677 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 10:19:16] 2025-11-22 15:18:21,680 | INFO     | job 6893833024 has completed (purged errors)
[2025-11-22 10:19:16] 2025-11-22 15:18:21,685 | INFO     | overall cleanup function is called
[2025-11-22 10:19:16] 2025-11-22 15:18:22,710 | INFO     | --- collectZombieJob: --- 10, [3578651]
[2025-11-22 10:19:16] 2025-11-22 15:18:22,710 | INFO     | zombie collector waiting for pid 3578651
[2025-11-22 10:19:16] 2025-11-22 15:18:22,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 10:19:16] 2025-11-22 15:18:22,710 | INFO     | collected zombie processes
[2025-11-22 10:19:16] 2025-11-22 15:18:22,710 | INFO     | will attempt to kill all subprocesses of pid=3578651
[2025-11-22 10:19:16] 2025-11-22 15:18:24,205 | INFO     | process IDs to be killed: [3578651] (in reverse order)
[2025-11-22 10:19:16] 2025-11-22 15:18:24,459 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 10:19:16] 2025-11-22 15:18:24,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 10:19:16] 2025-11-22 15:18:24,492 | INFO     | did not find any defunct processes belonging to 3578651
[2025-11-22 10:19:16] 2025-11-22 15:18:24,529 | INFO     | did not find any defunct processes belonging to 3578651
[2025-11-22 10:19:16] 2025-11-22 15:18:24,534 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 10:19:16] 2025-11-22 15:18:24,535 | INFO     | ready for new job
[2025-11-22 10:19:16] 2025-11-22 15:18:24,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 10:19:16] 2025-11-22 15:18:24,548 | INFO     | ***************************************
[2025-11-22 10:19:16] 2025-11-22 15:18:24,548 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 10:19:16] 2025-11-22 15:18:24,548 | INFO     | ***************************************
[2025-11-22 10:19:16] 2025-11-22 15:18:24,548 | INFO     | 
[2025-11-22 10:19:16] 2025-11-22 15:18:24,558 | INFO     | architecture information:
[2025-11-22 10:19:16] 2025-11-22 15:18:24,576 | INFO     | executing command: cat /etc/os-release
[2025-11-22 10:19:16] 2025-11-22 15:18:24,640 | INFO     | cat /etc/os-release:
[2025-11-22 10:19:16] NAME="CentOS Linux"
[2025-11-22 10:19:16] VERSION="7 (Core)"
[2025-11-22 10:19:16] ID="centos"
[2025-11-22 10:19:16] ID_LIKE="rhel fedora"
[2025-11-22 10:19:16] VERSION_ID="7"
[2025-11-22 10:19:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 10:19:16] ANSI_COLOR="0;31"
[2025-11-22 10:19:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 10:19:16] HOME_URL="https://www.centos.org/"
[2025-11-22 10:19:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 10:19:16] 
[2025-11-22 10:19:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 10:19:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 10:19:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 10:19:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 10:19:16] 
[2025-11-22 10:19:16] 2025-11-22 15:18:24,640 | INFO     | ***************************************
[2025-11-22 10:19:16] 2025-11-22 15:18:25,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-11-22 10:19:16] 2025-11-22 15:18:25,288 | INFO     | sufficient remaining disk space (121999720448 B)
[2025-11-22 10:19:16] 2025-11-22 15:18:25,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 10:19:16] 2025-11-22 15:18:25,289 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 10:19:16] 2025-11-22 15:18:25,289 | INFO     | update_server=False
[2025-11-22 10:19:16] 2025-11-22 15:18:25,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 10:19:16] 2025-11-22 15:18:25,471 | INFO     | all data control threads have been joined
[2025-11-22 10:19:16] 2025-11-22 15:18:25,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:19:16] 2025-11-22 15:18:25,824 | INFO     | aborting loop
[2025-11-22 10:19:16] 2025-11-22 15:18:26,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 10:19:16] 2025-11-22 15:18:26,189 | INFO     | all payload control threads have been joined
[2025-11-22 10:19:16] 2025-11-22 15:18:26,268 | INFO     | all job control threads have been joined
[2025-11-22 10:19:16] 2025-11-22 15:18:26,297 | INFO     | [job] retrieve thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:26,477 | INFO     | [data] control thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:26,551 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:26,551 | INFO     | [data] copytool_in thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:26,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:19:16] 2025-11-22 15:18:26,713 | INFO     | [job] validate thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:26,786 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:26,817 | INFO     | [payload] validate_post thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:26,830 | INFO     | [job] job monitor thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:27,196 | INFO     | [payload] control thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:27,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 10:19:16] 2025-11-22 15:18:27,276 | INFO     | [job] control thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:27,548 | INFO     | [payload] failed_post thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:27,600 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:27,600 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:27,665 | INFO     | [job] queue monitor thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:28,102 | INFO     | [data] copytool_out thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:31,228 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 10:19:16] 2025-11-22 15:18:54,613 | INFO     | PID=3560847 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 10:19:16] 2025-11-22 15:18:54,613 | INFO     | .. there are 17 such processes running
[2025-11-22 10:19:16] 2025-11-22 15:18:54,613 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 10:19:16] 2025-11-22 15:18:54,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 10:19:16] 2025-11-22 15:18:54,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 10:19:16] 2025-11-22 15:19:09,521 | INFO     | [monitor] cgroup control has ended
[2025-11-22 10:19:16] 2025-11-22 15:19:09,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060403353408)>', '<ExcThread(monitor, started 140059646863104)>']
[2025-11-22 10:19:16] 2025-11-22 15:19:10,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 10:19:16] 2025-11-22 15:19:10,729 | INFO     | [monitor] control thread has ended
[2025-11-22 10:19:16] 2025-11-22 15:19:14,833 | INFO     | all workflow threads have been joined
[2025-11-22 10:19:16] 2025-11-22 15:19:14,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 10:19:16] 2025-11-22 15:19:14,833 | INFO     | traces error code: 0
[2025-11-22 10:19:16] 2025-11-22 15:19:14,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 10:19:16] 2025-11-22 15:19:15,295 [wrapper] ==== pilot stdout END ====
[2025-11-22 10:19:16] 2025-11-22 15:19:15,311 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 10:19:16] 2025-11-22 15:19:15,326 [wrapper] pilotpid: 3560847
[2025-11-22 10:19:16] 2025-11-22 15:19:15,343 [wrapper] Pilot exit status: 0
[2025-11-22 10:19:16] 2025-11-22 15:19:15,425 [wrapper] pandaids: 6893833024
[2025-11-22 10:19:16] 2025-11-22 15:19:15,635 [wrapper] cleanup supervisor_pilot 2207382 3560848
[2025-11-22 10:19:16] 2025-11-22 15:19:15,673 [wrapper] Test setup, not cleaning
[2025-11-22 10:19:16] 2025-11-22 15:19:15,703 [wrapper] apfmon messages muted
[2025-11-22 10:19:16] 2025-11-22 15:19:15,731 [wrapper] ==== wrapper stdout END ====
[2025-11-22 10:19:16] 2025-11-22 15:19:15,747 [wrapper] ==== wrapper stderr END ====
[2025-11-22 10:19:16]  *** Error codes and diagnostics ***
[2025-11-22 10:19:16]     "exeErrorCode": 0,
[2025-11-22 10:19:16]     "exeErrorDiag": "",
[2025-11-22 10:19:16]     "pilotErrorCode": 0,
[2025-11-22 10:19:16]     "pilotErrorDiag": "",
[2025-11-22 10:19:16]  *** Listing of results directory ***
[2025-11-22 10:19:16] total 1334460
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:11 queuedata.json
[2025-11-22 10:19:16] -rwx------. 1 boincer umatlas     36292 Nov 20 05:11 runpilot2-wrapper.sh
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas       100 Nov 21 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 10:19:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 11:47 run_atlas
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas       105 Nov 21 11:47 job.xml
[2025-11-22 10:19:16] -rw-r--r--. 2 boincer umatlas 409584985 Nov 21 11:47 EVNT.47493127._000028.pool.root.1
[2025-11-22 10:19:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 11:47 start_atlas.sh
[2025-11-22 10:19:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 11:47 shared
[2025-11-22 10:19:16] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 11:47 input.tar.gz
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas         0 Nov 21 11:47 boinc_lockfile
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas      2784 Nov 21 11:47 pandaJob.out
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas        57 Nov 21 11:47 setup.sh.local
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas    989798 Nov 21 11:47 agis_schedconf.cvmfs.json
[2025-11-22 10:19:16] drwx------. 5 boincer umatlas      4096 Nov 21 11:47 pilot3
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas       533 Nov 22 09:52 boinc_task_state.xml
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas      6882 Nov 22 10:11 init_data.xml
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas 928147091 Nov 22 10:16 HITS.47523449._000273.pool.root.1
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas      1060 Nov 22 10:17 memory_monitor_summary.json
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas   1526164 Nov 22 10:17 agis_ddmendpoints.agis.ALL.json
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas   2361362 Nov 22 10:17 log.47523449._000273.job.log.tgz.1
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas        95 Nov 22 10:18 pilot_heartbeat.json
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas      8621 Nov 22 10:18 heartbeat.json
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 10:19 boinc_mmap_file
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas        29 Nov 22 10:19 wrapper_checkpoint.txt
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas      4826 Nov 22 10:19 pilotlog.txt
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas  10051763 Nov 22 10:19 log.47523449._000273.job.log.1
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas       353 Nov 22 10:19 output.list
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas       620 Nov 22 10:19 runtime_log
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas  12431360 Nov 22 10:19 result.tar.gz
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas      9371 Nov 22 10:19 runtime_log.err
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas       662 Nov 22 10:19 f7SMDmeoGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma9GKDmW45xnn.diag
[2025-11-22 10:19:16] -rw-r--r--. 1 boincer umatlas     21126 Nov 22 10:19 stderr.txt
[2025-11-22 10:19:16] HITS file was successfully produced:
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas 928147091 Nov 22 10:16 shared/HITS.pool.root.1
[2025-11-22 10:19:16]  *** Contents of shared directory: ***
[2025-11-22 10:19:16] total 1319128
[2025-11-22 10:19:16] -rw-r--r--. 2 boincer umatlas 409584985 Nov 21 11:47 ATLAS.root_0
[2025-11-22 10:19:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 11:47 start_atlas.sh
[2025-11-22 10:19:16] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 11:47 input.tar.gz
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas 928147091 Nov 22 10:16 HITS.pool.root.1
[2025-11-22 10:19:16] -rw-------. 1 boincer umatlas  12431360 Nov 22 10:19 result.tar.gz
10:19:17 (3551214): run_atlas exited; CPU time 278671.293041
10:19:17 (3551214): called boinc_finish(0)

</stderr_txt>
]]>

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