Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:55:22 (923737): wrapper (7.7.26015): starting
14:55:22 (923737): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 14:55:22] Arguments: --nthreads 4
[2025-11-24 14:55:22] Threads: 4
[2025-11-24 14:55:22] Checking for CVMFS
[2025-11-24 14:55:22] No cvmfs_config command found, will try listing directly
[2025-11-24 14:55:22] CVMFS is ok
[2025-11-24 14:55:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 14:55:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 14:55:22] Further information can be found at the LHC@home message board.
[2025-11-24 14:55:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 14:55:22] Checking for apptainer binary...
[2025-11-24 14:55:22] which: no apptainer in ((null))
[2025-11-24 14:55:22] apptainer is not installed, using version from CVMFS
[2025-11-24 14:55:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 14:55:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2025-11-24 14:55:22] apptainer works
[2025-11-24 14:55:22] Set ATHENA_PROC_NUMBER=4
[2025-11-24 14:55:22] Set ATHENA_CORE_NUMBER=4
[2025-11-24 14:55:22] Starting ATLAS job with PandaID=6893883471
[2025-11-24 14:55:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:29:46]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:29:46] 2025-11-25 11:24:03,964 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6893883471/HITS.47523449._009077.pool.root.1 since it does not exist
[2025-11-25 12:29:46] 2025-11-25 11:24:03,967 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6893883471/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 12:29:46] 2025-11-25 11:24:03,968 | INFO     | extracted standard info from prmon json
[2025-11-25 12:29:46] 2025-11-25 11:24:03,968 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 12:29:46] 2025-11-25 11:24:03,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 12:29:46] 2025-11-25 11:24:03,992 | INFO     | fitting pss+swap vs Time
[2025-11-25 12:29:46] 2025-11-25 11:24:03,995 | INFO     | sum of square deviations: 630678527375.9875
[2025-11-25 12:29:46] 2025-11-25 11:24:04,064 | INFO     | sum of deviations: 1913989596646.002
[2025-11-25 12:29:46] 2025-11-25 11:24:04,064 | INFO     | mean x: 1764031170.0031571
[2025-11-25 12:29:46] 2025-11-25 11:24:04,064 | INFO     | mean y: 2320291.2501973165
[2025-11-25 12:29:46] 2025-11-25 11:24:04,064 | INFO     | intersect: -5351179409.449884
[2025-11-25 12:29:46] 2025-11-25 11:24:04,066 | INFO     | chi2: 3.4918752383898872
[2025-11-25 12:29:46] 2025-11-25 11:24:04,068 | INFO     | sum of square deviations: 623241356593.4874
[2025-11-25 12:29:46] 2025-11-25 11:24:04,108 | INFO     | sum of deviations: 2135577043976.5212
[2025-11-25 12:29:46] 2025-11-25 11:24:04,109 | INFO     | mean x: 1764031017.5031695
[2025-11-25 12:29:46] 2025-11-25 11:24:04,109 | INFO     | mean y: 2324831.495245642
[2025-11-25 12:29:46] 2025-11-25 11:24:04,109 | INFO     | intersect: -6042242182.531563
[2025-11-25 12:29:46] 2025-11-25 11:24:04,111 | INFO     | chi2: 1.812216536596605
[2025-11-25 12:29:46] 2025-11-25 11:24:04,111 | INFO     | current chi2=1.812216536596605 (change=48.10191049574203 %)
[2025-11-25 12:29:46] 2025-11-25 11:24:04,113 | INFO     | sum of square deviations: 615862884585.9873
[2025-11-25 12:29:46] 2025-11-25 11:24:04,155 | INFO     | sum of deviations: 2120023162568.9749
[2025-11-25 12:29:46] 2025-11-25 11:24:04,155 | INFO     | mean x: 1764030865.0031822
[2025-11-25 12:29:46] 2025-11-25 11:24:04,156 | INFO     | mean y: 2324510.0063643595
[2025-11-25 12:29:46] 2025-11-25 11:24:04,156 | INFO     | intersect: -6070108797.624107
[2025-11-25 12:29:46] 2025-11-25 11:24:04,158 | INFO     | chi2: 1.8105023625960672
[2025-11-25 12:29:46] 2025-11-25 11:24:04,158 | INFO     | current chi2=1.8105023625960672 (change=0.09458991052785654 %)
[2025-11-25 12:29:46] 2025-11-25 11:24:04,158 | INFO     | right removable region: 1256
[2025-11-25 12:29:46] 2025-11-25 11:24:04,160 | INFO     | sum of square deviations: 623241354153.4874
[2025-11-25 12:29:46] 2025-11-25 11:24:04,203 | INFO     | sum of deviations: 1687036264645.1562
[2025-11-25 12:29:46] 2025-11-25 11:24:04,203 | INFO     | mean x: 1764031322.5031695
[2025-11-25 12:29:46] 2025-11-25 11:24:04,203 | INFO     | mean y: 2324938.5855784467
[2025-11-25 12:29:46] 2025-11-25 11:24:04,204 | INFO     | intersect: -4772686849.704544
[2025-11-25 12:29:46] 2025-11-25 11:24:04,206 | INFO     | chi2: 1.7872346890103405
[2025-11-25 12:29:46] 2025-11-25 11:24:04,206 | INFO     | current chi2=1.7872346890103405 (change=48.8173383355346 %)
[2025-11-25 12:29:46] 2025-11-25 11:24:04,208 | INFO     | sum of square deviations: 615862879705.9873
[2025-11-25 12:29:46] 2025-11-25 11:24:04,252 | INFO     | sum of deviations: 1663926630109.2676
[2025-11-25 12:29:46] 2025-11-25 11:24:04,252 | INFO     | mean x: 1764031475.0031822
[2025-11-25 12:29:46] 2025-11-25 11:24:04,252 | INFO     | mean y: 2325415.9331742246
[2025-11-25 12:29:46] 2025-11-25 11:24:04,253 | INFO     | intersect: -4763701315.552896
[2025-11-25 12:29:46] 2025-11-25 11:24:04,254 | INFO     | chi2: 1.786075591480106
[2025-11-25 12:29:46] 2025-11-25 11:24:04,255 | INFO     | current chi2=1.786075591480106 (change=0.06485424311433331 %)
[2025-11-25 12:29:46] 2025-11-25 11:24:04,255 | INFO     | left removable region: 20
[2025-11-25 12:29:46] 2025-11-25 11:24:04,257 | INFO     | sum of square deviations: 585509034546.9869
[2025-11-25 12:29:46] 2025-11-25 11:24:04,300 | INFO     | sum of deviations: 1837409837132.059
[2025-11-25 12:29:46] 2025-11-25 11:24:04,300 | INFO     | mean x: 1764031444.5032363
[2025-11-25 12:29:46] 2025-11-25 11:24:04,301 | INFO     | mean y: 2330274.985436893
[2025-11-25 12:29:46] 2025-11-25 11:24:04,301 | INFO     | intersect: -5533448915.250804
[2025-11-25 12:29:46] 2025-11-25 11:24:04,303 | INFO     | chi2: 0.08359485303894326
[2025-11-25 12:29:46] 2025-11-25 11:24:04,303 | INFO     | current memory leak: 3.14 B/s (using 1236 data points, chi2=0.08)
[2025-11-25 12:29:46] 2025-11-25 11:24:04,304 | INFO     | could have reported an average CPU frequency of 2587 MHz (46 samples)
[2025-11-25 12:29:46] 2025-11-25 11:24:04,305 | INFO     | ..............................
[2025-11-25 12:29:46] 2025-11-25 11:24:04,305 | INFO     | . Timing measurements:
[2025-11-25 12:29:46] 2025-11-25 11:24:04,305 | INFO     | . get job = 0 s
[2025-11-25 12:29:46] 2025-11-25 11:24:04,305 | INFO     | . initial setup = 1 s
[2025-11-25 12:29:46] 2025-11-25 11:24:04,305 | INFO     | . payload setup = 5 s
[2025-11-25 12:29:46] 2025-11-25 11:24:04,306 | INFO     | . stage-in = 0 s
[2025-11-25 12:29:46] 2025-11-25 11:24:04,306 | INFO     | . payload execution = 77278 s
[2025-11-25 12:29:46] 2025-11-25 11:24:04,306 | INFO     | . stage-out = 2 s
[2025-11-25 12:29:46] 2025-11-25 11:24:04,306 | INFO     | . log creation = 0 s
[2025-11-25 12:29:46] 2025-11-25 11:24:04,306 | INFO     | ..............................
[2025-11-25 12:29:46] 2025-11-25 11:24:04,425 | INFO     | 
[2025-11-25 12:29:46] 2025-11-25 11:24:04,425 | INFO     | job summary report
[2025-11-25 12:29:46] 2025-11-25 11:24:04,425 | INFO     | --------------------------------------------------
[2025-11-25 12:29:46] 2025-11-25 11:24:04,425 | INFO     | PanDA job id: 6893883471
[2025-11-25 12:29:46] 2025-11-25 11:24:04,425 | INFO     | task id: 47523449
[2025-11-25 12:29:46] 2025-11-25 11:24:04,426 | INFO     | errors: (none)
[2025-11-25 12:29:46] 2025-11-25 11:24:04,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 12:29:46] 2025-11-25 11:24:04,426 | INFO     | pilot state: finished 
[2025-11-25 12:29:46] 2025-11-25 11:24:04,426 | INFO     | transexitcode: 0
[2025-11-25 12:29:46] 2025-11-25 11:24:04,426 | INFO     | exeerrorcode: 0
[2025-11-25 12:29:46] 2025-11-25 11:24:04,426 | INFO     | exeerrordiag: 
[2025-11-25 12:29:46] 2025-11-25 11:24:04,426 | INFO     | exitcode: 0
[2025-11-25 12:29:46] 2025-11-25 11:24:04,426 | INFO     | exitmsg: OK
[2025-11-25 12:29:46] 2025-11-25 11:24:04,427 | INFO     | cpuconsumptiontime: 305571 s
[2025-11-25 12:29:46] 2025-11-25 11:24:04,427 | INFO     | nevents: 1000
[2025-11-25 12:29:46] 2025-11-25 11:24:04,427 | INFO     | neventsw: 0
[2025-11-25 12:29:46] 2025-11-25 11:24:04,427 | INFO     | pid: 934607
[2025-11-25 12:29:46] 2025-11-25 11:24:04,427 | INFO     | pgrp: 934607
[2025-11-25 12:29:46] 2025-11-25 11:24:04,427 | INFO     | corecount: 4
[2025-11-25 12:29:46] 2025-11-25 11:24:04,427 | INFO     | event service: False
[2025-11-25 12:29:46] 2025-11-25 11:24:04,427 | INFO     | sizes: {0: 2284150, 1: 2284349, 5: 2284611, 12: 2284667, 77288: 2344844, 77290: 2353865, 77292: 2354049, 77297: 2354323}
[2025-11-25 12:29:46] 2025-11-25 11:24:04,428 | INFO     | --------------------------------------------------
[2025-11-25 12:29:46] 2025-11-25 11:24:04,428 | INFO     | 
[2025-11-25 12:29:46] 2025-11-25 11:24:04,428 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-11-25 12:29:46] 2025-11-25 11:24:04,450 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,450 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 12:29:46] 2025-11-25 11:24:04,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 12:29:46] 2025-11-25 11:24:04,452 | INFO     | job 6893883471 has completed (purged errors)
[2025-11-25 12:29:46] 2025-11-25 11:24:04,453 | INFO     | overall cleanup function is called
[2025-11-25 12:29:46] 2025-11-25 11:24:04,791 | INFO     | number of running child processes to parent process 934607: 1
[2025-11-25 12:29:46] 2025-11-25 11:24:04,791 | INFO     | maximum number of monitored processes: 10
[2025-11-25 12:29:46] 2025-11-25 11:24:04,791 | INFO     | aborting job monitoring since job object (job id=6893883471) has expired
[2025-11-25 12:29:46] 2025-11-25 11:24:05,468 | INFO     | --- collectZombieJob: --- 10, [934607]
[2025-11-25 12:29:46] 2025-11-25 11:24:05,469 | INFO     | zombie collector waiting for pid 934607
[2025-11-25 12:29:46] 2025-11-25 11:24:05,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 12:29:46] 2025-11-25 11:24:05,469 | INFO     | collected zombie processes
[2025-11-25 12:29:46] 2025-11-25 11:24:05,469 | INFO     | will attempt to kill all subprocesses of pid=934607
[2025-11-25 12:29:46] 2025-11-25 11:24:05,816 | INFO     | process IDs to be killed: [934607] (in reverse order)
[2025-11-25 12:29:46] 2025-11-25 11:24:05,904 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 12:29:46] 2025-11-25 11:24:05,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 12:29:46] 2025-11-25 11:24:05,914 | INFO     | did not find any defunct processes belonging to 934607
[2025-11-25 12:29:46] 2025-11-25 11:24:05,923 | INFO     | did not find any defunct processes belonging to 934607
[2025-11-25 12:29:46] 2025-11-25 11:24:05,925 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 12:29:46] 2025-11-25 11:24:05,925 | INFO     | ready for new job
[2025-11-25 12:29:46] 2025-11-25 11:24:05,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 12:29:46] 2025-11-25 11:24:05,932 | INFO     | ***************************************
[2025-11-25 12:29:46] 2025-11-25 11:24:05,932 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 12:29:46] 2025-11-25 11:24:05,933 | INFO     | ***************************************
[2025-11-25 12:29:46] 2025-11-25 11:24:05,933 | INFO     | 
[2025-11-25 12:29:46] 2025-11-25 11:24:05,935 | INFO     | architecture information:
[2025-11-25 12:29:46] 2025-11-25 11:24:05,936 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:29:46] 2025-11-25 11:24:05,950 | INFO     | cat /etc/os-release:
[2025-11-25 12:29:46] NAME="CentOS Linux"
[2025-11-25 12:29:46] VERSION="7 (Core)"
[2025-11-25 12:29:46] ID="centos"
[2025-11-25 12:29:46] ID_LIKE="rhel fedora"
[2025-11-25 12:29:46] VERSION_ID="7"
[2025-11-25 12:29:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:29:46] ANSI_COLOR="0;31"
[2025-11-25 12:29:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:29:46] HOME_URL="https://www.centos.org/"
[2025-11-25 12:29:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:29:46] 
[2025-11-25 12:29:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:29:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:29:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:29:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:29:46] 
[2025-11-25 12:29:46] 2025-11-25 11:24:05,950 | INFO     | ***************************************
[2025-11-25 12:29:46] 2025-11-25 11:24:06,453 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-11-25 12:29:46] 2025-11-25 11:24:06,469 | INFO     | sufficient remaining disk space (1654374006784 B)
[2025-11-25 12:29:46] 2025-11-25 11:24:06,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:29:46] 2025-11-25 11:24:06,469 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:29:46] 2025-11-25 11:24:06,470 | INFO     | update_server=False
[2025-11-25 12:29:46] 2025-11-25 11:24:06,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:29:46] 2025-11-25 11:24:06,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:29:46] 2025-11-25 11:24:06,470 | INFO     | aborting loop
[2025-11-25 12:29:46] 2025-11-25 11:24:06,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:29:46] 2025-11-25 11:24:07,104 | INFO     | all payload control threads have been joined
[2025-11-25 12:29:46] 2025-11-25 11:24:07,165 | INFO     | all job control threads have been joined
[2025-11-25 12:29:46] 2025-11-25 11:24:07,447 | INFO     | all data control threads have been joined
[2025-11-25 12:29:46] 2025-11-25 11:24:07,475 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:07,476 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:07,759 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:07,785 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:08,057 | INFO     | [job] validate thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:08,109 | INFO     | [payload] control thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:08,169 | INFO     | [job] control thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:08,333 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:08,356 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:08,452 | INFO     | [data] control thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:08,475 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:08,694 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:08,698 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:09,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:29:46] 2025-11-25 11:24:09,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:29:46] 2025-11-25 11:24:10,439 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:13,644 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:17,112 | INFO     | job.realtimelogging is not enabled
[2025-11-25 12:29:46] 2025-11-25 11:24:18,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:29:46] 2025-11-25 11:24:36,942 | INFO     | PID=927438 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 12:29:46] 2025-11-25 11:24:36,942 | INFO     | .. there are 2 such processes running
[2025-11-25 12:29:46] 2025-11-25 11:24:36,943 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:29:46] 2025-11-25 11:24:36,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:29:46] 2025-11-25 11:24:36,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:29:46] 2025-11-25 11:24:39,184 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:29:46] 2025-11-25 11:24:40,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22804679571264)>', '<ExcThread(monitor, started 22804445501184)>']
[2025-11-25 12:29:46] 2025-11-25 11:24:40,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:29:46] 2025-11-25 11:24:40,964 | INFO     | [monitor] control thread has ended
[2025-11-25 12:29:46] 2025-11-25 11:24:45,553 | INFO     | all workflow threads have been joined
[2025-11-25 12:29:46] 2025-11-25 11:24:45,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:29:46] 2025-11-25 11:24:45,554 | INFO     | traces error code: 0
[2025-11-25 12:29:46] 2025-11-25 11:24:45,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:29:46] 2025-11-25 11:24:45,699 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:29:46] 2025-11-25 11:24:45,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:29:46] 2025-11-25 11:24:45,704 [wrapper] pilotpid: 927438
[2025-11-25 12:29:46] 2025-11-25 11:24:45,707 [wrapper] Pilot exit status: 0
[2025-11-25 12:29:46] 2025-11-25 11:24:45,716 [wrapper] pandaids: 6893883471
[2025-11-25 12:29:46] 2025-11-25 11:24:45,773 [wrapper] cleanup supervisor_pilot 1757084 927439
[2025-11-25 12:29:46] 2025-11-25 11:24:45,776 [wrapper] Test setup, not cleaning
[2025-11-25 12:29:46] 2025-11-25 11:24:45,779 [wrapper] apfmon messages muted
[2025-11-25 12:29:46] 2025-11-25 11:24:45,781 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:29:46] 2025-11-25 11:24:45,784 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:29:46]  *** Error codes and diagnostics ***
[2025-11-25 12:29:46]     "exeErrorCode": 0,
[2025-11-25 12:29:46]     "exeErrorDiag": "",
[2025-11-25 12:29:46]     "pilotErrorCode": 0,
[2025-11-25 12:29:46]     "pilotErrorDiag": "",
[2025-11-25 12:29:46]  *** Listing of results directory ***
[2025-11-25 12:29:46] total 1330348
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc    576529 Nov 20 22:12 pilot3.tar.gz
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc      5112 Nov 20 22:14 queuedata.json
[2025-11-25 12:29:46] -rwx------ 1 boinc boinc     36292 Nov 20 22:16 runpilot2-wrapper.sh
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc       100 Nov 24 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:29:46] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 14:55 run_atlas
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc       105 Nov 24 14:55 job.xml
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc      6420 Nov 24 14:55 init_data.xml
[2025-11-25 12:29:46] -rw-r--r-- 2 boinc boinc 411696635 Nov 24 14:55 EVNT.47493127._000908.pool.root.1
[2025-11-25 12:29:46] -rw-r--r-- 2 boinc boinc     15847 Nov 24 14:55 start_atlas.sh
[2025-11-25 12:29:46] drwxrwx--x 2 boinc boinc      4096 Nov 24 14:55 shared
[2025-11-25 12:29:46] -rw-r--r-- 2 boinc boinc    590103 Nov 24 14:55 input.tar.gz
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc         0 Nov 24 14:55 boinc_lockfile
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc      2786 Nov 24 14:55 pandaJob.out
[2025-11-25 12:29:46] -rw------- 1 boinc boinc    988280 Nov 24 14:55 agis_schedconf.cvmfs.json
[2025-11-25 12:29:46] drwx------ 5 boinc boinc      4096 Nov 24 14:55 pilot3
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc       532 Nov 25 12:19 boinc_task_state.xml
[2025-11-25 12:29:46] -rw------- 1 boinc boinc 921107665 Nov 25 12:23 HITS.47523449._009077.pool.root.1
[2025-11-25 12:29:46] -rw------- 1 boinc boinc      1061 Nov 25 12:23 memory_monitor_summary.json
[2025-11-25 12:29:46] -rw------- 1 boinc boinc   1516240 Nov 25 12:23 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:29:46] -rw------- 1 boinc boinc   1935188 Nov 25 12:23 log.47523449._009077.job.log.tgz.1
[2025-11-25 12:29:46] -rw------- 1 boinc boinc      8628 Nov 25 12:24 heartbeat.json
[2025-11-25 12:29:46] -rw------- 1 boinc boinc        95 Nov 25 12:24 pilot_heartbeat.json
[2025-11-25 12:29:46] -rw------- 1 boinc boinc      4905 Nov 25 12:24 pilotlog.txt
[2025-11-25 12:29:46] -rw------- 1 boinc boinc  10847199 Nov 25 12:24 log.47523449._009077.job.log.1
[2025-11-25 12:29:46] -rw------- 1 boinc boinc       353 Nov 25 12:24 output.list
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc       620 Nov 25 12:24 runtime_log
[2025-11-25 12:29:46] -rw------- 1 boinc boinc  12800000 Nov 25 12:24 result.tar.gz
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc      9206 Nov 25 12:24 runtime_log.err
[2025-11-25 12:29:46] -rw------- 1 boinc boinc       672 Nov 25 12:24 0ODODmfBRg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbYIKDmAKzxmn.diag
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc        28 Nov 25 12:29 wrapper_checkpoint.txt
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc      8192 Nov 25 12:29 boinc_mmap_file
[2025-11-25 12:29:46] -rw-r--r-- 1 boinc boinc     21170 Nov 25 12:29 stderr.txt
[2025-11-25 12:29:46] HITS file was successfully produced:
[2025-11-25 12:29:46] -rw------- 1 boinc boinc 921107665 Nov 25 12:23 shared/HITS.pool.root.1
[2025-11-25 12:29:46]  *** Contents of shared directory: ***
[2025-11-25 12:29:46] total 1314668
[2025-11-25 12:29:46] -rw-r--r-- 2 boinc boinc 411696635 Nov 24 14:55 ATLAS.root_0
[2025-11-25 12:29:46] -rw-r--r-- 2 boinc boinc     15847 Nov 24 14:55 start_atlas.sh
[2025-11-25 12:29:46] -rw-r--r-- 2 boinc boinc    590103 Nov 24 14:55 input.tar.gz
[2025-11-25 12:29:46] -rw------- 1 boinc boinc 921107665 Nov 25 12:23 HITS.pool.root.1
[2025-11-25 12:29:46] -rw------- 1 boinc boinc  12800000 Nov 25 12:24 result.tar.gz
12:29:48 (923737): run_atlas exited; CPU time 308283.764782
12:29:48 (923737): called boinc_finish(0)

</stderr_txt>
]]>

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