Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:39:51 (326261): wrapper (7.7.26015): starting
11:39:51 (326261): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 11:39:51] Arguments: --nthreads 8
[2025-11-21 11:39:51] Threads: 8
[2025-11-21 11:39:51] Checking for CVMFS
[2025-11-21 11:39:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 11:39:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 11:39:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 11:39:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 11:39:53] 2.13.2.0 6111 27489 220132 153135 0 417 32923911 40960001 8596 16776704 0 22699880 99.737 12767811 34402 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 11:39:53] CVMFS is ok
[2025-11-21 11:39:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 11:39:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 11:39:53] Further information can be found at the LHC@home message board.
[2025-11-21 11:39:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 11:39:53] Checking for apptainer binary...
[2025-11-21 11:39:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 11:39:53] Running /usr/bin/apptainer --version
[2025-11-21 11:39:53] apptainer version 1.4.4-1.el9
[2025-11-21 11:39:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 11:39:54] c-210-35-3.aglt2.org
[2025-11-21 11:39:54] apptainer works
[2025-11-21 11:39:54] Set ATHENA_PROC_NUMBER=8
[2025-11-21 11:39:54] Set ATHENA_CORE_NUMBER=8
[2025-11-21 11:39:54] Starting ATLAS job with PandaID=6894256548
[2025-11-21 11:39:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:45:35 (3166080): wrapper (7.7.26015): starting
19:45:35 (3166080): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 19:45:35] Arguments: --nthreads 9
[2025-11-22 19:45:35] Threads: 9
[2025-11-22 19:45:35] This job has been restarted, cleaning up previous attempt
[2025-11-22 19:45:36] Checking for CVMFS
[2025-11-22 19:45:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:45:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:45:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:45:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:45:38] 2.13.2.0 6111 29414 260500 153191 1 86 39284771 40960000 10357 16776704 0 26292162 99.721 18722938 38998 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 19:45:38] CVMFS is ok
[2025-11-22 19:45:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:45:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:45:38] Further information can be found at the LHC@home message board.
[2025-11-22 19:45:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:45:38] Checking for apptainer binary...
[2025-11-22 19:45:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 19:45:38] Running /usr/bin/apptainer --version
[2025-11-22 19:45:38] apptainer version 1.4.4-1.el9
[2025-11-22 19:45:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:45:39] c-210-35-3.aglt2.org
[2025-11-22 19:45:39] apptainer works
[2025-11-22 19:45:39] Set ATHENA_PROC_NUMBER=9
[2025-11-22 19:45:39] Set ATHENA_CORE_NUMBER=9
[2025-11-22 19:45:39] Starting ATLAS job with PandaID=6894256548
[2025-11-22 19:45:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:01:36 (3392082): wrapper (7.7.26015): starting
22:01:36 (3392082): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:01:36] Arguments: --nthreads 8
[2025-11-22 22:01:36] Threads: 8
[2025-11-22 22:01:36] This job has been restarted, cleaning up previous attempt
[2025-11-22 22:01:37] Checking for CVMFS
[2025-11-22 22:01:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:01:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:01:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:01:38] 2.13.2.0 6111 29550 281020 153193 2 439 40123156 40960000 8996 16776704 0 26616350 99.717 18890866 38808 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 22:01:38] CVMFS is ok
[2025-11-22 22:01:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 22:01:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 22:01:38] Further information can be found at the LHC@home message board.
[2025-11-22 22:01:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:01:38] Checking for apptainer binary...
[2025-11-22 22:01:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:01:38] Running /usr/bin/apptainer --version
[2025-11-22 22:01:38] apptainer version 1.4.4-1.el9
[2025-11-22 22:01:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:01:38] c-210-35-3.aglt2.org
[2025-11-22 22:01:38] apptainer works
[2025-11-22 22:01:39] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:01:39] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:01:39] Starting ATLAS job with PandaID=6894256548
[2025-11-22 22:01:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 08:52:53]  *** The last 200 lines of the pilot log: ***
[2025-11-24 08:52:53] 2025-11-24 13:52:17,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,078 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 08:52:53] 2025-11-24 13:52:19,088 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2736.122035714285
[2025-11-24 08:52:53] 2025-11-24 13:52:19,099 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6894256548/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,100 | INFO     | extracted standard info from prmon json
[2025-11-24 08:52:53] 2025-11-24 13:52:19,100 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 08:52:53] 2025-11-24 13:52:19,100 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 08:52:53] 2025-11-24 13:52:19,133 | INFO     | fitting pss+swap vs Time
[2025-11-24 08:52:53] 2025-11-24 13:52:19,136 | INFO     | sum of square deviations: 2695042534734.656
[2025-11-24 08:52:53] 2025-11-24 13:52:19,190 | INFO     | time since job start (125427s) is within the limit (172800.0s)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,219 | INFO     | sum of deviations: 10478424030090.014
[2025-11-24 08:52:53] 2025-11-24 13:52:19,219 | INFO     | mean x: 1763929628.348249
[2025-11-24 08:52:53] 2025-11-24 13:52:19,220 | INFO     | mean y: 2953420.2388132294
[2025-11-24 08:52:53] 2025-11-24 13:52:19,220 | INFO     | intersect: -6855269545.393092
[2025-11-24 08:52:53] 2025-11-24 13:52:19,242 | INFO     | chi2: 6.533974669519848
[2025-11-24 08:52:53] 2025-11-24 13:52:19,244 | INFO     | sum of square deviations: 2675436275151.038
[2025-11-24 08:52:53] 2025-11-24 13:52:19,332 | INFO     | sum of deviations: 11240066470242.193
[2025-11-24 08:52:53] 2025-11-24 13:52:19,333 | INFO     | mean x: 1763929475.8771331
[2025-11-24 08:52:53] 2025-11-24 13:52:19,333 | INFO     | mean y: 2959343.242808386
[2025-11-24 08:52:53] 2025-11-24 13:52:19,333 | INFO     | intersect: -7407676724.536141
[2025-11-24 08:52:53] 2025-11-24 13:52:19,335 | INFO     | chi2: 2.9589635252511868
[2025-11-24 08:52:53] 2025-11-24 13:52:19,335 | INFO     | current chi2=2.9589635252511868 (change=54.714187383456334 %)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,338 | INFO     | sum of square deviations: 2655923787490.9634
[2025-11-24 08:52:53] 2025-11-24 13:52:19,422 | INFO     | sum of deviations: 11395554527598.924
[2025-11-24 08:52:53] 2025-11-24 13:52:19,423 | INFO     | mean x: 1763929323.3998046
[2025-11-24 08:52:53] 2025-11-24 13:52:19,423 | INFO     | mean y: 2960557.3704789835
[2025-11-24 08:52:53] 2025-11-24 13:52:19,423 | INFO     | intersect: -7565386426.946571
[2025-11-24 08:52:53] 2025-11-24 13:52:19,425 | INFO     | chi2: 2.6337561150642665
[2025-11-24 08:52:53] 2025-11-24 13:52:19,425 | INFO     | current chi2=2.6337561150642665 (change=10.990585298252817 %)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,425 | INFO     | right removable region: 2045
[2025-11-24 08:52:53] 2025-11-24 13:52:19,428 | INFO     | sum of square deviations: 2675421666062.5513
[2025-11-24 08:52:53] 2025-11-24 13:52:19,499 | INFO     | sum of deviations: 9967282909368.184
[2025-11-24 08:52:53] 2025-11-24 13:52:19,500 | INFO     | mean x: 1763929780.876158
[2025-11-24 08:52:53] 2025-11-24 13:52:19,500 | INFO     | mean y: 2957390.7645051195
[2025-11-24 08:52:53] 2025-11-24 13:52:19,500 | INFO     | intersect: -6568562673.258718
[2025-11-24 08:52:53] 2025-11-24 13:52:19,502 | INFO     | chi2: 4.692185913537687
[2025-11-24 08:52:53] 2025-11-24 13:52:19,502 | INFO     | current chi2=4.692185913537687 (change=28.187877197839 %)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,504 | INFO     | sum of square deviations: 2655896570534.142
[2025-11-24 08:52:53] 2025-11-24 13:52:19,582 | INFO     | sum of deviations: 9799966059608.723
[2025-11-24 08:52:53] 2025-11-24 13:52:19,586 | INFO     | mean x: 1763929933.4027371
[2025-11-24 08:52:53] 2025-11-24 13:52:19,586 | INFO     | mean y: 2958697.6568914955
[2025-11-24 08:52:53] 2025-11-24 13:52:19,586 | INFO     | intersect: -6505748633.290911
[2025-11-24 08:52:53] 2025-11-24 13:52:19,589 | INFO     | chi2: 4.634780039404457
[2025-11-24 08:52:53] 2025-11-24 13:52:19,589 | INFO     | current chi2=4.634780039404457 (change=1.223435626614987 %)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,589 | INFO     | left removable region: 20
[2025-11-24 08:52:53] 2025-11-24 13:52:19,605 | INFO     | sum of square deviations: 2574956484854.858
[2025-11-24 08:52:53] 2025-11-24 13:52:19,706 | INFO     | sum of deviations: 10430737761040.387
[2025-11-24 08:52:53] 2025-11-24 13:52:19,706 | INFO     | mean x: 1763929903.008395
[2025-11-24 08:52:53] 2025-11-24 13:52:19,707 | INFO     | mean y: 2968009.6232098765
[2025-11-24 08:52:53] 2025-11-24 13:52:19,707 | INFO     | intersect: -7142430506.956021
[2025-11-24 08:52:53] 2025-11-24 13:52:19,709 | INFO     | chi2: 0.67837561993246
[2025-11-24 08:52:53] 2025-11-24 13:52:19,709 | INFO     | current memory leak: 4.05 B/s (using 2025 data points, chi2=0.68)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,711 | INFO     | could have reported an average CPU frequency of 2666 MHz (71 samples)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,711 | INFO     | ..............................
[2025-11-24 08:52:53] 2025-11-24 13:52:19,711 | INFO     | . Timing measurements:
[2025-11-24 08:52:53] 2025-11-24 13:52:19,712 | INFO     | . get job = 0 s
[2025-11-24 08:52:53] 2025-11-24 13:52:19,712 | INFO     | . initial setup = 1 s
[2025-11-24 08:52:53] 2025-11-24 13:52:19,712 | INFO     | . payload setup = 6 s
[2025-11-24 08:52:53] 2025-11-24 13:52:19,712 | INFO     | . stage-in = 1 s
[2025-11-24 08:52:53] 2025-11-24 13:52:19,712 | INFO     | . payload execution = 125383 s
[2025-11-24 08:52:53] 2025-11-24 13:52:19,712 | INFO     | . stage-out = 4 s
[2025-11-24 08:52:53] 2025-11-24 13:52:19,712 | INFO     | . log creation = 1 s
[2025-11-24 08:52:53] 2025-11-24 13:52:19,712 | INFO     | ..............................
[2025-11-24 08:52:53] 2025-11-24 13:52:19,938 | INFO     | 
[2025-11-24 08:52:53] 2025-11-24 13:52:19,938 | INFO     | job summary report
[2025-11-24 08:52:53] 2025-11-24 13:52:19,938 | INFO     | --------------------------------------------------
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | PanDA job id: 6894256548
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | task id: 47533967
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | errors: (none)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | pilot state: finished 
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | transexitcode: 0
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | exeerrorcode: 0
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | exeerrordiag: 
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | exitcode: 0
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | exitmsg: OK
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | cpuconsumptiontime: 273356 s
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | nevents: 1000
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | neventsw: 0
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | pid: 3429455
[2025-11-24 08:52:53] 2025-11-24 13:52:19,939 | INFO     | pgrp: 3429455
[2025-11-24 08:52:53] 2025-11-24 13:52:19,940 | INFO     | corecount: 8
[2025-11-24 08:52:53] 2025-11-24 13:52:19,940 | INFO     | event service: False
[2025-11-24 08:52:53] 2025-11-24 13:52:19,940 | INFO     | sizes: {0: 2298806, 7: 2299068, 11: 2299096, 125393: 2381776, 125394: 2381775, 125398: 2391616, 125399: 2391800, 125412: 2392046}
[2025-11-24 08:52:53] 2025-11-24 13:52:19,940 | INFO     | --------------------------------------------------
[2025-11-24 08:52:53] 2025-11-24 13:52:19,940 | INFO     | 
[2025-11-24 08:52:53] 2025-11-24 13:52:19,940 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-24 08:52:53] 2025-11-24 13:52:19,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | job 6894256548 has completed (purged errors)
[2025-11-24 08:52:53] 2025-11-24 13:52:19,990 | INFO     | overall cleanup function is called
[2025-11-24 08:52:53] 2025-11-24 13:52:21,019 | INFO     | --- collectZombieJob: --- 10, [3429455]
[2025-11-24 08:52:53] 2025-11-24 13:52:21,019 | INFO     | zombie collector waiting for pid 3429455
[2025-11-24 08:52:53] 2025-11-24 13:52:21,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 08:52:53] 2025-11-24 13:52:21,019 | INFO     | collected zombie processes
[2025-11-24 08:52:53] 2025-11-24 13:52:21,019 | INFO     | will attempt to kill all subprocesses of pid=3429455
[2025-11-24 08:52:53] 2025-11-24 13:52:21,324 | INFO     | process IDs to be killed: [3429455] (in reverse order)
[2025-11-24 08:52:53] 2025-11-24 13:52:21,448 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 08:52:53] 2025-11-24 13:52:21,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 08:52:53] 2025-11-24 13:52:21,518 | INFO     | did not find any defunct processes belonging to 3429455
[2025-11-24 08:52:53] 2025-11-24 13:52:21,534 | INFO     | did not find any defunct processes belonging to 3429455
[2025-11-24 08:52:53] 2025-11-24 13:52:21,540 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 08:52:53] 2025-11-24 13:52:21,540 | INFO     | ready for new job
[2025-11-24 08:52:53] 2025-11-24 13:52:21,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 08:52:53] 2025-11-24 13:52:21,556 | INFO     | ***************************************
[2025-11-24 08:52:53] 2025-11-24 13:52:21,556 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 08:52:53] 2025-11-24 13:52:21,556 | INFO     | ***************************************
[2025-11-24 08:52:53] 2025-11-24 13:52:21,556 | INFO     | 
[2025-11-24 08:52:53] 2025-11-24 13:52:21,563 | INFO     | architecture information:
[2025-11-24 08:52:53] 2025-11-24 13:52:21,564 | INFO     | executing command: cat /etc/os-release
[2025-11-24 08:52:53] 2025-11-24 13:52:21,597 | INFO     | cat /etc/os-release:
[2025-11-24 08:52:53] NAME="CentOS Linux"
[2025-11-24 08:52:53] VERSION="7 (Core)"
[2025-11-24 08:52:53] ID="centos"
[2025-11-24 08:52:53] ID_LIKE="rhel fedora"
[2025-11-24 08:52:53] VERSION_ID="7"
[2025-11-24 08:52:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 08:52:53] ANSI_COLOR="0;31"
[2025-11-24 08:52:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 08:52:53] HOME_URL="https://www.centos.org/"
[2025-11-24 08:52:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 08:52:53] 
[2025-11-24 08:52:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 08:52:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 08:52:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 08:52:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 08:52:53] 
[2025-11-24 08:52:53] 2025-11-24 13:52:21,598 | INFO     | ***************************************
[2025-11-24 08:52:53] 2025-11-24 13:52:22,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-24 08:52:53] 2025-11-24 13:52:22,147 | INFO     | sufficient remaining disk space (69294096384 B)
[2025-11-24 08:52:53] 2025-11-24 13:52:22,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 08:52:53] 2025-11-24 13:52:22,147 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 08:52:53] 2025-11-24 13:52:22,147 | INFO     | update_server=False
[2025-11-24 08:52:53] 2025-11-24 13:52:22,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 08:52:53] 2025-11-24 13:52:22,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 08:52:53] 2025-11-24 13:52:22,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 08:52:53] 2025-11-24 13:52:22,151 | INFO     | aborting loop
[2025-11-24 08:52:53] 2025-11-24 13:52:22,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 08:52:53] 2025-11-24 13:52:22,644 | INFO     | all job control threads have been joined
[2025-11-24 08:52:53] 2025-11-24 13:52:23,006 | INFO     | all payload control threads have been joined
[2025-11-24 08:52:53] 2025-11-24 13:52:23,081 | INFO     | all data control threads have been joined
[2025-11-24 08:52:53] 2025-11-24 13:52:23,153 | INFO     | [job] retrieve thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,157 | INFO     | [job] job monitor thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,164 | INFO     | [payload] failed_post thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,250 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,562 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,623 | INFO     | [payload] validate_post thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,643 | INFO     | [data] copytool_in thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,650 | INFO     | [job] control thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,953 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:23,963 | INFO     | [job] validate thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:24,012 | INFO     | [payload] control thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:24,087 | INFO     | [data] control thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:24,155 | INFO     | [data] copytool_out thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:24,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 08:52:53] 2025-11-24 13:52:25,960 | INFO     | [job] queue monitor thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:26,227 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 08:52:53] 2025-11-24 13:52:46,821 | INFO     | [monitor] cgroup control has ended
[2025-11-24 08:52:53] 2025-11-24 13:52:47,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140292997125952)>', '<ExcThread(monitor, started 140292640446208)>']
[2025-11-24 08:52:53] 2025-11-24 13:52:52,884 | INFO     | all workflow threads have been joined
[2025-11-24 08:52:53] 2025-11-24 13:52:52,884 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 08:52:53] 2025-11-24 13:52:52,884 | INFO     | traces error code: 0
[2025-11-24 08:52:53] 2025-11-24 13:52:52,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 08:52:53] 2025-11-24 13:52:52,912 | INFO     | PID=3403675 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 08:52:53] 2025-11-24 13:52:52,912 | INFO     | .. there are 11 such processes running
[2025-11-24 08:52:53] 2025-11-24 13:52:52,913 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 08:52:53] 2025-11-24 13:52:52,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 08:52:53] 2025-11-24 13:52:52,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 08:52:53] 2025-11-24 13:52:52,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 08:52:53] 2025-11-24 13:52:52,914 | CRITICAL | thread 'MainThread' is not alive
[2025-11-24 08:52:53] 2025-11-24 13:52:52,914 | INFO     | [monitor] control thread has ended
[2025-11-24 08:52:53] 2025-11-24 13:52:53,062 [wrapper] ==== pilot stdout END ====
[2025-11-24 08:52:53] 2025-11-24 13:52:53,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 08:52:53] 2025-11-24 13:52:53,068 [wrapper] pilotpid: 3403675
[2025-11-24 08:52:53] 2025-11-24 13:52:53,071 [wrapper] Pilot exit status: 0
[2025-11-24 08:52:53] 2025-11-24 13:52:53,145 [wrapper] pandaids: 6894256548 6894256548 6894256548
[2025-11-24 08:52:53] 2025-11-24 13:52:53,288 [wrapper] cleanup supervisor_pilot 2448564 3403676
[2025-11-24 08:52:53] 2025-11-24 13:52:53,302 [wrapper] Test setup, not cleaning
[2025-11-24 08:52:53] 2025-11-24 13:52:53,307 [wrapper] apfmon messages muted
[2025-11-24 08:52:53] 2025-11-24 13:52:53,311 [wrapper] ==== wrapper stdout END ====
[2025-11-24 08:52:53] 2025-11-24 13:52:53,314 [wrapper] ==== wrapper stderr END ====
[2025-11-24 08:52:53]  *** Error codes and diagnostics ***
[2025-11-24 08:52:53]     "exeErrorCode": 0,
[2025-11-24 08:52:53]     "exeErrorDiag": "",
[2025-11-24 08:52:53]     "pilotErrorCode": 0,
[2025-11-24 08:52:53]     "pilotErrorDiag": "",
[2025-11-24 08:52:53]  *** Listing of results directory ***
[2025-11-24 08:52:53] total 1746732
[2025-11-24 08:52:53] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 21:51 pilot3.tar.gz
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 22:07 queuedata.json
[2025-11-24 08:52:53] -rwx------. 1 boincer umatlas     36292 Nov 20 22:09 runpilot2-wrapper.sh
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas       100 Nov 21 11:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 08:52:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 11:39 run_atlas
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas       105 Nov 21 11:39 job.xml
[2025-11-24 08:52:53] -rw-r--r--. 3 boincer umatlas 413363425 Nov 21 11:39 EVNT.47493127._002145.pool.root.1
[2025-11-24 08:52:53] -rw-r--r--. 3 boincer umatlas 413363425 Nov 21 11:39 ATLAS.root_0
[2025-11-24 08:52:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 11:39 start_atlas.sh
[2025-11-24 08:52:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 11:39 shared
[2025-11-24 08:52:53] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 11:39 input.tar.gz
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas         0 Nov 21 11:39 boinc_lockfile
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas      2785 Nov 22 22:01 pandaJob.out
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas        57 Nov 22 22:01 setup.sh.local
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas    989784 Nov 22 22:01 agis_schedconf.cvmfs.json
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas       534 Nov 24 08:41 boinc_task_state.xml
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas      6844 Nov 24 08:46 init_data.xml
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas 921195292 Nov 24 08:51 HITS.47533967._001169.pool.root.1
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas      1072 Nov 24 08:51 memory_monitor_summary.json
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas   1516227 Nov 24 08:52 agis_ddmendpoints.agis.ALL.json
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas   2876231 Nov 24 08:52 log.47533967._001169.job.log.tgz.1
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas      8654 Nov 24 08:52 heartbeat.json
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 08:52 boinc_mmap_file
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas        30 Nov 24 08:52 wrapper_checkpoint.txt
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas        96 Nov 24 08:52 pilot_heartbeat.json
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas       893 Nov 24 08:52 pilotlog.txt
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas  15538296 Nov 24 08:52 log.47533967._001169.job.log.1
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas       353 Nov 24 08:52 output.list
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas       620 Nov 24 08:52 runtime_log
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas  18432000 Nov 24 08:52 result.tar.gz
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas      9439 Nov 24 08:52 runtime_log.err
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas       919 Nov 24 08:52 58sNDmshWg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXHHKDmthyZNo.diag
[2025-11-24 08:52:53] -rw-r--r--. 1 boincer umatlas      6380 Nov 24 08:52 stderr.txt
[2025-11-24 08:52:53] HITS file was successfully produced:
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas 921195292 Nov 24 08:51 shared/HITS.pool.root.1
[2025-11-24 08:52:53]  *** Contents of shared directory: ***
[2025-11-24 08:52:53] total 1321888
[2025-11-24 08:52:53] -rw-r--r--. 3 boincer umatlas 413363425 Nov 21 11:39 ATLAS.root_0
[2025-11-24 08:52:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 11:39 start_atlas.sh
[2025-11-24 08:52:53] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 11:39 input.tar.gz
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas 921195292 Nov 24 08:51 HITS.pool.root.1
[2025-11-24 08:52:53] -rw-------. 1 boincer umatlas  18432000 Nov 24 08:52 result.tar.gz
08:52:54 (3392082): run_atlas exited; CPU time 275212.862419
08:52:54 (3392082): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN