Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:16:17 (756836): wrapper (7.7.26015): starting
06:16:17 (756836): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 06:16:17] Arguments: --nthreads 4
[2025-11-24 06:16:17] Threads: 4
[2025-11-24 06:16:17] Checking for CVMFS
[2025-11-24 06:16:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 06:16:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 06:16:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 06:16:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 06:16:17] 2.9.2.0 3008 5003 83468 153234 0 81 33162370 36864001 651 130560 0 2240303 99.978 285705 7974 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 06:16:17] CVMFS is ok
[2025-11-24 06:16:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 06:16:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 06:16:17] Further information can be found at the LHC@home message board.
[2025-11-24 06:16:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 06:16:17] Checking for apptainer binary...
[2025-11-24 06:16:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 06:16:17] Running /usr/bin/apptainer --version
[2025-11-24 06:16:17] apptainer version 1.4.1-1.1
[2025-11-24 06:16:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 06:16:17] belleA267b
[2025-11-24 06:16:17] apptainer works
[2025-11-24 06:16:17] Set ATHENA_PROC_NUMBER=4
[2025-11-24 06:16:17] Set ATHENA_CORE_NUMBER=4
[2025-11-24 06:16:18] Starting ATLAS job with PandaID=6894283564
[2025-11-24 06:16:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 13:10:03]  *** The last 200 lines of the pilot log: ***
[2025-11-24 13:10:03] 2025-11-24 12:09:31,907 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 13:10:03] 2025-11-24 12:09:31,907 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 13:10:03] 2025-11-24 12:09:31,910 | INFO     | fitting pss+swap vs Time
[2025-11-24 13:10:03] 2025-11-24 12:09:31,910 | INFO     | sum of square deviations: 20751710017.5
[2025-11-24 13:10:03] 2025-11-24 12:09:31,912 | INFO     | sum of deviations: 252914499221.49997
[2025-11-24 13:10:03] 2025-11-24 12:09:31,912 | INFO     | mean x: 1763973761.5
[2025-11-24 13:10:03] 2025-11-24 12:09:31,912 | INFO     | mean y: 2368907.450738916
[2025-11-24 13:10:03] 2025-11-24 12:09:31,912 | INFO     | intersect: -21496319159.865692
[2025-11-24 13:10:03] 2025-11-24 12:09:31,912 | INFO     | chi2: 3.600998145513774
[2025-11-24 13:10:03] 2025-11-24 12:09:31,912 | INFO     | sum of square deviations: 19994421400.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,914 | INFO     | sum of deviations: 293930952993.00006
[2025-11-24 13:10:03] 2025-11-24 12:09:31,914 | INFO     | mean x: 1763973609.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,914 | INFO     | mean y: 2377105.7556109726
[2025-11-24 13:10:03] 2025-11-24 12:09:31,914 | INFO     | intersect: -25929178180.353928
[2025-11-24 13:10:03] 2025-11-24 12:09:31,914 | INFO     | chi2: 2.62195710461964
[2025-11-24 13:10:03] 2025-11-24 12:09:31,914 | INFO     | current chi2=2.62195710461964 (change=27.188046239730813 %)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,914 | INFO     | sum of square deviations: 19255784295.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,915 | INFO     | sum of deviations: 285959744565.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,915 | INFO     | mean x: 1763973456.5
[2025-11-24 13:10:03] 2025-11-24 12:09:31,916 | INFO     | mean y: 2375460.388888889
[2025-11-24 13:10:03] 2025-11-24 12:09:31,916 | INFO     | intersect: -26193669910.30839
[2025-11-24 13:10:03] 2025-11-24 12:09:31,916 | INFO     | chi2: 2.6219969942801273
[2025-11-24 13:10:03] 2025-11-24 12:09:31,916 | INFO     | current chi2=2.6219969942801273 (change=-0.001521369682856303 %)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,916 | INFO     | right removable region: 395
[2025-11-24 13:10:03] 2025-11-24 12:09:31,916 | INFO     | sum of square deviations: 19994421400.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,917 | INFO     | sum of deviations: 157706904246.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,917 | INFO     | mean x: 1763973914.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,918 | INFO     | mean y: 2388049.922693267
[2025-11-24 13:10:03] 2025-11-24 12:09:31,918 | INFO     | intersect: -13911036078.851538
[2025-11-24 13:10:03] 2025-11-24 12:09:31,918 | INFO     | chi2: 1.3889253135524393
[2025-11-24 13:10:03] 2025-11-24 12:09:31,918 | INFO     | current chi2=1.3889253135524393 (change=61.42943546686348 %)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,918 | INFO     | sum of square deviations: 19255784295.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,919 | INFO     | sum of deviations: 123530953294.99997
[2025-11-24 13:10:03] 2025-11-24 12:09:31,919 | INFO     | mean x: 1763974066.5
[2025-11-24 13:10:03] 2025-11-24 12:09:31,919 | INFO     | mean y: 2395072.51010101
[2025-11-24 13:10:03] 2025-11-24 12:09:31,919 | INFO     | intersect: -11313965491.363918
[2025-11-24 13:10:03] 2025-11-24 12:09:31,920 | INFO     | chi2: 1.02806643749802
[2025-11-24 13:10:03] 2025-11-24 12:09:31,920 | INFO     | current chi2=1.02806643749802 (change=25.981157700370115 %)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,920 | INFO     | sum of square deviations: 18535566140.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,921 | INFO     | sum of deviations: 112932374583.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,921 | INFO     | mean x: 1763974219.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,921 | INFO     | mean y: 2397315.987212276
[2025-11-24 13:10:03] 2025-11-24 12:09:31,921 | INFO     | intersect: -10745037952.52425
[2025-11-24 13:10:03] 2025-11-24 12:09:31,922 | INFO     | chi2: 1.0206614926012567
[2025-11-24 13:10:03] 2025-11-24 12:09:31,922 | INFO     | current chi2=1.0206614926012567 (change=0.7202788289426583 %)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,922 | INFO     | left removable region: 30
[2025-11-24 13:10:03] 2025-11-24 12:09:31,922 | INFO     | sum of square deviations: 15078347830.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,923 | INFO     | sum of deviations: 123044791773.99998
[2025-11-24 13:10:03] 2025-11-24 12:09:31,923 | INFO     | mean x: 1763974341.0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,923 | INFO     | mean y: 2410264.7726027397
[2025-11-24 13:10:03] 2025-11-24 12:09:31,923 | INFO     | intersect: -14392260685.262367
[2025-11-24 13:10:03] 2025-11-24 12:09:31,923 | INFO     | chi2: 0.02679493801711765
[2025-11-24 13:10:03] 2025-11-24 12:09:31,923 | INFO     | current memory leak: 8.16 B/s (using 365 data points, chi2=0.03)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | could have reported an average CPU frequency of 3936 MHz (17 samples)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | ..............................
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | . Timing measurements:
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | . get job = 0 s
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | . initial setup = 1 s
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | . payload setup = 4 s
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | . stage-in = 0 s
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | . payload execution = 24758 s
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | . stage-out = 1 s
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | . log creation = 0 s
[2025-11-24 13:10:03] 2025-11-24 12:09:31,924 | INFO     | ..............................
[2025-11-24 13:10:03] 2025-11-24 12:09:31,963 | INFO     | 
[2025-11-24 13:10:03] 2025-11-24 12:09:31,963 | INFO     | job summary report
[2025-11-24 13:10:03] 2025-11-24 12:09:31,963 | INFO     | --------------------------------------------------
[2025-11-24 13:10:03] 2025-11-24 12:09:31,963 | INFO     | PanDA job id: 6894283564
[2025-11-24 13:10:03] 2025-11-24 12:09:31,963 | INFO     | task id: 47533967
[2025-11-24 13:10:03] 2025-11-24 12:09:31,963 | INFO     | errors: (none)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,963 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 13:10:03] 2025-11-24 12:09:31,963 | INFO     | pilot state: finished 
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | transexitcode: 0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | exeerrorcode: 0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | exeerrordiag: 
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | exitcode: 0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | exitmsg: OK
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | cpuconsumptiontime: 97140 s
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | nevents: 1000
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | neventsw: 0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | pid: 767232
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | pgrp: 767232
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | corecount: 4
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | event service: False
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | sizes: {0: 2298810, 1: 2298810, 4: 2299100, 11: 2299128, 24765: 2336144, 24766: 2345935, 24768: 2346119, 24772: 2346429}
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | --------------------------------------------------
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | 
[2025-11-24 13:10:03] 2025-11-24 12:09:31,964 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,983 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,984 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 13:10:03] 2025-11-24 12:09:31,984 | INFO     | job 6894283564 has completed (purged errors)
[2025-11-24 13:10:03] 2025-11-24 12:09:31,984 | INFO     | overall cleanup function is called
[2025-11-24 13:10:03] 2025-11-24 12:09:32,991 | INFO     | --- collectZombieJob: --- 10, [767232]
[2025-11-24 13:10:03] 2025-11-24 12:09:32,991 | INFO     | zombie collector waiting for pid 767232
[2025-11-24 13:10:03] 2025-11-24 12:09:32,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 13:10:03] 2025-11-24 12:09:32,991 | INFO     | collected zombie processes
[2025-11-24 13:10:03] 2025-11-24 12:09:32,991 | INFO     | will attempt to kill all subprocesses of pid=767232
[2025-11-24 13:10:03] 2025-11-24 12:09:33,034 | INFO     | process IDs to be killed: [767232] (in reverse order)
[2025-11-24 13:10:03] 2025-11-24 12:09:33,066 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 13:10:03] 2025-11-24 12:09:33,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 13:10:03] 2025-11-24 12:09:33,068 | INFO     | did not find any defunct processes belonging to 767232
[2025-11-24 13:10:03] 2025-11-24 12:09:33,070 | INFO     | did not find any defunct processes belonging to 767232
[2025-11-24 13:10:03] 2025-11-24 12:09:33,070 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 13:10:03] 2025-11-24 12:09:33,070 | INFO     | ready for new job
[2025-11-24 13:10:03] 2025-11-24 12:09:33,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 13:10:03] 2025-11-24 12:09:33,072 | INFO     | ***************************************
[2025-11-24 13:10:03] 2025-11-24 12:09:33,072 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 13:10:03] 2025-11-24 12:09:33,072 | INFO     | ***************************************
[2025-11-24 13:10:03] 2025-11-24 12:09:33,072 | INFO     | 
[2025-11-24 13:10:03] 2025-11-24 12:09:33,072 | INFO     | architecture information:
[2025-11-24 13:10:03] 2025-11-24 12:09:33,073 | INFO     | executing command: cat /etc/os-release
[2025-11-24 13:10:03] 2025-11-24 12:09:33,087 | INFO     | cat /etc/os-release:
[2025-11-24 13:10:03] NAME="CentOS Linux"
[2025-11-24 13:10:03] VERSION="7 (Core)"
[2025-11-24 13:10:03] ID="centos"
[2025-11-24 13:10:03] ID_LIKE="rhel fedora"
[2025-11-24 13:10:03] VERSION_ID="7"
[2025-11-24 13:10:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 13:10:03] ANSI_COLOR="0;31"
[2025-11-24 13:10:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 13:10:03] HOME_URL="https://www.centos.org/"
[2025-11-24 13:10:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 13:10:03] 
[2025-11-24 13:10:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 13:10:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 13:10:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 13:10:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 13:10:03] 
[2025-11-24 13:10:03] 2025-11-24 12:09:33,087 | INFO     | ***************************************
[2025-11-24 13:10:03] 2025-11-24 12:09:33,590 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 13:10:03] 2025-11-24 12:09:33,605 | INFO     | sufficient remaining disk space (178273648640 B)
[2025-11-24 13:10:03] 2025-11-24 12:09:33,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 13:10:03] 2025-11-24 12:09:33,606 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 13:10:03] 2025-11-24 12:09:33,606 | INFO     | update_server=False
[2025-11-24 13:10:03] 2025-11-24 12:09:33,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 13:10:03] 2025-11-24 12:09:33,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:10:03] 2025-11-24 12:09:33,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:10:03] 2025-11-24 12:09:33,606 | INFO     | aborting loop
[2025-11-24 13:10:03] 2025-11-24 12:09:33,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 13:10:03] 2025-11-24 12:09:33,997 | INFO     | all payload control threads have been joined
[2025-11-24 13:10:03] 2025-11-24 12:09:34,256 | INFO     | all job control threads have been joined
[2025-11-24 13:10:03] 2025-11-24 12:09:34,272 | INFO     | all data control threads have been joined
[2025-11-24 13:10:03] 2025-11-24 12:09:34,611 | INFO     | [job] retrieve thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:34,611 | INFO     | [job] job monitor thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:34,611 | INFO     | [job] queue monitor thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:34,693 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 13:10:03] 2025-11-24 12:09:34,771 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:35,002 | INFO     | [payload] control thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:35,261 | INFO     | [job] control thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:35,277 | INFO     | [data] control thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:35,340 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:35,444 | INFO     | [data] copytool_in thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:35,868 | INFO     | [job] validate thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:35,970 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:35,982 | INFO     | [payload] validate_post thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:35,985 | INFO     | [payload] failed_post thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:36,699 | INFO     | [data] copytool_out thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:37,890 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:44,104 | INFO     | job.realtimelogging is not enabled
[2025-11-24 13:10:03] 2025-11-24 12:09:45,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 13:10:03] 2025-11-24 12:09:55,866 | INFO     | [monitor] cgroup control has ended
[2025-11-24 13:10:03] 2025-11-24 12:09:57,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679661274944)>', '<ExcThread(monitor, started 140679011354368)>']
[2025-11-24 13:10:03] 2025-11-24 12:10:02,440 | INFO     | all workflow threads have been joined
[2025-11-24 13:10:03] 2025-11-24 12:10:02,440 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 13:10:03] 2025-11-24 12:10:02,440 | INFO     | traces error code: 0
[2025-11-24 13:10:03] 2025-11-24 12:10:02,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 13:10:03] 2025-11-24 12:10:03,759 | INFO     | PID=760639 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 13:10:03] 2025-11-24 12:10:03,760 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 13:10:03] 2025-11-24 12:10:03,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 13:10:03] 2025-11-24 12:10:03,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 13:10:03] 2025-11-24 12:10:03,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 13:10:03] 2025-11-24 12:10:03,760 | INFO     | [monitor] control thread has ended
[2025-11-24 13:10:03] 2025-11-24 12:10:03,845 [wrapper] ==== pilot stdout END ====
[2025-11-24 13:10:03] 2025-11-24 12:10:03,849 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 13:10:03] 2025-11-24 12:10:03,852 [wrapper] pilotpid: 760639
[2025-11-24 13:10:03] 2025-11-24 12:10:03,857 [wrapper] Pilot exit status: 0
[2025-11-24 13:10:03] 2025-11-24 12:10:03,868 [wrapper] pandaids: 6894283564
[2025-11-24 13:10:03] 2025-11-24 12:10:03,890 [wrapper] cleanup supervisor_pilot  816506 760640
[2025-11-24 13:10:03] 2025-11-24 12:10:03,894 [wrapper] Test setup, not cleaning
[2025-11-24 13:10:03] 2025-11-24 12:10:03,898 [wrapper] apfmon messages muted
[2025-11-24 13:10:03] 2025-11-24 12:10:03,901 [wrapper] ==== wrapper stdout END ====
[2025-11-24 13:10:03] 2025-11-24 12:10:03,904 [wrapper] ==== wrapper stderr END ====
[2025-11-24 13:10:03]  *** Error codes and diagnostics ***
[2025-11-24 13:10:03]     "exeErrorCode": 0,
[2025-11-24 13:10:03]     "exeErrorDiag": "",
[2025-11-24 13:10:03]     "pilotErrorCode": 0,
[2025-11-24 13:10:03]     "pilotErrorDiag": "",
[2025-11-24 13:10:03]  *** Listing of results directory ***
[2025-11-24 13:10:03] total 1314284
[2025-11-24 13:10:03] -rwx------ 1 boinc boinc     36292 Nov 21 10:27 runpilot2-wrapper.sh
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc      5112 Nov 21 10:27 queuedata.json
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc    576529 Nov 21 10:27 pilot3.tar.gz
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc       100 Nov 24 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 13:10:03] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 06:16 run_atlas
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc       105 Nov 24 06:16 job.xml
[2025-11-24 13:10:03] -rw-r--r-- 2 boinc boinc 410203432 Nov 24 06:16 EVNT.47493127._002350.pool.root.1
[2025-11-24 13:10:03] drwxrwx--x 2 boinc boinc      4096 Nov 24 06:16 shared
[2025-11-24 13:10:03] -rw-r--r-- 2 boinc boinc    590105 Nov 24 06:16 input.tar.gz
[2025-11-24 13:10:03] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:16 start_atlas.sh
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc         0 Nov 24 06:16 boinc_setup_complete
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc      6380 Nov 24 06:16 init_data.xml
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc         0 Nov 24 06:16 boinc_lockfile
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc      2786 Nov 24 06:16 pandaJob.out
[2025-11-24 13:10:03] -rw------- 1 boinc boinc    989786 Nov 24 06:16 agis_schedconf.cvmfs.json
[2025-11-24 13:10:03] drwx------ 5 boinc boinc      4096 Nov 24 06:16 pilot3
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc       531 Nov 24 13:05 boinc_task_state.xml
[2025-11-24 13:10:03] -rw------- 1 boinc boinc 922206985 Nov 24 13:09 HITS.47533967._003220.pool.root.1
[2025-11-24 13:10:03] -rw------- 1 boinc boinc      1032 Nov 24 13:09 memory_monitor_summary.json
[2025-11-24 13:10:03] -rw------- 1 boinc boinc   1516227 Nov 24 13:09 agis_ddmendpoints.agis.ALL.json
[2025-11-24 13:10:03] -rw------- 1 boinc boinc   1261417 Nov 24 13:09 log.47533967._003220.job.log.tgz.1
[2025-11-24 13:10:03] -rw------- 1 boinc boinc      8593 Nov 24 13:09 heartbeat.json
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc      8192 Nov 24 13:09 boinc_mmap_file
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc        28 Nov 24 13:09 wrapper_checkpoint.txt
[2025-11-24 13:10:03] -rw------- 1 boinc boinc       746 Nov 24 13:10 pilotlog.txt
[2025-11-24 13:10:03] -rw------- 1 boinc boinc        95 Nov 24 13:10 pilot_heartbeat.json
[2025-11-24 13:10:03] -rw------- 1 boinc boinc   3492987 Nov 24 13:10 log.47533967._003220.job.log.1
[2025-11-24 13:10:03] -rw------- 1 boinc boinc       353 Nov 24 13:10 output.list
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc       620 Nov 24 13:10 runtime_log
[2025-11-24 13:10:03] -rw------- 1 boinc boinc   4771840 Nov 24 13:10 result.tar.gz
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc      8918 Nov 24 13:10 runtime_log.err
[2025-11-24 13:10:03] -rw------- 1 boinc boinc       669 Nov 24 13:10 5nGODmMbcg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbVHKDmtIPgFm.diag
[2025-11-24 13:10:03] -rw-r--r-- 1 boinc boinc     21016 Nov 24 13:10 stderr.txt
[2025-11-24 13:10:03] HITS file was successfully produced:
[2025-11-24 13:10:03] -rw------- 1 boinc boinc 922206985 Nov 24 13:09 shared/HITS.pool.root.1
[2025-11-24 13:10:03]  *** Contents of shared directory: ***
[2025-11-24 13:10:03] total 1306452
[2025-11-24 13:10:03] -rw-r--r-- 2 boinc boinc 410203432 Nov 24 06:16 ATLAS.root_0
[2025-11-24 13:10:03] -rw-r--r-- 2 boinc boinc    590105 Nov 24 06:16 input.tar.gz
[2025-11-24 13:10:03] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:16 start_atlas.sh
[2025-11-24 13:10:03] -rw------- 1 boinc boinc 922206985 Nov 24 13:09 HITS.pool.root.1
[2025-11-24 13:10:03] -rw------- 1 boinc boinc   4771840 Nov 24 13:10 result.tar.gz
13:10:05 (756836): run_atlas exited; CPU time 97084.313233
13:10:05 (756836): called boinc_finish(0)

</stderr_txt>
]]>

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