Name vlyLDmewcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1ZFKDmRHtwsn_3
Workunit 237668717
Created 21 Nov 2025, 9:13:29 UTC
Sent 21 Nov 2025, 16:41:01 UTC
Report deadline 29 Nov 2025, 16:41:01 UTC
Received 21 Nov 2025, 20:13:10 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 10696271
Run time 9 min 37 sec
CPU time 1 min 30 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.54 GB
Peak swap size 2.12 GB
Peak disk usage 786.84 MB

Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:50:49 (7380): wrapper (7.7.26015): starting
20:50:49 (7380): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 20:50:49] Arguments: --nthreads 4
[2025-11-21 20:50:49] Threads: 4
[2025-11-21 20:50:49] Checking for CVMFS
[2025-11-21 20:50:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 20:50:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 20:50:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 20:50:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 20:50:49] 2.9.2.0 1896247 5272 104720 153141 0 57 33557411 36864000 0 130560 0 6876181 99.966 469069 6528 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 20:50:49] CVMFS is ok
[2025-11-21 20:50:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 20:50:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 20:50:49] Further information can be found at the LHC@home message board.
[2025-11-21 20:50:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 20:50:49] Checking for apptainer binary...
[2025-11-21 20:50:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 20:50:49] Running /usr/bin/apptainer --version
[2025-11-21 20:50:49] apptainer version 1.4.1-1.1
[2025-11-21 20:50:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 20:50:49] cosA131
[2025-11-21 20:50:49] apptainer works
[2025-11-21 20:50:49] Set ATHENA_PROC_NUMBER=4
[2025-11-21 20:50:49] Set ATHENA_CORE_NUMBER=4
[2025-11-21 20:50:49] Starting ATLAS job with PandaID=6891569540
[2025-11-21 20:50:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:01:03]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | WARNING  | wrong length of table data, x=[1763754681.0, 1763754742.0, 1763754803.0, 1763754864.0, 1763754925.0, 1763754986.0, 1763755047.0], y=[30315.0, 840780.0, 963242.0, 1
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | INFO     | could have reported an average CPU frequency of 3703 MHz (4 samples)
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | ..............................
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . Timing measurements:
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . get job = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . initial setup = 1 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . payload setup = 4 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . stage-in = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . payload execution = 409 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . stage-out = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . log creation = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | ..............................
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6891569540/pilotlog.txt
[2025-11-21 21:01:03] 2025-11-21 20:00:12,492 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 21:01:03] - Log from pilotlog.txt -
[2025-11-21 21:01:03] 2025-11-21 20:00:12,473 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 21:01:03] 2025-11-21 20:00:12,475 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3220.042125
[2025-11-21 21:01:03] 2025-11-21 20:00:12,476 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891569540/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | INFO     | extracted standard info from prmon json
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | WARNING  | wrong length of table data, x=[1763754681.0, 1763754742.0, 1763754803.0, 1763754864.0, 1763754925.0, 1763754986.0, 1763755047.0], y=[30315.0, 840780.0, 963242.0, 1
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | INFO     | could have reported an average CPU frequency of 3703 MHz (4 samples)
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | ..............................
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . Timing measurements:
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . get job = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . initial setup = 1 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . payload setup = 4 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . stage-in = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . payload execution = 409 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . stage-out = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . log creation = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | ..............................
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6891569540/pilotlog.txt
[2025-11-21 21:01:03] 2025-11-21 20:00:12,492 | WARNING  | 
[2025-11-21 21:01:03] [begin log extracts]
[2025-11-21 21:01:03] - Log from pilotlog.txt -
[2025-11-21 21:01:03] 2025-11-21 20:00:12,473 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 21:01:03] 2025-11-21 20:00:12,475 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3220.042125
[2025-11-21 21:01:03] 2025-11-21 20:00:12,476 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891569540/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | INFO     | extracted standard info from prmon json
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | WARNING  | wrong length of table data, x=[1763754681.0, 1763754742.0, 1763754803.0, 1763754864.0, 1763754925.0, 1763754986.0, 1763755047.0], y=[30315.0, 840780.0, 963242.0, 1
[2025-11-21 21:01:03] 2025-11-21 20:00:12,477 | INFO     | could have reported an average CPU frequency of 3703 MHz (4 samples)
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | ..............................
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . Timing measurements:
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . get job = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . initial setup = 1 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . payload setup = 4 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . stage-in = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . payload execution = 409 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . stage-out = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | . log creation = 0 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | ..............................
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 21:01:03] 2025-11-21 20:00:12,478 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6891569540/pilotlog.txt
[2025-11-21 21:01:03] [end log extracts]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,492 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-21 21:01:03] 2025-11-21 20:00:12,492 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | 
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | job summary report
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | --------------------------------------------------
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | PanDA job id: 6891569540
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | task id: 47493068
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 19:58:02,821 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | pilot state: failed 
[2025-11-21 21:01:03] 2025-11-21 20:00:12,593 | INFO     | transexitcode: 65
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | exeerrorcode: 65
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (65); Logfile error in log.EVNTtoHITS: "Segmentation fault: Event counter: 1; Run: 284500; Evt: 115175002; Curre
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | exitcode: 65
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (65); Logfile error in log.EVNTtoHITS: "Segmentation fault: Event counter: 1; Run: 284500; Evt: 115175002; Current al
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | cpuconsumptiontime: 90 s
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | nevents: 0
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | neventsw: 0
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | pid: 17742
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | pgrp: 17742
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | corecount: 4
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | event service: False
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | sizes: {0: 2298799, 3: 2299061, 10: 2299089, 418: 2331650, 420: 2331650, 540: 2331896}
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | --------------------------------------------------
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | 
[2025-11-21 21:01:03] 2025-11-21 20:00:12,594 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-21 21:01:03] 2025-11-21 20:00:12,614 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | job 6891569540 has completed (purged errors)
[2025-11-21 21:01:03] 2025-11-21 20:00:12,615 | INFO     | overall cleanup function is called
[2025-11-21 21:01:03] 2025-11-21 20:00:13,624 | INFO     | --- collectZombieJob: --- 10, [17742]
[2025-11-21 21:01:03] 2025-11-21 20:00:13,624 | INFO     | zombie collector waiting for pid 17742
[2025-11-21 21:01:03] 2025-11-21 20:00:13,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:01:03] 2025-11-21 20:00:13,624 | INFO     | collected zombie processes
[2025-11-21 21:01:03] 2025-11-21 20:00:13,624 | INFO     | will attempt to kill all subprocesses of pid=17742
[2025-11-21 21:01:03] 2025-11-21 20:00:13,679 | INFO     | process IDs to be killed: [17742] (in reverse order)
[2025-11-21 21:01:03] 2025-11-21 20:00:13,716 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:01:03] 2025-11-21 20:00:13,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:01:03] 2025-11-21 20:00:13,718 | INFO     | did not find any defunct processes belonging to 17742
[2025-11-21 21:01:03] 2025-11-21 20:00:13,720 | INFO     | did not find any defunct processes belonging to 17742
[2025-11-21 21:01:03] 2025-11-21 20:00:13,721 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:01:03] 2025-11-21 20:00:13,721 | INFO     | ready for new job
[2025-11-21 21:01:03] 2025-11-21 20:00:13,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:01:03] 2025-11-21 20:00:13,721 | INFO     | ***************************************
[2025-11-21 21:01:03] 2025-11-21 20:00:13,721 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:01:03] 2025-11-21 20:00:13,721 | INFO     | ***************************************
[2025-11-21 21:01:03] 2025-11-21 20:00:13,721 | INFO     | 
[2025-11-21 21:01:03] 2025-11-21 20:00:13,722 | INFO     | architecture information:
[2025-11-21 21:01:03] 2025-11-21 20:00:13,722 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:01:03] 2025-11-21 20:00:13,736 | INFO     | cat /etc/os-release:
[2025-11-21 21:01:03] NAME="CentOS Linux"
[2025-11-21 21:01:03] VERSION="7 (Core)"
[2025-11-21 21:01:03] ID="centos"
[2025-11-21 21:01:03] ID_LIKE="rhel fedora"
[2025-11-21 21:01:03] VERSION_ID="7"
[2025-11-21 21:01:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:01:03] ANSI_COLOR="0;31"
[2025-11-21 21:01:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:01:03] HOME_URL="https://www.centos.org/"
[2025-11-21 21:01:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:01:03] 
[2025-11-21 21:01:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:01:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:01:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:01:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:01:03] 
[2025-11-21 21:01:03] 2025-11-21 20:00:13,737 | INFO     | ***************************************
[2025-11-21 21:01:03] 2025-11-21 20:00:14,238 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-21 21:01:03] 2025-11-21 20:00:14,255 | INFO     | sufficient remaining disk space (326619889664 B)
[2025-11-21 21:01:03] 2025-11-21 20:00:14,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:01:03] 2025-11-21 20:00:14,255 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:01:03] 2025-11-21 20:00:14,255 | INFO     | update_server=False
[2025-11-21 21:01:03] 2025-11-21 20:00:14,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:01:03] 2025-11-21 20:00:14,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:01:03] 2025-11-21 20:00:14,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:01:03] 2025-11-21 20:00:14,256 | INFO     | aborting loop
[2025-11-21 21:01:03] 2025-11-21 20:00:14,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:01:03] 2025-11-21 20:00:14,756 | INFO     | all job control threads have been joined
[2025-11-21 21:01:03] 2025-11-21 20:00:14,801 | INFO     | all data control threads have been joined
[2025-11-21 21:01:03] 2025-11-21 20:00:15,260 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:15,261 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:15,261 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:15,314 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:15,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:01:03] 2025-11-21 20:00:15,439 | INFO     | all payload control threads have been joined
[2025-11-21 21:01:03] 2025-11-21 20:00:15,762 | INFO     | [job] control thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:15,806 | INFO     | [data] control thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:15,897 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:15,925 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:16,199 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:16,262 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:16,287 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:16,445 | INFO     | [payload] control thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:16,445 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:16,604 | INFO     | [job] validate thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:16,747 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:19,386 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:01:03] 2025-11-21 20:00:44,823 | INFO     | PID=11170 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 21:01:03] 2025-11-21 20:00:44,823 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:01:03] 2025-11-21 20:00:44,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:01:03] 2025-11-21 20:00:44,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:01:03] 2025-11-21 20:00:57,714 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:01:03] 2025-11-21 20:00:58,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830973015872)>', '<ExcThread(monitor, started 139830025508608)>']
[2025-11-21 21:01:03] 2025-11-21 20:00:58,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:01:03] 2025-11-21 20:00:58,899 | INFO     | [monitor] control thread has ended
[2025-11-21 21:01:03] 2025-11-21 20:01:03,526 | INFO     | all workflow threads have been joined
[2025-11-21 21:01:03] 2025-11-21 20:01:03,526 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:01:03] 2025-11-21 20:01:03,526 | INFO     | traces error code: 0
[2025-11-21 21:01:03] 2025-11-21 20:01:03,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:01:03] 2025-11-21 20:01:03,601 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:01:03] 2025-11-21 20:01:03,606 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:01:03] 2025-11-21 20:01:03,610 [wrapper] pilotpid: 11170
[2025-11-21 21:01:03] 2025-11-21 20:01:03,614 [wrapper] Pilot exit status: 0
[2025-11-21 21:01:03] 2025-11-21 20:01:03,626 [wrapper] pandaids: 6891569540
[2025-11-21 21:01:03] 2025-11-21 20:01:03,650 [wrapper] cleanup supervisor_pilot   11176 11171
[2025-11-21 21:01:03] 2025-11-21 20:01:03,654 [wrapper] Test setup, not cleaning
[2025-11-21 21:01:03] 2025-11-21 20:01:03,658 [wrapper] apfmon messages muted
[2025-11-21 21:01:03] 2025-11-21 20:01:03,661 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:01:03] 2025-11-21 20:01:03,665 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:01:03]  *** Error codes and diagnostics ***
[2025-11-21 21:01:03]     "exeErrorCode": 65,
[2025-11-21 21:01:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (65); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 1; Run: 284500; Evt: 115175002; Current algorithm: ISF_Kernel_FullG4; Current Function: unknown\"",
[2025-11-21 21:01:03]     "pilotErrorCode": 1305,
[2025-11-21 21:01:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (65); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 1; Run: 284500; Evt: 115175002; Current algorit",
[2025-11-21 21:01:03]  *** Listing of results directory ***
[2025-11-21 21:01:03] total 403628
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:35 queuedata.json
[2025-11-21 21:01:03] -rwx------ 1 boinc boinc     36292 Nov 18 16:37 runpilot2-wrapper.sh
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc       100 Nov 21 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:01:03] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 20:50 run_atlas
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc       105 Nov 21 20:50 job.xml
[2025-11-21 21:01:03] -rw-r--r-- 2 boinc boinc 408207656 Nov 21 20:50 EVNT.47493065._000207.pool.root.1
[2025-11-21 21:01:03] -rw-r--r-- 2 boinc boinc    590102 Nov 21 20:50 input.tar.gz
[2025-11-21 21:01:03] -rw-r--r-- 2 boinc boinc     15120 Nov 21 20:50 start_atlas.sh
[2025-11-21 21:01:03] drwxrwx--x 2 boinc boinc      4096 Nov 21 20:50 shared
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc         0 Nov 21 20:50 boinc_setup_complete
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc      6379 Nov 21 20:50 init_data.xml
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc         0 Nov 21 20:50 boinc_lockfile
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc      2773 Nov 21 20:50 pandaJob.out
[2025-11-21 21:01:03] -rw------- 1 boinc boinc    989798 Nov 21 20:50 agis_schedconf.cvmfs.json
[2025-11-21 21:01:03] -rw------- 1 boinc boinc   1526164 Nov 21 20:50 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:01:03] drwx------ 5 boinc boinc      4096 Nov 21 20:50 pilot3
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc       525 Nov 21 20:58 boinc_task_state.xml
[2025-11-21 21:01:03] -rw------- 1 boinc boinc      1003 Nov 21 20:58 memory_monitor_summary.json
[2025-11-21 21:01:03] -rw------- 1 boinc boinc    450684 Nov 21 20:58 log.47493068._002066.job.log.tgz.1
[2025-11-21 21:01:03] -rw------- 1 boinc boinc        95 Nov 21 21:00 pilot_heartbeat.json
[2025-11-21 21:01:03] -rw------- 1 boinc boinc     11512 Nov 21 21:00 heartbeat.json
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc      8192 Nov 21 21:00 boinc_mmap_file
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc        23 Nov 21 21:00 wrapper_checkpoint.txt
[2025-11-21 21:01:03] -rw------- 1 boinc boinc      4750 Nov 21 21:01 pilotlog.txt
[2025-11-21 21:01:03] -rw------- 1 boinc boinc    139649 Nov 21 21:01 log.47493068._002066.job.log.1
[2025-11-21 21:01:03] -rw------- 1 boinc boinc       186 Nov 21 21:01 output.list
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc       620 Nov 21 21:01 runtime_log
[2025-11-21 21:01:03] -rw------- 1 boinc boinc    614400 Nov 21 21:01 result.tar.gz
[2025-11-21 21:01:03] -rw------- 1 boinc boinc       651 Nov 21 21:01 vlyLDmewcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1ZFKDmRHtwsn.diag
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc      8629 Nov 21 21:01 runtime_log.err
[2025-11-21 21:01:03] -rw-r--r-- 1 boinc boinc     22686 Nov 21 21:01 stderr.txt
[2025-11-21 21:01:03] No HITS result produced
[2025-11-21 21:01:03]  *** Contents of shared directory: ***
[2025-11-21 21:01:03] total 399844
[2025-11-21 21:01:03] -rw-r--r-- 2 boinc boinc 408207656 Nov 21 20:50 ATLAS.root_0
[2025-11-21 21:01:03] -rw-r--r-- 2 boinc boinc    590102 Nov 21 20:50 input.tar.gz
[2025-11-21 21:01:03] -rw-r--r-- 2 boinc boinc     15120 Nov 21 20:50 start_atlas.sh
[2025-11-21 21:01:03] -rw------- 1 boinc boinc    614400 Nov 21 21:01 result.tar.gz
21:01:25 (7380): run_atlas exited; CPU time 81.547093
21:01:25 (7380): called boinc_finish(0)

</stderr_txt>
]]>


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