Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:21:48 (214629): wrapper (7.7.26015): starting
07:21:48 (214629): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 07:21:48] Arguments: --nthreads 12
[2025-11-21 07:21:48] Threads: 12
[2025-11-21 07:21:48] Checking for CVMFS
[2025-11-21 07:21:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 07:21:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 07:21:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 07:21:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 07:21:49] 2.11.5.0 2718463 21065 236876 153133 3 58 38530378 45568000 15819 130560 0 131985953 99.783 90715125 20400 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-21 07:21:49] CVMFS is ok
[2025-11-21 07:21:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 07:21:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 07:21:49] Further information can be found at the LHC@home message board.
[2025-11-21 07:21:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 07:21:49] Checking for apptainer binary...
[2025-11-21 07:21:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 07:21:49] Running /usr/bin/apptainer --version
[2025-11-21 07:21:49] apptainer version 1.4.1-1.el9
[2025-11-21 07:21:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 07:21:49] wns0043.triumf.lcg
[2025-11-21 07:21:49] apptainer works
[2025-11-21 07:21:49] Set ATHENA_PROC_NUMBER=12
[2025-11-21 07:21:49] Set ATHENA_CORE_NUMBER=12
[2025-11-21 07:21:49] Starting ATLAS job with PandaID=6894278635
[2025-11-21 07:21:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 07:26:28]  *** The last 200 lines of the pilot log: ***
[2025-11-21 07:26:28] 2025-11-21 15:25:55,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 07:26:28] 2025-11-21 15:25:55,071 | WARNING  | wrong length of table data, x=[1763738554.0, 1763738615.0], y=[1106.0, 670496.0] (must be same and length>=4)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | could have reported an average CPU frequency of 1522 MHz (4 samples)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | ..............................
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | . Timing measurements:
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | . get job = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | . initial setup = 2 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . payload setup = 8 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . stage-in = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . payload execution = 79 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . stage-out = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . log creation = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | ..............................
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894278635/pilotlog.txt
[2025-11-21 07:26:28] 2025-11-21 15:25:55,088 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 07:26:28] - Log from pilotlog.txt -
[2025-11-21 07:26:28] 2025-11-21 15:25:55,068 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894278635/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,069 | INFO     | extracted standard info from prmon json
[2025-11-21 07:26:28] 2025-11-21 15:25:55,070 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 07:26:28] 2025-11-21 15:25:55,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 07:26:28] 2025-11-21 15:25:55,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 07:26:28] 2025-11-21 15:25:55,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 07:26:28] 2025-11-21 15:25:55,071 | WARNING  | wrong length of table data, x=[1763738554.0, 1763738615.0], y=[1106.0, 670496.0] (must be same and length>=4)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | could have reported an average CPU frequency of 1522 MHz (4 samples)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | ..............................
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | . Timing measurements:
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | . get job = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | . initial setup = 2 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . payload setup = 8 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . stage-in = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . payload execution = 79 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . stage-out = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . log creation = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | ..............................
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894278635/pilotlog.txt
[2025-11-21 07:26:28] 2025-11-21 15:25:55,089 | WARNING  | 
[2025-11-21 07:26:28] [begin log extracts]
[2025-11-21 07:26:28] - Log from pilotlog.txt -
[2025-11-21 07:26:28] 2025-11-21 15:25:55,068 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894278635/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,069 | INFO     | extracted standard info from prmon json
[2025-11-21 07:26:28] 2025-11-21 15:25:55,070 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 07:26:28] 2025-11-21 15:25:55,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 07:26:28] 2025-11-21 15:25:55,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 07:26:28] 2025-11-21 15:25:55,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 07:26:28] 2025-11-21 15:25:55,071 | WARNING  | wrong length of table data, x=[1763738554.0, 1763738615.0], y=[1106.0, 670496.0] (must be same and length>=4)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | could have reported an average CPU frequency of 1522 MHz (4 samples)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | ..............................
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | . Timing measurements:
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | . get job = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,072 | INFO     | . initial setup = 2 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . payload setup = 8 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . stage-in = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . payload execution = 79 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . stage-out = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | . log creation = 0 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | ..............................
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 07:26:28] 2025-11-21 15:25:55,073 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894278635/pilotlog.txt
[2025-11-21 07:26:28] [end log extracts]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,089 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,090 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 07:26:28] 2025-11-21 15:25:55,391 | INFO     | 
[2025-11-21 07:26:28] 2025-11-21 15:25:55,391 | INFO     | job summary report
[2025-11-21 07:26:28] 2025-11-21 15:25:55,391 | INFO     | --------------------------------------------------
[2025-11-21 07:26:28] 2025-11-21 15:25:55,391 | INFO     | PanDA job id: 6894278635
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | task id: 47533967
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 07:23:43,023 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | pilot state: failed 
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | transexitcode: 65
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | exeerrorcode: 65
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | exitcode: 65
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-21 07:26:28] 2025-11-21 15:25:55,392 | INFO     | cpuconsumptiontime: 70 s
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | nevents: 0
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | neventsw: 0
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | pid: 225187
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | pgrp: 225187
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | corecount: 12
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | event service: False
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | sizes: {0: 2297978, 1: 2298831, 7: 2299093, 12: 2299121, 91: 2324517, 92: 2328807, 93: 2328963, 216: 2329129}
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | --------------------------------------------------
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | 
[2025-11-21 07:26:28] 2025-11-21 15:25:55,393 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 07:26:28] 2025-11-21 15:25:55,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 07:26:28] 2025-11-21 15:25:55,418 | INFO     | job 6894278635 has completed (purged errors)
[2025-11-21 07:26:28] 2025-11-21 15:25:55,418 | INFO     | overall cleanup function is called
[2025-11-21 07:26:28] 2025-11-21 15:25:56,426 | INFO     | --- collectZombieJob: --- 10, [225187]
[2025-11-21 07:26:28] 2025-11-21 15:25:56,426 | INFO     | zombie collector waiting for pid 225187
[2025-11-21 07:26:28] 2025-11-21 15:25:56,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 07:26:28] 2025-11-21 15:25:56,426 | INFO     | collected zombie processes
[2025-11-21 07:26:28] 2025-11-21 15:25:56,427 | INFO     | will attempt to kill all subprocesses of pid=225187
[2025-11-21 07:26:28] 2025-11-21 15:25:56,767 | INFO     | process IDs to be killed: [225187] (in reverse order)
[2025-11-21 07:26:28] 2025-11-21 15:25:56,886 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 07:26:28] 2025-11-21 15:25:56,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 07:26:28] 2025-11-21 15:25:56,898 | INFO     | did not find any defunct processes belonging to 225187
[2025-11-21 07:26:28] 2025-11-21 15:25:56,909 | INFO     | did not find any defunct processes belonging to 225187
[2025-11-21 07:26:28] 2025-11-21 15:25:56,911 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 07:26:28] 2025-11-21 15:25:56,911 | INFO     | ready for new job
[2025-11-21 07:26:28] 2025-11-21 15:25:56,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 07:26:28] 2025-11-21 15:25:56,913 | INFO     | ***************************************
[2025-11-21 07:26:28] 2025-11-21 15:25:56,913 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 07:26:28] 2025-11-21 15:25:56,913 | INFO     | ***************************************
[2025-11-21 07:26:28] 2025-11-21 15:25:56,913 | INFO     | 
[2025-11-21 07:26:28] 2025-11-21 15:25:56,917 | INFO     | architecture information:
[2025-11-21 07:26:28] 2025-11-21 15:25:56,917 | INFO     | executing command: cat /etc/os-release
[2025-11-21 07:26:28] 2025-11-21 15:25:56,932 | INFO     | cat /etc/os-release:
[2025-11-21 07:26:28] NAME="CentOS Linux"
[2025-11-21 07:26:28] VERSION="7 (Core)"
[2025-11-21 07:26:28] ID="centos"
[2025-11-21 07:26:28] ID_LIKE="rhel fedora"
[2025-11-21 07:26:28] VERSION_ID="7"
[2025-11-21 07:26:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 07:26:28] ANSI_COLOR="0;31"
[2025-11-21 07:26:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 07:26:28] HOME_URL="https://www.centos.org/"
[2025-11-21 07:26:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 07:26:28] 
[2025-11-21 07:26:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 07:26:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 07:26:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 07:26:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 07:26:28] 
[2025-11-21 07:26:28] 2025-11-21 15:25:56,932 | INFO     | ***************************************
[2025-11-21 07:26:28] 2025-11-21 15:25:57,435 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 07:26:28] 2025-11-21 15:25:57,452 | INFO     | sufficient remaining disk space (1981752016896 B)
[2025-11-21 07:26:28] 2025-11-21 15:25:57,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 07:26:28] 2025-11-21 15:25:57,452 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 07:26:28] 2025-11-21 15:25:57,453 | INFO     | update_server=False
[2025-11-21 07:26:28] 2025-11-21 15:25:57,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 07:26:28] 2025-11-21 15:25:57,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 07:26:28] 2025-11-21 15:25:57,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 07:26:28] 2025-11-21 15:25:57,548 | INFO     | aborting loop
[2025-11-21 07:26:28] 2025-11-21 15:25:57,579 | INFO     | all job control threads have been joined
[2025-11-21 07:26:28] 2025-11-21 15:25:58,300 | INFO     | all data control threads have been joined
[2025-11-21 07:26:28] 2025-11-21 15:25:58,458 | INFO     | [job] retrieve thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:58,522 | INFO     | all payload control threads have been joined
[2025-11-21 07:26:28] 2025-11-21 15:25:58,553 | INFO     | [job] job monitor thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:58,584 | INFO     | [job] control thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:58,688 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:58,976 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:59,305 | INFO     | [data] control thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:59,458 | INFO     | [data] copytool_out thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:59,507 | INFO     | [job] validate thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:59,528 | INFO     | [payload] control thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:59,631 | INFO     | [payload] failed_post thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:59,747 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:59,762 | INFO     | [data] copytool_in thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:25:59,917 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:26:00,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 07:26:28] 2025-11-21 15:26:00,048 | INFO     | [payload] validate_post thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:26:00,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 07:26:28] 2025-11-21 15:26:01,198 | INFO     | [job] queue monitor thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:26:02,170 | INFO     | [monitor] cgroup control has ended
[2025-11-21 07:26:28] 2025-11-21 15:26:04,048 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 07:26:28] 2025-11-21 15:26:05,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284561471296)>', '<ExcThread(monitor, started 140283882755840)>']
[2025-11-21 07:26:28] 2025-11-21 15:26:10,785 | INFO     | all workflow threads have been joined
[2025-11-21 07:26:28] 2025-11-21 15:26:10,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 07:26:28] 2025-11-21 15:26:10,786 | INFO     | traces error code: 0
[2025-11-21 07:26:28] 2025-11-21 15:26:10,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 07:26:28] 2025-11-21 15:26:27,834 | INFO     | PID=218331 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 07:26:28] 2025-11-21 15:26:27,834 | INFO     | .. there are 28 such processes running
[2025-11-21 07:26:28] 2025-11-21 15:26:27,835 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 07:26:28] 2025-11-21 15:26:27,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 07:26:28] 2025-11-21 15:26:27,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 07:26:28] 2025-11-21 15:26:27,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 07:26:28] 2025-11-21 15:26:27,835 | INFO     | [monitor] control thread has ended
[2025-11-21 07:26:28] 2025-11-21 15:26:27,975 [wrapper] ==== pilot stdout END ====
[2025-11-21 07:26:28] 2025-11-21 15:26:27,978 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 07:26:28] 2025-11-21 15:26:27,982 [wrapper] pilotpid: 218331
[2025-11-21 07:26:28] 2025-11-21 15:26:27,985 [wrapper] Pilot exit status: 0
[2025-11-21 07:26:28] 2025-11-21 15:26:27,997 [wrapper] pandaids: 6894278635
[2025-11-21 07:26:28] 2025-11-21 15:26:28,072 [wrapper] cleanup supervisor_pilot  218337 218332
[2025-11-21 07:26:28] 2025-11-21 15:26:28,075 [wrapper] Test setup, not cleaning
[2025-11-21 07:26:28] 2025-11-21 15:26:28,079 [wrapper] apfmon messages muted
[2025-11-21 07:26:28] 2025-11-21 15:26:28,082 [wrapper] ==== wrapper stdout END ====
[2025-11-21 07:26:28] 2025-11-21 15:26:28,085 [wrapper] ==== wrapper stderr END ====
[2025-11-21 07:26:28]  *** Error codes and diagnostics ***
[2025-11-21 07:26:28]     "exeErrorCode": 65,
[2025-11-21 07:26:28]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-21 07:26:28]     "pilotErrorCode": 1305,
[2025-11-21 07:26:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-21 07:26:28]  *** Listing of results directory ***
[2025-11-21 07:26:28] total 402036
[2025-11-21 07:26:28] -rwx------. 1 boinc boinc     36292 Nov 21 00:27 runpilot2-wrapper.sh
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc    576529 Nov 21 00:27 pilot3.tar.gz
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc      5112 Nov 21 00:27 queuedata.json
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc       100 Nov 21 07:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 07:26:28] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 07:21 run_atlas
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc       105 Nov 21 07:21 job.xml
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc      6595 Nov 21 07:21 init_data.xml
[2025-11-21 07:26:28] -rw-r--r--. 2 boinc boinc 407485891 Nov 21 07:21 EVNT.47493127._002324.pool.root.1
[2025-11-21 07:26:28] -rw-r--r--. 2 boinc boinc     15847 Nov 21 07:21 start_atlas.sh
[2025-11-21 07:26:28] drwxrwx--x. 2 boinc boinc      4096 Nov 21 07:21 shared
[2025-11-21 07:26:28] -rw-r--r--. 2 boinc boinc    590095 Nov 21 07:21 input.tar.gz
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc         0 Nov 21 07:21 boinc_lockfile
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc      2785 Nov 21 07:21 pandaJob.out
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc    989798 Nov 21 07:21 agis_schedconf.cvmfs.json
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc   1526164 Nov 21 07:22 agis_ddmendpoints.agis.ALL.json
[2025-11-21 07:26:28] drwx------. 5 boinc boinc      4096 Nov 21 07:22 pilot3
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc       524 Nov 21 07:23 boinc_task_state.xml
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc      1007 Nov 21 07:23 memory_monitor_summary.json
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc     47681 Nov 21 07:23 log.47533967._002955.job.log.tgz.1
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc     10335 Nov 21 07:25 heartbeat.json
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc      8192 Nov 21 07:26 boinc_mmap_file
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc        23 Nov 21 07:26 wrapper_checkpoint.txt
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc        95 Nov 21 07:26 pilot_heartbeat.json
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc       822 Nov 21 07:26 pilotlog.txt
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc     96831 Nov 21 07:26 log.47533967._002955.job.log.1
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc       186 Nov 21 07:26 output.list
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc       620 Nov 21 07:26 runtime_log
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc    163840 Nov 21 07:26 result.tar.gz
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc      8636 Nov 21 07:26 runtime_log.err
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc       646 Nov 21 07:26 bIpMDm9ebg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPDJKDmE2QFon.diag
[2025-11-21 07:26:28] -rw-r--r--. 1 boinc boinc     22464 Nov 21 07:26 stderr.txt
[2025-11-21 07:26:28] No HITS result produced
[2025-11-21 07:26:28]  *** Contents of shared directory: ***
[2025-11-21 07:26:28] total 398696
[2025-11-21 07:26:28] -rw-r--r--. 2 boinc boinc 407485891 Nov 21 07:21 ATLAS.root_0
[2025-11-21 07:26:28] -rw-r--r--. 2 boinc boinc     15847 Nov 21 07:21 start_atlas.sh
[2025-11-21 07:26:28] -rw-r--r--. 2 boinc boinc    590095 Nov 21 07:21 input.tar.gz
[2025-11-21 07:26:28] -rw-------. 1 boinc boinc    163840 Nov 21 07:26 result.tar.gz
07:26:30 (214629): run_atlas exited; CPU time 66.524030
07:26:30 (214629): called boinc_finish(0)

</stderr_txt>
]]>

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