Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:03 (3503926): wrapper (7.7.26015): starting
10:31:03 (3503926): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 10:31:03] Arguments: --nthreads 9
[2025-11-21 10:31:03] Threads: 9
[2025-11-21 10:31:03] Checking for CVMFS
[2025-11-21 10:31:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 10:31:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 10:31:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 10:31:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 10:31:04] 2.13.2.0 6023 27393 248908 153133 3 194 21386479 40960001 6645 16776704 0 59085716 99.592 58858548 35690 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 10:31:04] CVMFS is ok
[2025-11-21 10:31:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 10:31:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 10:31:04] Further information can be found at the LHC@home message board.
[2025-11-21 10:31:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 10:31:04] Checking for apptainer binary...
[2025-11-21 10:31:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 10:31:04] Running /usr/bin/apptainer --version
[2025-11-21 10:31:04] apptainer version 1.4.4-1.el9
[2025-11-21 10:31:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 10:31:04] c-210-33-4.aglt2.org
[2025-11-21 10:31:04] apptainer works
[2025-11-21 10:31:04] Set ATHENA_PROC_NUMBER=9
[2025-11-21 10:31:04] Set ATHENA_CORE_NUMBER=9
[2025-11-21 10:31:04] Starting ATLAS job with PandaID=6893849659
[2025-11-21 10:31:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 21:36:37]  *** The last 200 lines of the pilot log: ***
[2025-11-22 21:36:37] 2025-11-23 02:35:47,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:36:37] 2025-11-23 02:35:49,618 | INFO     | time since job start (126271s) is within the limit (172800.0s)
[2025-11-22 21:36:37] 2025-11-23 02:35:50,133 | INFO     | monitor loop #6623: job 0:6893849659 is in state 'finished'
[2025-11-22 21:36:37] 2025-11-23 02:35:50,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:36:37] 2025-11-23 02:35:51,628 | INFO     | time since job start (126273s) is within the limit (172800.0s)
[2025-11-22 21:36:37] 2025-11-23 02:35:52,640 | INFO     | monitor loop #6624: job 0:6893849659 is in state 'finished'
[2025-11-22 21:36:37] 2025-11-23 02:35:52,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:36:37] 2025-11-23 02:35:53,635 | INFO     | time since job start (126275s) is within the limit (172800.0s)
[2025-11-22 21:36:37] 2025-11-23 02:35:55,145 | INFO     | monitor loop #6625: job 0:6893849659 is in state 'finished'
[2025-11-22 21:36:37] 2025-11-23 02:35:55,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:36:37] 2025-11-23 02:35:55,644 | INFO     | time since job start (126277s) is within the limit (172800.0s)
[2025-11-22 21:36:37] 2025-11-23 02:35:57,650 | INFO     | time since job start (126279s) is within the limit (172800.0s)
[2025-11-22 21:36:37] 2025-11-23 02:35:57,652 | INFO     | monitor loop #6626: job 0:6893849659 is in state 'finished'
[2025-11-22 21:36:37] 2025-11-23 02:35:57,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:36:37] 2025-11-23 02:35:59,421 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 21:36:37] 2025-11-23 02:35:59,453 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2730.313535714286
[2025-11-22 21:36:37] 2025-11-23 02:35:59,519 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6893849659/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 21:36:37] 2025-11-23 02:35:59,519 | INFO     | extracted standard info from prmon json
[2025-11-22 21:36:37] 2025-11-23 02:35:59,519 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 21:36:37] 2025-11-23 02:35:59,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 21:36:37] 2025-11-23 02:35:59,663 | INFO     | fitting pss+swap vs Time
[2025-11-22 21:36:37] 2025-11-23 02:35:59,666 | INFO     | sum of square deviations: 2746293411487.5083
[2025-11-22 21:36:37] 2025-11-23 02:35:59,698 | INFO     | time since job start (126281s) is within the limit (172800.0s)
[2025-11-22 21:36:37] 2025-11-23 02:35:59,920 | INFO     | sum of deviations: -909890135379.8837
[2025-11-22 21:36:37] 2025-11-23 02:35:59,920 | INFO     | mean x: 1763802191.0865152
[2025-11-22 21:36:37] 2025-11-23 02:35:59,920 | INFO     | mean y: 3088902.1836636057
[2025-11-22 21:36:37] 2025-11-23 02:35:59,920 | INFO     | intersect: 587464267.072946
[2025-11-22 21:36:37] 2025-11-23 02:35:59,923 | INFO     | chi2: 44.088853713039256
[2025-11-22 21:36:37] 2025-11-23 02:35:59,929 | INFO     | sum of square deviations: 2726435073515.811
[2025-11-22 21:36:37] 2025-11-23 02:36:00,090 | INFO     | sum of deviations: -155299622271.97815
[2025-11-22 21:36:37] 2025-11-23 02:36:00,090 | INFO     | mean x: 1763802038.6036823
[2025-11-22 21:36:37] 2025-11-23 02:36:00,090 | INFO     | mean y: 3094695.8129844964
[2025-11-22 21:36:37] 2025-11-23 02:36:00,090 | INFO     | intersect: 103562076.46638569
[2025-11-22 21:36:37] 2025-11-23 02:36:00,094 | INFO     | chi2: 40.5387654583931
[2025-11-22 21:36:37] 2025-11-23 02:36:00,095 | INFO     | current chi2=40.5387654583931 (change=8.052121921228855 %)
[2025-11-22 21:36:37] 2025-11-23 02:36:00,095 | INFO     | right removable region: 2063
[2025-11-22 21:36:37] 2025-11-23 02:36:00,097 | INFO     | sum of square deviations: 2726426255674.0127
[2025-11-22 21:36:37] 2025-11-23 02:36:00,297 | INFO     | monitor loop #6627: job 0:6893849659 is in state 'finished'
[2025-11-22 21:36:37] 2025-11-23 02:36:00,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:36:37] 2025-11-23 02:36:00,408 | INFO     | sum of deviations: -1508006414032.5889
[2025-11-22 21:36:37] 2025-11-23 02:36:00,408 | INFO     | mean x: 1763802343.6031976
[2025-11-22 21:36:37] 2025-11-23 02:36:00,409 | INFO     | mean y: 3093490.9675387596
[2025-11-22 21:36:37] 2025-11-23 02:36:00,409 | INFO     | intersect: 978665539.4335209
[2025-11-22 21:36:37] 2025-11-23 02:36:00,411 | INFO     | chi2: 41.98849400979155
[2025-11-22 21:36:37] 2025-11-23 02:36:00,411 | INFO     | current chi2=41.98849400979155 (change=4.763924498736795 %)
[2025-11-22 21:36:37] 2025-11-23 02:36:00,412 | INFO     | left removable region: 10
[2025-11-22 21:36:37] 2025-11-23 02:36:00,434 | INFO     | sum of square deviations: 2683067195015.437
[2025-11-22 21:36:37] 2025-11-23 02:36:00,535 | INFO     | sum of deviations: -745198062290.6024
[2025-11-22 21:36:37] 2025-11-23 02:36:00,535 | INFO     | mean x: 1763802313.1388211
[2025-11-22 21:36:37] 2025-11-23 02:36:00,535 | INFO     | mean y: 3101468.4617632735
[2025-11-22 21:36:37] 2025-11-23 02:36:00,535 | INFO     | intersect: 492981881.6159964
[2025-11-22 21:36:37] 2025-11-23 02:36:00,538 | INFO     | chi2: 37.726518026090766
[2025-11-22 21:36:37] 2025-11-23 02:36:00,538 | INFO     | current memory leak: -0.28 B/s (using 2053 data points, chi2=37.73)
[2025-11-22 21:36:37] 2025-11-23 02:36:00,540 | INFO     | could have reported an average CPU frequency of 2760 MHz (71 samples)
[2025-11-22 21:36:37] 2025-11-23 02:36:00,540 | INFO     | ..............................
[2025-11-22 21:36:37] 2025-11-23 02:36:00,540 | INFO     | . Timing measurements:
[2025-11-22 21:36:37] 2025-11-23 02:36:00,541 | INFO     | . get job = 0 s
[2025-11-22 21:36:37] 2025-11-23 02:36:00,541 | INFO     | . initial setup = 2 s
[2025-11-22 21:36:37] 2025-11-23 02:36:00,541 | INFO     | . payload setup = 7 s
[2025-11-22 21:36:37] 2025-11-23 02:36:00,541 | INFO     | . stage-in = 0 s
[2025-11-22 21:36:37] 2025-11-23 02:36:00,541 | INFO     | . payload execution = 126198 s
[2025-11-22 21:36:37] 2025-11-23 02:36:00,541 | INFO     | . stage-out = 12 s
[2025-11-22 21:36:37] 2025-11-23 02:36:00,541 | INFO     | . log creation = 3 s
[2025-11-22 21:36:37] 2025-11-23 02:36:00,542 | INFO     | ..............................
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | 
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | job summary report
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | --------------------------------------------------
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | PanDA job id: 6893849659
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | task id: 47523449
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | errors: (none)
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | pilot state: finished 
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | transexitcode: 0
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | exeerrorcode: 0
[2025-11-22 21:36:37] 2025-11-23 02:36:00,957 | INFO     | exeerrordiag: 
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | exitcode: 0
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | exitmsg: OK
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | cpuconsumptiontime: 253649 s
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | nevents: 1000
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | neventsw: 0
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | pid: 3514018
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | pgrp: 3514018
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | corecount: 9
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | event service: False
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | sizes: {0: 2297979, 1: 2298835, 7: 2299097, 12: 2299125, 126210: 2380461, 126211: 2380460, 126224: 2389638, 126225: 2389694, 126266: 2389940}
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | --------------------------------------------------
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | 
[2025-11-22 21:36:37] 2025-11-23 02:36:00,958 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-22 21:36:37] 2025-11-23 02:36:01,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 21:36:37] 2025-11-23 02:36:01,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 21:36:37] 2025-11-23 02:36:01,030 | INFO     | job 6893849659 has completed (purged errors)
[2025-11-22 21:36:37] 2025-11-23 02:36:01,030 | INFO     | overall cleanup function is called
[2025-11-22 21:36:37] 2025-11-23 02:36:02,063 | INFO     | --- collectZombieJob: --- 10, [3514018]
[2025-11-22 21:36:37] 2025-11-23 02:36:02,063 | INFO     | zombie collector waiting for pid 3514018
[2025-11-22 21:36:37] 2025-11-23 02:36:02,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 21:36:37] 2025-11-23 02:36:02,063 | INFO     | collected zombie processes
[2025-11-22 21:36:37] 2025-11-23 02:36:02,063 | INFO     | will attempt to kill all subprocesses of pid=3514018
[2025-11-22 21:36:37] 2025-11-23 02:36:02,997 | INFO     | process IDs to be killed: [3514018] (in reverse order)
[2025-11-22 21:36:37] 2025-11-23 02:36:03,558 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 21:36:37] 2025-11-23 02:36:03,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 21:36:37] 2025-11-23 02:36:03,632 | INFO     | did not find any defunct processes belonging to 3514018
[2025-11-22 21:36:37] 2025-11-23 02:36:03,678 | INFO     | did not find any defunct processes belonging to 3514018
[2025-11-22 21:36:37] 2025-11-23 02:36:03,688 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 21:36:37] 2025-11-23 02:36:03,688 | INFO     | ready for new job
[2025-11-22 21:36:37] 2025-11-23 02:36:03,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 21:36:37] 2025-11-23 02:36:03,773 | INFO     | ***************************************
[2025-11-22 21:36:37] 2025-11-23 02:36:03,774 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 21:36:37] 2025-11-23 02:36:03,774 | INFO     | ***************************************
[2025-11-22 21:36:37] 2025-11-23 02:36:03,774 | INFO     | 
[2025-11-22 21:36:37] 2025-11-23 02:36:03,816 | INFO     | architecture information:
[2025-11-22 21:36:37] 2025-11-23 02:36:03,839 | INFO     | executing command: cat /etc/os-release
[2025-11-22 21:36:37] 2025-11-23 02:36:03,906 | INFO     | cat /etc/os-release:
[2025-11-22 21:36:37] NAME="CentOS Linux"
[2025-11-22 21:36:37] VERSION="7 (Core)"
[2025-11-22 21:36:37] ID="centos"
[2025-11-22 21:36:37] ID_LIKE="rhel fedora"
[2025-11-22 21:36:37] VERSION_ID="7"
[2025-11-22 21:36:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 21:36:37] ANSI_COLOR="0;31"
[2025-11-22 21:36:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 21:36:37] HOME_URL="https://www.centos.org/"
[2025-11-22 21:36:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 21:36:37] 
[2025-11-22 21:36:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 21:36:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 21:36:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 21:36:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 21:36:37] 
[2025-11-22 21:36:37] 2025-11-23 02:36:03,907 | INFO     | ***************************************
[2025-11-22 21:36:37] 2025-11-23 02:36:04,411 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-22 21:36:37] 2025-11-23 02:36:04,450 | INFO     | sufficient remaining disk space (67237838848 B)
[2025-11-22 21:36:37] 2025-11-23 02:36:04,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 21:36:37] 2025-11-23 02:36:04,450 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 21:36:37] 2025-11-23 02:36:04,450 | INFO     | update_server=False
[2025-11-22 21:36:37] 2025-11-23 02:36:04,450 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 21:36:37] 2025-11-23 02:36:04,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:36:37] 2025-11-23 02:36:04,451 | INFO     | aborting loop
[2025-11-22 21:36:37] 2025-11-23 02:36:04,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 21:36:37] 2025-11-23 02:36:04,545 | INFO     | all payload control threads have been joined
[2025-11-22 21:36:37] 2025-11-23 02:36:04,937 | INFO     | all data control threads have been joined
[2025-11-22 21:36:37] 2025-11-23 02:36:05,001 | INFO     | all job control threads have been joined
[2025-11-22 21:36:37] 2025-11-23 02:36:05,456 | INFO     | [job] retrieve thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:05,462 | INFO     | [job] job monitor thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:05,551 | INFO     | [payload] control thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:05,752 | INFO     | [job] validate thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:05,764 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:05,943 | INFO     | [data] control thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:05,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:36:37] 2025-11-23 02:36:06,007 | INFO     | [job] control thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:06,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:06,391 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:06,475 | INFO     | [data] copytool_out thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:06,714 | INFO     | [data] copytool_in thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:06,766 | INFO     | [payload] failed_post thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:06,872 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:06,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 21:36:37] 2025-11-23 02:36:06,910 | INFO     | [payload] validate_post thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:06,996 | INFO     | [job] queue monitor thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:10,925 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 21:36:37] 2025-11-23 02:36:23,895 | INFO     | [monitor] cgroup control has ended
[2025-11-22 21:36:37] 2025-11-23 02:36:24,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889842308928)>', '<ExcThread(monitor, started 139889332958976)>']
[2025-11-22 21:36:37] 2025-11-23 02:36:29,705 | INFO     | all workflow threads have been joined
[2025-11-22 21:36:37] 2025-11-23 02:36:29,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 21:36:37] 2025-11-23 02:36:29,706 | INFO     | traces error code: 0
[2025-11-22 21:36:37] 2025-11-23 02:36:29,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 21:36:37] 2025-11-23 02:36:34,899 | INFO     | PID=3507646 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 21:36:37] 2025-11-23 02:36:34,903 | INFO     | .. there are 20 such processes running
[2025-11-22 21:36:37] 2025-11-23 02:36:34,904 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 21:36:37] 2025-11-23 02:36:34,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 21:36:37] 2025-11-23 02:36:34,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 21:36:37] 2025-11-23 02:36:34,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 21:36:37] 2025-11-23 02:36:34,904 | INFO     | [monitor] control thread has ended
[2025-11-22 21:36:37] 2025-11-23 02:36:35,343 [wrapper] ==== pilot stdout END ====
[2025-11-22 21:36:37] 2025-11-23 02:36:35,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 21:36:37] 2025-11-23 02:36:35,397 [wrapper] pilotpid: 3507646
[2025-11-22 21:36:37] 2025-11-23 02:36:35,428 [wrapper] Pilot exit status: 0
[2025-11-22 21:36:37] 2025-11-23 02:36:35,513 [wrapper] pandaids: 6893849659
[2025-11-22 21:36:37] 2025-11-23 02:36:35,816 [wrapper] cleanup supervisor_pilot 3965278 3507647
[2025-11-22 21:36:37] 2025-11-23 02:36:35,847 [wrapper] Test setup, not cleaning
[2025-11-22 21:36:37] 2025-11-23 02:36:35,893 [wrapper] apfmon messages muted
[2025-11-22 21:36:37] 2025-11-23 02:36:35,988 [wrapper] ==== wrapper stdout END ====
[2025-11-22 21:36:37] 2025-11-23 02:36:36,027 [wrapper] ==== wrapper stderr END ====
[2025-11-22 21:36:37]  *** Error codes and diagnostics ***
[2025-11-22 21:36:37]     "exeErrorCode": 0,
[2025-11-22 21:36:37]     "exeErrorDiag": "",
[2025-11-22 21:36:37]     "pilotErrorCode": 0,
[2025-11-22 21:36:37]     "pilotErrorDiag": "",
[2025-11-22 21:36:37]  *** Listing of results directory ***
[2025-11-22 21:36:37] total 1338936
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:57 pilot3.tar.gz
[2025-11-22 21:36:37] -rwx------. 1 boincer umatlas     36292 Nov 20 06:00 runpilot2-wrapper.sh
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:00 queuedata.json
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas       100 Nov 21 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 21:36:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 10:31 run_atlas
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas       105 Nov 21 10:31 job.xml
[2025-11-22 21:36:37] -rw-r--r--. 2 boincer umatlas 408053020 Nov 21 10:31 EVNT.47493127._000297.pool.root.1
[2025-11-22 21:36:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 10:31 start_atlas.sh
[2025-11-22 21:36:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 10:31 shared
[2025-11-22 21:36:37] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 10:31 input.tar.gz
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas         0 Nov 21 10:31 boinc_lockfile
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 10:31 pandaJob.out
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas        57 Nov 21 10:31 setup.sh.local
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas    989798 Nov 21 10:31 agis_schedconf.cvmfs.json
[2025-11-22 21:36:37] drwx------. 5 boincer umatlas      4096 Nov 21 10:31 pilot3
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas       533 Nov 22 20:27 boinc_task_state.xml
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas 923997956 Nov 22 21:33 HITS.47523449._002966.pool.root.1
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas      1061 Nov 22 21:35 memory_monitor_summary.json
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas   1526164 Nov 22 21:35 agis_ddmendpoints.agis.ALL.json
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas   2901918 Nov 22 21:35 log.47523449._002966.job.log.tgz.1
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas        95 Nov 22 21:35 pilot_heartbeat.json
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas      8626 Nov 22 21:36 heartbeat.json
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas      6845 Nov 22 21:36 init_data.xml
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas        29 Nov 22 21:36 wrapper_checkpoint.txt
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas       823 Nov 22 21:36 pilotlog.txt
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 21:36 boinc_mmap_file
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas  14647201 Nov 22 21:36 log.47523449._002966.job.log.1
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas       353 Nov 22 21:36 output.list
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas       620 Nov 22 21:36 runtime_log
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas  17571840 Nov 22 21:36 result.tar.gz
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas       665 Nov 22 21:36 TCTKDmdZHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLUGKDmXIxIZn.diag
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas      9354 Nov 22 21:36 runtime_log.err
[2025-11-22 21:36:37] -rw-r--r--. 1 boincer umatlas     21759 Nov 22 21:36 stderr.txt
[2025-11-22 21:36:37] HITS file was successfully produced:
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas 923997956 Nov 22 21:33 shared/HITS.pool.root.1
[2025-11-22 21:36:37]  *** Contents of shared directory: ***
[2025-11-22 21:36:37] total 1318596
[2025-11-22 21:36:37] -rw-r--r--. 2 boincer umatlas 408053020 Nov 21 10:31 ATLAS.root_0
[2025-11-22 21:36:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 10:31 start_atlas.sh
[2025-11-22 21:36:37] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 10:31 input.tar.gz
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas 923997956 Nov 22 21:33 HITS.pool.root.1
[2025-11-22 21:36:37] -rw-------. 1 boincer umatlas  17571840 Nov 22 21:36 result.tar.gz
21:36:38 (3503926): run_atlas exited; CPU time 255920.994889
21:36:38 (3503926): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN