Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:18:00 (2704314): wrapper (7.7.26015): starting
10:18:00 (2704314): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 10:18:00] Arguments: --nthreads 8
[2025-11-21 10:18:00] Threads: 8
[2025-11-21 10:18:00] Checking for CVMFS
[2025-11-21 10:18:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 10:18:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 10:18:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 10:18:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 10:18:01] 2.13.2.0 6384 27408 223928 153133 1 67 27234069 40960001 7596 16776704 0 24103725 99.763 11823868 30364 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 10:18:01] CVMFS is ok
[2025-11-21 10:18:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 10:18:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 10:18:01] Further information can be found at the LHC@home message board.
[2025-11-21 10:18:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 10:18:01] Checking for apptainer binary...
[2025-11-21 10:18:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 10:18:01] Running /usr/bin/apptainer --version
[2025-11-21 10:18:01] apptainer version 1.4.4-1.el9
[2025-11-21 10:18:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 10:18:02] c-210-33-2.aglt2.org
[2025-11-21 10:18:02] apptainer works
[2025-11-21 10:18:02] Set ATHENA_PROC_NUMBER=8
[2025-11-21 10:18:02] Set ATHENA_CORE_NUMBER=8
[2025-11-21 10:18:02] Starting ATLAS job with PandaID=6893848464
[2025-11-21 10:18:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 04:36:37]  *** The last 200 lines of the pilot log: ***
[2025-11-22 04:36:37] 2025-11-22 09:35:18,879 | INFO     | monitor loop #4296: job 0:6893848464 is in state 'finished'
[2025-11-22 04:36:37] 2025-11-22 09:35:18,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:36:37] 2025-11-22 09:35:19,845 | INFO     | time since job start (65806s) is within the limit (172800.0s)
[2025-11-22 04:36:37] 2025-11-22 09:35:21,386 | INFO     | monitor loop #4297: job 0:6893848464 is in state 'finished'
[2025-11-22 04:36:37] 2025-11-22 09:35:21,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:36:37] 2025-11-22 09:35:21,852 | INFO     | time since job start (65808s) is within the limit (172800.0s)
[2025-11-22 04:36:37] 2025-11-22 09:35:23,564 | INFO     | PID=2710361 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 04:36:37] 2025-11-22 09:35:23,564 | INFO     | .. there are 13 such processes running
[2025-11-22 04:36:37] 2025-11-22 09:35:23,909 | INFO     | monitor loop #4298: job 0:6893848464 is in state 'finished'
[2025-11-22 04:36:37] 2025-11-22 09:35:23,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:36:37] 2025-11-22 09:35:24,566 | INFO     | time since job start (65811s) is within the limit (172800.0s)
[2025-11-22 04:36:37] 2025-11-22 09:35:26,417 | INFO     | monitor loop #4299: job 0:6893848464 is in state 'finished'
[2025-11-22 04:36:37] 2025-11-22 09:35:26,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:36:37] 2025-11-22 09:35:26,573 | INFO     | time since job start (65813s) is within the limit (172800.0s)
[2025-11-22 04:36:37] 2025-11-22 09:35:28,581 | INFO     | time since job start (65815s) is within the limit (172800.0s)
[2025-11-22 04:36:37] 2025-11-22 09:35:28,925 | INFO     | monitor loop #4300: job 0:6893848464 is in state 'finished'
[2025-11-22 04:36:37] 2025-11-22 09:35:28,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:36:37] 2025-11-22 09:35:29,876 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 04:36:37] 2025-11-22 09:35:29,879 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2869.095375
[2025-11-22 04:36:37] 2025-11-22 09:35:29,896 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893848464/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 04:36:37] 2025-11-22 09:35:29,900 | INFO     | extracted standard info from prmon json
[2025-11-22 04:36:37] 2025-11-22 09:35:29,901 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 04:36:37] 2025-11-22 09:35:29,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 04:36:37] 2025-11-22 09:35:29,933 | INFO     | fitting pss+swap vs Time
[2025-11-22 04:36:37] 2025-11-22 09:35:29,934 | INFO     | sum of square deviations: 388497153821.1025
[2025-11-22 04:36:37] 2025-11-22 09:35:29,974 | INFO     | sum of deviations: 963766811056.8591
[2025-11-22 04:36:37] 2025-11-22 09:35:29,974 | INFO     | mean x: 1763771240.2040815
[2025-11-22 04:36:37] 2025-11-22 09:35:29,974 | INFO     | mean y: 2873637.6233766233
[2025-11-22 04:36:37] 2025-11-22 09:35:29,975 | INFO     | intersect: -4372613201.5622015
[2025-11-22 04:36:37] 2025-11-22 09:35:29,976 | INFO     | chi2: 16.208720443420066
[2025-11-22 04:36:37] 2025-11-22 09:35:29,977 | INFO     | sum of square deviations: 383118261439.6808
[2025-11-22 04:36:37] 2025-11-22 09:35:30,018 | INFO     | sum of deviations: 1330567458659.0327
[2025-11-22 04:36:37] 2025-11-22 09:35:30,019 | INFO     | mean x: 1763771087.721342
[2025-11-22 04:36:37] 2025-11-22 09:35:30,019 | INFO     | mean y: 2884033.4482758623
[2025-11-22 04:36:37] 2025-11-22 09:35:30,019 | INFO     | intersect: -6122682534.500752
[2025-11-22 04:36:37] 2025-11-22 09:35:30,020 | INFO     | chi2: 12.83169359308956
[2025-11-22 04:36:37] 2025-11-22 09:35:30,020 | INFO     | current chi2=12.83169359308956 (change=20.834629495392477 %)
[2025-11-22 04:36:37] 2025-11-22 09:35:30,020 | INFO     | right removable region: 1072
[2025-11-22 04:36:37] 2025-11-22 09:35:30,025 | INFO     | sum of square deviations: 383115825709.68097
[2025-11-22 04:36:37] 2025-11-22 09:35:30,060 | INFO     | sum of deviations: 582627326770.8787
[2025-11-22 04:36:37] 2025-11-22 09:35:30,065 | INFO     | mean x: 1763771392.721342
[2025-11-22 04:36:37] 2025-11-22 09:35:30,065 | INFO     | mean y: 2884434.6383970175
[2025-11-22 04:36:37] 2025-11-22 09:35:30,065 | INFO     | intersect: -2679389025.8030415
[2025-11-22 04:36:37] 2025-11-22 09:35:30,066 | INFO     | chi2: 12.982876734699056
[2025-11-22 04:36:37] 2025-11-22 09:35:30,067 | INFO     | current chi2=12.982876734699056 (change=19.90190231228611 %)
[2025-11-22 04:36:37] 2025-11-22 09:35:30,067 | INFO     | left removable region: 10
[2025-11-22 04:36:37] 2025-11-22 09:35:30,068 | INFO     | sum of square deviations: 371455435272.33514
[2025-11-22 04:36:37] 2025-11-22 09:35:30,107 | INFO     | sum of deviations: 929413250532.9619
[2025-11-22 04:36:37] 2025-11-22 09:35:30,107 | INFO     | mean x: 1763771362.2561204
[2025-11-22 04:36:37] 2025-11-22 09:35:30,107 | INFO     | mean y: 2900049.5442561205
[2025-11-22 04:36:37] 2025-11-22 09:35:30,107 | INFO     | intersect: -4410206663.484635
[2025-11-22 04:36:37] 2025-11-22 09:35:30,108 | INFO     | chi2: 8.553532218750359
[2025-11-22 04:36:37] 2025-11-22 09:35:30,109 | INFO     | current memory leak: 2.50 B/s (using 1062 data points, chi2=8.55)
[2025-11-22 04:36:37] 2025-11-22 09:35:30,114 | INFO     | could have reported an average CPU frequency of 2927 MHz (39 samples)
[2025-11-22 04:36:37] 2025-11-22 09:35:30,114 | INFO     | ..............................
[2025-11-22 04:36:37] 2025-11-22 09:35:30,114 | INFO     | . Timing measurements:
[2025-11-22 04:36:37] 2025-11-22 09:35:30,114 | INFO     | . get job = 0 s
[2025-11-22 04:36:37] 2025-11-22 09:35:30,114 | INFO     | . initial setup = 3 s
[2025-11-22 04:36:37] 2025-11-22 09:35:30,114 | INFO     | . payload setup = 22 s
[2025-11-22 04:36:37] 2025-11-22 09:35:30,114 | INFO     | . stage-in = 0 s
[2025-11-22 04:36:37] 2025-11-22 09:35:30,114 | INFO     | . payload execution = 65715 s
[2025-11-22 04:36:37] 2025-11-22 09:35:30,114 | INFO     | . stage-out = 6 s
[2025-11-22 04:36:37] 2025-11-22 09:35:30,115 | INFO     | . log creation = 1 s
[2025-11-22 04:36:37] 2025-11-22 09:35:30,115 | INFO     | ..............................
[2025-11-22 04:36:37] 2025-11-22 09:35:30,281 | INFO     | 
[2025-11-22 04:36:37] 2025-11-22 09:35:30,281 | INFO     | job summary report
[2025-11-22 04:36:37] 2025-11-22 09:35:30,281 | INFO     | --------------------------------------------------
[2025-11-22 04:36:37] 2025-11-22 09:35:30,281 | INFO     | PanDA job id: 6893848464
[2025-11-22 04:36:37] 2025-11-22 09:35:30,281 | INFO     | task id: 47523449
[2025-11-22 04:36:37] 2025-11-22 09:35:30,281 | INFO     | errors: (none)
[2025-11-22 04:36:37] 2025-11-22 09:35:30,281 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | pilot state: finished 
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | transexitcode: 0
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | exeerrorcode: 0
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | exeerrordiag: 
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | exitcode: 0
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | exitmsg: OK
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | cpuconsumptiontime: 233437 s
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | nevents: 1000
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | neventsw: 0
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | pid: 2716851
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | pgrp: 2716851
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | corecount: 8
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | event service: False
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | sizes: {0: 2298580, 1: 2298835, 12: 2298835, 16: 2299125, 23: 2299153, 65741: 2355329, 65742: 2355456, 65748: 2364562, 65779: 2364752}
[2025-11-22 04:36:37] 2025-11-22 09:35:30,282 | INFO     | --------------------------------------------------
[2025-11-22 04:36:37] 2025-11-22 09:35:30,283 | INFO     | 
[2025-11-22 04:36:37] 2025-11-22 09:35:30,283 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-22 04:36:37] 2025-11-22 09:35:30,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 04:36:37] 2025-11-22 09:35:30,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 04:36:37] 2025-11-22 09:35:30,357 | INFO     | job 6893848464 has completed (purged errors)
[2025-11-22 04:36:37] 2025-11-22 09:35:30,357 | INFO     | overall cleanup function is called
[2025-11-22 04:36:37] 2025-11-22 09:35:31,383 | INFO     | --- collectZombieJob: --- 10, [2716851]
[2025-11-22 04:36:37] 2025-11-22 09:35:31,383 | INFO     | zombie collector waiting for pid 2716851
[2025-11-22 04:36:37] 2025-11-22 09:35:31,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 04:36:37] 2025-11-22 09:35:31,383 | INFO     | collected zombie processes
[2025-11-22 04:36:37] 2025-11-22 09:35:31,383 | INFO     | will attempt to kill all subprocesses of pid=2716851
[2025-11-22 04:36:37] 2025-11-22 09:35:32,058 | INFO     | process IDs to be killed: [2716851] (in reverse order)
[2025-11-22 04:36:37] 2025-11-22 09:35:32,192 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 04:36:37] 2025-11-22 09:35:32,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 04:36:37] 2025-11-22 09:35:32,209 | INFO     | did not find any defunct processes belonging to 2716851
[2025-11-22 04:36:37] 2025-11-22 09:35:32,226 | INFO     | did not find any defunct processes belonging to 2716851
[2025-11-22 04:36:37] 2025-11-22 09:35:32,232 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 04:36:37] 2025-11-22 09:35:32,232 | INFO     | ready for new job
[2025-11-22 04:36:37] 2025-11-22 09:35:32,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 04:36:37] 2025-11-22 09:35:32,240 | INFO     | ***************************************
[2025-11-22 04:36:37] 2025-11-22 09:35:32,241 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 04:36:37] 2025-11-22 09:35:32,241 | INFO     | ***************************************
[2025-11-22 04:36:37] 2025-11-22 09:35:32,241 | INFO     | 
[2025-11-22 04:36:37] 2025-11-22 09:35:32,248 | INFO     | architecture information:
[2025-11-22 04:36:37] 2025-11-22 09:35:32,252 | INFO     | executing command: cat /etc/os-release
[2025-11-22 04:36:37] 2025-11-22 09:35:32,295 | INFO     | cat /etc/os-release:
[2025-11-22 04:36:37] NAME="CentOS Linux"
[2025-11-22 04:36:37] VERSION="7 (Core)"
[2025-11-22 04:36:37] ID="centos"
[2025-11-22 04:36:37] ID_LIKE="rhel fedora"
[2025-11-22 04:36:37] VERSION_ID="7"
[2025-11-22 04:36:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 04:36:37] ANSI_COLOR="0;31"
[2025-11-22 04:36:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 04:36:37] HOME_URL="https://www.centos.org/"
[2025-11-22 04:36:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 04:36:37] 
[2025-11-22 04:36:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 04:36:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 04:36:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 04:36:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 04:36:37] 
[2025-11-22 04:36:37] 2025-11-22 09:35:32,295 | INFO     | ***************************************
[2025-11-22 04:36:37] 2025-11-22 09:35:32,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-22 04:36:37] 2025-11-22 09:35:32,835 | INFO     | sufficient remaining disk space (67494739968 B)
[2025-11-22 04:36:37] 2025-11-22 09:35:32,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 04:36:37] 2025-11-22 09:35:32,836 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 04:36:37] 2025-11-22 09:35:32,836 | INFO     | update_server=False
[2025-11-22 04:36:37] 2025-11-22 09:35:32,836 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 04:36:37] 2025-11-22 09:35:32,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 04:36:37] 2025-11-22 09:35:32,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 04:36:37] 2025-11-22 09:35:32,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 04:36:37] 2025-11-22 09:35:32,837 | INFO     | aborting loop
[2025-11-22 04:36:37] 2025-11-22 09:35:33,585 | INFO     | all job control threads have been joined
[2025-11-22 04:36:37] 2025-11-22 09:35:33,842 | INFO     | [job] retrieve thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:33,845 | INFO     | [job] job monitor thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:33,881 | INFO     | all data control threads have been joined
[2025-11-22 04:36:37] 2025-11-22 09:35:33,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:33,985 | INFO     | [payload] validate_post thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:34,196 | INFO     | all payload control threads have been joined
[2025-11-22 04:36:37] 2025-11-22 09:35:34,325 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:34,590 | INFO     | [job] control thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:34,696 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:34,842 | INFO     | [data] copytool_out thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:34,887 | INFO     | [data] control thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:35,202 | INFO     | [payload] control thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:35,209 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:35,209 | INFO     | [data] copytool_in thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:35,260 | INFO     | [job] validate thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:35,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 04:36:37] 2025-11-22 09:35:35,326 | INFO     | [payload] failed_post thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:36,305 | INFO     | [job] queue monitor thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:35:36,848 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 04:36:37] 2025-11-22 09:36:02,300 | INFO     | PID=2710361 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 04:36:37] 2025-11-22 09:36:02,301 | INFO     | .. there are 13 such processes running
[2025-11-22 04:36:37] 2025-11-22 09:36:02,301 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 04:36:37] 2025-11-22 09:36:02,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 04:36:37] 2025-11-22 09:36:02,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 04:36:37] 2025-11-22 09:36:29,717 | INFO     | [monitor] cgroup control has ended
[2025-11-22 04:36:37] 2025-11-22 09:36:30,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459392939840)>', '<ExcThread(monitor, started 140458894280448)>']
[2025-11-22 04:36:37] 2025-11-22 09:36:31,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 04:36:37] 2025-11-22 09:36:31,484 | INFO     | [monitor] control thread has ended
[2025-11-22 04:36:37] 2025-11-22 09:36:35,903 | INFO     | all workflow threads have been joined
[2025-11-22 04:36:37] 2025-11-22 09:36:35,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 04:36:37] 2025-11-22 09:36:35,903 | INFO     | traces error code: 0
[2025-11-22 04:36:37] 2025-11-22 09:36:35,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 04:36:37] 2025-11-22 09:36:36,307 [wrapper] ==== pilot stdout END ====
[2025-11-22 04:36:37] 2025-11-22 09:36:36,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 04:36:37] 2025-11-22 09:36:36,355 [wrapper] pilotpid: 2710361
[2025-11-22 04:36:37] 2025-11-22 09:36:36,378 [wrapper] Pilot exit status: 0
[2025-11-22 04:36:37] 2025-11-22 09:36:36,450 [wrapper] pandaids: 6893848464
[2025-11-22 04:36:37] 2025-11-22 09:36:36,726 [wrapper] cleanup supervisor_pilot  246694 2710362
[2025-11-22 04:36:37] 2025-11-22 09:36:36,745 [wrapper] Test setup, not cleaning
[2025-11-22 04:36:37] 2025-11-22 09:36:36,757 [wrapper] apfmon messages muted
[2025-11-22 04:36:37] 2025-11-22 09:36:36,764 [wrapper] ==== wrapper stdout END ====
[2025-11-22 04:36:37] 2025-11-22 09:36:36,773 [wrapper] ==== wrapper stderr END ====
[2025-11-22 04:36:37]  *** Error codes and diagnostics ***
[2025-11-22 04:36:37]     "exeErrorCode": 0,
[2025-11-22 04:36:37]     "exeErrorDiag": "",
[2025-11-22 04:36:37]     "pilotErrorCode": 0,
[2025-11-22 04:36:37]     "pilotErrorDiag": "",
[2025-11-22 04:36:37]  *** Listing of results directory ***
[2025-11-22 04:36:37] total 1320360
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:38 queuedata.json
[2025-11-22 04:36:37] -rwx------. 1 boincer umatlas     36292 Nov 20 05:39 runpilot2-wrapper.sh
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas       100 Nov 21 10:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 04:36:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 10:17 run_atlas
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas       105 Nov 21 10:17 job.xml
[2025-11-22 04:36:37] -rw-r--r--. 2 boincer umatlas 410555740 Nov 21 10:18 EVNT.47493127._000273.pool.root.1
[2025-11-22 04:36:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 10:18 start_atlas.sh
[2025-11-22 04:36:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 10:18 shared
[2025-11-22 04:36:37] -rw-r--r--. 2 boincer umatlas    590097 Nov 21 10:18 input.tar.gz
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas         0 Nov 21 10:18 boinc_lockfile
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 10:18 pandaJob.out
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas        57 Nov 21 10:18 setup.sh.local
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas    989798 Nov 21 10:18 agis_schedconf.cvmfs.json
[2025-11-22 04:36:37] drwx------. 5 boincer umatlas      4096 Nov 21 10:18 pilot3
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas       533 Nov 22 04:06 boinc_task_state.xml
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas      6841 Nov 22 04:29 init_data.xml
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas 915653861 Nov 22 04:33 HITS.47523449._002722.pool.root.1
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas      1059 Nov 22 04:34 memory_monitor_summary.json
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas   1526164 Nov 22 04:34 agis_ddmendpoints.agis.ALL.json
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas   2214632 Nov 22 04:34 log.47523449._002722.job.log.tgz.1
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas        95 Nov 22 04:35 pilot_heartbeat.json
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas      8623 Nov 22 04:35 heartbeat.json
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 04:36 boinc_mmap_file
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas        29 Nov 22 04:36 wrapper_checkpoint.txt
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas      4824 Nov 22 04:36 pilotlog.txt
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas   8739033 Nov 22 04:36 log.47523449._002722.job.log.1
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas       353 Nov 22 04:36 output.list
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas       620 Nov 22 04:36 runtime_log
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas  10977280 Nov 22 04:36 result.tar.gz
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas      9353 Nov 22 04:36 runtime_log.err
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas       662 Nov 22 04:36 0QPLDmfFHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkWHKDmJZfrRm.diag
[2025-11-22 04:36:37] -rw-r--r--. 1 boincer umatlas     21860 Nov 22 04:36 stderr.txt
[2025-11-22 04:36:37] HITS file was successfully produced:
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas 915653861 Nov 22 04:33 shared/HITS.pool.root.1
[2025-11-22 04:36:37]  *** Contents of shared directory: ***
[2025-11-22 04:36:37] total 1306456
[2025-11-22 04:36:37] -rw-r--r--. 2 boincer umatlas 410555740 Nov 21 10:18 ATLAS.root_0
[2025-11-22 04:36:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 10:18 start_atlas.sh
[2025-11-22 04:36:37] -rw-r--r--. 2 boincer umatlas    590097 Nov 21 10:18 input.tar.gz
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas 915653861 Nov 22 04:33 HITS.pool.root.1
[2025-11-22 04:36:37] -rw-------. 1 boincer umatlas  10977280 Nov 22 04:36 result.tar.gz
04:36:38 (2704314): run_atlas exited; CPU time 234125.520950
04:36:38 (2704314): called boinc_finish(0)

</stderr_txt>
]]>

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