Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:28:10 (2762824): wrapper (7.7.26015): starting
10:28:10 (2762824): wrapper: running run_atlas (--nthreads 10)
[2025-11-21 10:28:10] Arguments: --nthreads 10
[2025-11-21 10:28:10] Threads: 10
[2025-11-21 10:28:10] Checking for CVMFS
[2025-11-21 10:28:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 10:28:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 10:28:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 10:28:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 10:28:10] 2.13.2.0 6956 26746 437820 153133 2 132 20828126 40960001 6055 16776704 0 101750114 99.658 77580081 36766 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 10:28:10] CVMFS is ok
[2025-11-21 10:28:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 10:28:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 10:28:10] Further information can be found at the LHC@home message board.
[2025-11-21 10:28:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 10:28:10] Checking for apptainer binary...
[2025-11-21 10:28:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 10:28:10] Running /usr/bin/apptainer --version
[2025-11-21 10:28:10] apptainer version 1.4.4-1.el9
[2025-11-21 10:28:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 10:28:11] c-206-34.aglt2.org
[2025-11-21 10:28:11] apptainer works
[2025-11-21 10:28:11] Set ATHENA_PROC_NUMBER=10
[2025-11-21 10:28:11] Set ATHENA_CORE_NUMBER=10
[2025-11-21 10:28:11] Starting ATLAS job with PandaID=6891597215
[2025-11-21 10:28:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 23:51:57]  *** The last 200 lines of the pilot log: ***
[2025-11-21 23:51:57] 2025-11-22 04:51:09,873 | INFO     | time since job start (48165s) is within the limit (172800.0s)
[2025-11-21 23:51:57] 2025-11-22 04:51:10,470 | INFO     | monitor loop #2969: job 0:6891597215 is in state 'finished'
[2025-11-21 23:51:57] 2025-11-22 04:51:10,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,581 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 23:51:57] 2025-11-22 04:51:11,627 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3268.2979375000004
[2025-11-21 23:51:57] 2025-11-22 04:51:11,642 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6891597215/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,642 | INFO     | extracted standard info from prmon json
[2025-11-21 23:51:57] 2025-11-22 04:51:11,643 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 23:51:57] 2025-11-22 04:51:11,643 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 23:51:57] 2025-11-22 04:51:11,656 | INFO     | fitting pss+swap vs Time
[2025-11-21 23:51:57] 2025-11-22 04:51:11,657 | INFO     | sum of square deviations: 152272336161.12784
[2025-11-21 23:51:57] 2025-11-22 04:51:11,670 | INFO     | sum of deviations: 1092600856021.9618
[2025-11-21 23:51:57] 2025-11-22 04:51:11,670 | INFO     | mean x: 1763762976.5880861
[2025-11-21 23:51:57] 2025-11-22 04:51:11,670 | INFO     | mean y: 3197289.187579214
[2025-11-21 23:51:57] 2025-11-22 04:51:11,670 | INFO     | intersect: -12652344660.341755
[2025-11-21 23:51:57] 2025-11-22 04:51:11,671 | INFO     | chi2: 5.04624674441356
[2025-11-21 23:51:57] 2025-11-22 04:51:11,672 | INFO     | sum of square deviations: 149396973076.39667
[2025-11-21 23:51:57] 2025-11-22 04:51:11,683 | INFO     | sum of deviations: 1362710933790.3152
[2025-11-21 23:51:57] 2025-11-22 04:51:11,683 | INFO     | mean x: 1763762824.1364796
[2025-11-21 23:51:57] 2025-11-22 04:51:11,683 | INFO     | mean y: 3211602.0344387754
[2025-11-21 23:51:57] 2025-11-22 04:51:11,683 | INFO     | intersect: -16084790956.321249
[2025-11-21 23:51:57] 2025-11-22 04:51:11,684 | INFO     | chi2: 2.1214784803122337
[2025-11-21 23:51:57] 2025-11-22 04:51:11,684 | INFO     | current chi2=2.1214784803122337 (change=57.95927968324551 %)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,685 | INFO     | sum of square deviations: 146557646325.18088
[2025-11-21 23:51:57] 2025-11-22 04:51:11,697 | INFO     | sum of deviations: 1374388884509.9036
[2025-11-21 23:51:57] 2025-11-22 04:51:11,697 | INFO     | mean x: 1763762671.673941
[2025-11-21 23:51:57] 2025-11-22 04:51:11,697 | INFO     | mean y: 3212222.36970475
[2025-11-21 23:51:57] 2025-11-22 04:51:11,697 | INFO     | intersect: -16537008446.046267
[2025-11-21 23:51:57] 2025-11-22 04:51:11,698 | INFO     | chi2: 2.036831177788099
[2025-11-21 23:51:57] 2025-11-22 04:51:11,698 | INFO     | current chi2=2.036831177788099 (change=3.990014667114435 %)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,698 | INFO     | right removable region: 778
[2025-11-21 23:51:57] 2025-11-22 04:51:11,699 | INFO     | sum of square deviations: 149393416926.93744
[2025-11-21 23:51:57] 2025-11-22 04:51:11,710 | INFO     | sum of deviations: 884321471253.3408
[2025-11-21 23:51:57] 2025-11-22 04:51:11,711 | INFO     | mean x: 1763763129.1339285
[2025-11-21 23:51:57] 2025-11-22 04:51:11,711 | INFO     | mean y: 3208302.272959184
[2025-11-21 23:51:57] 2025-11-22 04:51:11,711 | INFO     | intersect: -10437235710.47037
[2025-11-21 23:51:57] 2025-11-22 04:51:11,711 | INFO     | chi2: 3.14690984686127
[2025-11-21 23:51:57] 2025-11-22 04:51:11,712 | INFO     | current chi2=3.14690984686127 (change=37.63860535862516 %)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,712 | INFO     | sum of square deviations: 146551107370.4805
[2025-11-21 23:51:57] 2025-11-22 04:51:11,725 | INFO     | sum of deviations: 831434026828.4629
[2025-11-21 23:51:57] 2025-11-22 04:51:11,725 | INFO     | mean x: 1763763281.6765084
[2025-11-21 23:51:57] 2025-11-22 04:51:11,725 | INFO     | mean y: 3211139.2439024393
[2025-11-21 23:51:57] 2025-11-22 04:51:11,725 | INFO     | intersect: -10003214837.117355
[2025-11-21 23:51:57] 2025-11-22 04:51:11,726 | INFO     | chi2: 3.1030064582193804
[2025-11-21 23:51:57] 2025-11-22 04:51:11,726 | INFO     | current chi2=3.1030064582193804 (change=1.395126990551663 %)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,726 | INFO     | left removable region: 20
[2025-11-21 23:51:57] 2025-11-22 04:51:11,727 | INFO     | sum of square deviations: 135013442454.95512
[2025-11-21 23:51:57] 2025-11-22 04:51:11,738 | INFO     | sum of deviations: 1029958233357.6597
[2025-11-21 23:51:57] 2025-11-22 04:51:11,738 | INFO     | mean x: 1763763251.3614776
[2025-11-21 23:51:57] 2025-11-22 04:51:11,738 | INFO     | mean y: 3230696.6253298153
[2025-11-21 23:51:57] 2025-11-22 04:51:11,738 | INFO     | intersect: -13451744225.886604
[2025-11-21 23:51:57] 2025-11-22 04:51:11,739 | INFO     | chi2: 0.04546678526313663
[2025-11-21 23:51:57] 2025-11-22 04:51:11,739 | INFO     | current memory leak: 7.63 B/s (using 758 data points, chi2=0.05)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,740 | INFO     | could have reported an average CPU frequency of 3273 MHz (30 samples)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,740 | INFO     | ..............................
[2025-11-21 23:51:57] 2025-11-22 04:51:11,740 | INFO     | . Timing measurements:
[2025-11-21 23:51:57] 2025-11-22 04:51:11,740 | INFO     | . get job = 0 s
[2025-11-21 23:51:57] 2025-11-22 04:51:11,740 | INFO     | . initial setup = 2 s
[2025-11-21 23:51:57] 2025-11-22 04:51:11,740 | INFO     | . payload setup = 7 s
[2025-11-21 23:51:57] 2025-11-22 04:51:11,741 | INFO     | . stage-in = 0 s
[2025-11-21 23:51:57] 2025-11-22 04:51:11,741 | INFO     | . payload execution = 48118 s
[2025-11-21 23:51:57] 2025-11-22 04:51:11,741 | INFO     | . stage-out = 4 s
[2025-11-21 23:51:57] 2025-11-22 04:51:11,741 | INFO     | . log creation = 1 s
[2025-11-21 23:51:57] 2025-11-22 04:51:11,741 | INFO     | ..............................
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | 
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | job summary report
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | --------------------------------------------------
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | PanDA job id: 6891597215
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | task id: 47493068
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | errors: (none)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | pilot state: finished 
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | transexitcode: 0
[2025-11-21 23:51:57] 2025-11-22 04:51:11,818 | INFO     | exeerrorcode: 0
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | exeerrordiag: 
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | exitcode: 0
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | exitmsg: OK
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | cpuconsumptiontime: 197551 s
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | nevents: 1000
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | neventsw: 0
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | pid: 2774321
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | pgrp: 2774321
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | corecount: 10
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | event service: False
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | sizes: {0: 2298569, 1: 2298824, 6: 2299086, 12: 2299114, 48130: 2347208, 48136: 2356202, 48137: 2356386, 48151: 2356632}
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | --------------------------------------------------
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | 
[2025-11-21 23:51:57] 2025-11-22 04:51:11,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-21 23:51:57] 2025-11-22 04:51:11,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,878 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,878 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 23:51:57] 2025-11-22 04:51:11,878 | INFO     | job 6891597215 has completed (purged errors)
[2025-11-21 23:51:57] 2025-11-22 04:51:11,878 | INFO     | overall cleanup function is called
[2025-11-21 23:51:57] 2025-11-22 04:51:12,901 | INFO     | --- collectZombieJob: --- 10, [2774321]
[2025-11-21 23:51:57] 2025-11-22 04:51:12,901 | INFO     | zombie collector waiting for pid 2774321
[2025-11-21 23:51:57] 2025-11-22 04:51:12,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 23:51:57] 2025-11-22 04:51:12,901 | INFO     | collected zombie processes
[2025-11-21 23:51:57] 2025-11-22 04:51:12,902 | INFO     | will attempt to kill all subprocesses of pid=2774321
[2025-11-21 23:51:57] 2025-11-22 04:51:13,320 | INFO     | process IDs to be killed: [2774321] (in reverse order)
[2025-11-21 23:51:57] 2025-11-22 04:51:13,499 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 23:51:57] 2025-11-22 04:51:13,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 23:51:57] 2025-11-22 04:51:13,518 | INFO     | did not find any defunct processes belonging to 2774321
[2025-11-21 23:51:57] 2025-11-22 04:51:13,533 | INFO     | did not find any defunct processes belonging to 2774321
[2025-11-21 23:51:57] 2025-11-22 04:51:13,536 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 23:51:57] 2025-11-22 04:51:13,536 | INFO     | ready for new job
[2025-11-21 23:51:57] 2025-11-22 04:51:13,536 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 23:51:57] 2025-11-22 04:51:13,543 | INFO     | ***************************************
[2025-11-21 23:51:57] 2025-11-22 04:51:13,544 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 23:51:57] 2025-11-22 04:51:13,544 | INFO     | ***************************************
[2025-11-21 23:51:57] 2025-11-22 04:51:13,544 | INFO     | 
[2025-11-21 23:51:57] 2025-11-22 04:51:13,548 | INFO     | architecture information:
[2025-11-21 23:51:57] 2025-11-22 04:51:13,549 | INFO     | executing command: cat /etc/os-release
[2025-11-21 23:51:57] 2025-11-22 04:51:13,580 | INFO     | cat /etc/os-release:
[2025-11-21 23:51:57] NAME="CentOS Linux"
[2025-11-21 23:51:57] VERSION="7 (Core)"
[2025-11-21 23:51:57] ID="centos"
[2025-11-21 23:51:57] ID_LIKE="rhel fedora"
[2025-11-21 23:51:57] VERSION_ID="7"
[2025-11-21 23:51:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 23:51:57] ANSI_COLOR="0;31"
[2025-11-21 23:51:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 23:51:57] HOME_URL="https://www.centos.org/"
[2025-11-21 23:51:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 23:51:57] 
[2025-11-21 23:51:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 23:51:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 23:51:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 23:51:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 23:51:57] 
[2025-11-21 23:51:57] 2025-11-22 04:51:13,581 | INFO     | ***************************************
[2025-11-21 23:51:57] 2025-11-22 04:51:14,084 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-21 23:51:57] 2025-11-22 04:51:14,139 | INFO     | sufficient remaining disk space (78801534976 B)
[2025-11-21 23:51:57] 2025-11-22 04:51:14,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 23:51:57] 2025-11-22 04:51:14,140 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 23:51:57] 2025-11-22 04:51:14,140 | INFO     | update_server=False
[2025-11-21 23:51:57] 2025-11-22 04:51:14,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 23:51:57] 2025-11-22 04:51:14,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:51:57] 2025-11-22 04:51:14,141 | INFO     | aborting loop
[2025-11-21 23:51:57] 2025-11-22 04:51:14,396 | INFO     | all data control threads have been joined
[2025-11-21 23:51:57] 2025-11-22 04:51:14,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 23:51:57] 2025-11-22 04:51:14,811 | INFO     | all payload control threads have been joined
[2025-11-21 23:51:57] 2025-11-22 04:51:15,145 | INFO     | [job] retrieve thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:15,152 | INFO     | [job] job monitor thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:15,214 | INFO     | [payload] failed_post thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:15,360 | INFO     | [data] copytool_in thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:15,401 | INFO     | [data] control thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:15,556 | INFO     | all job control threads have been joined
[2025-11-21 23:51:57] 2025-11-22 04:51:15,817 | INFO     | [payload] control thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:15,952 | INFO     | [job] validate thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:16,064 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:16,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:16,340 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:16,516 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:16,563 | INFO     | [job] control thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:16,678 | INFO     | [payload] validate_post thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:16,685 | INFO     | [data] copytool_out thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:16,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:51:57] 2025-11-22 04:51:17,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 23:51:57] 2025-11-22 04:51:17,841 | INFO     | [job] queue monitor thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:21,548 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 23:51:57] 2025-11-22 04:51:43,354 | INFO     | PID=2766497 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 23:51:57] 2025-11-22 04:51:43,355 | INFO     | .. there are 20 such processes running
[2025-11-21 23:51:57] 2025-11-22 04:51:43,355 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 23:51:57] 2025-11-22 04:51:43,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 23:51:57] 2025-11-22 04:51:43,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 23:51:57] 2025-11-22 04:51:50,311 | INFO     | [monitor] cgroup control has ended
[2025-11-21 23:51:57] 2025-11-22 04:51:51,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139921379972928)>', '<ExcThread(monitor, started 139920890910464)>']
[2025-11-21 23:51:57] 2025-11-22 04:51:52,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 23:51:57] 2025-11-22 04:51:52,406 | INFO     | [monitor] control thread has ended
[2025-11-21 23:51:57] 2025-11-22 04:51:56,860 | INFO     | all workflow threads have been joined
[2025-11-21 23:51:57] 2025-11-22 04:51:56,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 23:51:57] 2025-11-22 04:51:56,860 | INFO     | traces error code: 0
[2025-11-21 23:51:57] 2025-11-22 04:51:56,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 23:51:57] 2025-11-22 04:51:57,049 [wrapper] ==== pilot stdout END ====
[2025-11-21 23:51:57] 2025-11-22 04:51:57,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 23:51:57] 2025-11-22 04:51:57,057 [wrapper] pilotpid: 2766497
[2025-11-21 23:51:57] 2025-11-22 04:51:57,064 [wrapper] Pilot exit status: 0
[2025-11-21 23:51:57] 2025-11-22 04:51:57,122 [wrapper] pandaids: 6891597215
[2025-11-21 23:51:57] 2025-11-22 04:51:57,226 [wrapper] cleanup supervisor_pilot  558626 2766498
[2025-11-21 23:51:57] 2025-11-22 04:51:57,232 [wrapper] Test setup, not cleaning
[2025-11-21 23:51:57] 2025-11-22 04:51:57,243 [wrapper] apfmon messages muted
[2025-11-21 23:51:57] 2025-11-22 04:51:57,255 [wrapper] ==== wrapper stdout END ====
[2025-11-21 23:51:57] 2025-11-22 04:51:57,261 [wrapper] ==== wrapper stderr END ====
[2025-11-21 23:51:57]  *** Error codes and diagnostics ***
[2025-11-21 23:51:57]     "exeErrorCode": 0,
[2025-11-21 23:51:57]     "exeErrorDiag": "",
[2025-11-21 23:51:57]     "pilotErrorCode": 0,
[2025-11-21 23:51:57]     "pilotErrorDiag": "",
[2025-11-21 23:51:57]  *** Listing of results directory ***
[2025-11-21 23:51:57] total 1313168
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:50 pilot3.tar.gz
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 13:55 queuedata.json
[2025-11-21 23:51:57] -rwx------. 1 boincer umatlas     36292 Nov 18 13:56 runpilot2-wrapper.sh
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas       100 Nov 21 10:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 23:51:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 10:28 run_atlas
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas       105 Nov 21 10:28 job.xml
[2025-11-21 23:51:57] -rw-r--r--. 2 boincer umatlas 409706194 Nov 21 10:28 EVNT.47493065._000797.pool.root.1
[2025-11-21 23:51:57] -rw-r--r--. 2 boincer umatlas     15120 Nov 21 10:28 start_atlas.sh
[2025-11-21 23:51:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 10:28 shared
[2025-11-21 23:51:57] -rw-r--r--. 2 boincer umatlas    590095 Nov 21 10:28 input.tar.gz
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas         0 Nov 21 10:28 boinc_lockfile
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas      2773 Nov 21 10:28 pandaJob.out
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas    989798 Nov 21 10:28 agis_schedconf.cvmfs.json
[2025-11-21 23:51:57] drwx------. 5 boincer umatlas      4096 Nov 21 10:28 pilot3
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas       533 Nov 21 23:42 boinc_task_state.xml
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas      6902 Nov 21 23:47 init_data.xml
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas 914220145 Nov 21 23:50 HITS.47493068._006616.pool.root.1
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas      1054 Nov 21 23:50 memory_monitor_summary.json
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas   1526164 Nov 21 23:50 agis_ddmendpoints.agis.ALL.json
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas   2186325 Nov 21 23:50 log.47493068._006616.job.log.tgz.1
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas      8590 Nov 21 23:51 heartbeat.json
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas        95 Nov 21 23:51 pilot_heartbeat.json
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas        29 Nov 21 23:51 wrapper_checkpoint.txt
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas      4824 Nov 21 23:51 pilotlog.txt
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas   6232074 Nov 21 23:51 log.47493068._006616.job.log.1
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 23:51 boinc_mmap_file
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas       353 Nov 21 23:51 output.list
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas       620 Nov 21 23:51 runtime_log
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas   8437760 Nov 21 23:51 result.tar.gz
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas      8706 Nov 21 23:51 runtime_log.err
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas       661 Nov 21 23:51 dEsLDmA3ff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZMGKDm5IcWGo.diag
[2025-11-21 23:51:57] -rw-r--r--. 1 boincer umatlas     21348 Nov 21 23:51 stderr.txt
[2025-11-21 23:51:57] HITS file was successfully produced:
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas 914220145 Nov 21 23:50 shared/HITS.pool.root.1
[2025-11-21 23:51:57]  *** Contents of shared directory: ***
[2025-11-21 23:51:57] total 1301744
[2025-11-21 23:51:57] -rw-r--r--. 2 boincer umatlas 409706194 Nov 21 10:28 ATLAS.root_0
[2025-11-21 23:51:57] -rw-r--r--. 2 boincer umatlas     15120 Nov 21 10:28 start_atlas.sh
[2025-11-21 23:51:57] -rw-r--r--. 2 boincer umatlas    590095 Nov 21 10:28 input.tar.gz
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas 914220145 Nov 21 23:50 HITS.pool.root.1
[2025-11-21 23:51:57] -rw-------. 1 boincer umatlas   8437760 Nov 21 23:51 result.tar.gz
23:51:59 (2762824): run_atlas exited; CPU time 197382.831975
23:51:59 (2762824): called boinc_finish(0)

</stderr_txt>
]]>

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