Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:16:08 (1637999): wrapper (7.7.26015): starting
09:16:08 (1637999): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 09:16:08] Arguments: --nthreads 3
[2025-11-24 09:16:08] Threads: 3
[2025-11-24 09:16:08] Checking for CVMFS
[2025-11-24 09:16:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:16:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:16:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:16:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:16:08] 2.9.2.0 528461 8062 87860 153239 2 71 34560571 36864001 0 130560 0 2996947 99.915 448677 5826 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 09:16:08] CVMFS is ok
[2025-11-24 09:16:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:16:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:16:08] Further information can be found at the LHC@home message board.
[2025-11-24 09:16:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:16:08] Checking for apptainer binary...
[2025-11-24 09:16:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:16:08] Running /usr/bin/apptainer --version
[2025-11-24 09:16:08] apptainer version 1.4.1-1.1
[2025-11-24 09:16:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:16:08] magicA246a
[2025-11-24 09:16:08] apptainer works
[2025-11-24 09:16:08] Set ATHENA_PROC_NUMBER=3
[2025-11-24 09:16:08] Set ATHENA_CORE_NUMBER=3
[2025-11-24 09:16:08] Starting ATLAS job with PandaID=6893881085
[2025-11-24 09:16:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:07:52]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:07:52] 2025-11-24 16:06:54,506 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 17:07:52] 2025-11-24 16:06:54,506 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:07:52] 2025-11-24 16:06:54,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:07:52] 2025-11-24 16:06:54,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:07:52] 2025-11-24 16:06:54,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:07:52] 2025-11-24 16:06:54,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:07:52] 2025-11-24 16:06:54,623 | INFO     | aborting loop
[2025-11-24 17:07:52] 2025-11-24 16:06:54,773 | INFO     | all job control threads have been joined
[2025-11-24 17:07:52] 2025-11-24 16:06:54,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:07:52] 2025-11-24 16:06:54,839 | INFO     | all payload control threads have been joined
[2025-11-24 17:07:52] 2025-11-24 16:06:55,280 | INFO     | all data control threads have been joined
[2025-11-24 17:07:52] 2025-11-24 16:06:55,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:07:52] 2025-11-24 16:06:55,511 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:55,512 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:55,629 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:55,779 | INFO     | [job] control thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:55,845 | INFO     | [payload] control thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:55,893 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:55,911 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:55,983 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:56,285 | INFO     | [data] control thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:56,405 | INFO     | [job] validate thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:56,428 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:56,578 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:56,578 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:56,648 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:56,845 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:06:59,506 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:07:52] 2025-11-24 16:07:46,765 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:07:52] 2025-11-24 16:07:47,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380575696704)>', '<ExcThread(monitor, started 140379714213632)>']
[2025-11-24 17:07:52] 2025-11-24 16:07:47,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:07:52] 2025-11-24 16:07:47,779 | INFO     | [monitor] control thread has ended
[2025-11-24 17:07:52] 2025-11-24 16:07:52,201 | INFO     | all workflow threads have been joined
[2025-11-24 17:07:52] 2025-11-24 16:07:52,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:07:52] 2025-11-24 16:07:52,202 | INFO     | traces error code: 0
[2025-11-24 17:07:52] 2025-11-24 16:07:52,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:07:52] 2025-11-24 16:07:52,255 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:07:52] 2025-11-24 16:07:52,257 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:07:52] 2025-11-24 16:07:52,260 [wrapper] pilotpid: 1641718
[2025-11-24 17:07:52] 2025-11-24 16:07:52,262 [wrapper] Pilot exit status: 0
[2025-11-24 17:07:52] 2025-11-24 16:07:52,269 [wrapper] pandaids: 6893881085
[2025-11-24 17:07:52] 2025-11-24 16:07:52,286 [wrapper] cleanup supervisor_pilot 1700597 1641719
[2025-11-24 17:07:52] 2025-11-24 16:07:52,288 [wrapper] Test setup, not cleaning
[2025-11-24 17:07:52] 2025-11-24 16:07:52,291 [wrapper] apfmon messages muted
[2025-11-24 17:07:52] 2025-11-24 16:07:52,293 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:07:52] 2025-11-24 16:07:52,295 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:07:52]  *** Error codes and diagnostics ***
[2025-11-24 17:07:52]     "exeErrorCode": 0,
[2025-11-24 17:07:52]     "exeErrorDiag": "",
[2025-11-24 17:07:52]     "pilotErrorCode": 0,
[2025-11-24 17:07:52]     "pilotErrorDiag": "",
[2025-11-24 17:07:52]  *** Listing of results directory ***
[2025-11-24 17:07:52] total 1310000
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc    576529 Nov 20 20:10 pilot3.tar.gz
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc      5112 Nov 20 20:45 queuedata.json
[2025-11-24 17:07:52] -rwx------ 1 boinc boinc     36292 Nov 20 20:45 runpilot2-wrapper.sh
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc       100 Nov 24 09:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:07:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 09:16 run_atlas
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc       105 Nov 24 09:16 job.xml
[2025-11-24 17:07:52] -rw-r--r-- 2 boinc boinc 410551669 Nov 24 09:16 EVNT.47493127._000849.pool.root.1
[2025-11-24 17:07:52] -rw-r--r-- 2 boinc boinc    590093 Nov 24 09:16 input.tar.gz
[2025-11-24 17:07:52] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:16 start_atlas.sh
[2025-11-24 17:07:52] drwxrwx--x 2 boinc boinc      4096 Nov 24 09:16 shared
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:16 boinc_setup_complete
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc      6447 Nov 24 09:16 init_data.xml
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:16 boinc_lockfile
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc      2785 Nov 24 09:16 pandaJob.out
[2025-11-24 17:07:52] -rw------- 1 boinc boinc    989794 Nov 24 09:16 agis_schedconf.cvmfs.json
[2025-11-24 17:07:52] drwx------ 5 boinc boinc      4096 Nov 24 09:16 pilot3
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc       531 Nov 24 17:03 boinc_task_state.xml
[2025-11-24 17:07:52] -rw------- 1 boinc boinc 916722598 Nov 24 17:06 HITS.47523449._008482.pool.root.1
[2025-11-24 17:07:52] -rw------- 1 boinc boinc        95 Nov 24 17:06 pilot_heartbeat.json
[2025-11-24 17:07:52] -rw------- 1 boinc boinc      1035 Nov 24 17:06 memory_monitor_summary.json
[2025-11-24 17:07:52] -rw------- 1 boinc boinc   1516227 Nov 24 17:06 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:07:52] -rw------- 1 boinc boinc   1159298 Nov 24 17:06 log.47523449._008482.job.log.tgz.1
[2025-11-24 17:07:52] -rw------- 1 boinc boinc      8567 Nov 24 17:06 heartbeat.json
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc      8192 Nov 24 17:07 boinc_mmap_file
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc        28 Nov 24 17:07 wrapper_checkpoint.txt
[2025-11-24 17:07:52] -rw------- 1 boinc boinc      4556 Nov 24 17:07 pilotlog.txt
[2025-11-24 17:07:52] -rw------- 1 boinc boinc   3976530 Nov 24 17:07 log.47523449._008482.job.log.1
[2025-11-24 17:07:52] -rw------- 1 boinc boinc       353 Nov 24 17:07 output.list
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc       620 Nov 24 17:07 runtime_log
[2025-11-24 17:07:52] -rw------- 1 boinc boinc   5150720 Nov 24 17:07 result.tar.gz
[2025-11-24 17:07:52] -rw------- 1 boinc boinc       669 Nov 24 17:07 t3OKDmKmPg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWSIKDmn3Nlgn.diag
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc      8918 Nov 24 17:07 runtime_log.err
[2025-11-24 17:07:52] -rw-r--r-- 1 boinc boinc      7120 Nov 24 17:07 stderr.txt
[2025-11-24 17:07:52] HITS file was successfully produced:
[2025-11-24 17:07:52] -rw------- 1 boinc boinc 916722598 Nov 24 17:06 shared/HITS.pool.root.1
[2025-11-24 17:07:52]  *** Contents of shared directory: ***
[2025-11-24 17:07:52] total 1301804
[2025-11-24 17:07:52] -rw-r--r-- 2 boinc boinc 410551669 Nov 24 09:16 ATLAS.root_0
[2025-11-24 17:07:52] -rw-r--r-- 2 boinc boinc    590093 Nov 24 09:16 input.tar.gz
[2025-11-24 17:07:52] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:16 start_atlas.sh
[2025-11-24 17:07:52] -rw------- 1 boinc boinc 916722598 Nov 24 17:06 HITS.pool.root.1
[2025-11-24 17:07:52] -rw------- 1 boinc boinc   5150720 Nov 24 17:07 result.tar.gz
17:08:14 (1637999): run_atlas exited; CPU time 83337.966564
17:08:14 (1637999): called boinc_finish(0)

</stderr_txt>
]]>

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