Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:21 (3773155): wrapper (7.7.26015): starting
09:35:21 (3773155): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 09:35:21] Arguments: --nthreads 8
[2025-11-21 09:35:21] Threads: 8
[2025-11-21 09:35:21] Checking for CVMFS
[2025-11-21 09:35:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 09:35:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 09:35:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 09:35:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 09:35:21] 2.13.2.0 7688 25838 177448 153131 0 81 22844917 39288833 3768 16776704 0 14910496 99.675 10144797 30426 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 09:35:21] CVMFS is ok
[2025-11-21 09:35:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 09:35:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 09:35:22] Further information can be found at the LHC@home message board.
[2025-11-21 09:35:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 09:35:22] Checking for apptainer binary...
[2025-11-21 09:35:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 09:35:22] Running /usr/bin/apptainer --version
[2025-11-21 09:35:22] apptainer version 1.4.4-1.el9
[2025-11-21 09:35:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 09:35:22] c-210-1.aglt2.org
[2025-11-21 09:35:22] apptainer works
[2025-11-21 09:35:22] Set ATHENA_PROC_NUMBER=8
[2025-11-21 09:35:22] Set ATHENA_CORE_NUMBER=8
[2025-11-21 09:35:22] Starting ATLAS job with PandaID=6894247003
[2025-11-21 09:35:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 18:54:23]  *** The last 200 lines of the pilot log: ***
[2025-11-22 18:54:23] 2025-11-22 23:53:47,594 | INFO     | monitor loop #7068: job 0:6894247003 is in state 'finished'
[2025-11-22 18:54:23] 2025-11-22 23:53:47,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:54:23] 2025-11-22 23:53:48,377 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 18:54:23] 2025-11-22 23:53:48,384 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8650500000003
[2025-11-22 18:54:23] 2025-11-22 23:53:48,403 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6894247003/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 18:54:23] 2025-11-22 23:53:48,404 | INFO     | extracted standard info from prmon json
[2025-11-22 18:54:23] 2025-11-22 23:53:48,404 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 18:54:23] 2025-11-22 23:53:48,404 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 18:54:23] 2025-11-22 23:53:48,440 | INFO     | fitting pss+swap vs Time
[2025-11-22 18:54:23] 2025-11-22 23:53:48,443 | INFO     | sum of square deviations: 2352670199391.219
[2025-11-22 18:54:23] 2025-11-22 23:53:48,557 | INFO     | sum of deviations: 5906252664733.618
[2025-11-22 18:54:23] 2025-11-22 23:53:48,557 | INFO     | mean x: 1763795664.2569973
[2025-11-22 18:54:23] 2025-11-22 23:53:48,557 | INFO     | mean y: 2990362.73740458
[2025-11-22 18:54:23] 2025-11-22 23:53:48,557 | INFO     | intersect: -4424924287.075868
[2025-11-22 18:54:23] 2025-11-22 23:53:48,560 | INFO     | chi2: 5.81726104497161
[2025-11-22 18:54:23] 2025-11-22 23:53:48,562 | INFO     | sum of square deviations: 2334759488442.6846
[2025-11-22 18:54:23] 2025-11-22 23:53:48,661 | INFO     | sum of deviations: 6592319860341.808
[2025-11-22 18:54:23] 2025-11-22 23:53:48,662 | INFO     | mean x: 1763795511.7704082
[2025-11-22 18:54:23] 2025-11-22 23:53:48,662 | INFO     | mean y: 2996204.555102041
[2025-11-22 18:54:23] 2025-11-22 23:53:48,662 | INFO     | intersect: -4977175945.674172
[2025-11-22 18:54:23] 2025-11-22 23:53:48,665 | INFO     | chi2: 2.7299946767190777
[2025-11-22 18:54:23] 2025-11-22 23:53:48,665 | INFO     | current chi2=2.7299946767190777 (change=53.070789575811425 %)
[2025-11-22 18:54:23] 2025-11-22 23:53:48,668 | INFO     | sum of square deviations: 2316939941993.4443
[2025-11-22 18:54:23] 2025-11-22 23:53:48,770 | INFO     | time since job start (119896s) is within the limit (172800.0s)
[2025-11-22 18:54:23] 2025-11-22 23:53:48,776 | INFO     | sum of deviations: 6788915002249.015
[2025-11-22 18:54:23] 2025-11-22 23:53:48,776 | INFO     | mean x: 1763795359.2838874
[2025-11-22 18:54:23] 2025-11-22 23:53:48,776 | INFO     | mean y: 2997885.841432225
[2025-11-22 18:54:23] 2025-11-22 23:53:48,777 | INFO     | intersect: -5165136409.964779
[2025-11-22 18:54:23] 2025-11-22 23:53:48,779 | INFO     | chi2: 2.3363480298931463
[2025-11-22 18:54:23] 2025-11-22 23:53:48,780 | INFO     | current chi2=2.3363480298931463 (change=14.419319209040292 %)
[2025-11-22 18:54:23] 2025-11-22 23:53:48,780 | INFO     | right removable region: 1954
[2025-11-22 18:54:23] 2025-11-22 23:53:48,782 | INFO     | sum of square deviations: 2334753187142.6855
[2025-11-22 18:54:23] 2025-11-22 23:53:48,888 | INFO     | sum of deviations: 5420103306827.354
[2025-11-22 18:54:23] 2025-11-22 23:53:48,889 | INFO     | mean x: 1763795816.7704082
[2025-11-22 18:54:23] 2025-11-22 23:53:48,889 | INFO     | mean y: 2994497.6163265305
[2025-11-22 18:54:23] 2025-11-22 23:53:48,889 | INFO     | intersect: -4091637685.216324
[2025-11-22 18:54:23] 2025-11-22 23:53:48,891 | INFO     | chi2: 3.9507346258686047
[2025-11-22 18:54:23] 2025-11-22 23:53:48,892 | INFO     | current chi2=3.9507346258686047 (change=32.08600069127746 %)
[2025-11-22 18:54:23] 2025-11-22 23:53:48,894 | INFO     | sum of square deviations: 2316927458963.007
[2025-11-22 18:54:23] 2025-11-22 23:53:49,010 | INFO     | sum of deviations: 5286770756123.794
[2025-11-22 18:54:23] 2025-11-22 23:53:49,010 | INFO     | mean x: 1763795969.283376
[2025-11-22 18:54:23] 2025-11-22 23:53:49,011 | INFO     | mean y: 2995638.171867008
[2025-11-22 18:54:23] 2025-11-22 23:53:49,011 | INFO     | intersect: -4021638328.724055
[2025-11-22 18:54:23] 2025-11-22 23:53:49,013 | INFO     | chi2: 3.8945197706974968
[2025-11-22 18:54:23] 2025-11-22 23:53:49,014 | INFO     | current chi2=3.8945197706974968 (change=1.4228962584078542 %)
[2025-11-22 18:54:23] 2025-11-22 23:53:49,014 | INFO     | left removable region: 20
[2025-11-22 18:54:23] 2025-11-22 23:53:49,017 | INFO     | sum of square deviations: 2243063029076.947
[2025-11-22 18:54:23] 2025-11-22 23:53:49,118 | INFO     | sum of deviations: 6017031132562.449
[2025-11-22 18:54:23] 2025-11-22 23:53:49,119 | INFO     | mean x: 1763795938.8407445
[2025-11-22 18:54:23] 2025-11-22 23:53:49,119 | INFO     | mean y: 3004796.4105480867
[2025-11-22 18:54:23] 2025-11-22 23:53:49,119 | INFO     | intersect: -4728389256.238655
[2025-11-22 18:54:23] 2025-11-22 23:53:49,122 | INFO     | chi2: 0.3717833230502562
[2025-11-22 18:54:23] 2025-11-22 23:53:49,122 | INFO     | current memory leak: 2.68 B/s (using 1934 data points, chi2=0.37)
[2025-11-22 18:54:23] 2025-11-22 23:53:49,123 | INFO     | could have reported an average CPU frequency of 2599 MHz (68 samples)
[2025-11-22 18:54:23] 2025-11-22 23:53:49,123 | INFO     | ..............................
[2025-11-22 18:54:23] 2025-11-22 23:53:49,124 | INFO     | . Timing measurements:
[2025-11-22 18:54:23] 2025-11-22 23:53:49,124 | INFO     | . get job = 0 s
[2025-11-22 18:54:23] 2025-11-22 23:53:49,124 | INFO     | . initial setup = 2 s
[2025-11-22 18:54:23] 2025-11-22 23:53:49,124 | INFO     | . payload setup = 5 s
[2025-11-22 18:54:23] 2025-11-22 23:53:49,124 | INFO     | . stage-in = 0 s
[2025-11-22 18:54:23] 2025-11-22 23:53:49,124 | INFO     | . payload execution = 119855 s
[2025-11-22 18:54:23] 2025-11-22 23:53:49,124 | INFO     | . stage-out = 4 s
[2025-11-22 18:54:23] 2025-11-22 23:53:49,124 | INFO     | . log creation = 1 s
[2025-11-22 18:54:23] 2025-11-22 23:53:49,124 | INFO     | ..............................
[2025-11-22 18:54:23] 2025-11-22 23:53:49,237 | INFO     | 
[2025-11-22 18:54:23] 2025-11-22 23:53:49,238 | INFO     | job summary report
[2025-11-22 18:54:23] 2025-11-22 23:53:49,238 | INFO     | --------------------------------------------------
[2025-11-22 18:54:23] 2025-11-22 23:53:49,238 | INFO     | PanDA job id: 6894247003
[2025-11-22 18:54:23] 2025-11-22 23:53:49,238 | INFO     | task id: 47533967
[2025-11-22 18:54:23] 2025-11-22 23:53:49,238 | INFO     | errors: (none)
[2025-11-22 18:54:23] 2025-11-22 23:53:49,238 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 18:54:23] 2025-11-22 23:53:49,238 | INFO     | pilot state: finished 
[2025-11-22 18:54:23] 2025-11-22 23:53:49,238 | INFO     | transexitcode: 0
[2025-11-22 18:54:23] 2025-11-22 23:53:49,238 | INFO     | exeerrorcode: 0
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | exeerrordiag: 
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | exitcode: 0
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | exitmsg: OK
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | cpuconsumptiontime: 293089 s
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | nevents: 1000
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | neventsw: 0
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | pid: 3783225
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | pgrp: 3783225
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | corecount: 8
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | event service: False
[2025-11-22 18:54:23] 2025-11-22 23:53:49,239 | INFO     | sizes: {0: 2298754, 4: 2299016, 11: 2299044, 119864: 2379576, 119869: 2388626, 119881: 2388816}
[2025-11-22 18:54:23] 2025-11-22 23:53:49,240 | INFO     | --------------------------------------------------
[2025-11-22 18:54:23] 2025-11-22 23:53:49,240 | INFO     | 
[2025-11-22 18:54:23] 2025-11-22 23:53:49,240 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-22 18:54:23] 2025-11-22 23:53:49,264 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,266 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 18:54:23] 2025-11-22 23:53:49,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,266 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 18:54:23] 2025-11-22 23:53:49,267 | INFO     | job 6894247003 has completed (purged errors)
[2025-11-22 18:54:23] 2025-11-22 23:53:49,267 | INFO     | overall cleanup function is called
[2025-11-22 18:54:23] 2025-11-22 23:53:50,285 | INFO     | --- collectZombieJob: --- 10, [3783225]
[2025-11-22 18:54:23] 2025-11-22 23:53:50,287 | INFO     | zombie collector waiting for pid 3783225
[2025-11-22 18:54:23] 2025-11-22 23:53:50,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 18:54:23] 2025-11-22 23:53:50,287 | INFO     | collected zombie processes
[2025-11-22 18:54:23] 2025-11-22 23:53:50,287 | INFO     | will attempt to kill all subprocesses of pid=3783225
[2025-11-22 18:54:23] 2025-11-22 23:53:50,531 | INFO     | process IDs to be killed: [3783225] (in reverse order)
[2025-11-22 18:54:23] 2025-11-22 23:53:50,601 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 18:54:23] 2025-11-22 23:53:50,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 18:54:23] 2025-11-22 23:53:50,610 | INFO     | did not find any defunct processes belonging to 3783225
[2025-11-22 18:54:23] 2025-11-22 23:53:50,621 | INFO     | did not find any defunct processes belonging to 3783225
[2025-11-22 18:54:23] 2025-11-22 23:53:50,623 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 18:54:23] 2025-11-22 23:53:50,623 | INFO     | ready for new job
[2025-11-22 18:54:23] 2025-11-22 23:53:50,623 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 18:54:23] 2025-11-22 23:53:50,631 | INFO     | ***************************************
[2025-11-22 18:54:23] 2025-11-22 23:53:50,632 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 18:54:23] 2025-11-22 23:53:50,632 | INFO     | ***************************************
[2025-11-22 18:54:23] 2025-11-22 23:53:50,632 | INFO     | 
[2025-11-22 18:54:23] 2025-11-22 23:53:50,634 | INFO     | architecture information:
[2025-11-22 18:54:23] 2025-11-22 23:53:50,635 | INFO     | executing command: cat /etc/os-release
[2025-11-22 18:54:23] 2025-11-22 23:53:50,653 | INFO     | cat /etc/os-release:
[2025-11-22 18:54:23] NAME="CentOS Linux"
[2025-11-22 18:54:23] VERSION="7 (Core)"
[2025-11-22 18:54:23] ID="centos"
[2025-11-22 18:54:23] ID_LIKE="rhel fedora"
[2025-11-22 18:54:23] VERSION_ID="7"
[2025-11-22 18:54:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 18:54:23] ANSI_COLOR="0;31"
[2025-11-22 18:54:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 18:54:23] HOME_URL="https://www.centos.org/"
[2025-11-22 18:54:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 18:54:23] 
[2025-11-22 18:54:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 18:54:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 18:54:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 18:54:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 18:54:23] 
[2025-11-22 18:54:23] 2025-11-22 23:53:50,654 | INFO     | ***************************************
[2025-11-22 18:54:23] 2025-11-22 23:53:51,157 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-22 18:54:23] 2025-11-22 23:53:51,184 | INFO     | sufficient remaining disk space (51045728256 B)
[2025-11-22 18:54:23] 2025-11-22 23:53:51,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 18:54:23] 2025-11-22 23:53:51,185 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 18:54:23] 2025-11-22 23:53:51,185 | INFO     | update_server=False
[2025-11-22 18:54:23] 2025-11-22 23:53:51,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 18:54:23] 2025-11-22 23:53:51,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:54:23] 2025-11-22 23:53:51,186 | INFO     | aborting loop
[2025-11-22 18:54:23] 2025-11-22 23:53:51,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:54:23] 2025-11-22 23:53:51,636 | INFO     | all payload control threads have been joined
[2025-11-22 18:54:23] 2025-11-22 23:53:52,015 | INFO     | all job control threads have been joined
[2025-11-22 18:54:23] 2025-11-22 23:53:52,028 | INFO     | all data control threads have been joined
[2025-11-22 18:54:23] 2025-11-22 23:53:52,191 | INFO     | [job] retrieve thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:52,191 | INFO     | [job] job monitor thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:52,192 | INFO     | [job] queue monitor thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:52,393 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 18:54:23] 2025-11-22 23:53:52,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 18:54:23] 2025-11-22 23:53:52,579 | INFO     | [payload] validate_post thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:52,642 | INFO     | [payload] control thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:52,715 | INFO     | [payload] failed_post thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:52,724 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:52,736 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:52,898 | INFO     | [data] copytool_in thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:53,020 | INFO     | [job] control thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:53,033 | INFO     | [data] control thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:53,062 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:53,205 | INFO     | [job] validate thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:53,486 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:54,402 | INFO     | [data] copytool_out thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:53:56,488 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 18:54:23] 2025-11-22 23:54:16,720 | INFO     | [monitor] cgroup control has ended
[2025-11-22 18:54:23] 2025-11-22 23:54:18,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140006627837760)>', '<ExcThread(monitor, started 140005968164608)>']
[2025-11-22 18:54:23] 2025-11-22 23:54:22,142 | INFO     | PID=3776822 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 18:54:23] 2025-11-22 23:54:22,142 | INFO     | .. there are 7 such processes running
[2025-11-22 18:54:23] 2025-11-22 23:54:22,142 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 18:54:23] 2025-11-22 23:54:22,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 18:54:23] 2025-11-22 23:54:22,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 18:54:23] 2025-11-22 23:54:22,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 18:54:23] 2025-11-22 23:54:22,142 | INFO     | [monitor] control thread has ended
[2025-11-22 18:54:23] 2025-11-22 23:54:23,273 | INFO     | all workflow threads have been joined
[2025-11-22 18:54:23] 2025-11-22 23:54:23,273 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 18:54:23] 2025-11-22 23:54:23,273 | INFO     | traces error code: 0
[2025-11-22 18:54:23] 2025-11-22 23:54:23,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 18:54:23] 2025-11-22 23:54:23,537 [wrapper] ==== pilot stdout END ====
[2025-11-22 18:54:23] 2025-11-22 23:54:23,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 18:54:23] 2025-11-22 23:54:23,544 [wrapper] pilotpid: 3776822
[2025-11-22 18:54:23] 2025-11-22 23:54:23,547 [wrapper] Pilot exit status: 0
[2025-11-22 18:54:23] 2025-11-22 23:54:23,598 [wrapper] pandaids: 6894247003
[2025-11-22 18:54:23] 2025-11-22 23:54:23,658 [wrapper] cleanup supervisor_pilot 2506597 3776823
[2025-11-22 18:54:23] 2025-11-22 23:54:23,663 [wrapper] Test setup, not cleaning
[2025-11-22 18:54:23] 2025-11-22 23:54:23,666 [wrapper] apfmon messages muted
[2025-11-22 18:54:23] 2025-11-22 23:54:23,670 [wrapper] ==== wrapper stdout END ====
[2025-11-22 18:54:23] 2025-11-22 23:54:23,673 [wrapper] ==== wrapper stderr END ====
[2025-11-22 18:54:23]  *** Error codes and diagnostics ***
[2025-11-22 18:54:23]     "exeErrorCode": 0,
[2025-11-22 18:54:23]     "exeErrorDiag": "",
[2025-11-22 18:54:23]     "pilotErrorCode": 0,
[2025-11-22 18:54:23]     "pilotErrorDiag": "",
[2025-11-22 18:54:23]  *** Listing of results directory ***
[2025-11-22 18:54:23] total 1321608
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 20:08 pilot3.tar.gz
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 20:34 queuedata.json
[2025-11-22 18:54:23] -rwx------. 1 boincer umatlas     36292 Nov 20 20:35 runpilot2-wrapper.sh
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas       100 Nov 21 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 18:54:23] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 09:35 run_atlas
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas       105 Nov 21 09:35 job.xml
[2025-11-22 18:54:23] -rw-r--r--. 2 boincer umatlas 408172632 Nov 21 09:35 EVNT.47493127._002095.pool.root.1
[2025-11-22 18:54:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 09:35 start_atlas.sh
[2025-11-22 18:54:23] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 09:35 shared
[2025-11-22 18:54:23] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 09:35 input.tar.gz
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas         0 Nov 21 09:35 boinc_lockfile
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas      2784 Nov 21 09:35 pandaJob.out
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas        57 Nov 21 09:35 setup.sh.local
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas    989798 Nov 21 09:35 agis_schedconf.cvmfs.json
[2025-11-22 18:54:23] drwx------. 5 boincer umatlas      4096 Nov 21 09:35 pilot3
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas       533 Nov 22 18:40 boinc_task_state.xml
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas      6661 Nov 22 18:46 init_data.xml
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas 905805506 Nov 22 18:52 HITS.47533967._000668.pool.root.1
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas      1067 Nov 22 18:53 memory_monitor_summary.json
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas   1526164 Nov 22 18:53 agis_ddmendpoints.agis.ALL.json
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas        95 Nov 22 18:53 pilot_heartbeat.json
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas   2789240 Nov 22 18:53 log.47533967._000668.job.log.tgz.1
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas      8631 Nov 22 18:53 heartbeat.json
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas        29 Nov 22 18:54 wrapper_checkpoint.txt
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 18:54 boinc_mmap_file
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas      4823 Nov 22 18:54 pilotlog.txt
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas  14922972 Nov 22 18:54 log.47533967._000668.job.log.1
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas       353 Nov 22 18:54 output.list
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas       620 Nov 22 18:54 runtime_log
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas  17735680 Nov 22 18:54 result.tar.gz
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas      9339 Nov 22 18:54 runtime_log.err
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas       664 Nov 22 18:54 ECsKDmEFVg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnoIKDma1HTFm.diag
[2025-11-22 18:54:23] -rw-r--r--. 1 boincer umatlas     21313 Nov 22 18:54 stderr.txt
[2025-11-22 18:54:23] HITS file was successfully produced:
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas 905805506 Nov 22 18:52 shared/HITS.pool.root.1
[2025-11-22 18:54:23]  *** Contents of shared directory: ***
[2025-11-22 18:54:23] total 1301104
[2025-11-22 18:54:23] -rw-r--r--. 2 boincer umatlas 408172632 Nov 21 09:35 ATLAS.root_0
[2025-11-22 18:54:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 09:35 start_atlas.sh
[2025-11-22 18:54:23] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 09:35 input.tar.gz
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas 905805506 Nov 22 18:52 HITS.pool.root.1
[2025-11-22 18:54:23] -rw-------. 1 boincer umatlas  17735680 Nov 22 18:54 result.tar.gz
18:54:25 (3773155): run_atlas exited; CPU time 295309.347028
18:54:25 (3773155): called boinc_finish(0)

</stderr_txt>
]]>

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