Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:09:37 (6161): wrapper (7.7.26015): starting
09:09:37 (6161): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 09:09:37] Arguments: --nthreads 8
[2025-11-21 09:09:37] Threads: 8
[2025-11-21 09:09:37] Checking for CVMFS
[2025-11-21 09:09:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 09:09:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 09:09:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 09:09:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 09:09:38] 2.11.2.0 2860 58615 81296 153129 0 82 19058356 20275200 1 130560 0 13646493 99.810 3732016 30053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 09:09:38] CVMFS is ok
[2025-11-21 09:09:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 09:09:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 09:09:38] Further information can be found at the LHC@home message board.
[2025-11-21 09:09:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 09:09:38] Checking for apptainer binary...
[2025-11-21 09:09:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 09:09:38] Running /usr/bin/apptainer --version
[2025-11-21 09:09:38] apptainer version 1.3.2-1.el7
[2025-11-21 09:09:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 09:09:39] c-204-9.aglt2.org
[2025-11-21 09:09:39] apptainer works
[2025-11-21 09:09:39] Set ATHENA_PROC_NUMBER=8
[2025-11-21 09:09:39] Set ATHENA_CORE_NUMBER=8
[2025-11-21 09:09:39] Starting ATLAS job with PandaID=6894273690
[2025-11-21 09:09:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 23:07:46]  *** The last 200 lines of the pilot log: ***
[2025-11-21 23:07:46] 2025-11-22 04:07:11,094 | INFO     | time since job start (50234s) is within the limit (172800.0s)
[2025-11-21 23:07:46] 2025-11-22 04:07:12,716 | INFO     | monitor loop #3718: job 0:6894273690 is in state 'finished'
[2025-11-21 23:07:46] 2025-11-22 04:07:12,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,095 | INFO     | time since job start (50236s) is within the limit (172800.0s)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,481 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 23:07:46] 2025-11-22 04:07:13,484 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-21 23:07:46] 2025-11-22 04:07:13,486 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894273690/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,487 | INFO     | extracted standard info from prmon json
[2025-11-21 23:07:46] 2025-11-22 04:07:13,487 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 23:07:46] 2025-11-22 04:07:13,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 23:07:46] 2025-11-22 04:07:13,502 | INFO     | fitting pss+swap vs Time
[2025-11-21 23:07:46] 2025-11-22 04:07:13,503 | INFO     | sum of square deviations: 172853073715.8786
[2025-11-21 23:07:46] 2025-11-22 04:07:13,518 | INFO     | sum of deviations: 1062849598584.4205
[2025-11-21 23:07:46] 2025-11-22 04:07:13,518 | INFO     | mean x: 1763759300.0121508
[2025-11-21 23:07:46] 2025-11-22 04:07:13,518 | INFO     | mean y: 2868438.1579586877
[2025-11-21 23:07:46] 2025-11-22 04:07:13,518 | INFO     | intersect: -10842243099.16293
[2025-11-21 23:07:46] 2025-11-22 04:07:13,519 | INFO     | chi2: 5.475285541349858
[2025-11-21 23:07:46] 2025-11-22 04:07:13,520 | INFO     | sum of square deviations: 169721752938.37753
[2025-11-21 23:07:46] 2025-11-22 04:07:13,534 | INFO     | sum of deviations: 1305929947518.1685
[2025-11-21 23:07:46] 2025-11-22 04:07:13,534 | INFO     | mean x: 1763759147.512225
[2025-11-21 23:07:46] 2025-11-22 04:07:13,534 | INFO     | mean y: 2880272.0831295843
[2025-11-21 23:07:46] 2025-11-22 04:07:13,535 | INFO     | intersect: -13568426004.618048
[2025-11-21 23:07:46] 2025-11-22 04:07:13,536 | INFO     | chi2: 2.9220391445909812
[2025-11-21 23:07:46] 2025-11-22 04:07:13,536 | INFO     | current chi2=2.9220391445909812 (change=46.63220534301866 %)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,537 | INFO     | sum of square deviations: 166628479385.87686
[2025-11-21 23:07:46] 2025-11-22 04:07:13,551 | INFO     | sum of deviations: 1405430768539.9883
[2025-11-21 23:07:46] 2025-11-22 04:07:13,551 | INFO     | mean x: 1763758995.0123
[2025-11-21 23:07:46] 2025-11-22 04:07:13,551 | INFO     | mean y: 2885174.3013530136
[2025-11-21 23:07:46] 2025-11-22 04:07:13,551 | INFO     | intersect: -14873570333.27712
[2025-11-21 23:07:46] 2025-11-22 04:07:13,552 | INFO     | chi2: 2.382711857522984
[2025-11-21 23:07:46] 2025-11-22 04:07:13,552 | INFO     | current chi2=2.382711857522984 (change=18.457223205457453 %)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,552 | INFO     | right removable region: 812
[2025-11-21 23:07:46] 2025-11-22 04:07:13,553 | INFO     | sum of square deviations: 169721746838.37753
[2025-11-21 23:07:46] 2025-11-22 04:07:13,568 | INFO     | sum of deviations: 846176769362.8872
[2025-11-21 23:07:46] 2025-11-22 04:07:13,568 | INFO     | mean x: 1763759452.512225
[2025-11-21 23:07:46] 2025-11-22 04:07:13,568 | INFO     | mean y: 2878974.6613691933
[2025-11-21 23:07:46] 2025-11-22 04:07:13,568 | INFO     | intersect: -8790645150.925673
[2025-11-21 23:07:46] 2025-11-22 04:07:13,569 | INFO     | chi2: 3.40173668594822
[2025-11-21 23:07:46] 2025-11-22 04:07:13,569 | INFO     | current chi2=3.40173668594822 (change=37.87106333983875 %)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,570 | INFO     | sum of square deviations: 166628467185.8769
[2025-11-21 23:07:46] 2025-11-22 04:07:13,585 | INFO     | sum of deviations: 789498425466.7869
[2025-11-21 23:07:46] 2025-11-22 04:07:13,585 | INFO     | mean x: 1763759605.0123
[2025-11-21 23:07:46] 2025-11-22 04:07:13,585 | INFO     | mean y: 2881769.221402214
[2025-11-21 23:07:46] 2025-11-22 04:07:13,585 | INFO     | intersect: -8353946176.064751
[2025-11-21 23:07:46] 2025-11-22 04:07:13,586 | INFO     | chi2: 3.33665021215625
[2025-11-21 23:07:46] 2025-11-22 04:07:13,586 | INFO     | current chi2=3.33665021215625 (change=1.9133307425241675 %)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,586 | INFO     | left removable region: 20
[2025-11-21 23:07:46] 2025-11-22 04:07:13,587 | INFO     | sum of square deviations: 154046933291.87363
[2025-11-21 23:07:46] 2025-11-22 04:07:13,601 | INFO     | sum of deviations: 1054016993174.4917
[2025-11-21 23:07:46] 2025-11-22 04:07:13,601 | INFO     | mean x: 1763759574.5126262
[2025-11-21 23:07:46] 2025-11-22 04:07:13,601 | INFO     | mean y: 2903912.7007575757
[2025-11-21 23:07:46] 2025-11-22 04:07:13,601 | INFO     | intersect: -12065058257.556791
[2025-11-21 23:07:46] 2025-11-22 04:07:13,602 | INFO     | chi2: 0.14696985062480614
[2025-11-21 23:07:46] 2025-11-22 04:07:13,602 | INFO     | current memory leak: 6.84 B/s (using 792 data points, chi2=0.15)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,603 | INFO     | could have reported an average CPU frequency of 2175 MHz (31 samples)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,603 | INFO     | ..............................
[2025-11-21 23:07:46] 2025-11-22 04:07:13,603 | INFO     | . Timing measurements:
[2025-11-21 23:07:46] 2025-11-22 04:07:13,604 | INFO     | . get job = 0 s
[2025-11-21 23:07:46] 2025-11-22 04:07:13,604 | INFO     | . initial setup = 2 s
[2025-11-21 23:07:46] 2025-11-22 04:07:13,604 | INFO     | . payload setup = 9 s
[2025-11-21 23:07:46] 2025-11-22 04:07:13,604 | INFO     | . stage-in = 0 s
[2025-11-21 23:07:46] 2025-11-22 04:07:13,604 | INFO     | . payload execution = 50192 s
[2025-11-21 23:07:46] 2025-11-22 04:07:13,604 | INFO     | . stage-out = 3 s
[2025-11-21 23:07:46] 2025-11-22 04:07:13,604 | INFO     | . log creation = 0 s
[2025-11-21 23:07:46] 2025-11-22 04:07:13,604 | INFO     | ..............................
[2025-11-21 23:07:46] 2025-11-22 04:07:13,700 | INFO     | 
[2025-11-21 23:07:46] 2025-11-22 04:07:13,700 | INFO     | job summary report
[2025-11-21 23:07:46] 2025-11-22 04:07:13,700 | INFO     | --------------------------------------------------
[2025-11-21 23:07:46] 2025-11-22 04:07:13,700 | INFO     | PanDA job id: 6894273690
[2025-11-21 23:07:46] 2025-11-22 04:07:13,701 | INFO     | task id: 47533967
[2025-11-21 23:07:46] 2025-11-22 04:07:13,701 | INFO     | errors: (none)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 23:07:46] 2025-11-22 04:07:13,701 | INFO     | pilot state: finished 
[2025-11-21 23:07:46] 2025-11-22 04:07:13,701 | INFO     | transexitcode: 0
[2025-11-21 23:07:46] 2025-11-22 04:07:13,701 | INFO     | exeerrorcode: 0
[2025-11-21 23:07:46] 2025-11-22 04:07:13,702 | INFO     | exeerrordiag: 
[2025-11-21 23:07:46] 2025-11-22 04:07:13,702 | INFO     | exitcode: 0
[2025-11-21 23:07:46] 2025-11-22 04:07:13,702 | INFO     | exitmsg: OK
[2025-11-21 23:07:46] 2025-11-22 04:07:13,702 | INFO     | cpuconsumptiontime: 369869 s
[2025-11-21 23:07:46] 2025-11-22 04:07:13,702 | INFO     | nevents: 1000
[2025-11-21 23:07:46] 2025-11-22 04:07:13,702 | INFO     | neventsw: 0
[2025-11-21 23:07:46] 2025-11-22 04:07:13,702 | INFO     | pid: 16409
[2025-11-21 23:07:46] 2025-11-22 04:07:13,703 | INFO     | pgrp: 16409
[2025-11-21 23:07:46] 2025-11-22 04:07:13,703 | INFO     | corecount: 8
[2025-11-21 23:07:46] 2025-11-22 04:07:13,703 | INFO     | event service: False
[2025-11-21 23:07:46] 2025-11-22 04:07:13,703 | INFO     | sizes: {0: 2298807, 6: 2299069, 11: 2299097, 50205: 2347694, 50210: 2356688, 50213: 2356744, 50219: 2357118}
[2025-11-21 23:07:46] 2025-11-22 04:07:13,703 | INFO     | --------------------------------------------------
[2025-11-21 23:07:46] 2025-11-22 04:07:13,703 | INFO     | 
[2025-11-21 23:07:46] 2025-11-22 04:07:13,703 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 23:07:46] 2025-11-22 04:07:13,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,734 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,734 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,734 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,734 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,734 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,734 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,735 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 23:07:46] 2025-11-22 04:07:13,735 | INFO     | job 6894273690 has completed (purged errors)
[2025-11-21 23:07:46] 2025-11-22 04:07:13,735 | INFO     | overall cleanup function is called
[2025-11-21 23:07:46] 2025-11-22 04:07:14,751 | INFO     | --- collectZombieJob: --- 10, [16409]
[2025-11-21 23:07:46] 2025-11-22 04:07:14,751 | INFO     | zombie collector waiting for pid 16409
[2025-11-21 23:07:46] 2025-11-22 04:07:14,751 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 23:07:46] 2025-11-22 04:07:14,751 | INFO     | collected zombie processes
[2025-11-21 23:07:46] 2025-11-22 04:07:14,752 | INFO     | will attempt to kill all subprocesses of pid=16409
[2025-11-21 23:07:46] 2025-11-22 04:07:14,846 | INFO     | process IDs to be killed: [16409] (in reverse order)
[2025-11-21 23:07:46] 2025-11-22 04:07:14,905 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 23:07:46] 2025-11-22 04:07:14,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 23:07:46] 2025-11-22 04:07:14,912 | INFO     | did not find any defunct processes belonging to 16409
[2025-11-21 23:07:46] 2025-11-22 04:07:14,915 | INFO     | did not find any defunct processes belonging to 16409
[2025-11-21 23:07:46] 2025-11-22 04:07:14,918 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 23:07:46] 2025-11-22 04:07:14,918 | INFO     | ready for new job
[2025-11-21 23:07:46] 2025-11-22 04:07:14,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 23:07:46] 2025-11-22 04:07:14,923 | INFO     | ***************************************
[2025-11-21 23:07:46] 2025-11-22 04:07:14,923 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 23:07:46] 2025-11-22 04:07:14,924 | INFO     | ***************************************
[2025-11-21 23:07:46] 2025-11-22 04:07:14,924 | INFO     | 
[2025-11-21 23:07:46] 2025-11-22 04:07:14,924 | INFO     | architecture information:
[2025-11-21 23:07:46] 2025-11-22 04:07:14,925 | INFO     | executing command: cat /etc/os-release
[2025-11-21 23:07:46] 2025-11-22 04:07:14,943 | INFO     | cat /etc/os-release:
[2025-11-21 23:07:46] NAME="CentOS Linux"
[2025-11-21 23:07:46] VERSION="7 (Core)"
[2025-11-21 23:07:46] ID="centos"
[2025-11-21 23:07:46] ID_LIKE="rhel fedora"
[2025-11-21 23:07:46] VERSION_ID="7"
[2025-11-21 23:07:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 23:07:46] ANSI_COLOR="0;31"
[2025-11-21 23:07:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 23:07:46] HOME_URL="https://www.centos.org/"
[2025-11-21 23:07:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 23:07:46] 
[2025-11-21 23:07:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 23:07:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 23:07:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 23:07:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 23:07:46] 
[2025-11-21 23:07:46] 2025-11-22 04:07:14,944 | INFO     | ***************************************
[2025-11-21 23:07:46] 2025-11-22 04:07:15,447 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 23:07:46] 2025-11-22 04:07:15,534 | INFO     | sufficient remaining disk space (17471373312 B)
[2025-11-21 23:07:46] 2025-11-22 04:07:15,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 23:07:46] 2025-11-22 04:07:15,535 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 23:07:46] 2025-11-22 04:07:15,535 | INFO     | update_server=False
[2025-11-21 23:07:46] 2025-11-22 04:07:15,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 23:07:46] 2025-11-22 04:07:15,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:07:46] 2025-11-22 04:07:15,626 | INFO     | all job control threads have been joined
[2025-11-21 23:07:46] 2025-11-22 04:07:15,735 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 23:07:46] 2025-11-22 04:07:16,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:07:46] 2025-11-22 04:07:16,231 | INFO     | aborting loop
[2025-11-21 23:07:46] 2025-11-22 04:07:16,255 | INFO     | all payload control threads have been joined
[2025-11-21 23:07:46] 2025-11-22 04:07:16,336 | INFO     | all data control threads have been joined
[2025-11-21 23:07:46] 2025-11-22 04:07:16,540 | INFO     | [job] queue monitor thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:16,541 | INFO     | [job] retrieve thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:16,631 | INFO     | [job] control thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:16,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:16,929 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,108 | INFO     | [job] validate thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,136 | INFO     | [payload] validate_post thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,180 | INFO     | [payload] failed_post thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,233 | INFO     | [job] job monitor thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,260 | INFO     | [payload] control thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,341 | INFO     | [data] control thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,425 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,546 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,621 | INFO     | [data] copytool_in thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,740 | INFO     | [data] copytool_out thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:17,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 23:07:46] 2025-11-22 04:07:18,243 | INFO     | [monitor] cgroup control has ended
[2025-11-21 23:07:46] 2025-11-22 04:07:21,980 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 23:07:46] 2025-11-22 04:07:22,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139654104991552)>', '<ExcThread(monitor, started 139653512410880)>']
[2025-11-21 23:07:46] 2025-11-22 04:07:27,507 | INFO     | all workflow threads have been joined
[2025-11-21 23:07:46] 2025-11-22 04:07:27,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 23:07:46] 2025-11-22 04:07:27,508 | INFO     | traces error code: 0
[2025-11-21 23:07:46] 2025-11-22 04:07:27,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 23:07:46] 2025-11-22 04:07:46,303 | INFO     | PID=9840 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 23:07:46] 2025-11-22 04:07:46,304 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 23:07:46] 2025-11-22 04:07:46,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 23:07:46] 2025-11-22 04:07:46,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 23:07:46] 2025-11-22 04:07:46,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 23:07:46] 2025-11-22 04:07:46,305 | INFO     | [monitor] control thread has ended
[2025-11-21 23:07:46] 2025-11-22 04:07:46,420 [wrapper] ==== pilot stdout END ====
[2025-11-21 23:07:46] 2025-11-22 04:07:46,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 23:07:46] 2025-11-22 04:07:46,428 [wrapper] pilotpid: 9840
[2025-11-21 23:07:46] 2025-11-22 04:07:46,432 [wrapper] Pilot exit status: 0
[2025-11-21 23:07:46] 2025-11-22 04:07:46,445 [wrapper] pandaids: 6894273690
[2025-11-21 23:07:46] 2025-11-22 04:07:46,492 [wrapper] cleanup supervisor_pilot  1687 9841
[2025-11-21 23:07:46] 2025-11-22 04:07:46,497 [wrapper] Test setup, not cleaning
[2025-11-21 23:07:46] 2025-11-22 04:07:46,502 [wrapper] apfmon messages muted
[2025-11-21 23:07:46] 2025-11-22 04:07:46,508 [wrapper] ==== wrapper stdout END ====
[2025-11-21 23:07:46] 2025-11-22 04:07:46,513 [wrapper] ==== wrapper stderr END ====
[2025-11-21 23:07:46]  *** Error codes and diagnostics ***
[2025-11-21 23:07:46]     "exeErrorCode": 0,
[2025-11-21 23:07:46]     "exeErrorDiag": "",
[2025-11-21 23:07:46]     "pilotErrorCode": 0,
[2025-11-21 23:07:46]     "pilotErrorDiag": "",
[2025-11-21 23:07:46]  *** Listing of results directory ***
[2025-11-21 23:07:46] total 1317156
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 02:07 pilot3.tar.gz
[2025-11-21 23:07:46] -rwx------ 1 boincer umatlas     36292 Nov 21 02:18 runpilot2-wrapper.sh
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 02:18 queuedata.json
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas       100 Nov 21 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 23:07:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 09:09 run_atlas
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas       105 Nov 21 09:09 job.xml
[2025-11-21 23:07:46] -rw-r--r-- 2 boincer umatlas 407673331 Nov 21 09:09 EVNT.47493127._002294.pool.root.1
[2025-11-21 23:07:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 09:09 start_atlas.sh
[2025-11-21 23:07:46] drwxrwx--x 2 boincer umatlas      4096 Nov 21 09:09 shared
[2025-11-21 23:07:46] -rw-r--r-- 2 boincer umatlas    590101 Nov 21 09:09 input.tar.gz
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas         0 Nov 21 09:09 boinc_lockfile
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas      2786 Nov 21 09:09 pandaJob.out
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas        57 Nov 21 09:09 setup.sh.local
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas    989817 Nov 21 09:09 agis_schedconf.cvmfs.json
[2025-11-21 23:07:46] drwx------ 5 boincer umatlas      4096 Nov 21 09:09 pilot3
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas       532 Nov 21 22:54 boinc_task_state.xml
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas      5911 Nov 21 23:04 init_data.xml
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas 919130997 Nov 21 23:06 HITS.47533967._002659.pool.root.1
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas      1065 Nov 21 23:06 memory_monitor_summary.json
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas   1526164 Nov 21 23:07 agis_ddmendpoints.agis.ALL.json
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas   2065136 Nov 21 23:07 log.47533967._002659.job.log.tgz.1
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas      8659 Nov 21 23:07 heartbeat.json
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas        29 Nov 21 23:07 wrapper_checkpoint.txt
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 23:07 boinc_mmap_file
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas        95 Nov 21 23:07 pilot_heartbeat.json
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas       744 Nov 21 23:07 pilotlog.txt
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas   6954090 Nov 21 23:07 log.47533967._002659.job.log.1
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas       353 Nov 21 23:07 output.list
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas       620 Nov 21 23:07 runtime_log
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas   9041920 Nov 21 23:07 result.tar.gz
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas      9338 Nov 21 23:07 runtime_log.err
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas       669 Nov 21 23:07 oyEMDmQaag8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlQHKDmfIpNsn.diag
[2025-11-21 23:07:46] -rw-r--r-- 1 boincer umatlas     21289 Nov 21 23:07 stderr.txt
[2025-11-21 23:07:46] HITS file was successfully produced:
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas 919130997 Nov 21 23:06 shared/HITS.pool.root.1
[2025-11-21 23:07:46]  *** Contents of shared directory: ***
[2025-11-21 23:07:46] total 1305144
[2025-11-21 23:07:46] -rw-r--r-- 2 boincer umatlas 407673331 Nov 21 09:09 ATLAS.root_0
[2025-11-21 23:07:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 09:09 start_atlas.sh
[2025-11-21 23:07:46] -rw-r--r-- 2 boincer umatlas    590101 Nov 21 09:09 input.tar.gz
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas 919130997 Nov 21 23:06 HITS.pool.root.1
[2025-11-21 23:07:46] -rw------- 1 boincer umatlas   9041920 Nov 21 23:07 result.tar.gz
23:07:48 (6161): run_atlas exited; CPU time 359659.735930
23:07:48 (6161): called boinc_finish(0)

</stderr_txt>
]]>

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