Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
08:05:40 (811998): wrapper (7.7.26015): starting
08:05:40 (811998): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 08:05:40] Arguments: --nthreads 4
[2025-11-21 08:05:40] Threads: 4
[2025-11-21 08:05:40] Checking for CVMFS
[2025-11-21 08:05:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 08:05:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 08:05:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 08:05:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 08:05:41] 2.13.3.0 729851 434 43204 153129 2 81 1559321 4096000 0 130560 0 173264 99.974 19675 1111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-21 08:05:41] CVMFS is ok
[2025-11-21 08:05:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 08:05:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 08:05:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 08:05:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 08:05:41] Further information can be found at the LHC@home message board.
[2025-11-21 08:05:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 08:05:41] Checking for apptainer binary...
[2025-11-21 08:05:41] apptainer is not installed, using version from CVMFS
[2025-11-21 08:05:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 08:05:41] yy
[2025-11-21 08:05:41] apptainer works
[2025-11-21 08:05:41] Set ATHENA_PROC_NUMBER=4
[2025-11-21 08:05:41] Set ATHENA_CORE_NUMBER=4
[2025-11-21 08:05:41] Starting ATLAS job with PandaID=6894247005
[2025-11-21 08:05:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 15:25:31]  *** The last 200 lines of the pilot log: ***
[2025-11-21 15:25:31] 2025-11-21 21:24:34,820 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 15:25:31] 2025-11-21 21:24:34,822 | INFO     | found 48 cores (48 cores per socket, 1 socket) , CPU MHz: 2494.138000000002
[2025-11-21 15:25:31] 2025-11-21 21:24:34,825 | INFO     | using path: /data/boinc/slots/0/PanDA_Pilot-6894247005/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,825 | INFO     | extracted standard info from prmon json
[2025-11-21 15:25:31] 2025-11-21 21:24:34,825 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 15:25:31] 2025-11-21 21:24:34,825 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 15:25:31] 2025-11-21 21:24:34,828 | INFO     | fitting pss+swap vs Time
[2025-11-21 15:25:31] 2025-11-21 21:24:34,829 | INFO     | sum of square deviations: 24999270588.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,830 | INFO     | sum of deviations: 126519837791.5
[2025-11-21 15:25:31] 2025-11-21 21:24:34,830 | INFO     | mean x: 1763747114.5
[2025-11-21 15:25:31] 2025-11-21 21:24:34,830 | INFO     | mean y: 2289312.7106481483
[2025-11-21 15:25:31] 2025-11-21 21:24:34,830 | INFO     | intersect: -8923931076.250654
[2025-11-21 15:25:31] 2025-11-21 21:24:34,831 | INFO     | chi2: 3.2370514877961765
[2025-11-21 15:25:31] 2025-11-21 21:24:34,831 | INFO     | sum of square deviations: 24141245198.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,833 | INFO     | sum of deviations: 194059515574.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,833 | INFO     | mean x: 1763746962.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,833 | INFO     | mean y: 2301256.8220140515
[2025-11-21 15:25:31] 2025-11-21 21:24:34,833 | INFO     | intersect: -14175587175.759333
[2025-11-21 15:25:31] 2025-11-21 21:24:34,833 | INFO     | chi2: 1.4881298318955742
[2025-11-21 15:25:31] 2025-11-21 21:24:34,833 | INFO     | current chi2=1.4881298318955742 (change=54.02823101498731 %)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,833 | INFO     | sum of square deviations: 23303080645.5
[2025-11-21 15:25:31] 2025-11-21 21:24:34,835 | INFO     | sum of deviations: 190331769401.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,835 | INFO     | mean x: 1763746809.5
[2025-11-21 15:25:31] 2025-11-21 21:24:34,835 | INFO     | mean y: 2300578.5734597156
[2025-11-21 15:25:31] 2025-11-21 21:24:34,835 | INFO     | intersect: -14403393506.870522
[2025-11-21 15:25:31] 2025-11-21 21:24:34,835 | INFO     | chi2: 1.4873259307622202
[2025-11-21 15:25:31] 2025-11-21 21:24:34,835 | INFO     | current chi2=1.4873259307622202 (change=0.05402090033569446 %)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,835 | INFO     | right removable region: 421
[2025-11-21 15:25:31] 2025-11-21 21:24:34,835 | INFO     | sum of square deviations: 24141245198.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,837 | INFO     | sum of deviations: 66243902881.00002
[2025-11-21 15:25:31] 2025-11-21 21:24:34,837 | INFO     | mean x: 1763747267.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,837 | INFO     | mean y: 2299964.4800936766
[2025-11-21 15:25:31] 2025-11-21 21:24:34,837 | INFO     | intersect: -4837446357.779071
[2025-11-21 15:25:31] 2025-11-21 21:24:34,837 | INFO     | chi2: 1.8144999999692022
[2025-11-21 15:25:31] 2025-11-21 21:24:34,837 | INFO     | current chi2=1.8144999999692022 (change=43.94590241119286 %)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,838 | INFO     | sum of square deviations: 23303080645.5
[2025-11-21 15:25:31] 2025-11-21 21:24:34,839 | INFO     | sum of deviations: 66236931495.99992
[2025-11-21 15:25:31] 2025-11-21 21:24:34,839 | INFO     | mean x: 1763747419.5
[2025-11-21 15:25:31] 2025-11-21 21:24:34,839 | INFO     | mean y: 2299964.4265402844
[2025-11-21 15:25:31] 2025-11-21 21:24:34,839 | INFO     | intersect: -5010995006.263438
[2025-11-21 15:25:31] 2025-11-21 21:24:34,840 | INFO     | chi2: 1.8117025991701592
[2025-11-21 15:25:31] 2025-11-21 21:24:34,840 | INFO     | current chi2=1.8117025991701592 (change=0.1541692366542014 %)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,840 | INFO     | left removable region: 20
[2025-11-21 15:25:31] 2025-11-21 21:24:34,840 | INFO     | sum of square deviations: 19994421400.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,841 | INFO     | sum of deviations: 109810896979.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,841 | INFO     | mean x: 1763747389.0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,841 | INFO     | mean y: 2315518.847880299
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | intersect: -9684320516.0643
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | chi2: 0.026870274835677933
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | current memory leak: 5.49 B/s (using 401 data points, chi2=0.03)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | could have reported an average CPU frequency of 2494 MHz (18 samples)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | ..............................
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | . Timing measurements:
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | . get job = 0 s
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | . initial setup = 2 s
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | . payload setup = 3 s
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | . stage-in = 0 s
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | . payload execution = 26295 s
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | . stage-out = 3 s
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | . log creation = 0 s
[2025-11-21 15:25:31] 2025-11-21 21:24:34,842 | INFO     | ..............................
[2025-11-21 15:25:31] 2025-11-21 21:24:34,877 | INFO     | 
[2025-11-21 15:25:31] 2025-11-21 21:24:34,877 | INFO     | job summary report
[2025-11-21 15:25:31] 2025-11-21 21:24:34,877 | INFO     | --------------------------------------------------
[2025-11-21 15:25:31] 2025-11-21 21:24:34,877 | INFO     | PanDA job id: 6894247005
[2025-11-21 15:25:31] 2025-11-21 21:24:34,877 | INFO     | task id: 47533967
[2025-11-21 15:25:31] 2025-11-21 21:24:34,877 | INFO     | errors: (none)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,877 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | pilot state: finished 
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | transexitcode: 0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | exeerrorcode: 0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | exeerrordiag: 
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | exitcode: 0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | exitmsg: OK
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | cpuconsumptiontime: 104342 s
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | nevents: 1000
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | neventsw: 0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | pid: 822657
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | pgrp: 822657
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | corecount: 4
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | event service: False
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | sizes: {0: 2298801, 3: 2299063, 11: 2299091, 26303: 2336602, 26307: 2345646, 26312: 2345836}
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | --------------------------------------------------
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | 
[2025-11-21 15:25:31] 2025-11-21 21:24:34,878 | INFO     | executing command: ls -lF /data/boinc/slots/0
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 15:25:31] 2025-11-21 21:24:34,891 | INFO     | job 6894247005 has completed (purged errors)
[2025-11-21 15:25:31] 2025-11-21 21:24:34,892 | INFO     | overall cleanup function is called
[2025-11-21 15:25:31] 2025-11-21 21:24:35,900 | INFO     | --- collectZombieJob: --- 10, [822657]
[2025-11-21 15:25:31] 2025-11-21 21:24:35,900 | INFO     | zombie collector waiting for pid 822657
[2025-11-21 15:25:31] 2025-11-21 21:24:35,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 15:25:31] 2025-11-21 21:24:35,900 | INFO     | collected zombie processes
[2025-11-21 15:25:31] 2025-11-21 21:24:35,900 | INFO     | will attempt to kill all subprocesses of pid=822657
[2025-11-21 15:25:31] 2025-11-21 21:24:35,984 | INFO     | process IDs to be killed: [822657] (in reverse order)
[2025-11-21 15:25:31] 2025-11-21 21:24:36,014 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 15:25:31] 2025-11-21 21:24:36,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 15:25:31] 2025-11-21 21:24:36,016 | INFO     | did not find any defunct processes belonging to 822657
[2025-11-21 15:25:31] 2025-11-21 21:24:36,018 | INFO     | did not find any defunct processes belonging to 822657
[2025-11-21 15:25:31] 2025-11-21 21:24:36,019 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 15:25:31] 2025-11-21 21:24:36,019 | INFO     | ready for new job
[2025-11-21 15:25:31] 2025-11-21 21:24:36,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 15:25:31] 2025-11-21 21:24:36,020 | INFO     | ***************************************
[2025-11-21 15:25:31] 2025-11-21 21:24:36,021 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 15:25:31] 2025-11-21 21:24:36,021 | INFO     | ***************************************
[2025-11-21 15:25:31] 2025-11-21 21:24:36,021 | INFO     | 
[2025-11-21 15:25:31] 2025-11-21 21:24:36,022 | INFO     | pilot is running in a VM
[2025-11-21 15:25:31] 2025-11-21 21:24:36,022 | INFO     | architecture information:
[2025-11-21 15:25:31] 2025-11-21 21:24:36,022 | INFO     | executing command: cat /etc/os-release
[2025-11-21 15:25:31] 2025-11-21 21:24:36,030 | INFO     | cat /etc/os-release:
[2025-11-21 15:25:31] NAME="CentOS Linux"
[2025-11-21 15:25:31] VERSION="7 (Core)"
[2025-11-21 15:25:31] ID="centos"
[2025-11-21 15:25:31] ID_LIKE="rhel fedora"
[2025-11-21 15:25:31] VERSION_ID="7"
[2025-11-21 15:25:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 15:25:31] ANSI_COLOR="0;31"
[2025-11-21 15:25:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 15:25:31] HOME_URL="https://www.centos.org/"
[2025-11-21 15:25:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 15:25:31] 
[2025-11-21 15:25:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 15:25:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 15:25:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 15:25:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 15:25:31] 
[2025-11-21 15:25:31] 2025-11-21 21:24:36,030 | INFO     | ***************************************
[2025-11-21 15:25:31] 2025-11-21 21:24:36,533 | INFO     | executing command: df -mP /data/boinc/slots/0
[2025-11-21 15:25:31] 2025-11-21 21:24:36,542 | INFO     | sufficient remaining disk space (949866201088 B)
[2025-11-21 15:25:31] 2025-11-21 21:24:36,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 15:25:31] 2025-11-21 21:24:36,543 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 15:25:31] 2025-11-21 21:24:36,543 | INFO     | update_server=False
[2025-11-21 15:25:31] 2025-11-21 21:24:36,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 15:25:31] 2025-11-21 21:24:36,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 15:25:31] 2025-11-21 21:24:36,864 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 15:25:31] 2025-11-21 21:24:36,864 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 15:25:31] 2025-11-21 21:24:36,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 15:25:31] 2025-11-21 21:24:36,864 | INFO     | will abort loop
[2025-11-21 15:25:31] 2025-11-21 21:24:37,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 15:25:31] 2025-11-21 21:24:37,361 | INFO     | all data control threads have been joined
[2025-11-21 15:25:31] 2025-11-21 21:24:37,548 | INFO     | [job] retrieve thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:37,548 | INFO     | [job] queue monitor thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:37,767 | INFO     | [payload] failed_post thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:37,869 | INFO     | [job] job monitor thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:37,957 | INFO     | all job control threads have been joined
[2025-11-21 15:25:31] 2025-11-21 21:24:38,016 | INFO     | all payload control threads have been joined
[2025-11-21 15:25:31] 2025-11-21 21:24:38,111 | INFO     | [data] copytool_in thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:38,162 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:38,366 | INFO     | [data] control thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:38,495 | INFO     | [job] validate thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:38,497 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:38,533 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:38,962 | INFO     | [job] control thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:39,000 | INFO     | [payload] validate_post thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:39,021 | INFO     | [payload] control thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:39,149 | INFO     | [data] copytool_out thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:39,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 15:25:31] 2025-11-21 21:24:43,678 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:24:46,980 | INFO     | job.realtimelogging is not enabled
[2025-11-21 15:25:31] 2025-11-21 21:24:47,985 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 15:25:31] 2025-11-21 21:25:06,297 | INFO     | PID=815885 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 15:25:31] 2025-11-21 21:25:06,297 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 15:25:31] 2025-11-21 21:25:06,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 15:25:31] 2025-11-21 21:25:06,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 15:25:31] 2025-11-21 21:25:24,734 | INFO     | [monitor] cgroup control has ended
[2025-11-21 15:25:31] 2025-11-21 21:25:26,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127128557262656)>', '<ExcThread(monitor, started 127127710054144)>']
[2025-11-21 15:25:31] 2025-11-21 21:25:27,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 15:25:31] 2025-11-21 21:25:27,406 | INFO     | [monitor] control thread has ended
[2025-11-21 15:25:31] 2025-11-21 21:25:31,470 | INFO     | all workflow threads have been joined
[2025-11-21 15:25:31] 2025-11-21 21:25:31,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 15:25:31] 2025-11-21 21:25:31,470 | INFO     | traces error code: 0
[2025-11-21 15:25:31] 2025-11-21 21:25:31,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 15:25:31] 2025-11-21 21:25:31,529 [wrapper] ==== pilot stdout END ====
[2025-11-21 15:25:31] 2025-11-21 21:25:31,531 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 15:25:31] 2025-11-21 21:25:31,533 [wrapper] pilotpid: 815885
[2025-11-21 15:25:31] 2025-11-21 21:25:31,534 [wrapper] Pilot exit status: 0
[2025-11-21 15:25:31] 2025-11-21 21:25:31,541 [wrapper] pandaids: 6894247005
[2025-11-21 15:25:31] 2025-11-21 21:25:31,562 [wrapper] cleanup supervisor_pilot  891343 815886
[2025-11-21 15:25:31] 2025-11-21 21:25:31,565 [wrapper] Test setup, not cleaning
[2025-11-21 15:25:31] 2025-11-21 21:25:31,566 [wrapper] apfmon messages muted
[2025-11-21 15:25:31] 2025-11-21 21:25:31,568 [wrapper] ==== wrapper stdout END ====
[2025-11-21 15:25:31] 2025-11-21 21:25:31,570 [wrapper] ==== wrapper stderr END ====
[2025-11-21 15:25:31]  *** Error codes and diagnostics ***
[2025-11-21 15:25:31]     "exeErrorCode": 0,
[2025-11-21 15:25:31]     "exeErrorDiag": "",
[2025-11-21 15:25:31]     "pilotErrorCode": 0,
[2025-11-21 15:25:31]     "pilotErrorDiag": "",
[2025-11-21 15:25:31]  *** Listing of results directory ***
[2025-11-21 15:25:31] total 1297044
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc    576529 Nov 20 19:08 pilot3.tar.gz
[2025-11-21 15:25:31] -rwx------ 1 boinc boinc     36292 Nov 20 19:36 runpilot2-wrapper.sh
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc      5112 Nov 20 19:36 queuedata.json
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc       100 Nov 21 08:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 15:25:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 08:05 run_atlas
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc       105 Nov 21 08:05 job.xml
[2025-11-21 15:25:31] -rw-r--r-- 2 boinc boinc 408172632 Nov 21 08:05 EVNT.47493127._002095.pool.root.1
[2025-11-21 15:25:31] -rw-r--r-- 2 boinc boinc    590105 Nov 21 08:05 input.tar.gz
[2025-11-21 15:25:31] -rw-r--r-- 2 boinc boinc     15847 Nov 21 08:05 start_atlas.sh
[2025-11-21 15:25:31] drwxrwx--x 2 boinc boinc      4096 Nov 21 08:05 shared
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc         0 Nov 21 08:05 boinc_setup_complete
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc      6059 Nov 21 08:05 init_data.xml
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc         0 Nov 21 08:05 boinc_lockfile
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc      2784 Nov 21 08:05 pandaJob.out
[2025-11-21 15:25:31] -rw------- 1 boinc boinc    989817 Nov 21 08:05 agis_schedconf.cvmfs.json
[2025-11-21 15:25:31] drwx------ 5 boinc boinc      4096 Nov 21 08:05 pilot3
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc       532 Nov 21 15:20 boinc_task_state.xml
[2025-11-21 15:25:31] -rw------- 1 boinc boinc 906222791 Nov 21 15:24 HITS.47533967._000670.pool.root.1
[2025-11-21 15:25:31] -rw------- 1 boinc boinc      1035 Nov 21 15:24 memory_monitor_summary.json
[2025-11-21 15:25:31] -rw------- 1 boinc boinc   1526164 Nov 21 15:24 agis_ddmendpoints.agis.ALL.json
[2025-11-21 15:25:31] -rw------- 1 boinc boinc   1259311 Nov 21 15:24 log.47533967._000670.job.log.tgz.1
[2025-11-21 15:25:31] -rw------- 1 boinc boinc      8555 Nov 21 15:24 heartbeat.json
[2025-11-21 15:25:31] -rw------- 1 boinc boinc        95 Nov 21 15:25 pilot_heartbeat.json
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc      8192 Nov 21 15:25 boinc_mmap_file
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc        29 Nov 21 15:25 wrapper_checkpoint.txt
[2025-11-21 15:25:31] -rw------- 1 boinc boinc      5065 Nov 21 15:25 pilotlog.txt
[2025-11-21 15:25:31] -rw------- 1 boinc boinc   3670257 Nov 21 15:25 log.47533967._000670.job.log.1
[2025-11-21 15:25:31] -rw------- 1 boinc boinc       353 Nov 21 15:25 output.list
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc       620 Nov 21 15:25 runtime_log
[2025-11-21 15:25:31] -rw------- 1 boinc boinc   4945920 Nov 21 15:25 result.tar.gz
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc      8720 Nov 21 15:25 runtime_log.err
[2025-11-21 15:25:31] -rw------- 1 boinc boinc       651 Nov 21 15:25 5UTMDmDGVg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpoIKDmXFoKkm.diag
[2025-11-21 15:25:31] -rw-r--r-- 1 boinc boinc     21326 Nov 21 15:25 stderr.txt
[2025-11-21 15:25:31] HITS file was successfully produced:
[2025-11-21 15:25:31] -rw------- 1 boinc boinc 906222791 Nov 21 15:24 shared/HITS.pool.root.1
[2025-11-21 15:25:31]  *** Contents of shared directory: ***
[2025-11-21 15:25:31] total 1289024
[2025-11-21 15:25:31] -rw-r--r-- 2 boinc boinc 408172632 Nov 21 08:05 ATLAS.root_0
[2025-11-21 15:25:31] -rw-r--r-- 2 boinc boinc    590105 Nov 21 08:05 input.tar.gz
[2025-11-21 15:25:31] -rw-r--r-- 2 boinc boinc     15847 Nov 21 08:05 start_atlas.sh
[2025-11-21 15:25:31] -rw------- 1 boinc boinc 906222791 Nov 21 15:24 HITS.pool.root.1
[2025-11-21 15:25:31] -rw------- 1 boinc boinc   4945920 Nov 21 15:25 result.tar.gz
15:25:33 (811998): run_atlas exited; CPU time 104491.381140
15:25:33 (811998): called boinc_finish(0)

</stderr_txt>
]]>

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