Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:50:06 (491869): wrapper (7.7.26015): starting
09:50:06 (491869): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 09:50:06] Arguments: --nthreads 3
[2025-11-24 09:50:06] Threads: 3
[2025-11-24 09:50:06] Checking for CVMFS
[2025-11-24 09:50:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:50:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:50:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:50:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:50:06] 2.9.2.0 3581133 8249 89844 153239 0 81 27648874 36864001 0 130560 0 3054764 99.824 556582 6727 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 09:50:06] CVMFS is ok
[2025-11-24 09:50:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:50:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:50:06] Further information can be found at the LHC@home message board.
[2025-11-24 09:50:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:50:06] Checking for apptainer binary...
[2025-11-24 09:50:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:50:06] Running /usr/bin/apptainer --version
[2025-11-24 09:50:06] apptainer version 1.4.1-1.1
[2025-11-24 09:50:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:50:06] magicA250a
[2025-11-24 09:50:06] apptainer works
[2025-11-24 09:50:06] Set ATHENA_PROC_NUMBER=3
[2025-11-24 09:50:06] Set ATHENA_CORE_NUMBER=3
[2025-11-24 09:50:06] Starting ATLAS job with PandaID=6893935521
[2025-11-24 09:50:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 13:16:47]  *** The last 200 lines of the pilot log: ***
[2025-11-24 13:16:47] NAME="CentOS Linux"
[2025-11-24 13:16:47] VERSION="7 (Core)"
[2025-11-24 13:16:47] ID="centos"
[2025-11-24 13:16:47] ID_LIKE="rhel fedora"
[2025-11-24 13:16:47] VERSION_ID="7"
[2025-11-24 13:16:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 13:16:47] ANSI_COLOR="0;31"
[2025-11-24 13:16:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 13:16:47] HOME_URL="https://www.centos.org/"
[2025-11-24 13:16:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 13:16:47] 
[2025-11-24 13:16:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 13:16:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 13:16:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 13:16:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 13:16:47] 
[2025-11-24 13:16:47] 2025-11-24 12:16:15,586 | INFO     | ***************************************
[2025-11-24 13:16:47] 2025-11-24 12:16:16,089 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 13:16:47] 2025-11-24 12:16:16,099 | INFO     | sufficient remaining disk space (330767007744 B)
[2025-11-24 13:16:47] 2025-11-24 12:16:16,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 13:16:47] 2025-11-24 12:16:16,099 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 13:16:47] 2025-11-24 12:16:16,099 | INFO     | update_server=False
[2025-11-24 13:16:47] 2025-11-24 12:16:16,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 13:16:47] 2025-11-24 12:16:16,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 13:16:47] 2025-11-24 12:16:16,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:16:47] 2025-11-24 12:16:16,324 | INFO     | all job control threads have been joined
[2025-11-24 13:16:47] 2025-11-24 12:16:16,360 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 13:16:47] 2025-11-24 12:16:16,361 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 13:16:47] 2025-11-24 12:16:16,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:16:47] 2025-11-24 12:16:16,361 | INFO     | will abort loop
[2025-11-24 13:16:47] 2025-11-24 12:16:16,452 | INFO     | all data control threads have been joined
[2025-11-24 13:16:47] 2025-11-24 12:16:16,711 | INFO     | all payload control threads have been joined
[2025-11-24 13:16:47] 2025-11-24 12:16:17,105 | INFO     | [job] retrieve thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,105 | INFO     | [job] queue monitor thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,204 | INFO     | [payload] failed_post thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,329 | INFO     | [job] control thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,366 | INFO     | [job] job monitor thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,386 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,458 | INFO     | [data] control thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 13:16:47] 2025-11-24 12:16:17,617 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,640 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,716 | INFO     | [payload] control thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,838 | INFO     | [job] validate thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:17,954 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:18,119 | INFO     | [payload] validate_post thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:18,454 | INFO     | [data] copytool_in thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:19,505 | INFO     | [data] copytool_out thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:20,106 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 13:16:47] 2025-11-24 12:16:25,351 | INFO     | [monitor] cgroup control has ended
[2025-11-24 13:16:47] 2025-11-24 12:16:26,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536662591296)>', '<ExcThread(monitor, started 140536381933312)>']
[2025-11-24 13:16:47] 2025-11-24 12:16:32,011 | INFO     | all workflow threads have been joined
[2025-11-24 13:16:47] 2025-11-24 12:16:32,011 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 13:16:47] 2025-11-24 12:16:32,011 | INFO     | traces error code: 0
[2025-11-24 13:16:47] 2025-11-24 12:16:32,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 13:16:47] 2025-11-24 12:16:46,883 | INFO     | PID=495590 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 13:16:47] 2025-11-24 12:16:46,883 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 13:16:47] 2025-11-24 12:16:46,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 13:16:47] 2025-11-24 12:16:46,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 13:16:47] 2025-11-24 12:16:46,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 13:16:47] 2025-11-24 12:16:46,883 | INFO     | [monitor] control thread has ended
[2025-11-24 13:16:47] 2025-11-24 12:16:46,930 [wrapper] ==== pilot stdout END ====
[2025-11-24 13:16:47] 2025-11-24 12:16:46,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 13:16:47] 2025-11-24 12:16:46,934 [wrapper] pilotpid: 495590
[2025-11-24 13:16:47] 2025-11-24 12:16:46,937 [wrapper] Pilot exit status: 0
[2025-11-24 13:16:47] 2025-11-24 12:16:46,944 [wrapper] pandaids: 6893935521
[2025-11-24 13:16:47] 2025-11-24 12:16:46,960 [wrapper] cleanup supervisor_pilot  525170 495591
[2025-11-24 13:16:47] 2025-11-24 12:16:46,962 [wrapper] Test setup, not cleaning
[2025-11-24 13:16:47] 2025-11-24 12:16:46,965 [wrapper] apfmon messages muted
[2025-11-24 13:16:47] 2025-11-24 12:16:46,967 [wrapper] ==== wrapper stdout END ====
[2025-11-24 13:16:47] 2025-11-24 12:16:46,969 [wrapper] ==== wrapper stderr END ====
[2025-11-24 13:16:47]  *** Error codes and diagnostics ***
[2025-11-24 13:16:47]     "exeErrorCode": 0,
[2025-11-24 13:16:47]     "exeErrorDiag": "",
[2025-11-24 13:16:47]     "pilotErrorCode": 0,
[2025-11-24 13:16:47]     "pilotErrorDiag": "",
[2025-11-24 13:16:47]  *** Listing of results directory ***
[2025-11-24 13:16:47] total 628900
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc    576529 Nov 21 02:08 pilot3.tar.gz
[2025-11-24 13:16:47] -rwx------ 1 boinc boinc     36292 Nov 21 02:36 runpilot2-wrapper.sh
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc      5112 Nov 21 02:36 queuedata.json
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc       100 Nov 24 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 13:16:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 09:50 run_atlas
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc       105 Nov 24 09:50 job.xml
[2025-11-24 13:16:47] -rw-r--r-- 2 boinc boinc 301192292 Nov 24 09:50 EVNT.47523632._000002.pool.root.1
[2025-11-24 13:16:47] -rw-r--r-- 2 boinc boinc    589955 Nov 24 09:50 input.tar.gz
[2025-11-24 13:16:47] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:50 start_atlas.sh
[2025-11-24 13:16:47] drwxrwx--x 2 boinc boinc      4096 Nov 24 09:50 shared
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:50 boinc_setup_complete
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc      6442 Nov 24 09:50 init_data.xml
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:50 boinc_lockfile
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc      2628 Nov 24 09:50 pandaJob.out
[2025-11-24 13:16:47] -rw------- 1 boinc boinc    989794 Nov 24 09:50 agis_schedconf.cvmfs.json
[2025-11-24 13:16:47] drwx------ 5 boinc boinc      4096 Nov 24 09:50 pilot3
[2025-11-24 13:16:47] -rw------- 1 boinc boinc 334702797 Nov 24 13:15 HITS.47523634._000032.pool.root.1
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc       530 Nov 24 13:15 boinc_task_state.xml
[2025-11-24 13:16:47] -rw------- 1 boinc boinc      1025 Nov 24 13:16 memory_monitor_summary.json
[2025-11-24 13:16:47] -rw------- 1 boinc boinc   1516227 Nov 24 13:16 agis_ddmendpoints.agis.ALL.json
[2025-11-24 13:16:47] -rw------- 1 boinc boinc    353819 Nov 24 13:16 log.47523634._000032.job.log.tgz.1
[2025-11-24 13:16:47] -rw------- 1 boinc boinc        95 Nov 24 13:16 pilot_heartbeat.json
[2025-11-24 13:16:47] -rw------- 1 boinc boinc      7764 Nov 24 13:16 heartbeat.json
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc        28 Nov 24 13:16 wrapper_checkpoint.txt
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc      8192 Nov 24 13:16 boinc_mmap_file
[2025-11-24 13:16:47] -rw------- 1 boinc boinc       746 Nov 24 13:16 pilotlog.txt
[2025-11-24 13:16:47] -rw------- 1 boinc boinc   1746789 Nov 24 13:16 log.47523634._000032.job.log.1
[2025-11-24 13:16:47] -rw------- 1 boinc boinc       357 Nov 24 13:16 output.list
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc       620 Nov 24 13:16 runtime_log
[2025-11-24 13:16:47] -rw------- 1 boinc boinc   2119680 Nov 24 13:16 result.tar.gz
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc      8918 Nov 24 13:16 runtime_log.err
[2025-11-24 13:16:47] -rw------- 1 boinc boinc       665 Nov 24 13:16 3KYMDmDGVg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsoIKDmbR6jGo.diag
[2025-11-24 13:16:47] -rw-r--r-- 1 boinc boinc      8937 Nov 24 13:16 stderr.txt
[2025-11-24 13:16:47] HITS file was successfully produced:
[2025-11-24 13:16:47] -rw------- 1 boinc boinc 334702797 Nov 24 13:15 shared/HITS.pool.root.1
[2025-11-24 13:16:47]  *** Contents of shared directory: ***
[2025-11-24 13:16:47] total 623672
[2025-11-24 13:16:47] -rw-r--r-- 2 boinc boinc 301192292 Nov 24 09:50 ATLAS.root_0
[2025-11-24 13:16:47] -rw-r--r-- 2 boinc boinc    589955 Nov 24 09:50 input.tar.gz
[2025-11-24 13:16:47] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:50 start_atlas.sh
[2025-11-24 13:16:47] -rw------- 1 boinc boinc 334702797 Nov 24 13:15 HITS.pool.root.1
[2025-11-24 13:16:47] -rw------- 1 boinc boinc   2119680 Nov 24 13:16 result.tar.gz
13:16:48 (491869): run_atlas exited; CPU time 36197.294178
13:16:48 (491869): called boinc_finish(0)

</stderr_txt>
]]>

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