Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:02:32 (74324): wrapper (7.7.26015): starting
09:02:32 (74324): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 09:02:32] Arguments: --nthreads 8
[2025-11-21 09:02:32] Threads: 8
[2025-11-21 09:02:32] Checking for CVMFS
[2025-11-21 09:02:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 09:02:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 09:02:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 09:02:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 09:02:33] 2.13.2.0 10197 26623 198720 153129 1 98 35846096 40960001 5019 16776704 0 16035060 99.747 7911660 27093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 09:02:33] CVMFS is ok
[2025-11-21 09:02:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 09:02:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 09:02:33] Further information can be found at the LHC@home message board.
[2025-11-21 09:02:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 09:02:33] Checking for apptainer binary...
[2025-11-21 09:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 09:02:33] Running /usr/bin/apptainer --version
[2025-11-21 09:02:33] apptainer version 1.4.4-1.el9
[2025-11-21 09:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 09:02:33] c-211-12.aglt2.org
[2025-11-21 09:02:33] apptainer works
[2025-11-21 09:02:33] Set ATHENA_PROC_NUMBER=8
[2025-11-21 09:02:33] Set ATHENA_CORE_NUMBER=8
[2025-11-21 09:02:33] Starting ATLAS job with PandaID=6891585333
[2025-11-21 09:02:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 08:30:29]  *** The last 200 lines of the pilot log: ***
[2025-11-22 08:30:29] 2025-11-22 13:29:44,937 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 08:30:29] 2025-11-22 13:29:44,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 08:30:29] 2025-11-22 13:29:44,978 | INFO     | fitting pss+swap vs Time
[2025-11-22 08:30:29] 2025-11-22 13:29:44,983 | INFO     | sum of square deviations: 820448867388.1958
[2025-11-22 08:30:29] 2025-11-22 13:29:45,076 | INFO     | sum of deviations: 3621236761676.2383
[2025-11-22 08:30:29] 2025-11-22 13:29:45,076 | INFO     | mean x: 1763775953.845987
[2025-11-22 08:30:29] 2025-11-22 13:29:45,076 | INFO     | mean y: 2988475.367317426
[2025-11-22 08:30:29] 2025-11-22 13:29:45,076 | INFO     | intersect: -7781835877.867635
[2025-11-22 08:30:29] 2025-11-22 13:29:45,081 | INFO     | chi2: 7.492689534227495
[2025-11-22 08:30:29] 2025-11-22 13:29:45,083 | INFO     | sum of square deviations: 811586221081.469
[2025-11-22 08:30:29] 2025-11-22 13:29:45,168 | INFO     | sum of deviations: 4076889020698.244
[2025-11-22 08:30:29] 2025-11-22 13:29:45,168 | INFO     | mean x: 1763775801.359942
[2025-11-22 08:30:29] 2025-11-22 13:29:45,168 | INFO     | mean y: 2996315.584179971
[2025-11-22 08:30:29] 2025-11-22 13:29:45,169 | INFO     | intersect: -8857082888.268854
[2025-11-22 08:30:29] 2025-11-22 13:29:45,172 | INFO     | chi2: 4.676460601449301
[2025-11-22 08:30:29] 2025-11-22 13:29:45,173 | INFO     | current chi2=4.676460601449301 (change=37.58635560586524 %)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,175 | INFO     | sum of square deviations: 802787668999.1996
[2025-11-22 08:30:29] 2025-11-22 13:29:45,259 | INFO     | sum of deviations: 4386960225301.163
[2025-11-22 08:30:29] 2025-11-22 13:29:45,276 | INFO     | mean x: 1763775648.8739986
[2025-11-22 08:30:29] 2025-11-22 13:29:45,276 | INFO     | mean y: 3001685.3940276764
[2025-11-22 08:30:29] 2025-11-22 13:29:45,276 | INFO     | intersect: -9635429392.665665
[2025-11-22 08:30:29] 2025-11-22 13:29:45,278 | INFO     | chi2: 3.0512854441627386
[2025-11-22 08:30:29] 2025-11-22 13:29:45,278 | INFO     | current chi2=3.0512854441627386 (change=34.752247389465815 %)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,284 | INFO     | sum of square deviations: 794047116953.6492
[2025-11-22 08:30:29] 2025-11-22 13:29:45,384 | INFO     | sum of deviations: 4445099002081.123
[2025-11-22 08:30:29] 2025-11-22 13:29:45,387 | INFO     | mean x: 1763775496.3369882
[2025-11-22 08:30:29] 2025-11-22 13:29:45,387 | INFO     | mean y: 3002698.1081871344
[2025-11-22 08:30:29] 2025-11-22 13:29:45,387 | INFO     | intersect: -9870664155.24094
[2025-11-22 08:30:29] 2025-11-22 13:29:45,389 | INFO     | chi2: 2.895021016844156
[2025-11-22 08:30:29] 2025-11-22 13:29:45,389 | INFO     | current chi2=2.895021016844156 (change=5.121265452811834 %)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,390 | INFO     | right removable region: 1367
[2025-11-22 08:30:29] 2025-11-22 13:29:45,392 | INFO     | sum of square deviations: 811582976491.4677
[2025-11-22 08:30:29] 2025-11-22 13:29:45,463 | INFO     | sum of deviations: 3209682177020.161
[2025-11-22 08:30:29] 2025-11-22 13:29:45,463 | INFO     | mean x: 1763776106.359942
[2025-11-22 08:30:29] 2025-11-22 13:29:45,463 | INFO     | mean y: 2995549.1226415094
[2025-11-22 08:30:29] 2025-11-22 13:29:45,463 | INFO     | intersect: -6972459699.225633
[2025-11-22 08:30:29] 2025-11-22 13:29:45,465 | INFO     | chi2: 5.098875947870827
[2025-11-22 08:30:29] 2025-11-22 13:29:45,465 | INFO     | current chi2=5.098875947870827 (change=31.948655758675752 %)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,467 | INFO     | sum of square deviations: 802781515834.1826
[2025-11-22 08:30:29] 2025-11-22 13:29:45,517 | INFO     | sum of deviations: 3095731518123.4565
[2025-11-22 08:30:29] 2025-11-22 13:29:45,518 | INFO     | mean x: 1763776258.8710852
[2025-11-22 08:30:29] 2025-11-22 13:29:45,518 | INFO     | mean y: 2997523.200291333
[2025-11-22 08:30:29] 2025-11-22 13:29:45,518 | INFO     | intersect: -6798576314.522343
[2025-11-22 08:30:29] 2025-11-22 13:29:45,520 | INFO     | chi2: 5.016617226265161
[2025-11-22 08:30:29] 2025-11-22 13:29:45,520 | INFO     | current chi2=5.016617226265161 (change=1.613271678829816 %)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,520 | INFO     | left removable region: 20
[2025-11-22 08:30:29] 2025-11-22 13:29:45,522 | INFO     | sum of square deviations: 758041145042.2313
[2025-11-22 08:30:29] 2025-11-22 13:29:45,567 | INFO     | sum of deviations: 3742734393541.6895
[2025-11-22 08:30:29] 2025-11-22 13:29:45,568 | INFO     | mean x: 1763776075.88196
[2025-11-22 08:30:29] 2025-11-22 13:29:45,568 | INFO     | mean y: 3014903.6332590943
[2025-11-22 08:30:29] 2025-11-22 13:29:45,568 | INFO     | intersect: -8705411314.23601
[2025-11-22 08:30:29] 2025-11-22 13:29:45,570 | INFO     | chi2: 0.3490251346066598
[2025-11-22 08:30:29] 2025-11-22 13:29:45,570 | INFO     | current memory leak: 4.94 B/s (using 1347 data points, chi2=0.35)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,571 | INFO     | could have reported an average CPU frequency of 2656 MHz (49 samples)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,571 | INFO     | ..............................
[2025-11-22 08:30:29] 2025-11-22 13:29:45,572 | INFO     | . Timing measurements:
[2025-11-22 08:30:29] 2025-11-22 13:29:45,572 | INFO     | . get job = 0 s
[2025-11-22 08:30:29] 2025-11-22 13:29:45,572 | INFO     | . initial setup = 2 s
[2025-11-22 08:30:29] 2025-11-22 13:29:45,572 | INFO     | . payload setup = 7 s
[2025-11-22 08:30:29] 2025-11-22 13:29:45,572 | INFO     | . stage-in = 0 s
[2025-11-22 08:30:29] 2025-11-22 13:29:45,572 | INFO     | . payload execution = 84364 s
[2025-11-22 08:30:29] 2025-11-22 13:29:45,572 | INFO     | . stage-out = 9 s
[2025-11-22 08:30:29] 2025-11-22 13:29:45,572 | INFO     | . log creation = 1 s
[2025-11-22 08:30:29] 2025-11-22 13:29:45,572 | INFO     | ..............................
[2025-11-22 08:30:29] 2025-11-22 13:29:45,678 | INFO     | 
[2025-11-22 08:30:29] 2025-11-22 13:29:45,679 | INFO     | job summary report
[2025-11-22 08:30:29] 2025-11-22 13:29:45,679 | INFO     | --------------------------------------------------
[2025-11-22 08:30:29] 2025-11-22 13:29:45,679 | INFO     | PanDA job id: 6891585333
[2025-11-22 08:30:29] 2025-11-22 13:29:45,679 | INFO     | task id: 47493068
[2025-11-22 08:30:29] 2025-11-22 13:29:45,689 | INFO     | errors: (none)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 08:30:29] 2025-11-22 13:29:45,690 | INFO     | pilot state: finished 
[2025-11-22 08:30:29] 2025-11-22 13:29:45,690 | INFO     | transexitcode: 0
[2025-11-22 08:30:29] 2025-11-22 13:29:45,690 | INFO     | exeerrorcode: 0
[2025-11-22 08:30:29] 2025-11-22 13:29:45,690 | INFO     | exeerrordiag: 
[2025-11-22 08:30:29] 2025-11-22 13:29:45,690 | INFO     | exitcode: 0
[2025-11-22 08:30:29] 2025-11-22 13:29:45,690 | INFO     | exitmsg: OK
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | cpuconsumptiontime: 324123 s
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | nevents: 1000
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | neventsw: 0
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | pid: 84421
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | pgrp: 84421
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | corecount: 8
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | event service: False
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | sizes: {0: 2298625, 1: 2298824, 6: 2299086, 11: 2299114, 84375: 2363440, 84376: 2363439, 84386: 2372617, 84388: 2372673, 84400: 2372919}
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | --------------------------------------------------
[2025-11-22 08:30:29] 2025-11-22 13:29:45,691 | INFO     | 
[2025-11-22 08:30:29] 2025-11-22 13:29:45,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-22 08:30:29] 2025-11-22 13:29:45,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,731 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,731 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,731 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,732 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,732 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,732 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 08:30:29] 2025-11-22 13:29:45,733 | INFO     | job 6891585333 has completed (purged errors)
[2025-11-22 08:30:29] 2025-11-22 13:29:45,733 | INFO     | overall cleanup function is called
[2025-11-22 08:30:29] 2025-11-22 13:29:46,760 | INFO     | --- collectZombieJob: --- 10, [84421]
[2025-11-22 08:30:29] 2025-11-22 13:29:46,761 | INFO     | zombie collector waiting for pid 84421
[2025-11-22 08:30:29] 2025-11-22 13:29:46,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 08:30:29] 2025-11-22 13:29:46,761 | INFO     | collected zombie processes
[2025-11-22 08:30:29] 2025-11-22 13:29:46,761 | INFO     | will attempt to kill all subprocesses of pid=84421
[2025-11-22 08:30:29] 2025-11-22 13:29:47,218 | INFO     | process IDs to be killed: [84421] (in reverse order)
[2025-11-22 08:30:29] 2025-11-22 13:29:47,342 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 08:30:29] 2025-11-22 13:29:47,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 08:30:29] 2025-11-22 13:29:47,354 | INFO     | did not find any defunct processes belonging to 84421
[2025-11-22 08:30:29] 2025-11-22 13:29:47,364 | INFO     | did not find any defunct processes belonging to 84421
[2025-11-22 08:30:29] 2025-11-22 13:29:47,365 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 08:30:29] 2025-11-22 13:29:47,365 | INFO     | ready for new job
[2025-11-22 08:30:29] 2025-11-22 13:29:47,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 08:30:29] 2025-11-22 13:29:47,384 | INFO     | ***************************************
[2025-11-22 08:30:29] 2025-11-22 13:29:47,386 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 08:30:29] 2025-11-22 13:29:47,386 | INFO     | ***************************************
[2025-11-22 08:30:29] 2025-11-22 13:29:47,386 | INFO     | 
[2025-11-22 08:30:29] 2025-11-22 13:29:47,391 | INFO     | architecture information:
[2025-11-22 08:30:29] 2025-11-22 13:29:47,394 | INFO     | executing command: cat /etc/os-release
[2025-11-22 08:30:29] 2025-11-22 13:29:47,428 | INFO     | cat /etc/os-release:
[2025-11-22 08:30:29] NAME="CentOS Linux"
[2025-11-22 08:30:29] VERSION="7 (Core)"
[2025-11-22 08:30:29] ID="centos"
[2025-11-22 08:30:29] ID_LIKE="rhel fedora"
[2025-11-22 08:30:29] VERSION_ID="7"
[2025-11-22 08:30:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 08:30:29] ANSI_COLOR="0;31"
[2025-11-22 08:30:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 08:30:29] HOME_URL="https://www.centos.org/"
[2025-11-22 08:30:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 08:30:29] 
[2025-11-22 08:30:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 08:30:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 08:30:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 08:30:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 08:30:29] 
[2025-11-22 08:30:29] 2025-11-22 13:29:47,429 | INFO     | ***************************************
[2025-11-22 08:30:29] 2025-11-22 13:29:47,933 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-22 08:30:29] 2025-11-22 13:29:47,972 | INFO     | sufficient remaining disk space (58916339712 B)
[2025-11-22 08:30:29] 2025-11-22 13:29:47,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 08:30:29] 2025-11-22 13:29:47,975 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 08:30:29] 2025-11-22 13:29:47,975 | INFO     | update_server=False
[2025-11-22 08:30:29] 2025-11-22 13:29:47,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 08:30:29] 2025-11-22 13:29:47,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 08:30:29] 2025-11-22 13:29:47,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:30:29] 2025-11-22 13:29:47,976 | INFO     | aborting loop
[2025-11-22 08:30:29] 2025-11-22 13:29:48,005 | INFO     | all data control threads have been joined
[2025-11-22 08:30:29] 2025-11-22 13:29:48,293 | INFO     | all job control threads have been joined
[2025-11-22 08:30:29] 2025-11-22 13:29:48,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 08:30:29] 2025-11-22 13:29:48,984 | INFO     | [job] retrieve thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:48,998 | INFO     | [job] job monitor thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:49,014 | INFO     | [data] control thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:49,116 | INFO     | all payload control threads have been joined
[2025-11-22 08:30:29] 2025-11-22 13:29:49,300 | INFO     | [job] control thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:49,989 | INFO     | [data] copytool_out thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,011 | INFO     | [payload] failed_post thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,022 | INFO     | [payload] validate_post thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,124 | INFO     | [payload] control thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,319 | INFO     | [job] validate thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,358 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,389 | INFO     | [data] copytool_in thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,392 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,402 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,417 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:50,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:30:29] 2025-11-22 13:29:51,700 | INFO     | [job] queue monitor thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:29:52,418 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 08:30:29] 2025-11-22 13:30:18,294 | INFO     | PID=78051 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 08:30:29] 2025-11-22 13:30:18,294 | INFO     | .. there are 10 such processes running
[2025-11-22 08:30:29] 2025-11-22 13:30:18,295 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 08:30:29] 2025-11-22 13:30:18,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 08:30:29] 2025-11-22 13:30:18,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 08:30:29] 2025-11-22 13:30:23,016 | INFO     | [monitor] cgroup control has ended
[2025-11-22 08:30:29] 2025-11-22 13:30:24,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216369047360)>', '<ExcThread(monitor, started 140215867905792)>']
[2025-11-22 08:30:29] 2025-11-22 13:30:25,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 08:30:29] 2025-11-22 13:30:25,335 | INFO     | [monitor] control thread has ended
[2025-11-22 08:30:29] 2025-11-22 13:30:29,435 | INFO     | all workflow threads have been joined
[2025-11-22 08:30:29] 2025-11-22 13:30:29,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 08:30:29] 2025-11-22 13:30:29,454 | INFO     | traces error code: 0
[2025-11-22 08:30:29] 2025-11-22 13:30:29,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 08:30:29] 2025-11-22 13:30:29,721 [wrapper] ==== pilot stdout END ====
[2025-11-22 08:30:29] 2025-11-22 13:30:29,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 08:30:29] 2025-11-22 13:30:29,738 [wrapper] pilotpid: 78051
[2025-11-22 08:30:29] 2025-11-22 13:30:29,742 [wrapper] Pilot exit status: 0
[2025-11-22 08:30:29] 2025-11-22 13:30:29,761 [wrapper] pandaids: 6891585333
[2025-11-22 08:30:29] 2025-11-22 13:30:29,822 [wrapper] cleanup supervisor_pilot 2119891 78052
[2025-11-22 08:30:29] 2025-11-22 13:30:29,825 [wrapper] Test setup, not cleaning
[2025-11-22 08:30:29] 2025-11-22 13:30:29,829 [wrapper] apfmon messages muted
[2025-11-22 08:30:29] 2025-11-22 13:30:29,832 [wrapper] ==== wrapper stdout END ====
[2025-11-22 08:30:29] 2025-11-22 13:30:29,836 [wrapper] ==== wrapper stderr END ====
[2025-11-22 08:30:29]  *** Error codes and diagnostics ***
[2025-11-22 08:30:29]     "exeErrorCode": 0,
[2025-11-22 08:30:29]     "exeErrorDiag": "",
[2025-11-22 08:30:29]     "pilotErrorCode": 0,
[2025-11-22 08:30:29]     "pilotErrorDiag": "",
[2025-11-22 08:30:29]  *** Listing of results directory ***
[2025-11-22 08:30:29] total 1321692
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 12:24 pilot3.tar.gz
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:25 queuedata.json
[2025-11-22 08:30:29] -rwx------. 1 boincer umatlas     36292 Nov 18 12:26 runpilot2-wrapper.sh
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas       100 Nov 21 09:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 08:30:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 09:02 run_atlas
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas       105 Nov 21 09:02 job.xml
[2025-11-22 08:30:29] -rw-r--r--. 2 boincer umatlas 409649453 Nov 21 09:02 EVNT.47493065._000480.pool.root.1
[2025-11-22 08:30:29] -rw-r--r--. 2 boincer umatlas     15120 Nov 21 09:02 start_atlas.sh
[2025-11-22 08:30:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 09:02 shared
[2025-11-22 08:30:29] -rw-r--r--. 2 boincer umatlas    590096 Nov 21 09:02 input.tar.gz
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas         0 Nov 21 09:02 boinc_lockfile
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas      2773 Nov 21 09:02 pandaJob.out
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas    989817 Nov 21 09:02 agis_schedconf.cvmfs.json
[2025-11-22 08:30:29] drwx------. 5 boincer umatlas      4096 Nov 21 09:02 pilot3
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas       533 Nov 22 08:14 boinc_task_state.xml
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas      6616 Nov 22 08:19 init_data.xml
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas 913545869 Nov 22 08:28 HITS.47493068._004796.pool.root.1
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas      1058 Nov 22 08:29 memory_monitor_summary.json
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas   1526164 Nov 22 08:29 agis_ddmendpoints.agis.ALL.json
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas   2414552 Nov 22 08:29 log.47493068._004796.job.log.tgz.1
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas      8628 Nov 22 08:29 heartbeat.json
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas        95 Nov 22 08:30 pilot_heartbeat.json
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas        29 Nov 22 08:30 wrapper_checkpoint.txt
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 08:30 boinc_mmap_file
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas      4822 Nov 22 08:30 pilotlog.txt
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas  10732983 Nov 22 08:30 log.47493068._004796.job.log.1
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas       353 Nov 22 08:30 output.list
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas       620 Nov 22 08:30 runtime_log
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas  13168640 Nov 22 08:30 result.tar.gz
[2025-11-22 08:30:29] -rw-------. 1 boincer umatlas       660 Nov 22 08:30 Z0HLDm3def8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmr2FKDmcj3Ham.diag
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas      8704 Nov 22 08:30 runtime_log.err
[2025-11-22 08:30:29] -rw-r--r--. 1 boincer umatlas     21107 Nov 22 08:30 stderr.txt
[2025-11-22 08:30:30] HITS file was successfully produced:
[2025-11-22 08:30:30] -rw-------. 1 boincer umatlas 913545869 Nov 22 08:28 shared/HITS.pool.root.1
[2025-11-22 08:30:30]  *** Contents of shared directory: ***
[2025-11-22 08:30:30] total 1305648
[2025-11-22 08:30:30] -rw-r--r--. 2 boincer umatlas 409649453 Nov 21 09:02 ATLAS.root_0
[2025-11-22 08:30:30] -rw-r--r--. 2 boincer umatlas     15120 Nov 21 09:02 start_atlas.sh
[2025-11-22 08:30:30] -rw-r--r--. 2 boincer umatlas    590096 Nov 21 09:02 input.tar.gz
[2025-11-22 08:30:30] -rw-------. 1 boincer umatlas 913545869 Nov 22 08:28 HITS.pool.root.1
[2025-11-22 08:30:30] -rw-------. 1 boincer umatlas  13168640 Nov 22 08:30 result.tar.gz
08:30:31 (74324): run_atlas exited; CPU time 325967.819975
08:30:31 (74324): called boinc_finish(0)

</stderr_txt>
]]>

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