Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:08:41 (8956): wrapper (7.7.26015): starting
09:08:41 (8956): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 09:08:41] Arguments: --nthreads 8
[2025-11-21 09:08:41] Threads: 8
[2025-11-21 09:08:41] Checking for CVMFS
[2025-11-21 09:08:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 09:08:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 09:08:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 09:08:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 09:08:41] 2.11.2.0 2802 66200 82072 153129 1 82 19400188 20275201 1 130560 0 18580631 99.912 3254743 20552 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 09:08:41] CVMFS is ok
[2025-11-21 09:08:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 09:08:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 09:08:41] Further information can be found at the LHC@home message board.
[2025-11-21 09:08:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 09:08:41] Checking for apptainer binary...
[2025-11-21 09:08:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 09:08:41] Running /usr/bin/apptainer --version
[2025-11-21 09:08:41] apptainer version 1.3.2-1.el7
[2025-11-21 09:08:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 09:08:43] c-204-8.aglt2.org
[2025-11-21 09:08:43] apptainer works
[2025-11-21 09:08:43] Set ATHENA_PROC_NUMBER=8
[2025-11-21 09:08:43] Set ATHENA_CORE_NUMBER=8
[2025-11-21 09:08:43] Starting ATLAS job with PandaID=6894245865
[2025-11-21 09:08:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:49:21]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:49:21] 2025-11-22 02:48:16,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:49:21] 2025-11-22 02:48:18,668 | INFO     | time since job start (45557s) is within the limit (172800.0s)
[2025-11-21 21:49:21] 2025-11-22 02:48:19,266 | INFO     | monitor loop #3354: job 0:6894245865 is in state 'finished'
[2025-11-21 21:49:21] 2025-11-22 02:48:19,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:49:21] 2025-11-22 02:48:19,969 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 21:49:21] 2025-11-22 02:48:19,972 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-21 21:49:21] 2025-11-22 02:48:19,974 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894245865/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 21:49:21] 2025-11-22 02:48:19,975 | INFO     | extracted standard info from prmon json
[2025-11-21 21:49:21] 2025-11-22 02:48:19,975 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:49:21] 2025-11-22 02:48:19,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:49:21] 2025-11-22 02:48:19,989 | INFO     | fitting pss+swap vs Time
[2025-11-21 21:49:21] 2025-11-22 02:48:19,990 | INFO     | sum of square deviations: 129253389772.2917
[2025-11-21 21:49:21] 2025-11-22 02:48:20,001 | INFO     | sum of deviations: 744304969203.1997
[2025-11-21 21:49:21] 2025-11-22 02:48:20,001 | INFO     | mean x: 1763756926.4752343
[2025-11-21 21:49:21] 2025-11-22 02:48:20,002 | INFO     | mean y: 2855374.145917001
[2025-11-21 21:49:21] 2025-11-22 02:48:20,002 | INFO     | intersect: -10153729665.169632
[2025-11-21 21:49:21] 2025-11-22 02:48:20,003 | INFO     | chi2: 7.530100567736456
[2025-11-21 21:49:21] 2025-11-22 02:48:20,003 | INFO     | sum of square deviations: 126675393893.65518
[2025-11-21 21:49:21] 2025-11-22 02:48:20,015 | INFO     | sum of deviations: 1012380300382.8279
[2025-11-21 21:49:21] 2025-11-22 02:48:20,015 | INFO     | mean x: 1763756773.9784367
[2025-11-21 21:49:21] 2025-11-22 02:48:20,015 | INFO     | mean y: 2871233.4892183286
[2025-11-21 21:49:21] 2025-11-22 02:48:20,015 | INFO     | intersect: -14092941360.877403
[2025-11-21 21:49:21] 2025-11-22 02:48:20,016 | INFO     | chi2: 3.889703428172062
[2025-11-21 21:49:21] 2025-11-22 02:48:20,016 | INFO     | current chi2=3.889703428172062 (change=48.344601865771565 %)
[2025-11-21 21:49:21] 2025-11-22 02:48:20,017 | INFO     | sum of square deviations: 124131910290.00285
[2025-11-21 21:49:21] 2025-11-22 02:48:20,028 | INFO     | sum of deviations: 1139015409222.7593
[2025-11-21 21:49:21] 2025-11-22 02:48:20,028 | INFO     | mean x: 1763756621.4816825
[2025-11-21 21:49:21] 2025-11-22 02:48:20,028 | INFO     | mean y: 2878826.130257802
[2025-11-21 21:49:21] 2025-11-22 02:48:20,028 | INFO     | intersect: -16181081972.450182
[2025-11-21 21:49:21] 2025-11-22 02:48:20,029 | INFO     | chi2: 2.963988037295555
[2025-11-21 21:49:21] 2025-11-22 02:48:20,029 | INFO     | current chi2=2.963988037295555 (change=23.799125253915314 %)
[2025-11-21 21:49:21] 2025-11-22 02:48:20,029 | INFO     | right removable region: 736
[2025-11-21 21:49:21] 2025-11-22 02:48:20,030 | INFO     | sum of square deviations: 126675177343.65524
[2025-11-21 21:49:21] 2025-11-22 02:48:20,041 | INFO     | sum of deviations: 542997442844.07025
[2025-11-21 21:49:21] 2025-11-22 02:48:20,042 | INFO     | mean x: 1763757078.9784367
[2025-11-21 21:49:21] 2025-11-22 02:48:20,042 | INFO     | mean y: 2867260.629380054
[2025-11-21 21:49:21] 2025-11-22 02:48:20,042 | INFO     | intersect: -7557537261.917648
[2025-11-21 21:49:21] 2025-11-22 02:48:20,043 | INFO     | chi2: 5.277805985601584
[2025-11-21 21:49:21] 2025-11-22 02:48:20,043 | INFO     | current chi2=5.277805985601584 (change=29.91055115233222 %)
[2025-11-21 21:49:21] 2025-11-22 02:48:20,044 | INFO     | sum of square deviations: 124131522207.96355
[2025-11-21 21:49:21] 2025-11-22 02:48:20,055 | INFO     | sum of deviations: 485762505207.4494
[2025-11-21 21:49:21] 2025-11-22 02:48:20,055 | INFO     | mean x: 1763757231.4803257
[2025-11-21 21:49:21] 2025-11-22 02:48:20,055 | INFO     | mean y: 2870690.789687924
[2025-11-21 21:49:21] 2025-11-22 02:48:20,055 | INFO     | intersect: -6899220865.827614
[2025-11-21 21:49:21] 2025-11-22 02:48:20,056 | INFO     | chi2: 5.182642729450574
[2025-11-21 21:49:21] 2025-11-22 02:48:20,056 | INFO     | current chi2=5.182642729450574 (change=1.8030836376067165 %)
[2025-11-21 21:49:21] 2025-11-22 02:48:20,056 | INFO     | left removable region: 20
[2025-11-21 21:49:21] 2025-11-22 02:48:20,057 | INFO     | sum of square deviations: 113820260017.90947
[2025-11-21 21:49:21] 2025-11-22 02:48:20,067 | INFO     | sum of deviations: 820642950602.5977
[2025-11-21 21:49:21] 2025-11-22 02:48:20,067 | INFO     | mean x: 1763757200.9888268
[2025-11-21 21:49:21] 2025-11-22 02:48:20,068 | INFO     | mean y: 2901505.4497206705
[2025-11-21 21:49:21] 2025-11-22 02:48:20,068 | INFO     | intersect: -12713770494.230309
[2025-11-21 21:49:21] 2025-11-22 02:48:20,068 | INFO     | chi2: 0.3407538777046505
[2025-11-21 21:49:21] 2025-11-22 02:48:20,069 | INFO     | current memory leak: 7.21 B/s (using 716 data points, chi2=0.34)
[2025-11-21 21:49:21] 2025-11-22 02:48:20,069 | INFO     | could have reported an average CPU frequency of 2176 MHz (28 samples)
[2025-11-21 21:49:21] 2025-11-22 02:48:20,069 | INFO     | ..............................
[2025-11-21 21:49:21] 2025-11-22 02:48:20,069 | INFO     | . Timing measurements:
[2025-11-21 21:49:21] 2025-11-22 02:48:20,070 | INFO     | . get job = 0 s
[2025-11-21 21:49:21] 2025-11-22 02:48:20,070 | INFO     | . initial setup = 2 s
[2025-11-21 21:49:21] 2025-11-22 02:48:20,070 | INFO     | . payload setup = 8 s
[2025-11-21 21:49:21] 2025-11-22 02:48:20,070 | INFO     | . stage-in = 0 s
[2025-11-21 21:49:21] 2025-11-22 02:48:20,070 | INFO     | . payload execution = 45515 s
[2025-11-21 21:49:21] 2025-11-22 02:48:20,070 | INFO     | . stage-out = 3 s
[2025-11-21 21:49:21] 2025-11-22 02:48:20,070 | INFO     | . log creation = 0 s
[2025-11-21 21:49:21] 2025-11-22 02:48:20,070 | INFO     | ..............................
[2025-11-21 21:49:21] 2025-11-22 02:48:20,274 | INFO     | 
[2025-11-21 21:49:21] 2025-11-22 02:48:20,275 | INFO     | job summary report
[2025-11-21 21:49:21] 2025-11-22 02:48:20,275 | INFO     | --------------------------------------------------
[2025-11-21 21:49:21] 2025-11-22 02:48:20,275 | INFO     | PanDA job id: 6894245865
[2025-11-21 21:49:21] 2025-11-22 02:48:20,275 | INFO     | task id: 47533967
[2025-11-21 21:49:21] 2025-11-22 02:48:20,275 | INFO     | errors: (none)
[2025-11-21 21:49:21] 2025-11-22 02:48:20,275 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:49:21] 2025-11-22 02:48:20,276 | INFO     | pilot state: finished 
[2025-11-21 21:49:21] 2025-11-22 02:48:20,276 | INFO     | transexitcode: 0
[2025-11-21 21:49:21] 2025-11-22 02:48:20,276 | INFO     | exeerrorcode: 0
[2025-11-21 21:49:21] 2025-11-22 02:48:20,276 | INFO     | exeerrordiag: 
[2025-11-21 21:49:21] 2025-11-22 02:48:20,276 | INFO     | exitcode: 0
[2025-11-21 21:49:21] 2025-11-22 02:48:20,276 | INFO     | exitmsg: OK
[2025-11-21 21:49:21] 2025-11-22 02:48:20,277 | INFO     | cpuconsumptiontime: 350587 s
[2025-11-21 21:49:21] 2025-11-22 02:48:20,277 | INFO     | nevents: 1000
[2025-11-21 21:49:21] 2025-11-22 02:48:20,277 | INFO     | neventsw: 0
[2025-11-21 21:49:21] 2025-11-22 02:48:20,277 | INFO     | pid: 19135
[2025-11-21 21:49:21] 2025-11-22 02:48:20,277 | INFO     | pgrp: 19135
[2025-11-21 21:49:21] 2025-11-22 02:48:20,277 | INFO     | corecount: 8
[2025-11-21 21:49:21] 2025-11-22 02:48:20,278 | INFO     | event service: False
[2025-11-21 21:49:21] 2025-11-22 02:48:20,278 | INFO     | sizes: {0: 2298634, 1: 2298833, 7: 2299095, 11: 2299123, 45528: 2345271, 45532: 2354265, 45535: 2354449, 45542: 2354695}
[2025-11-21 21:49:21] 2025-11-22 02:48:20,278 | INFO     | --------------------------------------------------
[2025-11-21 21:49:21] 2025-11-22 02:48:20,278 | INFO     | 
[2025-11-21 21:49:21] 2025-11-22 02:48:20,278 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 21:49:21] 2025-11-22 02:48:20,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,309 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,312 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:49:21] 2025-11-22 02:48:20,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:49:21] 2025-11-22 02:48:20,312 | INFO     | job 6894245865 has completed (purged errors)
[2025-11-21 21:49:21] 2025-11-22 02:48:20,313 | INFO     | overall cleanup function is called
[2025-11-21 21:49:21] 2025-11-22 02:48:21,328 | INFO     | --- collectZombieJob: --- 10, [19135]
[2025-11-21 21:49:21] 2025-11-22 02:48:21,328 | INFO     | zombie collector waiting for pid 19135
[2025-11-21 21:49:21] 2025-11-22 02:48:21,329 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:49:21] 2025-11-22 02:48:21,329 | INFO     | collected zombie processes
[2025-11-21 21:49:21] 2025-11-22 02:48:21,329 | INFO     | will attempt to kill all subprocesses of pid=19135
[2025-11-21 21:49:21] 2025-11-22 02:48:21,418 | INFO     | process IDs to be killed: [19135] (in reverse order)
[2025-11-21 21:49:21] 2025-11-22 02:48:21,473 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:49:21] 2025-11-22 02:48:21,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:49:21] 2025-11-22 02:48:21,478 | INFO     | did not find any defunct processes belonging to 19135
[2025-11-21 21:49:21] 2025-11-22 02:48:21,482 | INFO     | did not find any defunct processes belonging to 19135
[2025-11-21 21:49:21] 2025-11-22 02:48:21,485 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:49:21] 2025-11-22 02:48:21,485 | INFO     | ready for new job
[2025-11-21 21:49:21] 2025-11-22 02:48:21,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:49:21] 2025-11-22 02:48:21,489 | INFO     | ***************************************
[2025-11-21 21:49:21] 2025-11-22 02:48:21,489 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:49:21] 2025-11-22 02:48:21,489 | INFO     | ***************************************
[2025-11-21 21:49:21] 2025-11-22 02:48:21,489 | INFO     | 
[2025-11-21 21:49:21] 2025-11-22 02:48:21,489 | INFO     | architecture information:
[2025-11-21 21:49:21] 2025-11-22 02:48:21,490 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:49:21] 2025-11-22 02:48:21,510 | INFO     | cat /etc/os-release:
[2025-11-21 21:49:21] NAME="CentOS Linux"
[2025-11-21 21:49:21] VERSION="7 (Core)"
[2025-11-21 21:49:21] ID="centos"
[2025-11-21 21:49:21] ID_LIKE="rhel fedora"
[2025-11-21 21:49:21] VERSION_ID="7"
[2025-11-21 21:49:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:49:21] ANSI_COLOR="0;31"
[2025-11-21 21:49:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:49:21] HOME_URL="https://www.centos.org/"
[2025-11-21 21:49:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:49:21] 
[2025-11-21 21:49:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:49:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:49:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:49:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:49:21] 
[2025-11-21 21:49:21] 2025-11-22 02:48:21,510 | INFO     | ***************************************
[2025-11-21 21:49:21] 2025-11-22 02:48:22,014 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 21:49:21] 2025-11-22 02:48:22,034 | INFO     | sufficient remaining disk space (17490247680 B)
[2025-11-21 21:49:21] 2025-11-22 02:48:22,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:49:21] 2025-11-22 02:48:22,035 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:49:21] 2025-11-22 02:48:22,035 | INFO     | update_server=False
[2025-11-21 21:49:21] 2025-11-22 02:48:22,035 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:49:21] 2025-11-22 02:48:22,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:49:21] 2025-11-22 02:48:22,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:49:21] 2025-11-22 02:48:22,775 | INFO     | aborting loop
[2025-11-21 21:49:21] 2025-11-22 02:48:22,821 | INFO     | all data control threads have been joined
[2025-11-21 21:49:21] 2025-11-22 02:48:22,833 | INFO     | all payload control threads have been joined
[2025-11-21 21:49:21] 2025-11-22 02:48:23,041 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:49:21] 2025-11-22 02:48:23,041 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,058 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,066 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:49:21] 2025-11-22 02:48:23,322 | INFO     | [job] validate thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,364 | INFO     | all job control threads have been joined
[2025-11-21 21:49:21] 2025-11-22 02:48:23,406 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,445 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,643 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,781 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,827 | INFO     | [data] control thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:23,838 | INFO     | [payload] control thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:24,080 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:24,198 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:24,369 | INFO     | [job] control thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:25,310 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:27,048 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:49:21] 2025-11-22 02:48:51,876 | INFO     | PID=12632 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 21:49:21] 2025-11-22 02:48:51,876 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:49:21] 2025-11-22 02:48:51,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:49:21] 2025-11-22 02:48:51,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:49:21] 2025-11-22 02:49:16,266 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:49:21] 2025-11-22 02:49:16,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716389943104)>', '<ExcThread(monitor, started 140716162938624)>']
[2025-11-21 21:49:21] 2025-11-22 02:49:16,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:49:21] 2025-11-22 02:49:16,950 | INFO     | [monitor] control thread has ended
[2025-11-21 21:49:21] 2025-11-22 02:49:21,406 | INFO     | all workflow threads have been joined
[2025-11-21 21:49:21] 2025-11-22 02:49:21,407 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:49:21] 2025-11-22 02:49:21,407 | INFO     | traces error code: 0
[2025-11-21 21:49:21] 2025-11-22 02:49:21,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:49:21] 2025-11-22 02:49:21,511 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:49:21] 2025-11-22 02:49:21,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:49:21] 2025-11-22 02:49:21,521 [wrapper] pilotpid: 12632
[2025-11-21 21:49:21] 2025-11-22 02:49:21,526 [wrapper] Pilot exit status: 0
[2025-11-21 21:49:21] 2025-11-22 02:49:21,544 [wrapper] pandaids: 6894245865
[2025-11-21 21:49:21] 2025-11-22 02:49:21,598 [wrapper] cleanup supervisor_pilot 14041 12633
[2025-11-21 21:49:21] 2025-11-22 02:49:21,603 [wrapper] Test setup, not cleaning
[2025-11-21 21:49:21] 2025-11-22 02:49:21,608 [wrapper] apfmon messages muted
[2025-11-21 21:49:21] 2025-11-22 02:49:21,612 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:49:21] 2025-11-22 02:49:21,617 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:49:21]  *** Error codes and diagnostics ***
[2025-11-21 21:49:21]     "exeErrorCode": 0,
[2025-11-21 21:49:21]     "exeErrorDiag": "",
[2025-11-21 21:49:21]     "pilotErrorCode": 0,
[2025-11-21 21:49:21]     "pilotErrorDiag": "",
[2025-11-21 21:49:21]  *** Listing of results directory ***
[2025-11-21 21:49:21] total 1302084
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 20:08 pilot3.tar.gz
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 20:17 queuedata.json
[2025-11-21 21:49:21] -rwx------ 1 boincer umatlas     36292 Nov 20 20:18 runpilot2-wrapper.sh
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas       100 Nov 21 09:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:49:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 09:08 run_atlas
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas       105 Nov 21 09:08 job.xml
[2025-11-21 21:49:21] -rw-r--r-- 2 boincer umatlas 408066602 Nov 21 09:08 EVNT.47493127._002084.pool.root.1
[2025-11-21 21:49:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 09:08 start_atlas.sh
[2025-11-21 21:49:21] drwxrwx--x 2 boincer umatlas      4096 Nov 21 09:08 shared
[2025-11-21 21:49:21] -rw-r--r-- 2 boincer umatlas    590107 Nov 21 09:08 input.tar.gz
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas         0 Nov 21 09:08 boinc_lockfile
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas      2785 Nov 21 09:08 pandaJob.out
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas        57 Nov 21 09:08 setup.sh.local
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas    989817 Nov 21 09:08 agis_schedconf.cvmfs.json
[2025-11-21 21:49:21] drwx------ 5 boincer umatlas      4096 Nov 21 09:09 pilot3
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas       533 Nov 21 21:31 boinc_task_state.xml
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas      5911 Nov 21 21:47 init_data.xml
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas 904749492 Nov 21 21:47 HITS.47533967._000556.pool.root.1
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas        95 Nov 21 21:48 pilot_heartbeat.json
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas      1062 Nov 21 21:48 memory_monitor_summary.json
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas   1526164 Nov 21 21:48 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas   1999218 Nov 21 21:48 log.47533967._000556.job.log.tgz.1
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas      8655 Nov 21 21:48 heartbeat.json
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 21:49 boinc_mmap_file
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas        29 Nov 21 21:49 wrapper_checkpoint.txt
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas      4746 Nov 21 21:49 pilotlog.txt
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas   6293446 Nov 21 21:49 log.47533967._000556.job.log.1
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas       353 Nov 21 21:49 output.list
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas       620 Nov 21 21:49 runtime_log
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas   8314880 Nov 21 21:49 result.tar.gz
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas       667 Nov 21 21:49 z5NMDmUyUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtnIKDmffg5Nm.diag
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas      9338 Nov 21 21:49 runtime_log.err
[2025-11-21 21:49:21] -rw-r--r-- 1 boincer umatlas     21331 Nov 21 21:49 stderr.txt
[2025-11-21 21:49:21] HITS file was successfully produced:
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas 904749492 Nov 21 21:47 shared/HITS.pool.root.1
[2025-11-21 21:49:21]  *** Contents of shared directory: ***
[2025-11-21 21:49:21] total 1290776
[2025-11-21 21:49:21] -rw-r--r-- 2 boincer umatlas 408066602 Nov 21 09:08 ATLAS.root_0
[2025-11-21 21:49:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 09:08 start_atlas.sh
[2025-11-21 21:49:21] -rw-r--r-- 2 boincer umatlas    590107 Nov 21 09:08 input.tar.gz
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas 904749492 Nov 21 21:47 HITS.pool.root.1
[2025-11-21 21:49:21] -rw------- 1 boincer umatlas   8314880 Nov 21 21:49 result.tar.gz
21:49:23 (8956): run_atlas exited; CPU time 345875.163988
21:49:23 (8956): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN