Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:54:12 (862583): wrapper (7.7.26015): starting
08:54:12 (862583): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 08:54:12] Arguments: --nthreads 3
[2025-11-24 08:54:12] Threads: 3
[2025-11-24 08:54:12] Checking for CVMFS
[2025-11-24 08:54:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:54:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:54:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:54:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:54:12] 2.9.2.0 3962960 8173 90236 153238 0 81 32090160 36864000 0 130560 0 3015626 99.917 451139 5848 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 08:54:12] CVMFS is ok
[2025-11-24 08:54:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:54:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:54:12] Further information can be found at the LHC@home message board.
[2025-11-24 08:54:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:54:12] Checking for apptainer binary...
[2025-11-24 08:54:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:54:12] Running /usr/bin/apptainer --version
[2025-11-24 08:54:12] apptainer version 1.4.1-1.1
[2025-11-24 08:54:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:54:12] legendA269a
[2025-11-24 08:54:12] apptainer works
[2025-11-24 08:54:12] Set ATHENA_PROC_NUMBER=3
[2025-11-24 08:54:12] Set ATHENA_CORE_NUMBER=3
[2025-11-24 08:54:12] Starting ATLAS job with PandaID=6894245760
[2025-11-24 08:54:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:07:58]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:07:58] 2025-11-24 16:07:05,571 | INFO     | monitor loop #2254: job 0:6894245760 is in state 'finished'
[2025-11-24 17:07:58] 2025-11-24 16:07:05,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:07:58] 2025-11-24 16:07:05,989 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 17:07:58] 2025-11-24 16:07:05,991 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3807.9219166666667
[2025-11-24 17:07:58] 2025-11-24 16:07:05,992 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894245760/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:07:58] 2025-11-24 16:07:05,992 | INFO     | extracted standard info from prmon json
[2025-11-24 17:07:58] 2025-11-24 16:07:05,992 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:07:58] 2025-11-24 16:07:05,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:07:58] 2025-11-24 16:07:05,995 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:07:58] 2025-11-24 16:07:05,995 | INFO     | sum of square deviations: 35375435370.0
[2025-11-24 17:07:58] 2025-11-24 16:07:05,997 | INFO     | sum of deviations: 202032548695.0001
[2025-11-24 17:07:58] 2025-11-24 16:07:05,997 | INFO     | mean x: 1763985641.0
[2025-11-24 17:07:58] 2025-11-24 16:07:05,997 | INFO     | mean y: 2211826.612371134
[2025-11-24 17:07:58] 2025-11-24 16:07:05,997 | INFO     | intersect: -10072081568.93527
[2025-11-24 17:07:58] 2025-11-24 16:07:05,997 | INFO     | chi2: 4.443270876393632
[2025-11-24 17:07:58] 2025-11-24 16:07:05,998 | INFO     | sum of square deviations: 34292587160.0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,000 | INFO     | sum of deviations: 279138200636.00006
[2025-11-24 17:07:58] 2025-11-24 16:07:06,000 | INFO     | mean x: 1763985488.5
[2025-11-24 17:07:58] 2025-11-24 16:07:06,000 | INFO     | mean y: 2222639.1416666666
[2025-11-24 17:07:58] 2025-11-24 16:07:06,000 | INFO     | intersect: -14356441316.730759
[2025-11-24 17:07:58] 2025-11-24 16:07:06,000 | INFO     | chi2: 2.530954415115453
[2025-11-24 17:07:58] 2025-11-24 16:07:06,000 | INFO     | current chi2=2.530954415115453 (change=43.038484811673364 %)
[2025-11-24 17:07:58] 2025-11-24 16:07:06,000 | INFO     | sum of square deviations: 33232064950.0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,002 | INFO     | sum of deviations: 274662268112.99997
[2025-11-24 17:07:58] 2025-11-24 16:07:06,002 | INFO     | mean x: 1763985336.0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,002 | INFO     | mean y: 2221996.225263158
[2025-11-24 17:07:58] 2025-11-24 16:07:06,002 | INFO     | intersect: -14577077064.26939
[2025-11-24 17:07:58] 2025-11-24 16:07:06,002 | INFO     | chi2: 2.5296619277863823
[2025-11-24 17:07:58] 2025-11-24 16:07:06,002 | INFO     | current chi2=2.5296619277863823 (change=0.05106719114938169 %)
[2025-11-24 17:07:58] 2025-11-24 16:07:06,002 | INFO     | right removable region: 474
[2025-11-24 17:07:58] 2025-11-24 16:07:06,002 | INFO     | sum of square deviations: 34292587160.0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,004 | INFO     | sum of deviations: 97807511477.50006
[2025-11-24 17:07:58] 2025-11-24 16:07:06,004 | INFO     | mean x: 1763985793.5
[2025-11-24 17:07:58] 2025-11-24 16:07:06,004 | INFO     | mean y: 2226485.5145833334
[2025-11-24 17:07:58] 2025-11-24 16:07:06,004 | INFO     | intersect: -5028920914.9109
[2025-11-24 17:07:58] 2025-11-24 16:07:06,005 | INFO     | chi2: 2.2869302310958437
[2025-11-24 17:07:58] 2025-11-24 16:07:06,005 | INFO     | current chi2=2.2869302310958437 (change=48.53047912865434 %)
[2025-11-24 17:07:58] 2025-11-24 16:07:06,005 | INFO     | sum of square deviations: 33232064950.0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,007 | INFO     | sum of deviations: 70486963146.0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,007 | INFO     | mean x: 1763985946.0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,007 | INFO     | mean y: 2230395.7010526317
[2025-11-24 17:07:58] 2025-11-24 16:07:06,007 | INFO     | intersect: -3739276867.0236473
[2025-11-24 17:07:58] 2025-11-24 16:07:06,007 | INFO     | chi2: 2.0285237135242435
[2025-11-24 17:07:58] 2025-11-24 16:07:06,007 | INFO     | current chi2=2.0285237135242435 (change=11.299274199885748 %)
[2025-11-24 17:07:58] 2025-11-24 16:07:06,007 | INFO     | left removable region: 20
[2025-11-24 17:07:58] 2025-11-24 16:07:06,007 | INFO     | sum of square deviations: 29016423117.5
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | sum of deviations: 128341736350.99998
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | mean x: 1763985915.5
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | mean y: 2243548.797356828
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | intersect: -7799993631.754343
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | chi2: 0.08648725330447345
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | current memory leak: 4.42 B/s (using 454 data points, chi2=0.09)
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | could have reported an average CPU frequency of 4017 MHz (20 samples)
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | ..............................
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | . Timing measurements:
[2025-11-24 17:07:58] 2025-11-24 16:07:06,009 | INFO     | . get job = 0 s
[2025-11-24 17:07:58] 2025-11-24 16:07:06,010 | INFO     | . initial setup = 1 s
[2025-11-24 17:07:58] 2025-11-24 16:07:06,010 | INFO     | . payload setup = 3 s
[2025-11-24 17:07:58] 2025-11-24 16:07:06,010 | INFO     | . stage-in = 0 s
[2025-11-24 17:07:58] 2025-11-24 16:07:06,010 | INFO     | . payload execution = 29541 s
[2025-11-24 17:07:58] 2025-11-24 16:07:06,010 | INFO     | . stage-out = 0 s
[2025-11-24 17:07:58] 2025-11-24 16:07:06,010 | INFO     | . log creation = 0 s
[2025-11-24 17:07:58] 2025-11-24 16:07:06,010 | INFO     | ..............................
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | 
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | job summary report
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | --------------------------------------------------
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | PanDA job id: 6894245760
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | task id: 47533967
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | errors: (none)
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | pilot state: finished 
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | transexitcode: 0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | exeerrorcode: 0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | exeerrordiag: 
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | exitcode: 0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | exitmsg: OK
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | cpuconsumptiontime: 87287 s
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | nevents: 1000
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | neventsw: 0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | pid: 872764
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | pgrp: 872764
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | corecount: 3
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | event service: False
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | sizes: {0: 2298808, 3: 2299070, 11: 2299098, 29548: 2338282, 29549: 2348073, 29551: 2348129, 29554: 2348503}
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | --------------------------------------------------
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | 
[2025-11-24 17:07:58] 2025-11-24 16:07:06,040 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,054 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:07:58] 2025-11-24 16:07:06,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:07:58] 2025-11-24 16:07:06,054 | INFO     | job 6894245760 has completed (purged errors)
[2025-11-24 17:07:58] 2025-11-24 16:07:06,054 | INFO     | overall cleanup function is called
[2025-11-24 17:07:58] 2025-11-24 16:07:07,062 | INFO     | --- collectZombieJob: --- 10, [872764]
[2025-11-24 17:07:58] 2025-11-24 16:07:07,063 | INFO     | zombie collector waiting for pid 872764
[2025-11-24 17:07:58] 2025-11-24 16:07:07,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:07:58] 2025-11-24 16:07:07,063 | INFO     | collected zombie processes
[2025-11-24 17:07:58] 2025-11-24 16:07:07,063 | INFO     | will attempt to kill all subprocesses of pid=872764
[2025-11-24 17:07:58] 2025-11-24 16:07:07,105 | INFO     | process IDs to be killed: [872764] (in reverse order)
[2025-11-24 17:07:58] 2025-11-24 16:07:07,130 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:07:58] 2025-11-24 16:07:07,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:07:58] 2025-11-24 16:07:07,131 | INFO     | did not find any defunct processes belonging to 872764
[2025-11-24 17:07:58] 2025-11-24 16:07:07,132 | INFO     | did not find any defunct processes belonging to 872764
[2025-11-24 17:07:58] 2025-11-24 16:07:07,133 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:07:58] 2025-11-24 16:07:07,133 | INFO     | ready for new job
[2025-11-24 17:07:58] 2025-11-24 16:07:07,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:07:58] 2025-11-24 16:07:07,134 | INFO     | ***************************************
[2025-11-24 17:07:58] 2025-11-24 16:07:07,134 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:07:58] 2025-11-24 16:07:07,134 | INFO     | ***************************************
[2025-11-24 17:07:58] 2025-11-24 16:07:07,134 | INFO     | 
[2025-11-24 17:07:58] 2025-11-24 16:07:07,135 | INFO     | architecture information:
[2025-11-24 17:07:58] 2025-11-24 16:07:07,135 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:07:58] 2025-11-24 16:07:07,144 | INFO     | cat /etc/os-release:
[2025-11-24 17:07:58] NAME="CentOS Linux"
[2025-11-24 17:07:58] VERSION="7 (Core)"
[2025-11-24 17:07:58] ID="centos"
[2025-11-24 17:07:58] ID_LIKE="rhel fedora"
[2025-11-24 17:07:58] VERSION_ID="7"
[2025-11-24 17:07:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:07:58] ANSI_COLOR="0;31"
[2025-11-24 17:07:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:07:58] HOME_URL="https://www.centos.org/"
[2025-11-24 17:07:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:07:58] 
[2025-11-24 17:07:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:07:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:07:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:07:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:07:58] 
[2025-11-24 17:07:58] 2025-11-24 16:07:07,144 | INFO     | ***************************************
[2025-11-24 17:07:58] 2025-11-24 16:07:07,648 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 17:07:58] 2025-11-24 16:07:07,661 | INFO     | sufficient remaining disk space (369832755200 B)
[2025-11-24 17:07:58] 2025-11-24 16:07:07,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:07:58] 2025-11-24 16:07:07,661 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:07:58] 2025-11-24 16:07:07,661 | INFO     | update_server=False
[2025-11-24 17:07:58] 2025-11-24 16:07:07,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:07:58] 2025-11-24 16:07:07,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:07:58] 2025-11-24 16:07:08,075 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 17:07:58] 2025-11-24 16:07:08,076 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 17:07:58] 2025-11-24 16:07:08,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:07:58] 2025-11-24 16:07:08,076 | INFO     | will abort loop
[2025-11-24 17:07:58] 2025-11-24 16:07:08,147 | INFO     | all job control threads have been joined
[2025-11-24 17:07:58] 2025-11-24 16:07:08,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:07:58] 2025-11-24 16:07:08,568 | INFO     | all data control threads have been joined
[2025-11-24 17:07:58] 2025-11-24 16:07:08,663 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:08,666 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:08,710 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:08,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:07:58] 2025-11-24 16:07:08,773 | INFO     | all payload control threads have been joined
[2025-11-24 17:07:58] 2025-11-24 16:07:08,966 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,080 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,153 | INFO     | [job] control thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,384 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,514 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,518 | INFO     | [job] validate thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,573 | INFO     | [data] control thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,589 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,683 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,774 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:09,778 | INFO     | [payload] control thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:10,727 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:12,535 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:07:58] 2025-11-24 16:07:38,682 | INFO     | PID=866309 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 17:07:58] 2025-11-24 16:07:38,682 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:07:58] 2025-11-24 16:07:38,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:07:58] 2025-11-24 16:07:38,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:07:58] 2025-11-24 16:07:51,751 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:07:58] 2025-11-24 16:07:53,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139646607918912)>', '<ExcThread(monitor, started 139646247868160)>']
[2025-11-24 17:07:58] 2025-11-24 16:07:53,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:07:58] 2025-11-24 16:07:53,762 | INFO     | [monitor] control thread has ended
[2025-11-24 17:07:58] 2025-11-24 16:07:58,471 | INFO     | all workflow threads have been joined
[2025-11-24 17:07:58] 2025-11-24 16:07:58,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:07:58] 2025-11-24 16:07:58,472 | INFO     | traces error code: 0
[2025-11-24 17:07:58] 2025-11-24 16:07:58,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:07:58] 2025-11-24 16:07:58,523 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:07:58] 2025-11-24 16:07:58,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:07:58] 2025-11-24 16:07:58,528 [wrapper] pilotpid: 866309
[2025-11-24 17:07:58] 2025-11-24 16:07:58,531 [wrapper] Pilot exit status: 0
[2025-11-24 17:07:58] 2025-11-24 16:07:58,539 [wrapper] pandaids: 6894245760
[2025-11-24 17:07:58] 2025-11-24 16:07:58,557 [wrapper] cleanup supervisor_pilot  924124 866310
[2025-11-24 17:07:58] 2025-11-24 16:07:58,559 [wrapper] Test setup, not cleaning
[2025-11-24 17:07:58] 2025-11-24 16:07:58,562 [wrapper] apfmon messages muted
[2025-11-24 17:07:58] 2025-11-24 16:07:58,564 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:07:58] 2025-11-24 16:07:58,567 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:07:58]  *** Error codes and diagnostics ***
[2025-11-24 17:07:58]     "exeErrorCode": 0,
[2025-11-24 17:07:58]     "exeErrorDiag": "",
[2025-11-24 17:07:58]     "pilotErrorCode": 0,
[2025-11-24 17:07:58]     "pilotErrorDiag": "",
[2025-11-24 17:07:58]  *** Listing of results directory ***
[2025-11-24 17:07:58] total 1321396
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc    576529 Nov 21 02:08 pilot3.tar.gz
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc      5112 Nov 21 02:17 queuedata.json
[2025-11-24 17:07:58] -rwx------ 1 boinc boinc     36292 Nov 21 02:18 runpilot2-wrapper.sh
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc       100 Nov 24 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:07:58] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 08:54 run_atlas
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc       105 Nov 24 08:54 job.xml
[2025-11-24 17:07:58] -rw-r--r-- 2 boinc boinc 410474941 Nov 24 08:54 EVNT.47493127._002082.pool.root.1
[2025-11-24 17:07:58] -rw-r--r-- 2 boinc boinc    590102 Nov 24 08:54 input.tar.gz
[2025-11-24 17:07:58] -rw-r--r-- 2 boinc boinc     15847 Nov 24 08:54 start_atlas.sh
[2025-11-24 17:07:58] drwxrwx--x 2 boinc boinc      4096 Nov 24 08:54 shared
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc         0 Nov 24 08:54 boinc_setup_complete
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc      6450 Nov 24 08:54 init_data.xml
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc         0 Nov 24 08:54 boinc_lockfile
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc      2785 Nov 24 08:54 pandaJob.out
[2025-11-24 17:07:58] -rw------- 1 boinc boinc    989786 Nov 24 08:54 agis_schedconf.cvmfs.json
[2025-11-24 17:07:58] drwx------ 5 boinc boinc      4096 Nov 24 08:54 pilot3
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc       531 Nov 24 17:02 boinc_task_state.xml
[2025-11-24 17:07:58] -rw------- 1 boinc boinc 928041327 Nov 24 17:06 HITS.47533967._000536.pool.root.1
[2025-11-24 17:07:58] -rw------- 1 boinc boinc        95 Nov 24 17:06 pilot_heartbeat.json
[2025-11-24 17:07:58] -rw------- 1 boinc boinc      1020 Nov 24 17:06 memory_monitor_summary.json
[2025-11-24 17:07:58] -rw------- 1 boinc boinc   1516227 Nov 24 17:07 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:07:58] -rw------- 1 boinc boinc   1181017 Nov 24 17:07 log.47533967._000536.job.log.tgz.1
[2025-11-24 17:07:58] -rw------- 1 boinc boinc      8567 Nov 24 17:07 heartbeat.json
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc      8192 Nov 24 17:07 boinc_mmap_file
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc        28 Nov 24 17:07 wrapper_checkpoint.txt
[2025-11-24 17:07:58] -rw------- 1 boinc boinc      4937 Nov 24 17:07 pilotlog.txt
[2025-11-24 17:07:58] -rw------- 1 boinc boinc   4157697 Nov 24 17:07 log.47533967._000536.job.log.1
[2025-11-24 17:07:58] -rw------- 1 boinc boinc       353 Nov 24 17:07 output.list
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc       620 Nov 24 17:07 runtime_log
[2025-11-24 17:07:58] -rw------- 1 boinc boinc   5355520 Nov 24 17:07 result.tar.gz
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc      8923 Nov 24 17:07 runtime_log.err
[2025-11-24 17:07:58] -rw------- 1 boinc boinc       670 Nov 24 17:07 llzLDmUyUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbnIKDmy4FP1n.diag
[2025-11-24 17:07:58] -rw-r--r-- 1 boinc boinc     21246 Nov 24 17:07 stderr.txt
[2025-11-24 17:07:58] HITS file was successfully produced:
[2025-11-24 17:07:58] -rw------- 1 boinc boinc 928041327 Nov 24 17:06 shared/HITS.pool.root.1
[2025-11-24 17:07:58]  *** Contents of shared directory: ***
[2025-11-24 17:07:58] total 1312984
[2025-11-24 17:07:58] -rw-r--r-- 2 boinc boinc 410474941 Nov 24 08:54 ATLAS.root_0
[2025-11-24 17:07:58] -rw-r--r-- 2 boinc boinc    590102 Nov 24 08:54 input.tar.gz
[2025-11-24 17:07:58] -rw-r--r-- 2 boinc boinc     15847 Nov 24 08:54 start_atlas.sh
[2025-11-24 17:07:58] -rw------- 1 boinc boinc 928041327 Nov 24 17:06 HITS.pool.root.1
[2025-11-24 17:07:58] -rw------- 1 boinc boinc   5355520 Nov 24 17:07 result.tar.gz
17:08:00 (862583): run_atlas exited; CPU time 87313.984339
17:08:00 (862583): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN