Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:47:11 (1494325): wrapper (7.7.26015): starting
08:47:11 (1494325): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 08:47:11] Arguments: --nthreads 8
[2025-11-21 08:47:11] Threads: 8
[2025-11-21 08:47:11] Checking for CVMFS
[2025-11-21 08:47:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 08:47:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 08:47:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 08:47:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 08:47:12] 2.13.2.0 10847 28717 201268 153129 1 328 38582437 40960001 6205 16776704 0 23581349 99.717 15650748 38434 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 08:47:12] CVMFS is ok
[2025-11-21 08:47:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 08:47:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 08:47:12] Further information can be found at the LHC@home message board.
[2025-11-21 08:47:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 08:47:12] Checking for apptainer binary...
[2025-11-21 08:47:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 08:47:12] Running /usr/bin/apptainer --version
[2025-11-21 08:47:12] apptainer version 1.4.4-1.el9
[2025-11-21 08:47:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 08:47:12] c-210-35-4.aglt2.org
[2025-11-21 08:47:12] apptainer works
[2025-11-21 08:47:12] Set ATHENA_PROC_NUMBER=8
[2025-11-21 08:47:12] Set ATHENA_CORE_NUMBER=8
[2025-11-21 08:47:12] Starting ATLAS job with PandaID=6893878723
[2025-11-21 08:47:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:20:04 (1494325): BOINC client no longer exists - exiting
05:20:04 (1494325): timer handler: client dead, exiting
05:32:01 (1314136): wrapper (7.7.26015): starting
05:32:01 (1314136): wrapper: running run_atlas (--nthreads 10)
[2025-11-23 05:32:01] Arguments: --nthreads 10
[2025-11-23 05:32:01] Threads: 10
[2025-11-23 05:32:01] This job has been restarted, cleaning up previous attempt
[2025-11-23 05:32:02] Checking for CVMFS
[2025-11-23 05:32:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 05:32:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 05:32:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 05:32:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 05:32:03] 2.13.2.0 10847 31402 261040 153205 0 89 29248216 40960001 9907 16776704 0 29082464 99.705 21667545 40667 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 05:32:03] CVMFS is ok
[2025-11-23 05:32:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 05:32:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 05:32:03] Further information can be found at the LHC@home message board.
[2025-11-23 05:32:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 05:32:03] Checking for apptainer binary...
[2025-11-23 05:32:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 05:32:03] Running /usr/bin/apptainer --version
[2025-11-23 05:32:03] apptainer version 1.4.4-1.el9
[2025-11-23 05:32:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 05:32:04] c-210-35-4.aglt2.org
[2025-11-23 05:32:04] apptainer works
[2025-11-23 05:32:04] Set ATHENA_PROC_NUMBER=10
[2025-11-23 05:32:04] Set ATHENA_CORE_NUMBER=10
[2025-11-23 05:32:04] Starting ATLAS job with PandaID=6893878723
[2025-11-23 05:32:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:31:09 (2936160): wrapper (7.7.26015): starting
00:31:09 (2936160): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:31:09] Arguments: --nthreads 9
[2025-11-24 00:31:09] Threads: 9
[2025-11-24 00:31:09] This job has been restarted, cleaning up previous attempt
[2025-11-24 00:31:09] Checking for CVMFS
[2025-11-24 00:31:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:31:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:31:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:31:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:31:11] 2.13.2.0 10847 32541 260776 153235 3 87 40648639 40960001 11108 16776704 0 31368122 99.706 22642994 40125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:31:11] CVMFS is ok
[2025-11-24 00:31:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:31:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:31:11] Further information can be found at the LHC@home message board.
[2025-11-24 00:31:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:31:11] Checking for apptainer binary...
[2025-11-24 00:31:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:31:11] Running /usr/bin/apptainer --version
[2025-11-24 00:31:11] apptainer version 1.4.4-1.el9
[2025-11-24 00:31:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:31:11] c-210-35-4.aglt2.org
[2025-11-24 00:31:11] apptainer works
[2025-11-24 00:31:12] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:31:12] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:31:12] Starting ATLAS job with PandaID=6893878723
[2025-11-24 00:31:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:42:02]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:42:02] 2025-11-25 10:54:16,463 | INFO     | sum of deviations: 7655293707768.124
[2025-11-25 07:42:02] 2025-11-25 10:54:16,463 | INFO     | mean x: 1764015204.0277135
[2025-11-25 07:42:02] 2025-11-25 10:54:16,464 | INFO     | mean y: 3029806.559468822
[2025-11-25 07:42:02] 2025-11-25 10:54:16,464 | INFO     | intersect: -8376834374.089022
[2025-11-25 07:42:02] 2025-11-25 10:54:16,486 | INFO     | chi2: 13.456518443833586
[2025-11-25 07:42:02] 2025-11-25 10:54:16,509 | INFO     | sum of square deviations: 1597578488142.6218
[2025-11-25 07:42:02] 2025-11-25 10:54:16,749 | INFO     | sum of deviations: 8289254360861.475
[2025-11-25 07:42:02] 2025-11-25 10:54:16,750 | INFO     | mean x: 1764015051.5425594
[2025-11-25 07:42:02] 2025-11-25 10:54:16,750 | INFO     | mean y: 3036754.877822814
[2025-11-25 07:42:02] 2025-11-25 10:54:16,750 | INFO     | intersect: -9149796465.619978
[2025-11-25 07:42:02] 2025-11-25 10:54:16,752 | INFO     | chi2: 9.994458946782109
[2025-11-25 07:42:02] 2025-11-25 10:54:16,752 | INFO     | current chi2=9.994458946782109 (change=25.727750543365524 %)
[2025-11-25 07:42:02] 2025-11-25 10:54:16,767 | INFO     | sum of square deviations: 1583748940190.1929
[2025-11-25 07:42:02] 2025-11-25 10:54:17,121 | INFO     | sum of deviations: 8890966814234.87
[2025-11-25 07:42:02] 2025-11-25 10:54:17,121 | INFO     | mean x: 1764014899.058072
[2025-11-25 07:42:02] 2025-11-25 10:54:17,121 | INFO     | mean y: 3043390.0911730547
[2025-11-25 07:42:02] 2025-11-25 10:54:17,121 | INFO     | intersect: -9899913782.81637
[2025-11-25 07:42:02] 2025-11-25 10:54:17,123 | INFO     | chi2: 6.912479514363637
[2025-11-25 07:42:02] 2025-11-25 10:54:17,123 | INFO     | current chi2=6.912479514363637 (change=30.83688120416732 %)
[2025-11-25 07:42:02] 2025-11-25 10:54:17,169 | INFO     | sum of square deviations: 1569999172030.3696
[2025-11-25 07:42:02] 2025-11-25 10:54:17,590 | INFO     | sum of deviations: 9415371625171.83
[2025-11-25 07:42:02] 2025-11-25 10:54:17,590 | INFO     | mean x: 1764014746.5719278
[2025-11-25 07:42:02] 2025-11-25 10:54:17,591 | INFO     | mean y: 3049202.3616773444
[2025-11-25 07:42:02] 2025-11-25 10:54:17,591 | INFO     | intersect: -10575844523.919044
[2025-11-25 07:42:02] 2025-11-25 10:54:17,598 | INFO     | chi2: 4.2223023405801925
[2025-11-25 07:42:02] 2025-11-25 10:54:17,598 | INFO     | current chi2=4.2223023405801925 (change=38.91768746935813 %)
[2025-11-25 07:42:02] 2025-11-25 10:54:17,600 | INFO     | sum of square deviations: 1556326650441.3071
[2025-11-25 07:42:02] 2025-11-25 10:54:17,712 | INFO     | sum of deviations: 9584130439349.959
[2025-11-25 07:42:02] 2025-11-25 10:54:17,712 | INFO     | mean x: 1764014594.0712616
[2025-11-25 07:42:02] 2025-11-25 10:54:17,712 | INFO     | mean y: 3051083.5987149533
[2025-11-25 07:42:02] 2025-11-25 10:54:17,713 | INFO     | intersect: -10860057867.020342
[2025-11-25 07:42:02] 2025-11-25 10:54:17,718 | INFO     | chi2: 3.793136534191927
[2025-11-25 07:42:02] 2025-11-25 10:54:17,719 | INFO     | current chi2=3.793136534191927 (change=10.164260438282422 %)
[2025-11-25 07:42:02] 2025-11-25 10:54:17,719 | INFO     | right removable region: 1711
[2025-11-25 07:42:02] 2025-11-25 10:54:17,721 | INFO     | sum of square deviations: 1597567047087.8894
[2025-11-25 07:42:02] 2025-11-25 10:54:17,863 | INFO     | sum of deviations: 7022104776425.336
[2025-11-25 07:42:02] 2025-11-25 10:54:17,867 | INFO     | mean x: 1764015356.5755646
[2025-11-25 07:42:02] 2025-11-25 10:54:17,868 | INFO     | mean y: 3036742.9131441806
[2025-11-25 07:42:02] 2025-11-25 10:54:17,868 | INFO     | intersect: -7750691455.021728
[2025-11-25 07:42:02] 2025-11-25 10:54:17,869 | INFO     | chi2: 10.403731319534549
[2025-11-25 07:42:02] 2025-11-25 10:54:17,870 | INFO     | current chi2=10.403731319534549 (change=22.686307286993458 %)
[2025-11-25 07:42:02] 2025-11-25 10:54:17,870 | INFO     | left removable region: 10
[2025-11-25 07:42:02] 2025-11-25 10:54:17,875 | INFO     | sum of square deviations: 1526508635043.6401
[2025-11-25 07:42:02] 2025-11-25 10:54:18,009 | INFO     | sum of deviations: 8732131238924.255
[2025-11-25 07:42:02] 2025-11-25 10:54:18,009 | INFO     | mean x: 1764014868.6525574
[2025-11-25 07:42:02] 2025-11-25 10:54:18,009 | INFO     | mean y: 3060790.4961787183
[2025-11-25 07:42:02] 2025-11-25 10:54:18,009 | INFO     | intersect: -10087684185.89729
[2025-11-25 07:42:02] 2025-11-25 10:54:18,011 | INFO     | chi2: 0.39674417193797773
[2025-11-25 07:42:02] 2025-11-25 10:54:18,015 | INFO     | current memory leak: 5.72 B/s (using 1701 data points, chi2=0.40)
[2025-11-25 07:42:02] 2025-11-25 10:54:18,017 | INFO     | could have reported an average CPU frequency of 2712 MHz (61 samples)
[2025-11-25 07:42:02] 2025-11-25 10:54:18,017 | INFO     | ..............................
[2025-11-25 07:42:02] 2025-11-25 10:54:18,017 | INFO     | . Timing measurements:
[2025-11-25 07:42:02] 2025-11-25 10:54:18,017 | INFO     | . get job = 0 s
[2025-11-25 07:42:02] 2025-11-25 10:54:18,017 | INFO     | . initial setup = 3 s
[2025-11-25 07:42:02] 2025-11-25 10:54:18,017 | INFO     | . payload setup = 21 s
[2025-11-25 07:42:02] 2025-11-25 10:54:18,017 | INFO     | . stage-in = 0 s
[2025-11-25 07:42:02] 2025-11-25 10:54:18,017 | INFO     | . payload execution = 105636 s
[2025-11-25 07:42:02] 2025-11-25 10:54:18,017 | INFO     | . stage-out = 12 s
[2025-11-25 07:42:02] 2025-11-25 10:54:18,018 | INFO     | . log creation = 4 s
[2025-11-25 07:42:02] 2025-11-25 10:54:18,018 | INFO     | ..............................
[2025-11-25 07:42:02] 2025-11-25 10:54:18,319 | INFO     | 
[2025-11-25 07:42:02] 2025-11-25 10:54:18,319 | INFO     | job summary report
[2025-11-25 07:42:02] 2025-11-25 10:54:18,319 | INFO     | --------------------------------------------------
[2025-11-25 07:42:02] 2025-11-25 10:54:18,319 | INFO     | PanDA job id: 6893878723
[2025-11-25 07:42:02] 2025-11-25 10:54:18,319 | INFO     | task id: 47523449
[2025-11-25 07:42:02] 2025-11-25 10:54:18,319 | INFO     | errors: (none)
[2025-11-25 07:42:02] 2025-11-25 10:54:18,319 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 07:42:02] 2025-11-25 10:54:18,319 | INFO     | pilot state: finished 
[2025-11-25 07:42:02] 2025-11-25 10:54:18,319 | INFO     | transexitcode: 0
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | exeerrorcode: 0
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | exeerrordiag: 
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | exitcode: 0
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | exitmsg: OK
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | cpuconsumptiontime: 248593 s
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | nevents: 1000
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | neventsw: 0
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | pid: 2987418
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | pgrp: 2987418
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | corecount: 9
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | event service: False
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | sizes: {0: 2297927, 1: 2298612, 2: 2298811, 13: 2298811, 17: 2299129, 23: 2299157, 105659: 2373357, 105660: 2373356, 105673: 2383202, 105676: 2383258, 105714: 2383
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | --------------------------------------------------
[2025-11-25 07:42:02] 2025-11-25 10:54:18,320 | INFO     | 
[2025-11-25 07:42:02] 2025-11-25 10:54:18,321 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-25 07:42:02] 2025-11-25 10:54:18,403 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | job 6893878723 has completed (purged errors)
[2025-11-25 07:42:02] 2025-11-25 10:54:18,405 | INFO     | overall cleanup function is called
[2025-11-25 07:42:02] 2025-11-25 10:54:18,473 | INFO     | PID=2954462 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 07:42:02] 2025-11-25 10:54:18,473 | INFO     | .. there are 13 such processes running
[2025-11-25 07:42:02] 2025-11-25 10:54:19,446 | INFO     | --- collectZombieJob: --- 10, [2987418]
[2025-11-25 07:42:02] 2025-11-25 10:54:19,446 | INFO     | zombie collector waiting for pid 2987418
[2025-11-25 07:42:02] 2025-11-25 10:54:19,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 07:42:02] 2025-11-25 10:54:19,447 | INFO     | collected zombie processes
[2025-11-25 07:42:02] 2025-11-25 10:54:19,447 | INFO     | will attempt to kill all subprocesses of pid=2987418
[2025-11-25 07:42:02] 2025-11-25 10:54:20,000 | INFO     | process IDs to be killed: [2987418] (in reverse order)
[2025-11-25 07:42:02] 2025-11-25 10:54:20,320 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 07:42:02] 2025-11-25 10:54:20,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 07:42:02] 2025-11-25 10:54:20,348 | INFO     | did not find any defunct processes belonging to 2987418
[2025-11-25 07:42:02] 2025-11-25 10:54:20,378 | INFO     | did not find any defunct processes belonging to 2987418
[2025-11-25 07:42:02] 2025-11-25 10:54:20,394 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 07:42:02] 2025-11-25 10:54:20,395 | INFO     | ready for new job
[2025-11-25 07:42:02] 2025-11-25 10:54:20,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 07:42:02] 2025-11-25 10:54:20,418 | INFO     | ***************************************
[2025-11-25 07:42:02] 2025-11-25 10:54:20,430 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 07:42:02] 2025-11-25 10:54:20,430 | INFO     | ***************************************
[2025-11-25 07:42:02] 2025-11-25 10:54:20,430 | INFO     | 
[2025-11-25 07:42:02] 2025-11-25 10:54:20,434 | INFO     | architecture information:
[2025-11-25 07:42:02] 2025-11-25 10:54:20,444 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:42:02] 2025-11-25 10:54:20,535 | INFO     | cat /etc/os-release:
[2025-11-25 07:42:02] NAME="CentOS Linux"
[2025-11-25 07:42:02] VERSION="7 (Core)"
[2025-11-25 07:42:02] ID="centos"
[2025-11-25 07:42:02] ID_LIKE="rhel fedora"
[2025-11-25 07:42:02] VERSION_ID="7"
[2025-11-25 07:42:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:42:02] ANSI_COLOR="0;31"
[2025-11-25 07:42:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:42:02] HOME_URL="https://www.centos.org/"
[2025-11-25 07:42:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:42:02] 
[2025-11-25 07:42:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:42:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:42:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:42:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:42:02] 
[2025-11-25 07:42:02] 2025-11-25 10:54:20,535 | INFO     | ***************************************
[2025-11-25 07:42:02] 2025-11-25 10:54:21,038 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-25 07:42:02] 2025-11-25 10:54:21,083 | INFO     | sufficient remaining disk space (66731376640 B)
[2025-11-25 07:42:02] 2025-11-25 10:54:21,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:42:02] 2025-11-25 10:54:21,084 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:42:02] 2025-11-25 10:54:21,084 | INFO     | update_server=False
[2025-11-25 07:42:02] 2025-11-25 10:54:21,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:42:02] 2025-11-25 10:54:21,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:42:02] 2025-11-25 10:54:21,236 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 07:42:02] 2025-11-25 10:54:21,236 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 07:42:02] 2025-11-25 10:54:21,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:42:02] 2025-11-25 10:54:21,237 | INFO     | will abort loop
[2025-11-25 07:42:02] 2025-11-25 10:54:21,270 | INFO     | all payload control threads have been joined
[2025-11-25 07:42:02] 2025-11-25 10:54:21,574 | INFO     | all job control threads have been joined
[2025-11-25 07:42:02] 2025-11-25 10:54:22,044 | INFO     | all data control threads have been joined
[2025-11-25 07:42:02] 2025-11-25 10:54:22,090 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:22,097 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:22,243 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:22,276 | INFO     | [payload] control thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:22,580 | INFO     | [job] control thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:22,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:42:02] 2025-11-25 10:54:22,855 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:22,860 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:23,050 | INFO     | [data] control thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:23,091 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:23,266 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:23,267 | INFO     | [job] validate thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:23,267 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:23,267 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:23,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:42:02] 2025-11-25 10:54:23,423 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:24,359 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:26,625 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:42:02] 2025-11-25 10:54:54,114 | INFO     | PID=2954462 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 07:42:02] 2025-11-25 10:54:54,117 | INFO     | .. there are 13 such processes running
[2025-11-25 07:42:02] 2025-11-25 10:54:54,130 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:42:02] 2025-11-25 10:54:54,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:42:02] 2025-11-25 10:54:54,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:42:02] 2025-11-25 10:55:01,949 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:42:02] 2025-11-25 10:55:02,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601685899072)>', '<ExcThread(monitor, started 140601047639808)>']
[2025-11-25 07:42:02] 2025-11-25 10:55:03,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:42:02] 2025-11-25 10:55:03,288 | INFO     | [monitor] control thread has ended
[2025-11-25 07:42:02] 2025-11-25 10:55:07,467 | INFO     | all workflow threads have been joined
[2025-11-25 07:42:02] 2025-11-25 10:55:07,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:42:02] 2025-11-25 10:55:07,468 | INFO     | traces error code: 0
[2025-11-25 07:42:02] 2025-11-25 10:55:07,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:42:02] 2025-11-25 10:55:07,969 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:42:02] 2025-11-25 10:55:08,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:42:02] 2025-11-25 10:55:08,067 [wrapper] pilotpid: 2954462
[2025-11-25 07:42:02] 2025-11-25 10:55:08,111 [wrapper] Pilot exit status: 0
[2025-11-25 07:42:02] 2025-11-25 10:55:08,382 [wrapper] pandaids: 6893878723 6893878723 6893878723
[2025-11-25 07:42:02] 2025-11-25 10:55:08,552 [wrapper] cleanup supervisor_pilot 1544183 2954463
[2025-11-25 07:42:02] 2025-11-25 10:55:08,587 [wrapper] Test setup, not cleaning
[2025-11-25 07:42:02] 2025-11-25 10:55:08,603 [wrapper] apfmon messages muted
[2025-11-25 07:42:02] 2025-11-25 10:55:08,609 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:42:02] 2025-11-25 10:55:08,645 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:42:02]  *** Error codes and diagnostics ***
[2025-11-25 07:42:02]     "exeErrorCode": 0,
[2025-11-25 07:42:02]     "exeErrorDiag": "",
[2025-11-25 07:42:02]     "pilotErrorCode": 0,
[2025-11-25 07:42:02]     "pilotErrorDiag": "",
[2025-11-25 07:42:02]  *** Listing of results directory ***
[2025-11-25 07:42:02] total 1730416
[2025-11-25 07:42:02] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 13:04 pilot3.tar.gz
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 13:58 queuedata.json
[2025-11-25 07:42:02] -rwx------. 1 boincer umatlas     36292 Nov 20 14:01 runpilot2-wrapper.sh
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas       100 Nov 21 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:42:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 08:47 run_atlas
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas       105 Nov 21 08:47 job.xml
[2025-11-25 07:42:02] -rw-r--r--. 3 boincer umatlas 410447648 Nov 21 08:47 EVNT.47493127._000814.pool.root.1
[2025-11-25 07:42:02] -rw-r--r--. 3 boincer umatlas 410447648 Nov 21 08:47 ATLAS.root_0
[2025-11-25 07:42:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:47 start_atlas.sh
[2025-11-25 07:42:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 08:47 shared
[2025-11-25 07:42:02] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 08:47 input.tar.gz
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas         0 Nov 21 08:47 boinc_lockfile
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 00:31 pandaJob.out
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas        57 Nov 24 00:31 setup.sh.local
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas    989786 Nov 24 00:31 agis_schedconf.cvmfs.json
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas       534 Nov 25 05:32 boinc_task_state.xml
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas 914999755 Nov 25 05:51 HITS.47523449._008134.pool.root.1
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas      1068 Nov 25 05:53 memory_monitor_summary.json
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas   1516240 Nov 25 05:53 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas   2793925 Nov 25 05:53 log.47523449._008134.job.log.tgz.1
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas      8650 Nov 25 05:54 heartbeat.json
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas        96 Nov 25 05:54 pilot_heartbeat.json
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas      5010 Nov 25 05:55 pilotlog.txt
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas  13269484 Nov 25 05:55 log.47523449._008134.job.log.1
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas       353 Nov 25 05:55 output.list
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas       620 Nov 25 05:55 runtime_log
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas  16087040 Nov 25 05:55 result.tar.gz
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas      9439 Nov 25 05:55 runtime_log.err
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas       918 Nov 25 05:55 O83NDmP5Og8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKQIKDmujYAqm.diag
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas      6845 Nov 25 07:37 init_data.xml
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas        30 Nov 25 07:41 wrapper_checkpoint.txt
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 07:42 boinc_mmap_file
[2025-11-25 07:42:02] -rw-r--r--. 1 boincer umatlas     25789 Nov 25 07:42 stderr.txt
[2025-11-25 07:42:02] HITS file was successfully produced:
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas 914999755 Nov 25 05:51 shared/HITS.pool.root.1
[2025-11-25 07:42:02]  *** Contents of shared directory: ***
[2025-11-25 07:42:02] total 1310696
[2025-11-25 07:42:02] -rw-r--r--. 3 boincer umatlas 410447648 Nov 21 08:47 ATLAS.root_0
[2025-11-25 07:42:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:47 start_atlas.sh
[2025-11-25 07:42:02] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 08:47 input.tar.gz
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas 914999755 Nov 25 05:51 HITS.pool.root.1
[2025-11-25 07:42:02] -rw-------. 1 boincer umatlas  16087040 Nov 25 05:55 result.tar.gz
07:42:03 (2936160): run_atlas exited; CPU time 250105.703930
07:42:03 (2936160): called boinc_finish(0)

</stderr_txt>
]]>

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