Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:40:02 (4073362): wrapper (7.7.26015): starting
08:40:02 (4073362): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 08:40:02] Arguments: --nthreads 8
[2025-11-21 08:40:02] Threads: 8
[2025-11-21 08:40:02] Checking for CVMFS
[2025-11-21 08:40:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 08:40:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 08:40:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 08:40:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 08:40:02] 2.13.2.0 9388 26717 176776 153129 0 81 36251714 39288833 3792 16776704 0 15866903 99.635 11990374 34260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 08:40:02] CVMFS is ok
[2025-11-21 08:40:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 08:40:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 08:40:02] Further information can be found at the LHC@home message board.
[2025-11-21 08:40:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 08:40:02] Checking for apptainer binary...
[2025-11-21 08:40:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 08:40:02] Running /usr/bin/apptainer --version
[2025-11-21 08:40:02] apptainer version 1.4.4-1.el9
[2025-11-21 08:40:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 08:40:02] c-210-25.aglt2.org
[2025-11-21 08:40:02] apptainer works
[2025-11-21 08:40:02] Set ATHENA_PROC_NUMBER=8
[2025-11-21 08:40:02] Set ATHENA_CORE_NUMBER=8
[2025-11-21 08:40:02] Starting ATLAS job with PandaID=6894245584
[2025-11-21 08:40:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:03:06]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:03:06] 2025-11-23 07:16:28,526 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:03:06] 2025-11-23 07:16:29,930 | INFO     | time since job start (149776s) is within the limit (172800.0s)
[2025-11-23 03:03:06] 2025-11-23 07:16:29,957 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 03:03:06] 2025-11-23 07:16:30,348 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1678750000005
[2025-11-23 03:03:06] 2025-11-23 07:16:30,545 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894245584/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:03:06] 2025-11-23 07:16:30,546 | INFO     | extracted standard info from prmon json
[2025-11-23 03:03:06] 2025-11-23 07:16:30,546 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:03:06] 2025-11-23 07:16:30,546 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:03:06] 2025-11-23 07:16:31,206 | INFO     | monitor loop #8559: job 0:6894245584 is in state 'finished'
[2025-11-23 03:03:06] 2025-11-23 07:16:31,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:03:06] 2025-11-23 07:16:31,735 | INFO     | fitting pss+swap vs Time
[2025-11-23 03:03:06] 2025-11-23 07:16:31,787 | INFO     | sum of square deviations: 4576913323324.882
[2025-11-23 03:03:06] 2025-11-23 07:16:32,012 | INFO     | time since job start (149779s) is within the limit (172800.0s)
[2025-11-23 03:03:06] 2025-11-23 07:16:34,194 | INFO     | monitor loop #8560: job 0:6894245584 is in state 'finished'
[2025-11-23 03:03:06] 2025-11-23 07:16:34,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:03:06] 2025-11-23 07:16:34,392 | INFO     | time since job start (149781s) is within the limit (172800.0s)
[2025-11-23 03:03:06] 2025-11-23 07:16:36,592 | INFO     | time since job start (149783s) is within the limit (172800.0s)
[2025-11-23 03:03:06] 2025-11-23 07:16:36,742 | INFO     | sum of deviations: -1683338058541.9436
[2025-11-23 03:03:06] 2025-11-23 07:16:36,847 | INFO     | mean x: 1763807229.400326
[2025-11-23 03:03:06] 2025-11-23 07:16:36,847 | INFO     | mean y: 2975979.9388503875
[2025-11-23 03:03:06] 2025-11-23 07:16:36,847 | INFO     | intersect: 651684755.3595982
[2025-11-23 03:03:06] 2025-11-23 07:16:36,998 | INFO     | chi2: 41.4960633478754
[2025-11-23 03:03:06] 2025-11-23 07:16:37,258 | INFO     | monitor loop #8561: job 0:6894245584 is in state 'finished'
[2025-11-23 03:03:06] 2025-11-23 07:16:37,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:03:06] 2025-11-23 07:16:37,266 | INFO     | sum of square deviations: 4548987578629.647
[2025-11-23 03:03:06] 2025-11-23 07:16:38,679 | INFO     | time since job start (149785s) is within the limit (172800.0s)
[2025-11-23 03:03:06] 2025-11-23 07:16:39,309 | INFO     | sum of deviations: -641736873017.7869
[2025-11-23 03:03:06] 2025-11-23 07:16:39,309 | INFO     | mean x: 1763807076.9133987
[2025-11-23 03:03:06] 2025-11-23 07:16:39,310 | INFO     | mean y: 2981667.5482026143
[2025-11-23 03:03:06] 2025-11-23 07:16:39,310 | INFO     | intersect: 251806272.71145192
[2025-11-23 03:03:06] 2025-11-23 07:16:39,340 | INFO     | chi2: 36.62596499924786
[2025-11-23 03:03:06] 2025-11-23 07:16:39,341 | INFO     | current chi2=36.62596499924786 (change=11.736290037442517 %)
[2025-11-23 03:03:06] 2025-11-23 07:16:39,341 | INFO     | right removable region: 2447
[2025-11-23 03:03:06] 2025-11-23 07:16:39,345 | INFO     | sum of square deviations: 4548978001629.643
[2025-11-23 03:03:06] 2025-11-23 07:16:39,824 | INFO     | monitor loop #8562: job 0:6894245584 is in state 'finished'
[2025-11-23 03:03:06] 2025-11-23 07:16:39,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:03:06] 2025-11-23 07:16:40,112 | INFO     | sum of deviations: -2270627455093.016
[2025-11-23 03:03:06] 2025-11-23 07:16:40,112 | INFO     | mean x: 1763807381.9133987
[2025-11-23 03:03:06] 2025-11-23 07:16:40,112 | INFO     | mean y: 2979184.1131535945
[2025-11-23 03:03:06] 2025-11-23 07:16:40,112 | INFO     | intersect: 883385610.6629299
[2025-11-23 03:03:06] 2025-11-23 07:16:40,120 | INFO     | chi2: 39.72931468651778
[2025-11-23 03:03:06] 2025-11-23 07:16:40,120 | INFO     | current chi2=39.72931468651778 (change=4.25762956487311 %)
[2025-11-23 03:03:06] 2025-11-23 07:16:40,120 | INFO     | left removable region: 10
[2025-11-23 03:03:06] 2025-11-23 07:16:40,130 | INFO     | sum of square deviations: 4487932553514.917
[2025-11-23 03:03:06] 2025-11-23 07:16:40,783 | INFO     | time since job start (149787s) is within the limit (172800.0s)
[2025-11-23 03:03:06] 2025-11-23 07:16:41,543 | INFO     | sum of deviations: -1188245499959.9287
[2025-11-23 03:03:06] 2025-11-23 07:16:41,544 | INFO     | mean x: 1763807351.4415264
[2025-11-23 03:03:06] 2025-11-23 07:16:41,544 | INFO     | mean y: 2986950.2285597045
[2025-11-23 03:03:06] 2025-11-23 07:16:41,544 | INFO     | intersect: 469980632.3205934
[2025-11-23 03:03:06] 2025-11-23 07:16:41,547 | INFO     | chi2: 33.79306410165321
[2025-11-23 03:03:06] 2025-11-23 07:16:41,548 | INFO     | current memory leak: -0.26 B/s (using 2437 data points, chi2=33.79)
[2025-11-23 03:03:06] 2025-11-23 07:16:41,550 | INFO     | could have reported an average CPU frequency of 2600 MHz (84 samples)
[2025-11-23 03:03:06] 2025-11-23 07:16:41,550 | INFO     | ..............................
[2025-11-23 03:03:06] 2025-11-23 07:16:41,550 | INFO     | . Timing measurements:
[2025-11-23 03:03:06] 2025-11-23 07:16:41,550 | INFO     | . get job = 0 s
[2025-11-23 03:03:06] 2025-11-23 07:16:41,550 | INFO     | . initial setup = 2 s
[2025-11-23 03:03:06] 2025-11-23 07:16:41,551 | INFO     | . payload setup = 5 s
[2025-11-23 03:03:06] 2025-11-23 07:16:41,551 | INFO     | . stage-in = 0 s
[2025-11-23 03:03:06] 2025-11-23 07:16:41,551 | INFO     | . payload execution = 149627 s
[2025-11-23 03:03:06] 2025-11-23 07:16:41,551 | INFO     | . stage-out = 33 s
[2025-11-23 03:03:06] 2025-11-23 07:16:41,551 | INFO     | . log creation = 21 s
[2025-11-23 03:03:06] 2025-11-23 07:16:41,551 | INFO     | ..............................
[2025-11-23 03:03:06] 2025-11-23 07:16:42,484 | INFO     | 
[2025-11-23 03:03:06] 2025-11-23 07:16:42,484 | INFO     | job summary report
[2025-11-23 03:03:06] 2025-11-23 07:16:42,484 | INFO     | --------------------------------------------------
[2025-11-23 03:03:06] 2025-11-23 07:16:42,484 | INFO     | PanDA job id: 6894245584
[2025-11-23 03:03:06] 2025-11-23 07:16:42,484 | INFO     | task id: 47533967
[2025-11-23 03:03:06] 2025-11-23 07:16:42,484 | INFO     | errors: (none)
[2025-11-23 03:03:06] 2025-11-23 07:16:42,485 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:03:06] 2025-11-23 07:16:42,485 | INFO     | pilot state: finished 
[2025-11-23 03:03:06] 2025-11-23 07:16:42,485 | INFO     | transexitcode: 0
[2025-11-23 03:03:06] 2025-11-23 07:16:42,485 | INFO     | exeerrorcode: 0
[2025-11-23 03:03:06] 2025-11-23 07:16:42,485 | INFO     | exeerrordiag: 
[2025-11-23 03:03:06] 2025-11-23 07:16:42,485 | INFO     | exitcode: 0
[2025-11-23 03:03:06] 2025-11-23 07:16:42,485 | INFO     | exitmsg: OK
[2025-11-23 03:03:06] 2025-11-23 07:16:42,485 | INFO     | cpuconsumptiontime: 305566 s
[2025-11-23 03:03:06] 2025-11-23 07:16:42,485 | INFO     | nevents: 1000
[2025-11-23 03:03:06] 2025-11-23 07:16:42,486 | INFO     | neventsw: 0
[2025-11-23 03:03:06] 2025-11-23 07:16:42,486 | INFO     | pid: 4084873
[2025-11-23 03:03:06] 2025-11-23 07:16:42,486 | INFO     | pgrp: 4084873
[2025-11-23 03:03:06] 2025-11-23 07:16:42,486 | INFO     | corecount: 8
[2025-11-23 03:03:06] 2025-11-23 07:16:42,486 | INFO     | event service: False
[2025-11-23 03:03:06] 2025-11-23 07:16:42,486 | INFO     | sizes: {0: 2298805, 1: 2298805, 3: 2299095, 11: 2299123, 149638: 2393061, 149640: 2393060, 149677: 2402238, 149678: 2402294, 149774: 2402540}
[2025-11-23 03:03:06] 2025-11-23 07:16:42,486 | INFO     | --------------------------------------------------
[2025-11-23 03:03:06] 2025-11-23 07:16:42,486 | INFO     | 
[2025-11-23 03:03:06] 2025-11-23 07:16:42,487 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-23 03:03:06] 2025-11-23 07:16:42,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,968 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:03:06] 2025-11-23 07:16:42,969 | INFO     | job 6894245584 has completed (purged errors)
[2025-11-23 03:03:06] 2025-11-23 07:16:42,969 | INFO     | overall cleanup function is called
[2025-11-23 03:03:06] 2025-11-23 07:16:44,251 | INFO     | --- collectZombieJob: --- 10, [4084873]
[2025-11-23 03:03:06] 2025-11-23 07:16:44,251 | INFO     | zombie collector waiting for pid 4084873
[2025-11-23 03:03:06] 2025-11-23 07:16:44,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:03:06] 2025-11-23 07:16:44,251 | INFO     | collected zombie processes
[2025-11-23 03:03:06] 2025-11-23 07:16:44,251 | INFO     | will attempt to kill all subprocesses of pid=4084873
[2025-11-23 03:03:06] 2025-11-23 07:16:49,476 | INFO     | PID=4077955 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 03:03:06] 2025-11-23 07:16:49,618 | INFO     | .. there are 9 such processes running
[2025-11-23 03:03:06] 2025-11-23 07:16:50,039 | INFO     | process IDs to be killed: [4084873] (in reverse order)
[2025-11-23 03:03:06] 2025-11-23 07:16:51,558 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:03:06] 2025-11-23 07:16:51,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:03:06] 2025-11-23 07:16:51,604 | INFO     | did not find any defunct processes belonging to 4084873
[2025-11-23 03:03:06] 2025-11-23 07:16:51,639 | INFO     | did not find any defunct processes belonging to 4084873
[2025-11-23 03:03:06] 2025-11-23 07:16:51,665 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:03:06] 2025-11-23 07:16:51,665 | INFO     | ready for new job
[2025-11-23 03:03:06] 2025-11-23 07:16:51,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:03:06] 2025-11-23 07:16:51,703 | INFO     | ***************************************
[2025-11-23 03:03:06] 2025-11-23 07:16:51,703 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:03:06] 2025-11-23 07:16:51,703 | INFO     | ***************************************
[2025-11-23 03:03:06] 2025-11-23 07:16:51,703 | INFO     | 
[2025-11-23 03:03:06] 2025-11-23 07:16:51,705 | INFO     | architecture information:
[2025-11-23 03:03:06] 2025-11-23 07:16:51,722 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:03:06] 2025-11-23 07:16:51,909 | INFO     | cat /etc/os-release:
[2025-11-23 03:03:06] NAME="CentOS Linux"
[2025-11-23 03:03:06] VERSION="7 (Core)"
[2025-11-23 03:03:06] ID="centos"
[2025-11-23 03:03:06] ID_LIKE="rhel fedora"
[2025-11-23 03:03:06] VERSION_ID="7"
[2025-11-23 03:03:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:03:06] ANSI_COLOR="0;31"
[2025-11-23 03:03:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:03:06] HOME_URL="https://www.centos.org/"
[2025-11-23 03:03:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:03:06] 
[2025-11-23 03:03:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:03:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:03:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:03:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:03:06] 
[2025-11-23 03:03:06] 2025-11-23 07:16:51,909 | INFO     | ***************************************
[2025-11-23 03:03:06] 2025-11-23 07:16:52,416 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-23 03:03:06] 2025-11-23 07:16:52,707 | INFO     | sufficient remaining disk space (48710549504 B)
[2025-11-23 03:03:06] 2025-11-23 07:16:52,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:03:06] 2025-11-23 07:16:52,708 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:03:06] 2025-11-23 07:16:52,708 | INFO     | update_server=False
[2025-11-23 03:03:06] 2025-11-23 07:16:52,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:03:06] 2025-11-23 07:16:52,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:03:06] 2025-11-23 07:16:52,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:03:06] 2025-11-23 07:16:52,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:03:06] 2025-11-23 07:16:52,732 | INFO     | aborting loop
[2025-11-23 03:03:06] 2025-11-23 07:16:53,260 | INFO     | all data control threads have been joined
[2025-11-23 03:03:06] 2025-11-23 07:16:53,628 | INFO     | all job control threads have been joined
[2025-11-23 03:03:06] 2025-11-23 07:16:53,716 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:53,757 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:53,766 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:53,847 | INFO     | [job] validate thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,074 | INFO     | all payload control threads have been joined
[2025-11-23 03:03:06] 2025-11-23 07:16:54,128 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,137 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,287 | INFO     | [data] control thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,545 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,674 | INFO     | [job] control thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,783 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,785 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,798 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:54,858 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:55,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:03:06] 2025-11-23 07:16:55,080 | INFO     | [payload] control thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:16:59,084 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:03:06] 2025-11-23 07:17:07,197 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:03:06] 2025-11-23 07:17:09,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152854136640)>', '<ExcThread(monitor, started 140152215164672)>']
[2025-11-23 03:03:06] 2025-11-23 07:17:14,265 | INFO     | all workflow threads have been joined
[2025-11-23 03:03:06] 2025-11-23 07:17:14,265 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:03:06] 2025-11-23 07:17:14,265 | INFO     | traces error code: 0
[2025-11-23 03:03:06] 2025-11-23 07:17:14,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:03:06] 2025-11-23 07:17:27,089 | INFO     | PID=4077955 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 03:03:06] 2025-11-23 07:17:27,089 | INFO     | .. there are 9 such processes running
[2025-11-23 03:03:06] 2025-11-23 07:17:27,139 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:03:06] 2025-11-23 07:17:27,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:03:06] 2025-11-23 07:17:27,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:03:06] 2025-11-23 07:17:27,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:03:06] 2025-11-23 07:17:27,140 | INFO     | [monitor] control thread has ended
[2025-11-23 03:03:06] 2025-11-23 07:17:30,992 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:03:06] 2025-11-23 07:17:31,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:03:06] 2025-11-23 07:17:31,088 [wrapper] pilotpid: 4077955
[2025-11-23 03:03:06] 2025-11-23 07:17:31,145 [wrapper] Pilot exit status: 0
[2025-11-23 03:03:06] 2025-11-23 07:17:31,373 [wrapper] pandaids: 6894245584
[2025-11-23 03:03:06] 2025-11-23 07:17:32,159 [wrapper] cleanup supervisor_pilot 3488528 4077956
[2025-11-23 03:03:06] 2025-11-23 07:17:32,233 [wrapper] Test setup, not cleaning
[2025-11-23 03:03:06] 2025-11-23 07:17:32,310 [wrapper] apfmon messages muted
[2025-11-23 03:03:06] 2025-11-23 07:17:32,369 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:03:06] 2025-11-23 07:17:32,419 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:03:06]  *** Error codes and diagnostics ***
[2025-11-23 03:03:06]     "exeErrorCode": 0,
[2025-11-23 03:03:06]     "exeErrorDiag": "",
[2025-11-23 03:03:06]     "pilotErrorCode": 0,
[2025-11-23 03:03:06]     "pilotErrorDiag": "",
[2025-11-23 03:03:06]  *** Listing of results directory ***
[2025-11-23 03:03:06] total 1341700
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 20:08 pilot3.tar.gz
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 20:16 queuedata.json
[2025-11-23 03:03:06] -rwx------. 1 boincer umatlas     36292 Nov 20 20:16 runpilot2-wrapper.sh
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas       100 Nov 21 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:03:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 08:40 run_atlas
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas       105 Nov 21 08:40 job.xml
[2025-11-23 03:03:06] -rw-r--r--. 2 boincer umatlas 408824433 Nov 21 08:40 EVNT.47493127._002077.pool.root.1
[2025-11-23 03:03:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 08:40 shared
[2025-11-23 03:03:06] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 08:40 input.tar.gz
[2025-11-23 03:03:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:40 start_atlas.sh
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas         0 Nov 21 08:40 boinc_lockfile
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 08:40 pandaJob.out
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas        57 Nov 21 08:40 setup.sh.local
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas    989817 Nov 21 08:40 agis_schedconf.cvmfs.json
[2025-11-23 03:03:06] drwx------. 5 boincer umatlas      4096 Nov 21 08:40 pilot3
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas       533 Nov 23 01:01 boinc_task_state.xml
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas 918430838 Nov 23 02:05 HITS.47533967._000490.pool.root.1
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas      1070 Nov 23 02:14 memory_monitor_summary.json
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas   1526164 Nov 23 02:14 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas   3117561 Nov 23 02:15 log.47533967._000490.job.log.tgz.1
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas      8650 Nov 23 02:16 heartbeat.json
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas        95 Nov 23 02:17 pilot_heartbeat.json
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas       822 Nov 23 02:17 pilotlog.txt
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas  18242077 Nov 23 02:17 log.47533967._000490.job.log.1
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas       353 Nov 23 02:17 output.list
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas       620 Nov 23 02:17 runtime_log
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas  21381120 Nov 23 02:17 result.tar.gz
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas      9344 Nov 23 02:17 runtime_log.err
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas       667 Nov 23 02:17 DQyLDm5vUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6mIKDm54tPrn.diag
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas        29 Nov 23 03:03 wrapper_checkpoint.txt
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas      6661 Nov 23 03:03 init_data.xml
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 03:03 boinc_mmap_file
[2025-11-23 03:03:06] -rw-r--r--. 1 boincer umatlas     21876 Nov 23 03:03 stderr.txt
[2025-11-23 03:03:06] HITS file was successfully produced:
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas 918430838 Nov 23 02:05 shared/HITS.pool.root.1
[2025-11-23 03:03:06]  *** Contents of shared directory: ***
[2025-11-23 03:03:06] total 1317636
[2025-11-23 03:03:06] -rw-r--r--. 2 boincer umatlas 408824433 Nov 21 08:40 ATLAS.root_0
[2025-11-23 03:03:06] -rw-r--r--. 2 boincer umatlas    590103 Nov 21 08:40 input.tar.gz
[2025-11-23 03:03:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:40 start_atlas.sh
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas 918430838 Nov 23 02:05 HITS.pool.root.1
[2025-11-23 03:03:06] -rw-------. 1 boincer umatlas  21381120 Nov 23 02:17 result.tar.gz
03:03:08 (4073362): run_atlas exited; CPU time 308168.327577
03:03:08 (4073362): called boinc_finish(0)

</stderr_txt>
]]>

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