Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:37 (247274): wrapper (7.7.26015): starting
10:31:37 (247274): wrapper: running run_atlas (--nthreads 11)
[2025-11-21 10:31:37] Arguments: --nthreads 11
[2025-11-21 10:31:37] Threads: 11
[2025-11-21 10:31:37] Checking for CVMFS
[2025-11-21 10:31:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 10:31:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 10:31:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 10:31:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 10:31:37] 2.13.2.0 6639 26823 229064 153133 3 96 34583190 40960001 3984 16776704 0 35286701 99.707 24526993 41522 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 10:31:37] CVMFS is ok
[2025-11-21 10:31:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 10:31:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 10:31:37] Further information can be found at the LHC@home message board.
[2025-11-21 10:31:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 10:31:37] Checking for apptainer binary...
[2025-11-21 10:31:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 10:31:37] Running /usr/bin/apptainer --version
[2025-11-21 10:31:37] apptainer version 1.4.4-1.el9
[2025-11-21 10:31:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 10:31:37] c-206-37.aglt2.org
[2025-11-21 10:31:37] apptainer works
[2025-11-21 10:31:37] Set ATHENA_PROC_NUMBER=11
[2025-11-21 10:31:37] Set ATHENA_CORE_NUMBER=11
[2025-11-21 10:31:37] Starting ATLAS job with PandaID=6893877100
[2025-11-21 10:31:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 08:01:36]  *** The last 200 lines of the pilot log: ***
[2025-11-22 08:01:36] 2025-11-22 13:00:58,364 | INFO     | sum of square deviations: 624887854928.919
[2025-11-22 08:01:36] 2025-11-22 13:00:58,429 | INFO     | sum of deviations: 1344487855383.152
[2025-11-22 08:01:36] 2025-11-22 13:00:58,429 | INFO     | mean x: 1763777631.1322248
[2025-11-22 08:01:36] 2025-11-22 13:00:58,429 | INFO     | mean y: 3483349.4901029295
[2025-11-22 08:01:36] 2025-11-22 13:00:58,429 | INFO     | intersect: -3791401742.2092485
[2025-11-22 08:01:36] 2025-11-22 13:00:58,430 | INFO     | chi2: 11.24439702445406
[2025-11-22 08:01:36] 2025-11-22 13:00:58,430 | INFO     | current chi2=11.24439702445406 (change=29.380553143190845 %)
[2025-11-22 08:01:36] 2025-11-22 13:00:58,431 | INFO     | sum of square deviations: 617500407736.0638
[2025-11-22 08:01:36] 2025-11-22 13:00:58,495 | INFO     | sum of deviations: 1892109046628.5203
[2025-11-22 08:01:36] 2025-11-22 13:00:58,495 | INFO     | mean x: 1763777478.6605723
[2025-11-22 08:01:36] 2025-11-22 13:00:58,495 | INFO     | mean y: 3494652.5890302067
[2025-11-22 08:01:36] 2025-11-22 13:00:58,495 | INFO     | intersect: -5400970319.100097
[2025-11-22 08:01:36] 2025-11-22 13:00:58,500 | INFO     | chi2: 7.675787463320315
[2025-11-22 08:01:36] 2025-11-22 13:00:58,500 | INFO     | current chi2=7.675787463320315 (change=31.73678013478903 %)
[2025-11-22 08:01:36] 2025-11-22 13:00:58,501 | INFO     | sum of square deviations: 610171473266.1727
[2025-11-22 08:01:36] 2025-11-22 13:00:58,563 | INFO     | sum of deviations: 2401217443551.733
[2025-11-22 08:01:36] 2025-11-22 13:00:58,563 | INFO     | mean x: 1763777326.189146
[2025-11-22 08:01:36] 2025-11-22 13:00:58,563 | INFO     | mean y: 3505242.55387071
[2025-11-22 08:01:36] 2025-11-22 13:00:58,563 | INFO     | intersect: -6937515548.726061
[2025-11-22 08:01:36] 2025-11-22 13:00:58,568 | INFO     | chi2: 4.536845514694913
[2025-11-22 08:01:36] 2025-11-22 13:00:58,568 | INFO     | current chi2=4.536845514694913 (change=40.894070655619615 %)
[2025-11-22 08:01:36] 2025-11-22 13:00:58,569 | INFO     | sum of square deviations: 602900742293.1528
[2025-11-22 08:01:36] 2025-11-22 13:00:58,690 | INFO     | sum of deviations: 2735575826617.765
[2025-11-22 08:01:36] 2025-11-22 13:00:58,691 | INFO     | mean x: 1763777173.7171474
[2025-11-22 08:01:36] 2025-11-22 13:00:58,691 | INFO     | mean y: 3512254.3052884615
[2025-11-22 08:01:36] 2025-11-22 13:00:58,691 | INFO     | intersect: -7999374226.824241
[2025-11-22 08:01:36] 2025-11-22 13:00:58,692 | INFO     | chi2: 3.153926818082018
[2025-11-22 08:01:36] 2025-11-22 13:00:58,692 | INFO     | current chi2=3.153926818082018 (change=30.48194372353213 %)
[2025-11-22 08:01:36] 2025-11-22 13:00:58,693 | INFO     | sum of square deviations: 595686841757.8088
[2025-11-22 08:01:36] 2025-11-22 13:00:58,723 | INFO     | sum of deviations: 2944469785163.2666
[2025-11-22 08:01:36] 2025-11-22 13:00:58,723 | INFO     | mean x: 1763777021.232502
[2025-11-22 08:01:36] 2025-11-22 13:00:58,723 | INFO     | mean y: 3516666.736122285
[2025-11-22 08:01:36] 2025-11-22 13:00:58,723 | INFO     | intersect: -8714802729.84352
[2025-11-22 08:01:36] 2025-11-22 13:00:58,724 | INFO     | chi2: 2.4954810894135164
[2025-11-22 08:01:36] 2025-11-22 13:00:58,724 | INFO     | current chi2=2.4954810894135164 (change=20.877013534160533 %)
[2025-11-22 08:01:36] 2025-11-22 13:00:58,725 | INFO     | right removable region: 1242
[2025-11-22 08:01:36] 2025-11-22 13:00:58,726 | INFO     | sum of square deviations: 624882514405.4434
[2025-11-22 08:01:36] 2025-11-22 13:00:58,756 | INFO     | sum of deviations: 361435751577.7832
[2025-11-22 08:01:36] 2025-11-22 13:00:58,757 | INFO     | mean x: 1763777936.1306412
[2025-11-22 08:01:36] 2025-11-22 13:00:58,757 | INFO     | mean y: 3477799.995249406
[2025-11-22 08:01:36] 2025-11-22 13:00:58,757 | INFO     | intersect: -1016701816.59755
[2025-11-22 08:01:36] 2025-11-22 13:00:58,758 | INFO     | chi2: 14.121567468591145
[2025-11-22 08:01:36] 2025-11-22 13:00:58,758 | INFO     | current chi2=14.121567468591145 (change=11.31073714186676 %)
[2025-11-22 08:01:36] 2025-11-22 13:00:58,758 | INFO     | left removable region: 10
[2025-11-22 08:01:36] 2025-11-22 13:00:58,759 | INFO     | sum of square deviations: 580011536931.7062
[2025-11-22 08:01:36] 2025-11-22 13:00:58,789 | INFO     | sum of deviations: 2531253988645.7593
[2025-11-22 08:01:36] 2025-11-22 13:00:58,789 | INFO     | mean x: 1763777295.7881494
[2025-11-22 08:01:36] 2025-11-22 13:00:58,789 | INFO     | mean y: 3526784.175324675
[2025-11-22 08:01:36] 2025-11-22 13:00:58,790 | INFO     | intersect: -7693851682.922767
[2025-11-22 08:01:36] 2025-11-22 13:00:58,791 | INFO     | chi2: 0.5349516390417928
[2025-11-22 08:01:36] 2025-11-22 13:00:58,791 | INFO     | current memory leak: 4.36 B/s (using 1232 data points, chi2=0.53)
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | could have reported an average CPU frequency of 3272 MHz (46 samples)
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | ..............................
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | . Timing measurements:
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | . get job = 0 s
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | . initial setup = 2 s
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | . payload setup = 5 s
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | . stage-in = 0 s
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | . payload execution = 77310 s
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | . stage-out = 5 s
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | . log creation = 1 s
[2025-11-22 08:01:36] 2025-11-22 13:00:58,792 | INFO     | ..............................
[2025-11-22 08:01:36] 2025-11-22 13:00:59,016 | INFO     | 
[2025-11-22 08:01:36] 2025-11-22 13:00:59,016 | INFO     | job summary report
[2025-11-22 08:01:36] 2025-11-22 13:00:59,016 | INFO     | --------------------------------------------------
[2025-11-22 08:01:36] 2025-11-22 13:00:59,016 | INFO     | PanDA job id: 6893877100
[2025-11-22 08:01:36] 2025-11-22 13:00:59,016 | INFO     | task id: 47523449
[2025-11-22 08:01:36] 2025-11-22 13:00:59,016 | INFO     | errors: (none)
[2025-11-22 08:01:36] 2025-11-22 13:00:59,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | pilot state: finished 
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | transexitcode: 0
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | exeerrorcode: 0
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | exeerrordiag: 
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | exitcode: 0
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | exitmsg: OK
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | cpuconsumptiontime: 196771 s
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | nevents: 1000
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | neventsw: 0
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | pid: 257367
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | pgrp: 257367
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | corecount: 11
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | event service: False
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | sizes: {0: 2298705, 4: 2298967, 11: 2298995, 77317: 2358388, 77318: 2358387, 77324: 2367437, 77327: 2367621, 77336: 2367867}
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | --------------------------------------------------
[2025-11-22 08:01:36] 2025-11-22 13:00:59,017 | INFO     | 
[2025-11-22 08:01:36] 2025-11-22 13:00:59,018 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-22 08:01:36] 2025-11-22 13:00:59,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 08:01:36] 2025-11-22 13:00:59,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 08:01:36] 2025-11-22 13:00:59,087 | INFO     | job 6893877100 has completed (purged errors)
[2025-11-22 08:01:36] 2025-11-22 13:00:59,087 | INFO     | overall cleanup function is called
[2025-11-22 08:01:36] 2025-11-22 13:01:00,174 | INFO     | --- collectZombieJob: --- 10, [257367]
[2025-11-22 08:01:36] 2025-11-22 13:01:00,174 | INFO     | zombie collector waiting for pid 257367
[2025-11-22 08:01:36] 2025-11-22 13:01:00,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 08:01:36] 2025-11-22 13:01:00,174 | INFO     | collected zombie processes
[2025-11-22 08:01:36] 2025-11-22 13:01:00,174 | INFO     | will attempt to kill all subprocesses of pid=257367
[2025-11-22 08:01:36] 2025-11-22 13:01:00,719 | INFO     | process IDs to be killed: [257367] (in reverse order)
[2025-11-22 08:01:36] 2025-11-22 13:01:00,888 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 08:01:36] 2025-11-22 13:01:00,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 08:01:36] 2025-11-22 13:01:00,956 | INFO     | did not find any defunct processes belonging to 257367
[2025-11-22 08:01:36] 2025-11-22 13:01:01,042 | INFO     | did not find any defunct processes belonging to 257367
[2025-11-22 08:01:36] 2025-11-22 13:01:01,073 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 08:01:36] 2025-11-22 13:01:01,073 | INFO     | ready for new job
[2025-11-22 08:01:36] 2025-11-22 13:01:01,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 08:01:36] 2025-11-22 13:01:01,125 | INFO     | ***************************************
[2025-11-22 08:01:36] 2025-11-22 13:01:01,126 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 08:01:36] 2025-11-22 13:01:01,126 | INFO     | ***************************************
[2025-11-22 08:01:36] 2025-11-22 13:01:01,126 | INFO     | 
[2025-11-22 08:01:36] 2025-11-22 13:01:01,277 | INFO     | architecture information:
[2025-11-22 08:01:36] 2025-11-22 13:01:01,285 | INFO     | executing command: cat /etc/os-release
[2025-11-22 08:01:36] 2025-11-22 13:01:01,370 | INFO     | cat /etc/os-release:
[2025-11-22 08:01:36] NAME="CentOS Linux"
[2025-11-22 08:01:36] VERSION="7 (Core)"
[2025-11-22 08:01:36] ID="centos"
[2025-11-22 08:01:36] ID_LIKE="rhel fedora"
[2025-11-22 08:01:36] VERSION_ID="7"
[2025-11-22 08:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 08:01:36] ANSI_COLOR="0;31"
[2025-11-22 08:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 08:01:36] HOME_URL="https://www.centos.org/"
[2025-11-22 08:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 08:01:36] 
[2025-11-22 08:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 08:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 08:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 08:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 08:01:36] 
[2025-11-22 08:01:36] 2025-11-22 13:01:01,372 | INFO     | ***************************************
[2025-11-22 08:01:36] 2025-11-22 13:01:01,876 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-22 08:01:36] 2025-11-22 13:01:01,975 | INFO     | sufficient remaining disk space (78408318976 B)
[2025-11-22 08:01:36] 2025-11-22 13:01:01,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 08:01:36] 2025-11-22 13:01:01,976 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 08:01:36] 2025-11-22 13:01:01,976 | INFO     | update_server=False
[2025-11-22 08:01:36] 2025-11-22 13:01:01,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 08:01:36] 2025-11-22 13:01:01,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 08:01:36] 2025-11-22 13:01:02,082 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 08:01:36] 2025-11-22 13:01:02,082 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 08:01:36] 2025-11-22 13:01:02,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:01:36] 2025-11-22 13:01:02,082 | INFO     | will abort loop
[2025-11-22 08:01:36] 2025-11-22 13:01:02,323 | INFO     | all data control threads have been joined
[2025-11-22 08:01:36] 2025-11-22 13:01:02,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 08:01:36] 2025-11-22 13:01:02,812 | INFO     | all job control threads have been joined
[2025-11-22 08:01:36] 2025-11-22 13:01:02,913 | INFO     | all payload control threads have been joined
[2025-11-22 08:01:36] 2025-11-22 13:01:02,982 | INFO     | [job] retrieve thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:03,017 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:03,088 | INFO     | [job] job monitor thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:03,329 | INFO     | [data] control thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:03,563 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:03,567 | INFO     | [job] validate thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:03,567 | INFO     | [data] copytool_in thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:03,605 | INFO     | [payload] failed_post thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:03,826 | INFO     | [job] control thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:03,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:01:36] 2025-11-22 13:01:03,926 | INFO     | [payload] control thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:04,014 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:04,144 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:04,278 | INFO     | [payload] validate_post thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:04,657 | INFO     | [data] copytool_out thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:04,915 | INFO     | [job] queue monitor thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:05,986 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 08:01:36] 2025-11-22 13:01:07,258 | INFO     | [monitor] cgroup control has ended
[2025-11-22 08:01:36] 2025-11-22 13:01:09,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139994251642688)>', '<ExcThread(monitor, started 139993745958656)>']
[2025-11-22 08:01:36] 2025-11-22 13:01:14,228 | INFO     | all workflow threads have been joined
[2025-11-22 08:01:36] 2025-11-22 13:01:14,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 08:01:36] 2025-11-22 13:01:14,228 | INFO     | traces error code: 0
[2025-11-22 08:01:36] 2025-11-22 13:01:14,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 08:01:36] 2025-11-22 13:01:32,775 | INFO     | PID=251010 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 08:01:36] 2025-11-22 13:01:32,792 | INFO     | .. there are 21 such processes running
[2025-11-22 08:01:36] 2025-11-22 13:01:32,793 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 08:01:36] 2025-11-22 13:01:32,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 08:01:36] 2025-11-22 13:01:32,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 08:01:36] 2025-11-22 13:01:32,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 08:01:36] 2025-11-22 13:01:32,793 | INFO     | [monitor] control thread has ended
[2025-11-22 08:01:36] 2025-11-22 13:01:35,605 [wrapper] ==== pilot stdout END ====
[2025-11-22 08:01:36] 2025-11-22 13:01:35,694 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 08:01:36] 2025-11-22 13:01:35,762 [wrapper] pilotpid: 251010
[2025-11-22 08:01:36] 2025-11-22 13:01:35,850 [wrapper] Pilot exit status: 0
[2025-11-22 08:01:36] 2025-11-22 13:01:35,878 [wrapper] pandaids: 6893877100
[2025-11-22 08:01:36] 2025-11-22 13:01:35,957 [wrapper] cleanup supervisor_pilot 3668949 251011
[2025-11-22 08:01:36] 2025-11-22 13:01:35,963 [wrapper] Test setup, not cleaning
[2025-11-22 08:01:36] 2025-11-22 13:01:35,966 [wrapper] apfmon messages muted
[2025-11-22 08:01:36] 2025-11-22 13:01:35,968 [wrapper] ==== wrapper stdout END ====
[2025-11-22 08:01:36] 2025-11-22 13:01:35,970 [wrapper] ==== wrapper stderr END ====
[2025-11-22 08:01:36]  *** Error codes and diagnostics ***
[2025-11-22 08:01:36]     "exeErrorCode": 0,
[2025-11-22 08:01:36]     "exeErrorDiag": "",
[2025-11-22 08:01:36]     "pilotErrorCode": 0,
[2025-11-22 08:01:36]     "pilotErrorDiag": "",
[2025-11-22 08:01:36]  *** Listing of results directory ***
[2025-11-22 08:01:36] total 1331924
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 13:04 pilot3.tar.gz
[2025-11-22 08:01:36] -rwx------. 1 boincer umatlas     36292 Nov 20 13:06 runpilot2-wrapper.sh
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 13:06 queuedata.json
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas       100 Nov 21 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 08:01:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 10:31 run_atlas
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas       105 Nov 21 10:31 job.xml
[2025-11-22 08:01:36] -rw-r--r--. 2 boincer umatlas 408450817 Nov 21 10:31 EVNT.47493127._000787.pool.root.1
[2025-11-22 08:01:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 10:31 start_atlas.sh
[2025-11-22 08:01:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 10:31 shared
[2025-11-22 08:01:36] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 10:31 input.tar.gz
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas         0 Nov 21 10:31 boinc_lockfile
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas      2784 Nov 21 10:31 pandaJob.out
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas        57 Nov 21 10:31 setup.sh.local
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas    989798 Nov 21 10:31 agis_schedconf.cvmfs.json
[2025-11-22 08:01:36] drwx------. 5 boincer umatlas      4096 Nov 21 10:31 pilot3
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas       533 Nov 22 07:16 boinc_task_state.xml
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas 926626890 Nov 22 07:55 HITS.47523449._007867.pool.root.1
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas      1060 Nov 22 08:00 memory_monitor_summary.json
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas   1526164 Nov 22 08:00 agis_ddmendpoints.agis.ALL.json
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas   2638368 Nov 22 08:00 log.47523449._007867.job.log.tgz.1
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas        95 Nov 22 08:00 pilot_heartbeat.json
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas      7937 Nov 22 08:00 heartbeat.json
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas      6901 Nov 22 08:01 init_data.xml
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas        29 Nov 22 08:01 wrapper_checkpoint.txt
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 08:01 boinc_mmap_file
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas       822 Nov 22 08:01 pilotlog.txt
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas   9807033 Nov 22 08:01 log.47523449._007867.job.log.1
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas       353 Nov 22 08:01 output.list
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas       620 Nov 22 08:01 runtime_log
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas  12462080 Nov 22 08:01 result.tar.gz
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas      9345 Nov 22 08:01 runtime_log.err
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas       665 Nov 22 08:01 JNlKDmdEOg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5NIKDm9Y1UFm.diag
[2025-11-22 08:01:36] -rw-r--r--. 1 boincer umatlas     21176 Nov 22 08:01 stderr.txt
[2025-11-22 08:01:36] HITS file was successfully produced:
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas 926626890 Nov 22 07:55 shared/HITS.pool.root.1
[2025-11-22 08:01:36]  *** Contents of shared directory: ***
[2025-11-22 08:01:36] total 1316568
[2025-11-22 08:01:36] -rw-r--r--. 2 boincer umatlas 408450817 Nov 21 10:31 ATLAS.root_0
[2025-11-22 08:01:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 10:31 start_atlas.sh
[2025-11-22 08:01:36] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 10:31 input.tar.gz
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas 926626890 Nov 22 07:55 HITS.pool.root.1
[2025-11-22 08:01:36] -rw-------. 1 boincer umatlas  12462080 Nov 22 08:01 result.tar.gz
08:01:38 (247274): run_atlas exited; CPU time 196116.317385
08:01:38 (247274): called boinc_finish(0)

</stderr_txt>
]]>

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