Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:30 (3297385): wrapper (7.7.26015): starting
08:21:30 (3297385): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 08:21:30] Arguments: --nthreads 8
[2025-11-21 08:21:30] Threads: 8
[2025-11-21 08:21:30] Checking for CVMFS
[2025-11-21 08:21:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 08:21:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 08:21:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 08:21:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 08:21:31] 2.13.2.0 9630 26694 197004 153129 2 81 34702257 39288832 3816 16776704 0 14356985 99.589 11209383 25992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 08:21:31] CVMFS is ok
[2025-11-21 08:21:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 08:21:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 08:21:31] Further information can be found at the LHC@home message board.
[2025-11-21 08:21:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 08:21:31] Checking for apptainer binary...
[2025-11-21 08:21:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 08:21:31] Running /usr/bin/apptainer --version
[2025-11-21 08:21:31] apptainer version 1.4.4-1.el9
[2025-11-21 08:21:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 08:21:31] c-211-17.aglt2.org
[2025-11-21 08:21:31] apptainer works
[2025-11-21 08:21:31] Set ATHENA_PROC_NUMBER=8
[2025-11-21 08:21:31] Set ATHENA_CORE_NUMBER=8
[2025-11-21 08:21:31] Starting ATLAS job with PandaID=6894245561
[2025-11-21 08:21:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:10:17 (2279504): wrapper (7.7.26015): starting
21:10:17 (2279504): wrapper: running run_atlas (--nthreads 10)
[2025-11-22 21:10:17] Arguments: --nthreads 10
[2025-11-22 21:10:17] Threads: 10
[2025-11-22 21:10:17] This job has been restarted, cleaning up previous attempt
[2025-11-22 21:10:17] Checking for CVMFS
[2025-11-22 21:10:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 21:10:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 21:10:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 21:10:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 21:10:17] 2.13.2.0 9630 28903 184212 153192 0 141 22810849 39288832 5058 16776704 0 17716681 99.625 13076059 26944 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 21:10:17] CVMFS is ok
[2025-11-22 21:10:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 21:10:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 21:10:17] Further information can be found at the LHC@home message board.
[2025-11-22 21:10:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 21:10:17] Checking for apptainer binary...
[2025-11-22 21:10:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 21:10:17] Running /usr/bin/apptainer --version
[2025-11-22 21:10:17] apptainer version 1.4.4-1.el9
[2025-11-22 21:10:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 21:10:18] c-211-17.aglt2.org
[2025-11-22 21:10:18] apptainer works
[2025-11-22 21:10:18] Set ATHENA_PROC_NUMBER=10
[2025-11-22 21:10:18] Set ATHENA_CORE_NUMBER=10
[2025-11-22 21:10:18] Starting ATLAS job with PandaID=6894245561
[2025-11-22 21:10:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:29:13 (2593569): wrapper (7.7.26015): starting
00:29:13 (2593569): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:29:13] Arguments: --nthreads 8
[2025-11-23 00:29:13] Threads: 8
[2025-11-23 00:29:13] This job has been restarted, cleaning up previous attempt
[2025-11-23 00:29:13] Checking for CVMFS
[2025-11-23 00:29:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:29:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:29:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:29:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:29:15] 2.13.2.0 9630 29102 172788 153198 1 75 25520405 39288833 7902 16776704 0 18061974 99.617 14226893 27580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:29:15] CVMFS is ok
[2025-11-23 00:29:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:29:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:29:15] Further information can be found at the LHC@home message board.
[2025-11-23 00:29:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:29:15] Checking for apptainer binary...
[2025-11-23 00:29:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:29:15] Running /usr/bin/apptainer --version
[2025-11-23 00:29:15] apptainer version 1.4.4-1.el9
[2025-11-23 00:29:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:29:16] c-211-17.aglt2.org
[2025-11-23 00:29:16] apptainer works
[2025-11-23 00:29:16] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:29:16] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:29:16] Starting ATLAS job with PandaID=6894245561
[2025-11-23 00:29:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 20:00:07]  *** The last 200 lines of the pilot log: ***
[2025-11-24 20:00:07] 2025-11-25 00:59:32,060 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.876975
[2025-11-24 20:00:07] 2025-11-25 00:59:32,067 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894245561/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 20:00:07] 2025-11-25 00:59:32,068 | INFO     | extracted standard info from prmon json
[2025-11-24 20:00:07] 2025-11-25 00:59:32,068 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 20:00:07] 2025-11-25 00:59:32,068 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 20:00:07] 2025-11-25 00:59:32,119 | INFO     | fitting pss+swap vs Time
[2025-11-24 20:00:07] 2025-11-25 00:59:32,123 | INFO     | sum of square deviations: 5238526174348.678
[2025-11-24 20:00:07] 2025-11-25 00:59:32,221 | INFO     | monitor loop #8631: job 0:6894245561 is in state 'finished'
[2025-11-24 20:00:07] 2025-11-25 00:59:32,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 20:00:07] 2025-11-25 00:59:32,293 | INFO     | sum of deviations: 14110706356303.045
[2025-11-24 20:00:07] 2025-11-25 00:59:32,294 | INFO     | mean x: 1763954117.4240062
[2025-11-24 20:00:07] 2025-11-25 00:59:32,294 | INFO     | mean y: 2947814.512860483
[2025-11-24 20:00:07] 2025-11-25 00:59:32,294 | INFO     | intersect: -4748510467.559498
[2025-11-24 20:00:07] 2025-11-25 00:59:32,298 | INFO     | chi2: 11.280078928858805
[2025-11-24 20:00:07] 2025-11-25 00:59:32,306 | INFO     | sum of square deviations: 5207967310627.206
[2025-11-24 20:00:07] 2025-11-25 00:59:32,485 | INFO     | sum of deviations: 15002395549155.49
[2025-11-24 20:00:07] 2025-11-25 00:59:32,486 | INFO     | mean x: 1763953964.9414291
[2025-11-24 20:00:07] 2025-11-25 00:59:32,486 | INFO     | mean y: 2952263.7633736823
[2025-11-24 20:00:07] 2025-11-25 00:59:32,486 | INFO     | intersect: -5078403577.036906
[2025-11-24 20:00:07] 2025-11-25 00:59:32,489 | INFO     | chi2: 8.097656438291098
[2025-11-24 20:00:07] 2025-11-25 00:59:32,490 | INFO     | current chi2=8.097656438291098 (change=28.212767930425013 %)
[2025-11-24 20:00:07] 2025-11-25 00:59:32,493 | INFO     | sum of square deviations: 5177527565416.669
[2025-11-24 20:00:07] 2025-11-25 00:59:32,697 | INFO     | sum of deviations: 15538872116986.797
[2025-11-24 20:00:07] 2025-11-25 00:59:32,698 | INFO     | mean x: 1763953812.4589202
[2025-11-24 20:00:07] 2025-11-25 00:59:32,698 | INFO     | mean y: 2954950.3079029736
[2025-11-24 20:00:07] 2025-11-25 00:59:32,698 | INFO     | intersect: -5291049256.478899
[2025-11-24 20:00:07] 2025-11-25 00:59:32,701 | INFO     | chi2: 6.706091749634878
[2025-11-24 20:00:07] 2025-11-25 00:59:32,702 | INFO     | current chi2=6.706091749634878 (change=17.18478302038078 %)
[2025-11-24 20:00:07] 2025-11-25 00:59:32,702 | INFO     | right removable region: 2555
[2025-11-24 20:00:07] 2025-11-25 00:59:32,705 | INFO     | sum of square deviations: 5207953342237.198
[2025-11-24 20:00:07] 2025-11-25 00:59:32,889 | INFO     | sum of deviations: 13115365750287.531
[2025-11-24 20:00:07] 2025-11-25 00:59:32,889 | INFO     | mean x: 1763954269.9414291
[2025-11-24 20:00:07] 2025-11-25 00:59:32,890 | INFO     | mean y: 2952779.5037094885
[2025-11-24 20:00:07] 2025-11-25 00:59:32,890 | INFO     | intersect: -4439273157.78265
[2025-11-24 20:00:07] 2025-11-25 00:59:32,894 | INFO     | chi2: 7.598294937987184
[2025-11-24 20:00:07] 2025-11-25 00:59:32,894 | INFO     | current chi2=7.598294937987184 (change=32.63970060929444 %)
[2025-11-24 20:00:07] 2025-11-25 00:59:32,897 | INFO     | sum of square deviations: 5177499784630.605
[2025-11-24 20:00:07] 2025-11-25 00:59:33,114 | INFO     | sum of deviations: 12518793989476.598
[2025-11-24 20:00:07] 2025-11-25 00:59:33,115 | INFO     | mean x: 1763954422.458529
[2025-11-24 20:00:07] 2025-11-25 00:59:33,115 | INFO     | mean y: 2955766.444053208
[2025-11-24 20:00:07] 2025-11-25 00:59:33,115 | INFO     | intersect: -4262149581.7273912
[2025-11-24 20:00:07] 2025-11-25 00:59:33,119 | INFO     | chi2: 6.325810257350888
[2025-11-24 20:00:07] 2025-11-25 00:59:33,119 | INFO     | current chi2=6.325810257350888 (change=16.74697667070794 %)
[2025-11-24 20:00:07] 2025-11-25 00:59:33,120 | INFO     | left removable region: 20
[2025-11-24 20:00:07] 2025-11-25 00:59:33,123 | INFO     | sum of square deviations: 5050922619419.13
[2025-11-24 20:00:07] 2025-11-25 00:59:33,323 | INFO     | sum of deviations: 13464577504253.191
[2025-11-24 20:00:07] 2025-11-25 00:59:33,324 | INFO     | mean x: 1763954392.0272188
[2025-11-24 20:00:07] 2025-11-25 00:59:33,324 | INFO     | mean y: 2965887.3885601577
[2025-11-24 20:00:07] 2025-11-25 00:59:33,324 | INFO     | intersect: -4699323657.516352
[2025-11-24 20:00:07] 2025-11-25 00:59:33,327 | INFO     | chi2: 1.3675992335909912
[2025-11-24 20:00:07] 2025-11-25 00:59:33,328 | INFO     | current memory leak: 2.67 B/s (using 2535 data points, chi2=1.37)
[2025-11-24 20:00:07] 2025-11-25 00:59:33,330 | INFO     | could have reported an average CPU frequency of 2599 MHz (88 samples)
[2025-11-24 20:00:07] 2025-11-25 00:59:33,330 | INFO     | ..............................
[2025-11-24 20:00:07] 2025-11-25 00:59:33,331 | INFO     | . Timing measurements:
[2025-11-24 20:00:07] 2025-11-25 00:59:33,331 | INFO     | . get job = 0 s
[2025-11-24 20:00:07] 2025-11-25 00:59:33,331 | INFO     | . initial setup = 3 s
[2025-11-24 20:00:07] 2025-11-25 00:59:33,331 | INFO     | . payload setup = 24 s
[2025-11-24 20:00:07] 2025-11-25 00:59:33,331 | INFO     | . stage-in = 0 s
[2025-11-24 20:00:07] 2025-11-25 00:59:33,331 | INFO     | . payload execution = 156504 s
[2025-11-24 20:00:07] 2025-11-25 00:59:33,331 | INFO     | . stage-out = 4 s
[2025-11-24 20:00:07] 2025-11-25 00:59:33,331 | INFO     | . log creation = 1 s
[2025-11-24 20:00:07] 2025-11-25 00:59:33,331 | INFO     | ..............................
[2025-11-24 20:00:07] 2025-11-25 00:59:33,580 | INFO     | PID=2607599 has CPU usage=19.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 20:00:07] 2025-11-25 00:59:33,580 | INFO     | .. there are 7 such processes running
[2025-11-24 20:00:07] 2025-11-25 00:59:33,852 | INFO     | 
[2025-11-24 20:00:07] 2025-11-25 00:59:33,853 | INFO     | job summary report
[2025-11-24 20:00:07] 2025-11-25 00:59:33,853 | INFO     | --------------------------------------------------
[2025-11-24 20:00:07] 2025-11-25 00:59:33,853 | INFO     | PanDA job id: 6894245561
[2025-11-24 20:00:07] 2025-11-25 00:59:33,853 | INFO     | task id: 47533967
[2025-11-24 20:00:07] 2025-11-25 00:59:33,853 | INFO     | errors: (none)
[2025-11-24 20:00:07] 2025-11-25 00:59:33,853 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 20:00:07] 2025-11-25 00:59:33,853 | INFO     | pilot state: finished 
[2025-11-24 20:00:07] 2025-11-25 00:59:33,853 | INFO     | transexitcode: 0
[2025-11-24 20:00:07] 2025-11-25 00:59:33,853 | INFO     | exeerrorcode: 0
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | exeerrordiag: 
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | exitcode: 0
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | exitmsg: OK
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | cpuconsumptiontime: 309453 s
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | nevents: 1000
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | neventsw: 0
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | pid: 2637519
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | pgrp: 2637519
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | corecount: 8
[2025-11-24 20:00:07] 2025-11-25 00:59:33,854 | INFO     | event service: False
[2025-11-24 20:00:07] 2025-11-25 00:59:33,855 | INFO     | sizes: {0: 2297977, 1: 2298662, 2: 2298861, 12: 2298861, 15: 2299151, 23: 2299179, 156532: 2395273, 156533: 2395272, 156538: 2405113, 156539: 2405169, 156548: 2405
[2025-11-24 20:00:07] 2025-11-25 00:59:33,855 | INFO     | --------------------------------------------------
[2025-11-24 20:00:07] 2025-11-25 00:59:33,855 | INFO     | 
[2025-11-24 20:00:07] 2025-11-25 00:59:33,855 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 20:00:07] 2025-11-25 00:59:33,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,877 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,877 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,878 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,878 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,878 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,879 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 20:00:07] 2025-11-25 00:59:33,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,879 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 20:00:07] 2025-11-25 00:59:33,879 | INFO     | job 6894245561 has completed (purged errors)
[2025-11-24 20:00:07] 2025-11-25 00:59:33,879 | INFO     | overall cleanup function is called
[2025-11-24 20:00:07] 2025-11-25 00:59:34,896 | INFO     | --- collectZombieJob: --- 10, [2637519]
[2025-11-24 20:00:07] 2025-11-25 00:59:34,897 | INFO     | zombie collector waiting for pid 2637519
[2025-11-24 20:00:07] 2025-11-25 00:59:34,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 20:00:07] 2025-11-25 00:59:34,897 | INFO     | collected zombie processes
[2025-11-24 20:00:07] 2025-11-25 00:59:34,897 | INFO     | will attempt to kill all subprocesses of pid=2637519
[2025-11-24 20:00:07] 2025-11-25 00:59:35,170 | INFO     | process IDs to be killed: [2637519] (in reverse order)
[2025-11-24 20:00:07] 2025-11-25 00:59:35,237 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 20:00:07] 2025-11-25 00:59:35,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 20:00:07] 2025-11-25 00:59:35,249 | INFO     | did not find any defunct processes belonging to 2637519
[2025-11-24 20:00:07] 2025-11-25 00:59:35,259 | INFO     | did not find any defunct processes belonging to 2637519
[2025-11-24 20:00:07] 2025-11-25 00:59:35,262 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 20:00:07] 2025-11-25 00:59:35,262 | INFO     | ready for new job
[2025-11-24 20:00:07] 2025-11-25 00:59:35,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 20:00:07] 2025-11-25 00:59:35,273 | INFO     | ***************************************
[2025-11-24 20:00:07] 2025-11-25 00:59:35,273 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 20:00:07] 2025-11-25 00:59:35,273 | INFO     | ***************************************
[2025-11-24 20:00:07] 2025-11-25 00:59:35,273 | INFO     | 
[2025-11-24 20:00:07] 2025-11-25 00:59:35,275 | INFO     | architecture information:
[2025-11-24 20:00:07] 2025-11-25 00:59:35,276 | INFO     | executing command: cat /etc/os-release
[2025-11-24 20:00:07] 2025-11-25 00:59:35,294 | INFO     | cat /etc/os-release:
[2025-11-24 20:00:07] NAME="CentOS Linux"
[2025-11-24 20:00:07] VERSION="7 (Core)"
[2025-11-24 20:00:07] ID="centos"
[2025-11-24 20:00:07] ID_LIKE="rhel fedora"
[2025-11-24 20:00:07] VERSION_ID="7"
[2025-11-24 20:00:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 20:00:07] ANSI_COLOR="0;31"
[2025-11-24 20:00:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 20:00:07] HOME_URL="https://www.centos.org/"
[2025-11-24 20:00:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 20:00:07] 
[2025-11-24 20:00:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 20:00:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 20:00:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 20:00:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 20:00:07] 
[2025-11-24 20:00:07] 2025-11-25 00:59:35,294 | INFO     | ***************************************
[2025-11-24 20:00:07] 2025-11-25 00:59:35,798 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 20:00:07] 2025-11-25 00:59:35,873 | INFO     | sufficient remaining disk space (50145001472 B)
[2025-11-24 20:00:07] 2025-11-25 00:59:35,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 20:00:07] 2025-11-25 00:59:35,873 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 20:00:07] 2025-11-25 00:59:35,874 | INFO     | update_server=False
[2025-11-24 20:00:07] 2025-11-25 00:59:35,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 20:00:07] 2025-11-25 00:59:35,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:00:07] 2025-11-25 00:59:35,874 | INFO     | aborting loop
[2025-11-24 20:00:07] 2025-11-25 00:59:35,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 20:00:07] 2025-11-25 00:59:35,962 | INFO     | all job control threads have been joined
[2025-11-24 20:00:07] 2025-11-25 00:59:36,264 | INFO     | all payload control threads have been joined
[2025-11-24 20:00:07] 2025-11-25 00:59:36,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 20:00:07] 2025-11-25 00:59:36,878 | INFO     | [job] retrieve thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:36,879 | INFO     | [job] job monitor thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:36,935 | INFO     | [payload] validate_post thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:36,967 | INFO     | [job] control thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:36,969 | INFO     | all data control threads have been joined
[2025-11-24 20:00:07] 2025-11-25 00:59:37,028 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:37,210 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:37,270 | INFO     | [payload] control thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:37,319 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:37,834 | INFO     | [data] copytool_in thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:37,918 | INFO     | [job] validate thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:37,976 | INFO     | [data] control thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:38,114 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:38,394 | INFO     | [payload] failed_post thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:38,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:00:07] 2025-11-25 00:59:38,480 | INFO     | [data] copytool_out thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:39,484 | INFO     | [job] queue monitor thread has finished
[2025-11-24 20:00:07] 2025-11-25 00:59:39,888 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 20:00:07] 2025-11-25 01:00:00,221 | INFO     | [monitor] cgroup control has ended
[2025-11-24 20:00:07] 2025-11-25 01:00:01,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139964226455360)>', '<ExcThread(monitor, started 139963521824512)>']
[2025-11-24 20:00:07] 2025-11-25 01:00:06,026 | INFO     | PID=2607599 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 20:00:07] 2025-11-25 01:00:06,026 | INFO     | .. there are 7 such processes running
[2025-11-24 20:00:07] 2025-11-25 01:00:06,026 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 20:00:07] 2025-11-25 01:00:06,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 20:00:07] 2025-11-25 01:00:06,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 20:00:07] 2025-11-25 01:00:06,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 20:00:07] 2025-11-25 01:00:06,027 | INFO     | [monitor] control thread has ended
[2025-11-24 20:00:07] 2025-11-25 01:00:06,910 | INFO     | all workflow threads have been joined
[2025-11-24 20:00:07] 2025-11-25 01:00:06,911 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 20:00:07] 2025-11-25 01:00:06,911 | INFO     | traces error code: 0
[2025-11-24 20:00:07] 2025-11-25 01:00:06,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 20:00:07] 2025-11-25 01:00:07,448 [wrapper] ==== pilot stdout END ====
[2025-11-24 20:00:07] 2025-11-25 01:00:07,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 20:00:07] 2025-11-25 01:00:07,455 [wrapper] pilotpid: 2607599
[2025-11-24 20:00:07] 2025-11-25 01:00:07,459 [wrapper] Pilot exit status: 0
[2025-11-24 20:00:07] 2025-11-25 01:00:07,518 [wrapper] pandaids: 6894245561 6894245561 6894245561
[2025-11-24 20:00:07] 2025-11-25 01:00:07,614 [wrapper] cleanup supervisor_pilot 1998158 2607600
[2025-11-24 20:00:07] 2025-11-25 01:00:07,625 [wrapper] Test setup, not cleaning
[2025-11-24 20:00:07] 2025-11-25 01:00:07,631 [wrapper] apfmon messages muted
[2025-11-24 20:00:07] 2025-11-25 01:00:07,635 [wrapper] ==== wrapper stdout END ====
[2025-11-24 20:00:07] 2025-11-25 01:00:07,642 [wrapper] ==== wrapper stderr END ====
[2025-11-24 20:00:07]  *** Error codes and diagnostics ***
[2025-11-24 20:00:07]     "exeErrorCode": 0,
[2025-11-24 20:00:07]     "exeErrorDiag": "",
[2025-11-24 20:00:07]     "pilotErrorCode": 0,
[2025-11-24 20:00:07]     "pilotErrorDiag": "",
[2025-11-24 20:00:07]  *** Listing of results directory ***
[2025-11-24 20:00:07] total 1731292
[2025-11-24 20:00:07] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 20:08 pilot3.tar.gz
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 20:11 queuedata.json
[2025-11-24 20:00:07] -rwx------. 1 boincer umatlas     36292 Nov 20 20:13 runpilot2-wrapper.sh
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas       100 Nov 21 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 20:00:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 08:21 run_atlas
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas       105 Nov 21 08:21 job.xml
[2025-11-24 20:00:07] -rw-r--r--. 3 boincer umatlas 409287239 Nov 21 08:21 EVNT.47493127._002075.pool.root.1
[2025-11-24 20:00:07] -rw-r--r--. 3 boincer umatlas 409287239 Nov 21 08:21 ATLAS.root_0
[2025-11-24 20:00:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:21 start_atlas.sh
[2025-11-24 20:00:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 08:21 shared
[2025-11-24 20:00:07] -rw-r--r--. 2 boincer umatlas    590104 Nov 21 08:21 input.tar.gz
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas         0 Nov 21 08:21 boinc_lockfile
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:29 pandaJob.out
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas        57 Nov 23 00:29 setup.sh.local
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas    989784 Nov 23 00:29 agis_schedconf.cvmfs.json
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas       534 Nov 24 19:45 boinc_task_state.xml
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas      6662 Nov 24 19:57 init_data.xml
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas 906548932 Nov 24 19:58 HITS.47533967._000467.pool.root.1
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas      1083 Nov 24 19:59 memory_monitor_summary.json
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas        96 Nov 24 19:59 pilot_heartbeat.json
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:59 agis_ddmendpoints.agis.ALL.json
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas   3187014 Nov 24 19:59 log.47533967._000467.job.log.tgz.1
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas      8648 Nov 24 19:59 heartbeat.json
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 20:00 boinc_mmap_file
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas        30 Nov 24 20:00 wrapper_checkpoint.txt
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas      4823 Nov 24 20:00 pilotlog.txt
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas  18709688 Nov 24 20:00 log.47533967._000467.job.log.1
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas       353 Nov 24 20:00 output.list
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas       620 Nov 24 20:00 runtime_log
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas  21913600 Nov 24 20:00 result.tar.gz
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas      9429 Nov 24 20:00 runtime_log.err
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas       918 Nov 24 20:00 ey4LDmYtUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfmIKDmDYPGGm.diag
[2025-11-24 20:00:07] -rw-r--r--. 1 boincer umatlas     25805 Nov 24 20:00 stderr.txt
[2025-11-24 20:00:07] HITS file was successfully produced:
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas 906548932 Nov 24 19:58 shared/HITS.pool.root.1
[2025-11-24 20:00:07]  *** Contents of shared directory: ***
[2025-11-24 20:00:07] total 1307004
[2025-11-24 20:00:07] -rw-r--r--. 3 boincer umatlas 409287239 Nov 21 08:21 ATLAS.root_0
[2025-11-24 20:00:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:21 start_atlas.sh
[2025-11-24 20:00:07] -rw-r--r--. 2 boincer umatlas    590104 Nov 21 08:21 input.tar.gz
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas 906548932 Nov 24 19:58 HITS.pool.root.1
[2025-11-24 20:00:07] -rw-------. 1 boincer umatlas  21913600 Nov 24 20:00 result.tar.gz
20:00:09 (2593569): run_atlas exited; CPU time 311984.648736
20:00:09 (2593569): called boinc_finish(0)

</stderr_txt>
]]>

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