Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:46:37 (1479640): wrapper (7.7.26015): starting
08:46:37 (1479640): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 08:46:37] Arguments: --nthreads 8
[2025-11-21 08:46:37] Threads: 8
[2025-11-21 08:46:37] Checking for CVMFS
[2025-11-21 08:46:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 08:46:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 08:46:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 08:46:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 08:46:37] 2.13.2.0 10847 28717 200820 153129 2 328 38582047 40960000 6089 16776704 0 23540749 99.717 15650748 38434 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 08:46:37] CVMFS is ok
[2025-11-21 08:46:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 08:46:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 08:46:37] Further information can be found at the LHC@home message board.
[2025-11-21 08:46:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 08:46:37] Checking for apptainer binary...
[2025-11-21 08:46:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 08:46:37] Running /usr/bin/apptainer --version
[2025-11-21 08:46:37] apptainer version 1.4.4-1.el9
[2025-11-21 08:46:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 08:46:38] c-210-35-4.aglt2.org
[2025-11-21 08:46:38] apptainer works
[2025-11-21 08:46:38] Set ATHENA_PROC_NUMBER=8
[2025-11-21 08:46:38] Set ATHENA_CORE_NUMBER=8
[2025-11-21 08:46:38] Starting ATLAS job with PandaID=6894242379
[2025-11-21 08:46:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:20:06 (1479640): BOINC client no longer exists - exiting
05:20:06 (1479640): timer handler: client dead, exiting
05:32:01 (1314135): wrapper (7.7.26015): starting
05:32:01 (1314135): wrapper: running run_atlas (--nthreads 10)
[2025-11-23 05:32:01] Arguments: --nthreads 10
[2025-11-23 05:32:01] Threads: 10
[2025-11-23 05:32:01] This job has been restarted, cleaning up previous attempt
[2025-11-23 05:32:02] Checking for CVMFS
[2025-11-23 05:32:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 05:32:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 05:32:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 05:32:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 05:32:03] 2.13.2.0 10847 31402 261040 153205 0 89 29248216 40960001 9907 16776704 0 29082464 99.705 21667545 40667 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 05:32:03] CVMFS is ok
[2025-11-23 05:32:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 05:32:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 05:32:03] Further information can be found at the LHC@home message board.
[2025-11-23 05:32:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 05:32:03] Checking for apptainer binary...
[2025-11-23 05:32:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 05:32:03] Running /usr/bin/apptainer --version
[2025-11-23 05:32:03] apptainer version 1.4.4-1.el9
[2025-11-23 05:32:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 05:32:04] c-210-35-4.aglt2.org
[2025-11-23 05:32:04] apptainer works
[2025-11-23 05:32:04] Set ATHENA_PROC_NUMBER=10
[2025-11-23 05:32:04] Set ATHENA_CORE_NUMBER=10
[2025-11-23 05:32:04] Starting ATLAS job with PandaID=6894242379
[2025-11-23 05:32:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:02 (1314135):00:31:09 (2936159): wrapper (7.7.26015): starting
00:31:09 (2936159): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:31:09] Arguments: --nthreads 9
[2025-11-24 00:31:09] Threads: 9
[2025-11-24 00:31:09] This job has been restarted, cleaning up previous attempt
[2025-11-24 00:31:09] Checking for CVMFS
[2025-11-24 00:31:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:31:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:31:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:31:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:31:11] 2.13.2.0 10847 32541 260776 153235 3 87 40648639 40960001 11108 16776704 0 31368083 99.706 22642994 40125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:31:11] CVMFS is ok
[2025-11-24 00:31:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:31:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:31:11] Further information can be found at the LHC@home message board.
[2025-11-24 00:31:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:31:11] Checking for apptainer binary...
[2025-11-24 00:31:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:31:11] Running /usr/bin/apptainer --version
[2025-11-24 00:31:11] apptainer version 1.4.4-1.el9
[2025-11-24 00:31:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:31:11] c-210-35-4.aglt2.org
[2025-11-24 00:31:11] apptainer works
[2025-11-24 00:31:11] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:31:11] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:31:11] Starting ATLAS job with PandaID=6894242379
[2025-11-24 00:31:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:01:21]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:01:21] 2025-11-26 04:00:41,724 | INFO     | intersect: -6007428995.324881
[2025-11-25 23:01:21] 2025-11-26 04:00:41,770 | INFO     | chi2: 10.375594346249466
[2025-11-25 23:01:21] 2025-11-26 04:00:41,823 | INFO     | sum of square deviations: 6350032696694.425
[2025-11-25 23:01:21] 2025-11-26 04:00:42,872 | INFO     | sum of deviations: 22712818164393.656
[2025-11-25 23:01:21] 2025-11-26 04:00:42,872 | INFO     | mean x: 1764045824.2028508
[2025-11-25 23:01:21] 2025-11-26 04:00:42,872 | INFO     | mean y: 3056565.885233918
[2025-11-25 23:01:21] 2025-11-26 04:00:42,872 | INFO     | intersect: -6306588431.633329
[2025-11-25 23:01:21] 2025-11-26 04:00:42,880 | INFO     | chi2: 7.293812013119394
[2025-11-25 23:01:21] 2025-11-26 04:00:42,880 | INFO     | current chi2=7.293812013119394 (change=29.70222456937191 %)
[2025-11-25 23:01:21] 2025-11-26 04:00:42,887 | INFO     | sum of square deviations: 6315287209052.053
[2025-11-25 23:01:21] 2025-11-26 04:00:42,931 | INFO     | monitor loop #10309: job 0:6894242379 is in state 'finished'
[2025-11-25 23:01:21] 2025-11-26 04:00:42,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:01:21] 2025-11-26 04:00:43,614 | INFO     | sum of deviations: 23520539464310.355
[2025-11-25 23:01:21] 2025-11-26 04:00:43,615 | INFO     | mean x: 1764045671.7220798
[2025-11-25 23:01:21] 2025-11-26 04:00:43,615 | INFO     | mean y: 3060109.7949469057
[2025-11-25 23:01:21] 2025-11-26 04:00:43,615 | INFO     | intersect: -6566919127.113431
[2025-11-25 23:01:21] 2025-11-26 04:00:43,618 | INFO     | chi2: 4.91942805951003
[2025-11-25 23:01:21] 2025-11-26 04:00:43,618 | INFO     | current chi2=4.91942805951003 (change=32.55340210768464 %)
[2025-11-25 23:01:21] 2025-11-26 04:00:43,621 | INFO     | sum of square deviations: 6280667747982.064
[2025-11-25 23:01:21] 2025-11-26 04:00:43,658 | INFO     | time since job start (167340s) is within the limit (172800.0s)
[2025-11-25 23:01:21] 2025-11-26 04:00:44,457 | INFO     | sum of deviations: 23836912776061.055
[2025-11-25 23:01:21] 2025-11-26 04:00:44,457 | INFO     | mean x: 1764045519.2391782
[2025-11-25 23:01:21] 2025-11-26 04:00:44,458 | INFO     | mean y: 3061502.7743947175
[2025-11-25 23:01:21] 2025-11-26 04:00:44,458 | INFO     | intersect: -6691990816.879961
[2025-11-25 23:01:21] 2025-11-26 04:00:44,523 | INFO     | chi2: 4.375283791279771
[2025-11-25 23:01:21] 2025-11-26 04:00:44,523 | INFO     | current chi2=4.375283791279771 (change=11.061128685037726 %)
[2025-11-25 23:01:21] 2025-11-26 04:00:44,523 | INFO     | right removable region: 2725
[2025-11-25 23:01:21] 2025-11-26 04:00:44,547 | INFO     | sum of square deviations: 6350014834064.42
[2025-11-25 23:01:21] 2025-11-26 04:00:45,315 | INFO     | sum of deviations: 20750049616517.957
[2025-11-25 23:01:21] 2025-11-26 04:00:45,315 | INFO     | mean x: 1764046129.2028508
[2025-11-25 23:01:21] 2025-11-26 04:00:45,315 | INFO     | mean y: 3056768.084795322
[2025-11-25 23:01:21] 2025-11-26 04:00:45,315 | INFO     | intersect: -5761346255.105727
[2025-11-25 23:01:21] 2025-11-26 04:00:45,318 | INFO     | chi2: 7.339924163112087
[2025-11-25 23:01:21] 2025-11-26 04:00:45,318 | INFO     | current chi2=7.339924163112087 (change=29.257795571341916 %)
[2025-11-25 23:01:21] 2025-11-26 04:00:45,321 | INFO     | sum of square deviations: 6315254153638.213
[2025-11-25 23:01:21] 2025-11-26 04:00:45,524 | INFO     | monitor loop #10310: job 0:6894242379 is in state 'finished'
[2025-11-25 23:01:21] 2025-11-26 04:00:45,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:01:21] 2025-11-26 04:00:45,573 | INFO     | sum of deviations: 20450846438550.395
[2025-11-25 23:01:21] 2025-11-26 04:00:45,575 | INFO     | mean x: 1764046281.7169535
[2025-11-25 23:01:21] 2025-11-26 04:00:45,575 | INFO     | mean y: 3058080.8128890516
[2025-11-25 23:01:21] 2025-11-26 04:00:45,575 | INFO     | intersect: -5709497382.549695
[2025-11-25 23:01:21] 2025-11-26 04:00:45,578 | INFO     | chi2: 7.220537055679515
[2025-11-25 23:01:21] 2025-11-26 04:00:45,578 | INFO     | current chi2=7.220537055679515 (change=1.62654415467356 %)
[2025-11-25 23:01:21] 2025-11-26 04:00:45,587 | INFO     | left removable region: 20
[2025-11-25 23:01:21] 2025-11-26 04:00:45,608 | INFO     | sum of square deviations: 6136591617807.801
[2025-11-25 23:01:21] 2025-11-26 04:00:45,767 | INFO     | time since job start (167342s) is within the limit (172800.0s)
[2025-11-25 23:01:21] 2025-11-26 04:00:46,159 | INFO     | sum of deviations: 22025497235497.34
[2025-11-25 23:01:21] 2025-11-26 04:00:46,159 | INFO     | mean x: 1764046098.7981515
[2025-11-25 23:01:21] 2025-11-26 04:00:46,159 | INFO     | mean y: 3069495.1800369686
[2025-11-25 23:01:21] 2025-11-26 04:00:46,159 | INFO     | intersect: -6328457008.819022
[2025-11-25 23:01:21] 2025-11-26 04:00:46,162 | INFO     | chi2: 1.074674249732661
[2025-11-25 23:01:21] 2025-11-26 04:00:46,162 | INFO     | current memory leak: 3.59 B/s (using 2705 data points, chi2=1.07)
[2025-11-25 23:01:21] 2025-11-26 04:00:46,164 | INFO     | could have reported an average CPU frequency of 2789 MHz (94 samples)
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | ..............................
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | . Timing measurements:
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | . get job = 0 s
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | . initial setup = 3 s
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | . payload setup = 22 s
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | . stage-in = 0 s
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | . payload execution = 167230 s
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | . stage-out = 11 s
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | . log creation = 3 s
[2025-11-25 23:01:21] 2025-11-26 04:00:46,165 | INFO     | ..............................
[2025-11-25 23:01:21] 2025-11-26 04:00:46,296 | INFO     | 
[2025-11-25 23:01:21] 2025-11-26 04:00:46,296 | INFO     | job summary report
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | --------------------------------------------------
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | PanDA job id: 6894242379
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | task id: 47533967
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | errors: (none)
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | pilot state: finished 
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | transexitcode: 0
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | exeerrorcode: 0
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | exeerrordiag: 
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | exitcode: 0
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | exitmsg: OK
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | cpuconsumptiontime: 259517 s
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | nevents: 1000
[2025-11-25 23:01:21] 2025-11-26 04:00:46,297 | INFO     | neventsw: 0
[2025-11-25 23:01:21] 2025-11-26 04:00:46,298 | INFO     | pid: 2987442
[2025-11-25 23:01:21] 2025-11-26 04:00:46,298 | INFO     | pgrp: 2987442
[2025-11-25 23:01:21] 2025-11-26 04:00:46,298 | INFO     | corecount: 9
[2025-11-25 23:01:21] 2025-11-26 04:00:46,298 | INFO     | event service: False
[2025-11-25 23:01:21] 2025-11-26 04:00:46,298 | INFO     | sizes: {0: 2298634, 1: 2298833, 12: 2298833, 17: 2299123, 23: 2299151, 167253: 2403697, 167265: 2413487, 167267: 2413543, 167302: 2413789}
[2025-11-25 23:01:21] 2025-11-26 04:00:46,298 | INFO     | --------------------------------------------------
[2025-11-25 23:01:21] 2025-11-26 04:00:46,298 | INFO     | 
[2025-11-25 23:01:21] 2025-11-26 04:00:46,302 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-25 23:01:21] 2025-11-26 04:00:46,405 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,405 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,405 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,405 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:01:21] 2025-11-26 04:00:46,406 | INFO     | job 6894242379 has completed (purged errors)
[2025-11-25 23:01:21] 2025-11-26 04:00:46,407 | INFO     | overall cleanup function is called
[2025-11-25 23:01:21] 2025-11-26 04:00:47,436 | INFO     | --- collectZombieJob: --- 10, [2987442]
[2025-11-25 23:01:21] 2025-11-26 04:00:47,436 | INFO     | zombie collector waiting for pid 2987442
[2025-11-25 23:01:21] 2025-11-26 04:00:47,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:01:21] 2025-11-26 04:00:47,437 | INFO     | collected zombie processes
[2025-11-25 23:01:21] 2025-11-26 04:00:47,437 | INFO     | will attempt to kill all subprocesses of pid=2987442
[2025-11-25 23:01:21] 2025-11-26 04:00:47,979 | INFO     | process IDs to be killed: [2987442] (in reverse order)
[2025-11-25 23:01:21] 2025-11-26 04:00:48,154 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:01:21] 2025-11-26 04:00:48,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:01:21] 2025-11-26 04:00:48,169 | INFO     | did not find any defunct processes belonging to 2987442
[2025-11-25 23:01:21] 2025-11-26 04:00:48,186 | INFO     | did not find any defunct processes belonging to 2987442
[2025-11-25 23:01:21] 2025-11-26 04:00:48,188 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:01:21] 2025-11-26 04:00:48,189 | INFO     | ready for new job
[2025-11-25 23:01:21] 2025-11-26 04:00:48,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:01:21] 2025-11-26 04:00:48,208 | INFO     | ***************************************
[2025-11-25 23:01:21] 2025-11-26 04:00:48,208 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:01:21] 2025-11-26 04:00:48,208 | INFO     | ***************************************
[2025-11-25 23:01:21] 2025-11-26 04:00:48,208 | INFO     | 
[2025-11-25 23:01:21] 2025-11-26 04:00:48,215 | INFO     | architecture information:
[2025-11-25 23:01:21] 2025-11-26 04:00:48,220 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:01:21] 2025-11-26 04:00:48,254 | INFO     | cat /etc/os-release:
[2025-11-25 23:01:21] NAME="CentOS Linux"
[2025-11-25 23:01:21] VERSION="7 (Core)"
[2025-11-25 23:01:21] ID="centos"
[2025-11-25 23:01:21] ID_LIKE="rhel fedora"
[2025-11-25 23:01:21] VERSION_ID="7"
[2025-11-25 23:01:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:01:21] ANSI_COLOR="0;31"
[2025-11-25 23:01:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:01:21] HOME_URL="https://www.centos.org/"
[2025-11-25 23:01:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:01:21] 
[2025-11-25 23:01:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:01:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:01:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:01:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:01:21] 
[2025-11-25 23:01:21] 2025-11-26 04:00:48,255 | INFO     | ***************************************
[2025-11-25 23:01:21] 2025-11-26 04:00:48,758 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-25 23:01:21] 2025-11-26 04:00:48,803 | INFO     | sufficient remaining disk space (71147978752 B)
[2025-11-25 23:01:21] 2025-11-26 04:00:48,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:01:21] 2025-11-26 04:00:48,807 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:01:21] 2025-11-26 04:00:48,808 | INFO     | update_server=False
[2025-11-25 23:01:21] 2025-11-26 04:00:48,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:01:21] 2025-11-26 04:00:49,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:01:21] 2025-11-26 04:00:49,070 | INFO     | aborting loop
[2025-11-25 23:01:21] 2025-11-26 04:00:49,101 | INFO     | all payload control threads have been joined
[2025-11-25 23:01:21] 2025-11-26 04:00:49,336 | INFO     | all data control threads have been joined
[2025-11-25 23:01:21] 2025-11-26 04:00:49,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:01:21] 2025-11-26 04:00:49,730 | INFO     | all job control threads have been joined
[2025-11-25 23:01:21] 2025-11-26 04:00:49,813 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:49,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:01:21] 2025-11-26 04:00:50,075 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,107 | INFO     | [payload] control thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,122 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,320 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,342 | INFO     | [data] control thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,543 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,678 | INFO     | [job] validate thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,736 | INFO     | [job] control thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,758 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,780 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:50,974 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:51,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:01:21] 2025-11-26 04:00:51,565 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:01:21] 2025-11-26 04:00:52,003 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:52,340 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:53,505 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:01:21] 2025-11-26 04:00:54,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562820011840)>', '<ExcThread(monitor, started 140562166429440)>']
[2025-11-25 23:01:21] 2025-11-26 04:00:59,304 | INFO     | all workflow threads have been joined
[2025-11-25 23:01:21] 2025-11-26 04:00:59,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:01:21] 2025-11-26 04:00:59,305 | INFO     | traces error code: 0
[2025-11-25 23:01:21] 2025-11-26 04:00:59,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:01:21] 2025-11-26 04:01:17,876 | INFO     | 167347s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-25 23:01:21] 2025-11-26 04:01:19,539 | INFO     | PID=2954554 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:01:21] 2025-11-26 04:01:19,539 | INFO     | .. there are 10 such processes running
[2025-11-25 23:01:21] 2025-11-26 04:01:19,540 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:01:21] 2025-11-26 04:01:19,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:01:21] 2025-11-26 04:01:19,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:01:21] 2025-11-26 04:01:19,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:01:21] 2025-11-26 04:01:19,540 | INFO     | [monitor] control thread has ended
[2025-11-25 23:01:21] 2025-11-26 04:01:20,062 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:01:21] 2025-11-26 04:01:20,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:01:21] 2025-11-26 04:01:20,131 [wrapper] pilotpid: 2954554
[2025-11-25 23:01:21] 2025-11-26 04:01:20,148 [wrapper] Pilot exit status: 0
[2025-11-25 23:01:21] 2025-11-26 04:01:20,329 [wrapper] pandaids: 6894242379 6894242379 6894242379
[2025-11-25 23:01:21] 2025-11-26 04:01:20,415 [wrapper] cleanup supervisor_pilot 3037458 2954556
[2025-11-25 23:01:21] 2025-11-26 04:01:20,451 [wrapper] Test setup, not cleaning
[2025-11-25 23:01:21] 2025-11-26 04:01:20,468 [wrapper] apfmon messages muted
[2025-11-25 23:01:21] 2025-11-26 04:01:20,493 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:01:21] 2025-11-26 04:01:20,520 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:01:21]  *** Error codes and diagnostics ***
[2025-11-25 23:01:21]     "exeErrorCode": 0,
[2025-11-25 23:01:21]     "exeErrorDiag": "",
[2025-11-25 23:01:21]     "pilotErrorCode": 0,
[2025-11-25 23:01:21]     "pilotErrorDiag": "",
[2025-11-25 23:01:21]  *** Listing of results directory ***
[2025-11-25 23:01:21] total 1751864
[2025-11-25 23:01:21] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 19:06 pilot3.tar.gz
[2025-11-25 23:01:21] -rwx------. 1 boincer umatlas     36292 Nov 20 19:52 runpilot2-wrapper.sh
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 19:53 queuedata.json
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas       100 Nov 21 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:01:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 08:46 run_atlas
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas       105 Nov 21 08:46 job.xml
[2025-11-25 23:01:21] -rw-r--r--. 3 boincer umatlas 409105887 Nov 21 08:46 EVNT.47493127._002064.pool.root.1
[2025-11-25 23:01:21] -rw-r--r--. 3 boincer umatlas 409105887 Nov 21 08:46 ATLAS.root_0
[2025-11-25 23:01:21] -rw-r--r--. 2 boincer umatlas    590109 Nov 21 08:46 input.tar.gz
[2025-11-25 23:01:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:46 start_atlas.sh
[2025-11-25 23:01:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 08:46 shared
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas         0 Nov 21 08:46 boinc_lockfile
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:31 pandaJob.out
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas        57 Nov 24 00:31 setup.sh.local
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas    989786 Nov 24 00:31 agis_schedconf.cvmfs.json
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas       534 Nov 25 22:43 boinc_task_state.xml
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas 921855510 Nov 25 22:58 HITS.47533967._000359.pool.root.1
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas      1071 Nov 25 22:59 memory_monitor_summary.json
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas      6844 Nov 25 23:00 init_data.xml
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas   3523974 Nov 25 23:00 log.47533967._000359.job.log.tgz.1
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas        96 Nov 25 23:00 pilot_heartbeat.json
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas      8648 Nov 25 23:00 heartbeat.json
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas       940 Nov 25 23:01 pilotlog.txt
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:01 boinc_mmap_file
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas        30 Nov 25 23:01 wrapper_checkpoint.txt
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas  21430350 Nov 25 23:01 log.47533967._000359.job.log.1
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas       353 Nov 25 23:01 output.list
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:01 runtime_log
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas  24975360 Nov 25 23:01 result.tar.gz
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas      9439 Nov 25 23:01 runtime_log.err
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas       919 Nov 25 23:01 g2JNDmVZUg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyDHKDmAUTgzm.diag
[2025-11-25 23:01:21] -rw-r--r--. 1 boincer umatlas     25855 Nov 25 23:01 stderr.txt
[2025-11-25 23:01:21] HITS file was successfully produced:
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas 921855510 Nov 25 22:58 shared/HITS.pool.root.1
[2025-11-25 23:01:21]  *** Contents of shared directory: ***
[2025-11-25 23:01:21] total 1324768
[2025-11-25 23:01:21] -rw-r--r--. 3 boincer umatlas 409105887 Nov 21 08:46 ATLAS.root_0
[2025-11-25 23:01:21] -rw-r--r--. 2 boincer umatlas    590109 Nov 21 08:46 input.tar.gz
[2025-11-25 23:01:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:46 start_atlas.sh
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas 921855510 Nov 25 22:58 HITS.pool.root.1
[2025-11-25 23:01:21] -rw-------. 1 boincer umatlas  24975360 Nov 25 23:01 result.tar.gz
23:01:22 (2936159): run_atlas exited; CPU time 261852.375285
23:01:22 (2936159): called boinc_finish(0)

</stderr_txt>
]]>

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