Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:32:42 (653385): wrapper (7.7.26015): starting
06:32:42 (653385): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 06:32:42] Arguments: --nthreads 3
[2025-11-24 06:32:42] Threads: 3
[2025-11-24 06:32:42] Checking for CVMFS
[2025-11-24 06:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 06:32:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 06:32:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 06:32:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 06:32:43] 2.9.2.0 3803052 7929 69032 153235 0 81 34467226 36864000 0 130560 0 2847973 99.912 442016 7011 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 06:32:43] CVMFS is ok
[2025-11-24 06:32:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 06:32:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 06:32:43] Further information can be found at the LHC@home message board.
[2025-11-24 06:32:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 06:32:43] Checking for apptainer binary...
[2025-11-24 06:32:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 06:32:43] Running /usr/bin/apptainer --version
[2025-11-24 06:32:43] apptainer version 1.4.1-1.1
[2025-11-24 06:32:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 06:32:43] thA333
[2025-11-24 06:32:43] apptainer works
[2025-11-24 06:32:43] Set ATHENA_PROC_NUMBER=3
[2025-11-24 06:32:43] Set ATHENA_CORE_NUMBER=3
[2025-11-24 06:32:43] Starting ATLAS job with PandaID=6894245874
[2025-11-24 06:32:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 15:20:46]  *** The last 200 lines of the pilot log: ***
[2025-11-24 15:20:46] ID_LIKE="rhel fedora"
[2025-11-24 15:20:46] VERSION_ID="7"
[2025-11-24 15:20:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 15:20:46] ANSI_COLOR="0;31"
[2025-11-24 15:20:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 15:20:46] HOME_URL="https://www.centos.org/"
[2025-11-24 15:20:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 15:20:46] 
[2025-11-24 15:20:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 15:20:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 15:20:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 15:20:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 15:20:46] 
[2025-11-24 15:20:46] 2025-11-24 14:19:58,598 | INFO     | ***************************************
[2025-11-24 15:20:46] 2025-11-24 14:19:59,102 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 15:20:46] 2025-11-24 14:19:59,114 | INFO     | sufficient remaining disk space (222227857408 B)
[2025-11-24 15:20:46] 2025-11-24 14:19:59,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 15:20:46] 2025-11-24 14:19:59,115 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 15:20:46] 2025-11-24 14:19:59,115 | INFO     | update_server=False
[2025-11-24 15:20:46] 2025-11-24 14:19:59,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 15:20:46] 2025-11-24 14:19:59,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 15:20:46] 2025-11-24 14:19:59,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:20:46] 2025-11-24 14:19:59,115 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 15:20:46] 2025-11-24 14:19:59,215 | INFO     | all job control threads have been joined
[2025-11-24 15:20:46] 2025-11-24 14:19:59,572 | INFO     | all payload control threads have been joined
[2025-11-24 15:20:46] 2025-11-24 14:19:59,771 | INFO     | all data control threads have been joined
[2025-11-24 15:20:46] 2025-11-24 14:19:59,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:20:46] 2025-11-24 14:19:59,944 | INFO     | aborting loop
[2025-11-24 15:20:46] 2025-11-24 14:20:00,120 | INFO     | [job] retrieve thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:00,121 | INFO     | [job] queue monitor thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:00,221 | INFO     | [job] control thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:00,534 | INFO     | [payload] validate_post thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:00,577 | INFO     | [payload] control thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:00,777 | INFO     | [data] control thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:00,857 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:00,929 | INFO     | [data] copytool_in thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:00,949 | INFO     | [job] job monitor thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:01,004 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:01,121 | INFO     | [data] copytool_out thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:01,220 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:01,224 | INFO     | [job] validate thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:01,695 | INFO     | [payload] failed_post thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:03,122 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:09,876 | INFO     | job.realtimelogging is not enabled
[2025-11-24 15:20:46] 2025-11-24 14:20:10,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 15:20:46] 2025-11-24 14:20:29,263 | INFO     | PID=657110 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 15:20:46] 2025-11-24 14:20:29,263 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 15:20:46] 2025-11-24 14:20:29,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 15:20:46] 2025-11-24 14:20:29,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 15:20:46] 2025-11-24 14:20:40,708 | INFO     | [monitor] cgroup control has ended
[2025-11-24 15:20:46] 2025-11-24 14:20:41,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695172007744)>', '<ExcThread(monitor, started 140694362498816)>']
[2025-11-24 15:20:46] 2025-11-24 14:20:42,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 15:20:46] 2025-11-24 14:20:42,334 | INFO     | [monitor] control thread has ended
[2025-11-24 15:20:46] 2025-11-24 14:20:46,531 | INFO     | all workflow threads have been joined
[2025-11-24 15:20:46] 2025-11-24 14:20:46,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 15:20:46] 2025-11-24 14:20:46,532 | INFO     | traces error code: 0
[2025-11-24 15:20:46] 2025-11-24 14:20:46,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 15:20:46] 2025-11-24 14:20:46,578 [wrapper] ==== pilot stdout END ====
[2025-11-24 15:20:46] 2025-11-24 14:20:46,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 15:20:46] 2025-11-24 14:20:46,584 [wrapper] pilotpid: 657110
[2025-11-24 15:20:46] 2025-11-24 14:20:46,587 [wrapper] Pilot exit status: 0
[2025-11-24 15:20:46] 2025-11-24 14:20:46,594 [wrapper] pandaids: 6894245874
[2025-11-24 15:20:46] 2025-11-24 14:20:46,610 [wrapper] cleanup supervisor_pilot  721185 657111
[2025-11-24 15:20:46] 2025-11-24 14:20:46,613 [wrapper] Test setup, not cleaning
[2025-11-24 15:20:46] 2025-11-24 14:20:46,615 [wrapper] apfmon messages muted
[2025-11-24 15:20:46] 2025-11-24 14:20:46,618 [wrapper] ==== wrapper stdout END ====
[2025-11-24 15:20:46] 2025-11-24 14:20:46,620 [wrapper] ==== wrapper stderr END ====
[2025-11-24 15:20:46]  *** Error codes and diagnostics ***
[2025-11-24 15:20:46]     "exeErrorCode": 0,
[2025-11-24 15:20:46]     "exeErrorDiag": "",
[2025-11-24 15:20:46]     "pilotErrorCode": 0,
[2025-11-24 15:20:46]     "pilotErrorDiag": "",
[2025-11-24 15:20:46]  *** Listing of results directory ***
[2025-11-24 15:20:46] total 1312892
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc    576529 Nov 21 02:08 pilot3.tar.gz
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc      5112 Nov 21 02:19 queuedata.json
[2025-11-24 15:20:46] -rwx------ 1 boinc boinc     36292 Nov 21 02:20 runpilot2-wrapper.sh
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc       100 Nov 24 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 15:20:46] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 06:32 run_atlas
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc       105 Nov 24 06:32 job.xml
[2025-11-24 15:20:46] -rw-r--r-- 2 boinc boinc 411394296 Nov 24 06:32 EVNT.47493127._002085.pool.root.1
[2025-11-24 15:20:46] drwxrwx--x 2 boinc boinc      4096 Nov 24 06:32 shared
[2025-11-24 15:20:46] -rw-r--r-- 2 boinc boinc    590105 Nov 24 06:32 input.tar.gz
[2025-11-24 15:20:46] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:32 start_atlas.sh
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc         0 Nov 24 06:32 boinc_setup_complete
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc      6197 Nov 24 06:32 init_data.xml
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc         0 Nov 24 06:32 boinc_lockfile
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc      2785 Nov 24 06:32 pandaJob.out
[2025-11-24 15:20:46] -rw------- 1 boinc boinc    989786 Nov 24 06:32 agis_schedconf.cvmfs.json
[2025-11-24 15:20:46] drwx------ 5 boinc boinc      4096 Nov 24 06:32 pilot3
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc       531 Nov 24 15:15 boinc_task_state.xml
[2025-11-24 15:20:46] -rw------- 1 boinc boinc 917817044 Nov 24 15:19 HITS.47533967._000565.pool.root.1
[2025-11-24 15:20:46] -rw------- 1 boinc boinc        95 Nov 24 15:19 pilot_heartbeat.json
[2025-11-24 15:20:46] -rw------- 1 boinc boinc      1024 Nov 24 15:19 memory_monitor_summary.json
[2025-11-24 15:20:46] -rw------- 1 boinc boinc   1516227 Nov 24 15:19 agis_ddmendpoints.agis.ALL.json
[2025-11-24 15:20:46] -rw------- 1 boinc boinc   1202680 Nov 24 15:19 log.47533967._000565.job.log.tgz.1
[2025-11-24 15:20:46] -rw------- 1 boinc boinc      8579 Nov 24 15:19 heartbeat.json
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc      8192 Nov 24 15:20 boinc_mmap_file
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc        28 Nov 24 15:20 wrapper_checkpoint.txt
[2025-11-24 15:20:46] -rw------- 1 boinc boinc      4823 Nov 24 15:20 pilotlog.txt
[2025-11-24 15:20:46] -rw------- 1 boinc boinc   4442234 Nov 24 15:20 log.47533967._000565.job.log.1
[2025-11-24 15:20:46] -rw------- 1 boinc boinc       353 Nov 24 15:20 output.list
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc       620 Nov 24 15:20 runtime_log
[2025-11-24 15:20:46] -rw------- 1 boinc boinc   5662720 Nov 24 15:20 result.tar.gz
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc      8898 Nov 24 15:20 runtime_log.err
[2025-11-24 15:20:46] -rw------- 1 boinc boinc       665 Nov 24 15:20 FAcNDm2zUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmznIKDmO444Vm.diag
[2025-11-24 15:20:46] -rw-r--r-- 1 boinc boinc      8680 Nov 24 15:20 stderr.txt
[2025-11-24 15:20:46] HITS file was successfully produced:
[2025-11-24 15:20:46] -rw------- 1 boinc boinc 917817044 Nov 24 15:19 shared/HITS.pool.root.1
[2025-11-24 15:20:46]  *** Contents of shared directory: ***
[2025-11-24 15:20:46] total 1304196
[2025-11-24 15:20:46] -rw-r--r-- 2 boinc boinc 411394296 Nov 24 06:32 ATLAS.root_0
[2025-11-24 15:20:46] -rw-r--r-- 2 boinc boinc    590105 Nov 24 06:32 input.tar.gz
[2025-11-24 15:20:46] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:32 start_atlas.sh
[2025-11-24 15:20:46] -rw------- 1 boinc boinc 917817044 Nov 24 15:19 HITS.pool.root.1
[2025-11-24 15:20:46] -rw------- 1 boinc boinc   5662720 Nov 24 15:20 result.tar.gz
15:20:47 (653385): run_atlas exited; CPU time 93311.094399
15:20:47 (653385): called boinc_finish(0)

</stderr_txt>
]]>

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