Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:58:00 (3777632): wrapper (7.7.26015): starting
05:58:00 (3777632): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 05:58:00] Arguments: --nthreads 12
[2025-11-21 05:58:00] Threads: 12
[2025-11-21 05:58:00] Checking for CVMFS
[2025-11-21 05:58:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 05:58:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 05:58:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 05:58:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 05:58:05] 2.11.5.0 394429 20957 247692 153129 2 295 30733014 45568000 20924 130560 0 190713079 99.771 129628369 22325 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-21 05:58:05] CVMFS is ok
[2025-11-21 05:58:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 05:58:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 05:58:05] Further information can be found at the LHC@home message board.
[2025-11-21 05:58:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 05:58:05] Checking for apptainer binary...
[2025-11-21 05:58:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 05:58:05] Running /usr/bin/apptainer --version
[2025-11-21 05:58:05] apptainer version 1.4.1-1.el9
[2025-11-21 05:58:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 05:58:07] wns0074.triumf.lcg
[2025-11-21 05:58:07] apptainer works
[2025-11-21 05:58:07] Set ATHENA_PROC_NUMBER=12
[2025-11-21 05:58:07] Set ATHENA_CORE_NUMBER=12
[2025-11-21 05:58:07] Starting ATLAS job with PandaID=6894268686
[2025-11-21 05:58:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 06:09:11]  *** The last 200 lines of the pilot log: ***
[2025-11-21 06:09:11] 2025-11-21 14:08:19,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 06:09:11] 2025-11-21 14:08:19,305 | WARNING  | wrong length of table data, x=[1763733698.0, 1763733759.0, 1763733820.0, 1763733881.0], y=[12885.0, 359867.0, 749734.0, 365416.0] (must be same and length>=4)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,306 | INFO     | could have reported an average CPU frequency of 1290 MHz (4 samples)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,306 | INFO     | ..............................
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . Timing measurements:
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . get job = 0 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . initial setup = 6 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . payload setup = 44 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . stage-in = 1 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . payload execution = 270 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . stage-out = 3 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . log creation = 0 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | ..............................
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 06:09:11] 2025-11-21 14:08:19,308 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894268686/pilotlog.txt
[2025-11-21 06:09:11] 2025-11-21 14:08:19,322 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 06:09:11] - Log from pilotlog.txt -
[2025-11-21 06:09:11] 2025-11-21 14:08:19,302 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894268686/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,303 | INFO     | extracted standard info from prmon json
[2025-11-21 06:09:11] 2025-11-21 14:08:19,304 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 06:09:11] 2025-11-21 14:08:19,304 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 06:09:11] 2025-11-21 14:08:19,304 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 06:09:11] 2025-11-21 14:08:19,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 06:09:11] 2025-11-21 14:08:19,305 | WARNING  | wrong length of table data, x=[1763733698.0, 1763733759.0, 1763733820.0, 1763733881.0], y=[12885.0, 359867.0, 749734.0, 365416.0] (must be same and length>=4)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,306 | INFO     | could have reported an average CPU frequency of 1290 MHz (4 samples)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,306 | INFO     | ..............................
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . Timing measurements:
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . get job = 0 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . initial setup = 6 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . payload setup = 44 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . stage-in = 1 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . payload execution = 270 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . stage-out = 3 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . log creation = 0 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | ..............................
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 06:09:11] 2025-11-21 14:08:19,308 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894268686/pilotlog.txt
[2025-11-21 06:09:11] 2025-11-21 14:08:19,322 | WARNING  | 
[2025-11-21 06:09:11] [begin log extracts]
[2025-11-21 06:09:11] - Log from pilotlog.txt -
[2025-11-21 06:09:11] 2025-11-21 14:08:19,302 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894268686/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,303 | INFO     | extracted standard info from prmon json
[2025-11-21 06:09:11] 2025-11-21 14:08:19,304 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 06:09:11] 2025-11-21 14:08:19,304 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 06:09:11] 2025-11-21 14:08:19,304 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 06:09:11] 2025-11-21 14:08:19,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 06:09:11] 2025-11-21 14:08:19,305 | WARNING  | wrong length of table data, x=[1763733698.0, 1763733759.0, 1763733820.0, 1763733881.0], y=[12885.0, 359867.0, 749734.0, 365416.0] (must be same and length>=4)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,306 | INFO     | could have reported an average CPU frequency of 1290 MHz (4 samples)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,306 | INFO     | ..............................
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . Timing measurements:
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . get job = 0 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . initial setup = 6 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . payload setup = 44 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . stage-in = 1 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . payload execution = 270 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . stage-out = 3 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | . log creation = 0 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | ..............................
[2025-11-21 06:09:11] 2025-11-21 14:08:19,307 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 06:09:11] 2025-11-21 14:08:19,308 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894268686/pilotlog.txt
[2025-11-21 06:09:11] [end log extracts]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,323 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,324 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 06:09:11] 2025-11-21 14:08:19,446 | INFO     | 
[2025-11-21 06:09:11] 2025-11-21 14:08:19,446 | INFO     | job summary report
[2025-11-21 06:09:11] 2025-11-21 14:08:19,446 | INFO     | --------------------------------------------------
[2025-11-21 06:09:11] 2025-11-21 14:08:19,446 | INFO     | PanDA job id: 6894268686
[2025-11-21 06:09:11] 2025-11-21 14:08:19,447 | INFO     | task id: 47533967
[2025-11-21 06:09:11] 2025-11-21 14:08:19,447 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 06:05:34,475 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 06:09:11] 2025-11-21 14:08:19,447 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-21 06:09:11] 2025-11-21 14:08:19,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 06:09:11] 2025-11-21 14:08:19,447 | INFO     | pilot state: failed 
[2025-11-21 06:09:11] 2025-11-21 14:08:19,447 | INFO     | transexitcode: 65
[2025-11-21 06:09:11] 2025-11-21 14:08:19,447 | INFO     | exeerrorcode: 65
[2025-11-21 06:09:11] 2025-11-21 14:08:19,447 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-21 06:09:11] 2025-11-21 14:08:19,448 | INFO     | exitcode: 65
[2025-11-21 06:09:11] 2025-11-21 14:08:19,448 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-21 06:09:11] 2025-11-21 14:08:19,448 | INFO     | cpuconsumptiontime: 78 s
[2025-11-21 06:09:11] 2025-11-21 14:08:19,448 | INFO     | nevents: 0
[2025-11-21 06:09:11] 2025-11-21 14:08:19,448 | INFO     | neventsw: 0
[2025-11-21 06:09:11] 2025-11-21 14:08:19,448 | INFO     | pid: 3789273
[2025-11-21 06:09:11] 2025-11-21 14:08:19,448 | INFO     | pgrp: 3789273
[2025-11-21 06:09:11] 2025-11-21 14:08:19,448 | INFO     | corecount: 12
[2025-11-21 06:09:11] 2025-11-21 14:08:19,448 | INFO     | event service: False
[2025-11-21 06:09:11] 2025-11-21 14:08:19,449 | INFO     | sizes: {0: 2297973, 1: 2298655, 2: 2298683, 3: 2298854, 4: 2298882, 15: 2298910, 26: 2299066, 38: 2289538, 39: 2299384, 49: 2299412, 320: 2324914, 321: 2325198, 32
[2025-11-21 06:09:11] 2025-11-21 14:08:19,449 | INFO     | --------------------------------------------------
[2025-11-21 06:09:11] 2025-11-21 14:08:19,449 | INFO     | 
[2025-11-21 06:09:11] 2025-11-21 14:08:19,449 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 06:09:11] 2025-11-21 14:08:19,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,562 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 06:09:11] 2025-11-21 14:08:19,563 | INFO     | job 6894268686 has completed (purged errors)
[2025-11-21 06:09:11] 2025-11-21 14:08:19,563 | INFO     | overall cleanup function is called
[2025-11-21 06:09:11] 2025-11-21 14:08:20,601 | INFO     | --- collectZombieJob: --- 10, [3789273]
[2025-11-21 06:09:11] 2025-11-21 14:08:20,602 | INFO     | zombie collector waiting for pid 3789273
[2025-11-21 06:09:11] 2025-11-21 14:08:20,602 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 06:09:11] 2025-11-21 14:08:20,602 | INFO     | collected zombie processes
[2025-11-21 06:09:11] 2025-11-21 14:08:20,602 | INFO     | will attempt to kill all subprocesses of pid=3789273
[2025-11-21 06:09:11] 2025-11-21 14:08:21,887 | INFO     | process IDs to be killed: [3789273] (in reverse order)
[2025-11-21 06:09:11] 2025-11-21 14:08:22,293 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 06:09:11] 2025-11-21 14:08:22,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 06:09:11] 2025-11-21 14:08:22,329 | INFO     | did not find any defunct processes belonging to 3789273
[2025-11-21 06:09:11] 2025-11-21 14:08:22,364 | INFO     | did not find any defunct processes belonging to 3789273
[2025-11-21 06:09:11] 2025-11-21 14:08:22,365 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 06:09:11] 2025-11-21 14:08:22,366 | INFO     | ready for new job
[2025-11-21 06:09:11] 2025-11-21 14:08:22,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 06:09:11] 2025-11-21 14:08:22,377 | INFO     | ***************************************
[2025-11-21 06:09:11] 2025-11-21 14:08:22,377 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 06:09:11] 2025-11-21 14:08:22,377 | INFO     | ***************************************
[2025-11-21 06:09:11] 2025-11-21 14:08:22,378 | INFO     | 
[2025-11-21 06:09:11] 2025-11-21 14:08:22,393 | INFO     | architecture information:
[2025-11-21 06:09:11] 2025-11-21 14:08:22,402 | INFO     | executing command: cat /etc/os-release
[2025-11-21 06:09:11] 2025-11-21 14:08:22,466 | INFO     | cat /etc/os-release:
[2025-11-21 06:09:11] NAME="CentOS Linux"
[2025-11-21 06:09:11] VERSION="7 (Core)"
[2025-11-21 06:09:11] ID="centos"
[2025-11-21 06:09:11] ID_LIKE="rhel fedora"
[2025-11-21 06:09:11] VERSION_ID="7"
[2025-11-21 06:09:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 06:09:11] ANSI_COLOR="0;31"
[2025-11-21 06:09:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 06:09:11] HOME_URL="https://www.centos.org/"
[2025-11-21 06:09:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 06:09:11] 
[2025-11-21 06:09:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 06:09:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 06:09:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 06:09:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 06:09:11] 
[2025-11-21 06:09:11] 2025-11-21 14:08:22,466 | INFO     | ***************************************
[2025-11-21 06:09:11] 2025-11-21 14:08:22,970 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 06:09:11] 2025-11-21 14:08:23,062 | INFO     | sufficient remaining disk space (1854301798400 B)
[2025-11-21 06:09:11] 2025-11-21 14:08:23,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 06:09:11] 2025-11-21 14:08:23,063 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 06:09:11] 2025-11-21 14:08:23,063 | INFO     | update_server=False
[2025-11-21 06:09:11] 2025-11-21 14:08:23,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 06:09:11] 2025-11-21 14:08:23,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 06:09:11] 2025-11-21 14:08:23,521 | INFO     | all data control threads have been joined
[2025-11-21 06:09:11] 2025-11-21 14:08:23,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 06:09:11] 2025-11-21 14:08:23,612 | INFO     | aborting loop
[2025-11-21 06:09:11] 2025-11-21 14:08:23,658 | INFO     | all job control threads have been joined
[2025-11-21 06:09:11] 2025-11-21 14:08:23,791 | INFO     | all payload control threads have been joined
[2025-11-21 06:09:11] 2025-11-21 14:08:24,069 | INFO     | [job] retrieve thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:24,109 | INFO     | [payload] failed_post thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:24,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 06:09:11] 2025-11-21 14:08:24,528 | INFO     | [data] control thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:24,619 | INFO     | [job] job monitor thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:24,673 | INFO     | [job] control thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:24,679 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:24,679 | INFO     | [data] copytool_in thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:24,798 | INFO     | [payload] control thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:25,045 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:25,047 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:25,050 | INFO     | [job] validate thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:25,050 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:25,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 06:09:11] 2025-11-21 14:08:25,288 | INFO     | [data] copytool_out thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:25,469 | INFO     | [job] queue monitor thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:25,650 | INFO     | [payload] validate_post thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:29,123 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 06:09:11] 2025-11-21 14:08:52,386 | INFO     | PID=3781496 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 06:09:11] 2025-11-21 14:08:52,386 | INFO     | .. there are 35 such processes running
[2025-11-21 06:09:11] 2025-11-21 14:08:52,386 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 06:09:11] 2025-11-21 14:08:52,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 06:09:11] 2025-11-21 14:08:52,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 06:09:11] 2025-11-21 14:09:04,100 | INFO     | [monitor] cgroup control has ended
[2025-11-21 06:09:11] 2025-11-21 14:09:04,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682912343872)>', '<ExcThread(monitor, started 139682352436992)>']
[2025-11-21 06:09:11] 2025-11-21 14:09:04,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 06:09:11] 2025-11-21 14:09:04,469 | INFO     | [monitor] control thread has ended
[2025-11-21 06:09:11] 2025-11-21 14:09:09,449 | INFO     | all workflow threads have been joined
[2025-11-21 06:09:11] 2025-11-21 14:09:09,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 06:09:11] 2025-11-21 14:09:09,450 | INFO     | traces error code: 0
[2025-11-21 06:09:11] 2025-11-21 14:09:09,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 06:09:11] 2025-11-21 14:09:10,092 [wrapper] ==== pilot stdout END ====
[2025-11-21 06:09:11] 2025-11-21 14:09:10,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 06:09:11] 2025-11-21 14:09:10,151 [wrapper] pilotpid: 3781496
[2025-11-21 06:09:11] 2025-11-21 14:09:10,229 [wrapper] Pilot exit status: 0
[2025-11-21 06:09:11] 2025-11-21 14:09:10,336 [wrapper] pandaids: 6894268686
[2025-11-21 06:09:11] 2025-11-21 14:09:10,617 [wrapper] cleanup supervisor_pilot 3781502 3781497
[2025-11-21 06:09:11] 2025-11-21 14:09:10,639 [wrapper] Test setup, not cleaning
[2025-11-21 06:09:11] 2025-11-21 14:09:10,658 [wrapper] apfmon messages muted
[2025-11-21 06:09:11] 2025-11-21 14:09:10,679 [wrapper] ==== wrapper stdout END ====
[2025-11-21 06:09:11] 2025-11-21 14:09:10,720 [wrapper] ==== wrapper stderr END ====
[2025-11-21 06:09:11]  *** Error codes and diagnostics ***
[2025-11-21 06:09:11]     "exeErrorCode": 65,
[2025-11-21 06:09:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-21 06:09:11]     "pilotErrorCode": 1305,
[2025-11-21 06:09:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-21 06:09:11]  *** Listing of results directory ***
[2025-11-21 06:09:11] total 406040
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc    576529 Nov 20 22:04 pilot3.tar.gz
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc      5112 Nov 20 22:09 queuedata.json
[2025-11-21 06:09:11] -rwx------. 1 boinc boinc     36292 Nov 20 22:09 runpilot2-wrapper.sh
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc       100 Nov 21 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 06:09:11] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 05:57 run_atlas
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc       105 Nov 21 05:57 job.xml
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc      6594 Nov 21 05:58 init_data.xml
[2025-11-21 06:09:11] -rw-r--r--. 2 boinc boinc 411503818 Nov 21 05:58 EVNT.47493127._002277.pool.root.1
[2025-11-21 06:09:11] -rw-r--r--. 2 boinc boinc     15847 Nov 21 05:58 start_atlas.sh
[2025-11-21 06:09:11] drwxrwx--x. 2 boinc boinc      4096 Nov 21 05:58 shared
[2025-11-21 06:09:11] -rw-r--r--. 2 boinc boinc    590097 Nov 21 05:58 input.tar.gz
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc         0 Nov 21 05:58 boinc_lockfile
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc      2783 Nov 21 05:58 pandaJob.out
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc    989817 Nov 21 05:58 agis_schedconf.cvmfs.json
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc   1526164 Nov 21 05:59 agis_ddmendpoints.agis.ALL.json
[2025-11-21 06:09:11] drwx------. 5 boinc boinc      4096 Nov 21 05:59 pilot3
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc       524 Nov 21 06:04 boinc_task_state.xml
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc       996 Nov 21 06:05 memory_monitor_summary.json
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc     52439 Nov 21 06:05 log.47533967._002481.job.log.tgz.1
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc        95 Nov 21 06:08 pilot_heartbeat.json
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc     10340 Nov 21 06:08 heartbeat.json
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc      4823 Nov 21 06:09 pilotlog.txt
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc      8192 Nov 21 06:09 boinc_mmap_file
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc        23 Nov 21 06:09 wrapper_checkpoint.txt
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc    128783 Nov 21 06:09 log.47533967._002481.job.log.1
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc       186 Nov 21 06:09 output.list
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc       620 Nov 21 06:09 runtime_log
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc    204800 Nov 21 06:09 result.tar.gz
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc      8636 Nov 21 06:09 runtime_log.err
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc       644 Nov 21 06:09 3QeLDmOWZg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmf9IKDmvXIiDo.diag
[2025-11-21 06:09:11] -rw-r--r--. 1 boinc boinc     22684 Nov 21 06:09 stderr.txt
[2025-11-21 06:09:11] No HITS result produced
[2025-11-21 06:09:11]  *** Contents of shared directory: ***
[2025-11-21 06:09:11] total 402660
[2025-11-21 06:09:11] -rw-r--r--. 2 boinc boinc 411503818 Nov 21 05:58 ATLAS.root_0
[2025-11-21 06:09:11] -rw-r--r--. 2 boinc boinc     15847 Nov 21 05:58 start_atlas.sh
[2025-11-21 06:09:11] -rw-r--r--. 2 boinc boinc    590097 Nov 21 05:58 input.tar.gz
[2025-11-21 06:09:11] -rw-------. 1 boinc boinc    204800 Nov 21 06:09 result.tar.gz
06:09:12 (3777632): run_atlas exited; CPU time 90.913834
06:09:12 (3777632): called boinc_finish(0)

</stderr_txt>
]]>

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