Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:49:58 (2154338): wrapper (7.7.26015): starting
07:49:58 (2154338): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 07:49:58] Arguments: --nthreads 8
[2025-11-21 07:49:58] Threads: 8
[2025-11-21 07:49:58] Checking for CVMFS
[2025-11-21 07:49:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 07:49:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 07:49:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 07:49:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 07:49:58] 2.13.2.0 5784 25698 175372 153128 3 88 32452251 39288833 4485 16776704 0 13660045 99.684 9715751 33583 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 07:49:58] CVMFS is ok
[2025-11-21 07:49:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 07:49:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 07:49:58] Further information can be found at the LHC@home message board.
[2025-11-21 07:49:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 07:49:58] Checking for apptainer binary...
[2025-11-21 07:49:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 07:49:58] Running /usr/bin/apptainer --version
[2025-11-21 07:49:58] apptainer version 1.4.4-1.el9
[2025-11-21 07:49:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 07:49:58] c-210-12.aglt2.org
[2025-11-21 07:49:58] apptainer works
[2025-11-21 07:49:58] Set ATHENA_PROC_NUMBER=8
[2025-11-21 07:49:58] Set ATHENA_CORE_NUMBER=8
[2025-11-21 07:49:58] Starting ATLAS job with PandaID=6893876907
[2025-11-21 07:49:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:28:09 (942279): wrapper (7.7.26015): starting
19:28:09 (942279): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 19:28:09] Arguments: --nthreads 9
[2025-11-22 19:28:09] Threads: 9
[2025-11-22 19:28:09] This job has been restarted, cleaning up previous attempt
[2025-11-22 19:28:09] Checking for CVMFS
[2025-11-22 19:28:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:28:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:28:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:28:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:28:11] 2.13.2.0 5784 27836 182108 153191 3 104 37952072 39288833 7144 16776704 0 16640467 99.721 10737472 33481 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 19:28:11] CVMFS is ok
[2025-11-22 19:28:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:28:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:28:11] Further information can be found at the LHC@home message board.
[2025-11-22 19:28:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:28:11] Checking for apptainer binary...
[2025-11-22 19:28:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 19:28:11] Running /usr/bin/apptainer --version
[2025-11-22 19:28:11] apptainer version 1.4.4-1.el9
[2025-11-22 19:28:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:28:12] c-210-12.aglt2.org
[2025-11-22 19:28:12] apptainer works
[2025-11-22 19:28:13] Set ATHENA_PROC_NUMBER=9
[2025-11-22 19:28:13] Set ATHENA_CORE_NUMBER=9
[2025-11-22 19:28:13] Starting ATLAS job with PandaID=6893876907
[2025-11-22 19:28:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:31:10 (1393321): wrapper (7.7.26015): starting
00:31:10 (1393321): wrapper: running run_atlas (--nthreads 10)
[2025-11-23 00:31:10] Arguments: --nthreads 10
[2025-11-23 00:31:10] Threads: 10
[2025-11-23 00:31:10] This job has been restarted, cleaning up previous attempt
[2025-11-23 00:31:10] Checking for CVMFS
[2025-11-23 00:31:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:31:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:31:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:31:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:31:12] 2.13.2.0 5784 28139 180084 153198 1 103 23027125 39288833 7148 16776704 0 17113092 99.703 11407129 32897 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:31:12] CVMFS is ok
[2025-11-23 00:31:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:31:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:31:12] Further information can be found at the LHC@home message board.
[2025-11-23 00:31:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:31:12] Checking for apptainer binary...
[2025-11-23 00:31:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:31:12] Running /usr/bin/apptainer --version
[2025-11-23 00:31:12] apptainer version 1.4.4-1.el9
[2025-11-23 00:31:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:31:13] c-210-12.aglt2.org
[2025-11-23 00:31:13] apptainer works
[2025-11-23 00:31:13] Set ATHENA_PROC_NUMBER=10
[2025-11-23 00:31:13] Set ATHENA_CORE_NUMBER=10
[2025-11-23 00:31:13] Starting ATLAS job with PandaID=6893876907
[2025-11-23 00:31:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:37:12]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:37:12] 2025-11-25 00:36:18,600 | INFO     | time since job start (155060s) is within the limit (172800.0s)
[2025-11-24 19:37:12] 2025-11-25 00:36:18,982 | INFO     | monitor loop #8711: job 0:6893876907 is in state 'finished'
[2025-11-24 19:37:12] 2025-11-25 00:36:18,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:37:12] 2025-11-25 00:36:20,625 | INFO     | time since job start (155062s) is within the limit (172800.0s)
[2025-11-24 19:37:12] 2025-11-25 00:36:21,568 | INFO     | monitor loop #8712: job 0:6893876907 is in state 'finished'
[2025-11-24 19:37:12] 2025-11-25 00:36:21,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:37:12] 2025-11-25 00:36:22,692 | INFO     | time since job start (155064s) is within the limit (172800.0s)
[2025-11-24 19:37:12] 2025-11-25 00:36:24,112 | INFO     | monitor loop #8713: job 0:6893876907 is in state 'finished'
[2025-11-24 19:37:12] 2025-11-25 00:36:24,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:37:12] 2025-11-25 00:36:24,699 | INFO     | time since job start (155066s) is within the limit (172800.0s)
[2025-11-24 19:37:12] 2025-11-25 00:36:26,631 | INFO     | monitor loop #8714: job 0:6893876907 is in state 'finished'
[2025-11-24 19:37:12] 2025-11-25 00:36:26,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:37:12] 2025-11-25 00:36:26,706 | INFO     | time since job start (155068s) is within the limit (172800.0s)
[2025-11-24 19:37:12] 2025-11-25 00:36:28,585 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 19:37:12] 2025-11-25 00:36:28,599 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2089499999993
[2025-11-24 19:37:12] 2025-11-25 00:36:28,608 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893876907/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:37:12] 2025-11-25 00:36:28,609 | INFO     | extracted standard info from prmon json
[2025-11-24 19:37:12] 2025-11-25 00:36:28,609 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:37:12] 2025-11-25 00:36:28,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:37:12] 2025-11-25 00:36:28,729 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:37:12] 2025-11-25 00:36:28,738 | INFO     | sum of square deviations: 5081366498266.3125
[2025-11-24 19:37:12] 2025-11-25 00:36:28,910 | INFO     | time since job start (155070s) is within the limit (172800.0s)
[2025-11-24 19:37:12] 2025-11-25 00:36:29,178 | INFO     | monitor loop #8715: job 0:6893876907 is in state 'finished'
[2025-11-24 19:37:12] 2025-11-25 00:36:29,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:37:12] 2025-11-25 00:36:29,200 | INFO     | sum of deviations: 12476513650098.719
[2025-11-24 19:37:12] 2025-11-25 00:36:29,200 | INFO     | mean x: 1763953468.28937
[2025-11-24 19:37:12] 2025-11-25 00:36:29,201 | INFO     | mean y: 3188564.93503937
[2025-11-24 19:37:12] 2025-11-25 00:36:29,201 | INFO     | intersect: -4327927785.904859
[2025-11-24 19:37:12] 2025-11-25 00:36:29,204 | INFO     | chi2: 51.65591108238619
[2025-11-24 19:37:12] 2025-11-25 00:36:29,207 | INFO     | sum of square deviations: 5051425110776.219
[2025-11-24 19:37:12] 2025-11-25 00:36:29,578 | INFO     | sum of deviations: 13617757705015.537
[2025-11-24 19:37:12] 2025-11-25 00:36:29,578 | INFO     | mean x: 1763953315.8086784
[2025-11-24 19:37:12] 2025-11-25 00:36:29,579 | INFO     | mean y: 3194376.885601578
[2025-11-24 19:37:12] 2025-11-25 00:36:29,583 | INFO     | intersect: -4752114933.035094
[2025-11-24 19:37:12] 2025-11-25 00:36:29,591 | INFO     | chi2: 46.79514965474516
[2025-11-24 19:37:12] 2025-11-25 00:36:29,591 | INFO     | current chi2=46.79514965474516 (change=9.409884223876306 %)
[2025-11-24 19:37:12] 2025-11-25 00:36:29,591 | INFO     | right removable region: 2534
[2025-11-24 19:37:12] 2025-11-25 00:36:29,599 | INFO     | sum of square deviations: 5051409943126.2
[2025-11-24 19:37:12] 2025-11-25 00:36:29,945 | INFO     | sum of deviations: 11397797470993.969
[2025-11-24 19:37:12] 2025-11-25 00:36:29,945 | INFO     | mean x: 1763953620.8086784
[2025-11-24 19:37:12] 2025-11-25 00:36:29,945 | INFO     | mean y: 3194056.6721893493
[2025-11-24 19:37:12] 2025-11-25 00:36:29,945 | INFO     | intersect: -3976919682.7724414
[2025-11-24 19:37:12] 2025-11-25 00:36:29,953 | INFO     | chi2: 48.05272983863057
[2025-11-24 19:37:12] 2025-11-25 00:36:29,953 | INFO     | current chi2=48.05272983863057 (change=6.975351258462744 %)
[2025-11-24 19:37:12] 2025-11-25 00:36:29,953 | INFO     | left removable region: 10
[2025-11-24 19:37:12] 2025-11-25 00:36:29,961 | INFO     | sum of square deviations: 4985938435883.286
[2025-11-24 19:37:12] 2025-11-25 00:36:30,617 | INFO     | sum of deviations: 11944924855049.336
[2025-11-24 19:37:12] 2025-11-25 00:36:30,618 | INFO     | mean x: 1763953590.3514264
[2025-11-24 19:37:12] 2025-11-25 00:36:30,618 | INFO     | mean y: 3205288.020998415
[2025-11-24 19:37:12] 2025-11-25 00:36:30,618 | INFO     | intersect: -4222738003.396628
[2025-11-24 19:37:12] 2025-11-25 00:36:30,645 | INFO     | chi2: 40.219530876727504
[2025-11-24 19:37:12] 2025-11-25 00:36:30,645 | INFO     | current memory leak: 2.40 B/s (using 2524 data points, chi2=40.22)
[2025-11-24 19:37:12] 2025-11-25 00:36:30,652 | INFO     | could have reported an average CPU frequency of 2599 MHz (87 samples)
[2025-11-24 19:37:12] 2025-11-25 00:36:30,652 | INFO     | ..............................
[2025-11-24 19:37:12] 2025-11-25 00:36:30,652 | INFO     | . Timing measurements:
[2025-11-24 19:37:12] 2025-11-25 00:36:30,652 | INFO     | . get job = 0 s
[2025-11-24 19:37:12] 2025-11-25 00:36:30,652 | INFO     | . initial setup = 3 s
[2025-11-24 19:37:12] 2025-11-25 00:36:30,652 | INFO     | . payload setup = 29 s
[2025-11-24 19:37:12] 2025-11-25 00:36:30,653 | INFO     | . stage-in = 0 s
[2025-11-24 19:37:12] 2025-11-25 00:36:30,653 | INFO     | . payload execution = 154928 s
[2025-11-24 19:37:12] 2025-11-25 00:36:30,653 | INFO     | . stage-out = 17 s
[2025-11-24 19:37:12] 2025-11-25 00:36:30,653 | INFO     | . log creation = 9 s
[2025-11-24 19:37:12] 2025-11-25 00:36:30,653 | INFO     | ..............................
[2025-11-24 19:37:12] 2025-11-25 00:36:31,429 | INFO     | time since job start (155073s) is within the limit (172800.0s)
[2025-11-24 19:37:12] 2025-11-25 00:36:32,379 | INFO     | 
[2025-11-24 19:37:12] 2025-11-25 00:36:32,379 | INFO     | job summary report
[2025-11-24 19:37:12] 2025-11-25 00:36:32,379 | INFO     | --------------------------------------------------
[2025-11-24 19:37:12] 2025-11-25 00:36:32,379 | INFO     | PanDA job id: 6893876907
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | task id: 47523449
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | errors: (none)
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | pilot state: finished 
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | transexitcode: 0
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | exeerrorcode: 0
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | exeerrordiag: 
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | exitcode: 0
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | exitmsg: OK
[2025-11-24 19:37:12] 2025-11-25 00:36:32,380 | INFO     | cpuconsumptiontime: 302414 s
[2025-11-24 19:37:12] 2025-11-25 00:36:32,381 | INFO     | nevents: 1000
[2025-11-24 19:37:12] 2025-11-25 00:36:32,381 | INFO     | neventsw: 0
[2025-11-24 19:37:12] 2025-11-25 00:36:32,381 | INFO     | pid: 1424476
[2025-11-24 19:37:12] 2025-11-25 00:36:32,381 | INFO     | pgrp: 1424476
[2025-11-24 19:37:12] 2025-11-25 00:36:32,381 | INFO     | corecount: 10
[2025-11-24 19:37:12] 2025-11-25 00:36:32,381 | INFO     | event service: False
[2025-11-24 19:37:12] 2025-11-25 00:36:32,381 | INFO     | sizes: {0: 2297928, 1: 2298613, 2: 2298641, 3: 2298840, 14: 2298840, 22: 2299130, 25: 2299286, 154962: 2395343, 154964: 2395342, 154982: 2405183, 154985: 2405239, 
[2025-11-24 19:37:12] 2025-11-25 00:36:32,381 | INFO     | --------------------------------------------------
[2025-11-24 19:37:12] 2025-11-25 00:36:32,381 | INFO     | 
[2025-11-24 19:37:12] 2025-11-25 00:36:32,382 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 19:37:12] 2025-11-25 00:36:32,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,613 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,615 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:37:12] 2025-11-25 00:36:32,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,615 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:37:12] 2025-11-25 00:36:32,617 | INFO     | job 6893876907 has completed (purged errors)
[2025-11-24 19:37:12] 2025-11-25 00:36:32,618 | INFO     | overall cleanup function is called
[2025-11-24 19:37:12] 2025-11-25 00:36:33,658 | INFO     | --- collectZombieJob: --- 10, [1424476]
[2025-11-24 19:37:12] 2025-11-25 00:36:33,659 | INFO     | zombie collector waiting for pid 1424476
[2025-11-24 19:37:12] 2025-11-25 00:36:33,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:37:12] 2025-11-25 00:36:33,659 | INFO     | collected zombie processes
[2025-11-24 19:37:12] 2025-11-25 00:36:33,659 | INFO     | will attempt to kill all subprocesses of pid=1424476
[2025-11-24 19:37:12] 2025-11-25 00:36:34,603 | INFO     | process IDs to be killed: [1424476] (in reverse order)
[2025-11-24 19:37:12] 2025-11-25 00:36:34,854 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:37:12] 2025-11-25 00:36:34,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:37:12] 2025-11-25 00:36:34,880 | INFO     | did not find any defunct processes belonging to 1424476
[2025-11-24 19:37:12] 2025-11-25 00:36:34,908 | INFO     | did not find any defunct processes belonging to 1424476
[2025-11-24 19:37:12] 2025-11-25 00:36:34,913 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:37:12] 2025-11-25 00:36:34,913 | INFO     | ready for new job
[2025-11-24 19:37:12] 2025-11-25 00:36:34,913 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:37:12] 2025-11-25 00:36:34,933 | INFO     | ***************************************
[2025-11-24 19:37:12] 2025-11-25 00:36:34,934 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:37:12] 2025-11-25 00:36:34,934 | INFO     | ***************************************
[2025-11-24 19:37:12] 2025-11-25 00:36:34,934 | INFO     | 
[2025-11-24 19:37:12] 2025-11-25 00:36:34,936 | INFO     | architecture information:
[2025-11-24 19:37:12] 2025-11-25 00:36:34,940 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:37:12] 2025-11-25 00:36:35,138 | INFO     | cat /etc/os-release:
[2025-11-24 19:37:12] NAME="CentOS Linux"
[2025-11-24 19:37:12] VERSION="7 (Core)"
[2025-11-24 19:37:12] ID="centos"
[2025-11-24 19:37:12] ID_LIKE="rhel fedora"
[2025-11-24 19:37:12] VERSION_ID="7"
[2025-11-24 19:37:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:37:12] ANSI_COLOR="0;31"
[2025-11-24 19:37:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:37:12] HOME_URL="https://www.centos.org/"
[2025-11-24 19:37:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:37:12] 
[2025-11-24 19:37:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:37:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:37:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:37:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:37:12] 
[2025-11-24 19:37:12] 2025-11-25 00:36:35,139 | INFO     | ***************************************
[2025-11-24 19:37:12] 2025-11-25 00:36:35,676 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 19:37:12] 2025-11-25 00:36:36,040 | INFO     | sufficient remaining disk space (49586110464 B)
[2025-11-24 19:37:12] 2025-11-25 00:36:36,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:37:12] 2025-11-25 00:36:36,041 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:37:12] 2025-11-25 00:36:36,041 | INFO     | update_server=False
[2025-11-24 19:37:12] 2025-11-25 00:36:36,041 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:37:12] 2025-11-25 00:36:36,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:37:12] 2025-11-25 00:36:36,060 | INFO     | aborting loop
[2025-11-24 19:37:12] 2025-11-25 00:36:36,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:37:12] 2025-11-25 00:36:36,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:37:12] 2025-11-25 00:36:36,675 | INFO     | all job control threads have been joined
[2025-11-24 19:37:12] 2025-11-25 00:36:36,794 | INFO     | all data control threads have been joined
[2025-11-24 19:37:12] 2025-11-25 00:36:37,047 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:37,069 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:37,124 | INFO     | [job] validate thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:37,133 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:37,288 | INFO     | all payload control threads have been joined
[2025-11-24 19:37:12] 2025-11-25 00:36:37,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:37:12] 2025-11-25 00:36:37,552 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:37,586 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:37,661 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:37,704 | INFO     | [job] control thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:37,800 | INFO     | [data] control thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:37,858 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:38,167 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:38,294 | INFO     | [payload] control thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:38,416 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:38,494 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:38,558 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:36:40,604 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:37:12] 2025-11-25 00:37:02,787 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:37:12] 2025-11-25 00:37:04,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359805888320)>', '<ExcThread(monitor, started 140358717531904)>']
[2025-11-24 19:37:12] 2025-11-25 00:37:05,185 | INFO     | PID=1404305 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:37:12] 2025-11-25 00:37:05,186 | INFO     | .. there are 8 such processes running
[2025-11-24 19:37:12] 2025-11-25 00:37:05,187 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:37:12] 2025-11-25 00:37:05,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:37:12] 2025-11-25 00:37:05,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:37:12] 2025-11-25 00:37:05,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:37:12] 2025-11-25 00:37:05,187 | INFO     | [monitor] control thread has ended
[2025-11-24 19:37:12] 2025-11-25 00:37:09,817 | INFO     | all workflow threads have been joined
[2025-11-24 19:37:12] 2025-11-25 00:37:09,893 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:37:12] 2025-11-25 00:37:09,894 | INFO     | traces error code: 0
[2025-11-24 19:37:12] 2025-11-25 00:37:09,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:37:12] 2025-11-25 00:37:10,157 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:37:12] 2025-11-25 00:37:10,182 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:37:12] 2025-11-25 00:37:10,203 [wrapper] pilotpid: 1404305
[2025-11-24 19:37:12] 2025-11-25 00:37:10,228 [wrapper] Pilot exit status: 0
[2025-11-24 19:37:12] 2025-11-25 00:37:10,313 [wrapper] pandaids: 6893876907 6893876907 6893876907
[2025-11-24 19:37:12] 2025-11-25 00:37:10,446 [wrapper] cleanup supervisor_pilot  502478 1404306
[2025-11-24 19:37:12] 2025-11-25 00:37:10,481 [wrapper] Test setup, not cleaning
[2025-11-24 19:37:12] 2025-11-25 00:37:10,548 [wrapper] apfmon messages muted
[2025-11-24 19:37:12] 2025-11-25 00:37:10,581 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:37:12] 2025-11-25 00:37:10,623 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:37:12]  *** Error codes and diagnostics ***
[2025-11-24 19:37:12]     "exeErrorCode": 0,
[2025-11-24 19:37:12]     "exeErrorDiag": "",
[2025-11-24 19:37:12]     "pilotErrorCode": 0,
[2025-11-24 19:37:12]     "pilotErrorDiag": "",
[2025-11-24 19:37:12]  *** Listing of results directory ***
[2025-11-24 19:37:12] total 1741208
[2025-11-24 19:37:12] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 12:52 pilot3.tar.gz
[2025-11-24 19:37:12] -rwx------. 1 boincer umatlas     36292 Nov 20 13:01 runpilot2-wrapper.sh
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 13:01 queuedata.json
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas       100 Nov 21 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:37:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 07:49 run_atlas
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas       105 Nov 21 07:49 job.xml
[2025-11-24 19:37:12] -rw-r--r--. 3 boincer umatlas 411336748 Nov 21 07:49 EVNT.47493127._000783.pool.root.1
[2025-11-24 19:37:12] -rw-r--r--. 3 boincer umatlas 411336748 Nov 21 07:49 ATLAS.root_0
[2025-11-24 19:37:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 07:49 start_atlas.sh
[2025-11-24 19:37:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 07:49 shared
[2025-11-24 19:37:12] -rw-r--r--. 2 boincer umatlas    590098 Nov 21 07:49 input.tar.gz
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas         0 Nov 21 07:49 boinc_lockfile
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:31 pandaJob.out
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas        57 Nov 23 00:31 setup.sh.local
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas    989784 Nov 23 00:31 agis_schedconf.cvmfs.json
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas       534 Nov 24 18:11 boinc_task_state.xml
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas 911963672 Nov 24 19:28 HITS.47523449._007825.pool.root.1
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas      1073 Nov 24 19:35 memory_monitor_summary.json
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:35 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas   3429092 Nov 24 19:35 log.47523449._007825.job.log.tgz.1
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas      6663 Nov 24 19:36 init_data.xml
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas      8671 Nov 24 19:36 heartbeat.json
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas        96 Nov 24 19:37 pilot_heartbeat.json
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas      4823 Nov 24 19:37 pilotlog.txt
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas  18781115 Nov 24 19:37 log.47523449._007825.job.log.1
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas       353 Nov 24 19:37 output.list
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:37 boinc_mmap_file
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas        30 Nov 24 19:37 wrapper_checkpoint.txt
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas       620 Nov 24 19:37 runtime_log
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas  22231040 Nov 24 19:37 result.tar.gz
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas       919 Nov 24 19:37 Uk2MDmd9Ng8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcwGKDmIjKuem.diag
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas      9431 Nov 24 19:37 runtime_log.err
[2025-11-24 19:37:12] -rw-r--r--. 1 boincer umatlas     26145 Nov 24 19:37 stderr.txt
[2025-11-24 19:37:12] HITS file was successfully produced:
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas 911963672 Nov 24 19:28 shared/HITS.pool.root.1
[2025-11-24 19:37:12]  *** Contents of shared directory: ***
[2025-11-24 19:37:12] total 1314608
[2025-11-24 19:37:12] -rw-r--r--. 3 boincer umatlas 411336748 Nov 21 07:49 ATLAS.root_0
[2025-11-24 19:37:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 07:49 start_atlas.sh
[2025-11-24 19:37:12] -rw-r--r--. 2 boincer umatlas    590098 Nov 21 07:49 input.tar.gz
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas 911963672 Nov 24 19:28 HITS.pool.root.1
[2025-11-24 19:37:12] -rw-------. 1 boincer umatlas  22231040 Nov 24 19:37 result.tar.gz
19:37:14 (1393321): run_atlas exited; CPU time 304688.633824
19:37:14 (1393321): called boinc_finish(0)

</stderr_txt>
]]>

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