Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:23:46 (1436789): wrapper (7.7.26015): starting
08:23:46 (1436789): wrapper: running run_atlas (--nthreads 10)
[2025-11-21 08:23:46] Arguments: --nthreads 10
[2025-11-21 08:23:46] Threads: 10
[2025-11-21 08:23:46] Checking for CVMFS
[2025-11-21 08:23:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 08:23:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 08:23:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 08:23:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 08:23:46] 2.13.2.0 10847 28694 193104 153129 1 89 38547818 40960000 5091 16776704 0 23452838 99.716 15650475 38434 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 08:23:46] CVMFS is ok
[2025-11-21 08:23:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 08:23:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 08:23:46] Further information can be found at the LHC@home message board.
[2025-11-21 08:23:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 08:23:46] Checking for apptainer binary...
[2025-11-21 08:23:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 08:23:46] Running /usr/bin/apptainer --version
[2025-11-21 08:23:46] apptainer version 1.4.4-1.el9
[2025-11-21 08:23:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 08:23:46] c-210-35-4.aglt2.org
[2025-11-21 08:23:46] apptainer works
[2025-11-21 08:23:46] Set ATHENA_PROC_NUMBER=10
[2025-11-21 08:23:46] Set ATHENA_CORE_NUMBER=10
[2025-11-21 08:23:46] Starting ATLAS job with PandaID=6894239083
[2025-11-21 08:23:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 03:45:16]  *** The last 200 lines of the pilot log: ***
[2025-11-22 03:45:16] 2025-11-22 05:49:28,169 | INFO     | monitor loop #3500: job 0:6894239083 is in state 'finished'
[2025-11-22 03:45:16] 2025-11-22 05:49:28,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:45:16] 2025-11-22 05:49:28,351 | INFO     | time since job start (59131s) is within the limit (172800.0s)
[2025-11-22 03:45:16] 2025-11-22 05:49:30,392 | INFO     | time since job start (59133s) is within the limit (172800.0s)
[2025-11-22 03:45:16] 2025-11-22 05:49:30,696 | INFO     | monitor loop #3501: job 0:6894239083 is in state 'finished'
[2025-11-22 03:45:16] 2025-11-22 05:49:30,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:45:16] 2025-11-22 05:49:33,202 | INFO     | monitor loop #3502: job 0:6894239083 is in state 'finished'
[2025-11-22 03:45:16] 2025-11-22 05:49:33,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:45:16] 2025-11-22 05:49:34,232 | INFO     | PID=1440461 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 03:45:16] 2025-11-22 05:49:34,232 | INFO     | .. there are 13 such processes running
[2025-11-22 03:45:16] 2025-11-22 05:49:35,236 | INFO     | time since job start (59138s) is within the limit (172800.0s)
[2025-11-22 03:45:16] 2025-11-22 05:49:35,733 | INFO     | monitor loop #3503: job 0:6894239083 is in state 'finished'
[2025-11-22 03:45:16] 2025-11-22 05:49:35,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:45:16] 2025-11-22 05:49:37,244 | INFO     | time since job start (59140s) is within the limit (172800.0s)
[2025-11-22 03:45:16] 2025-11-22 05:49:38,247 | INFO     | monitor loop #3504: job 0:6894239083 is in state 'finished'
[2025-11-22 03:45:16] 2025-11-22 05:49:38,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:45:16] 2025-11-22 05:49:39,253 | INFO     | time since job start (59142s) is within the limit (172800.0s)
[2025-11-22 03:45:16] 2025-11-22 05:49:39,340 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 03:45:16] 2025-11-22 05:49:39,354 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2652.9454464285714
[2025-11-22 03:45:16] 2025-11-22 05:49:39,373 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6894239083/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 03:45:16] 2025-11-22 05:49:39,374 | INFO     | extracted standard info from prmon json
[2025-11-22 03:45:16] 2025-11-22 05:49:39,374 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 03:45:16] 2025-11-22 05:49:39,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 03:45:16] 2025-11-22 05:49:39,459 | INFO     | fitting pss+swap vs Time
[2025-11-22 03:45:16] 2025-11-22 05:49:39,461 | INFO     | sum of square deviations: 282143759219.8953
[2025-11-22 03:45:16] 2025-11-22 05:49:39,586 | INFO     | sum of deviations: 15593431928.894867
[2025-11-22 03:45:16] 2025-11-22 05:49:39,586 | INFO     | mean x: 1763760992.2631578
[2025-11-22 03:45:16] 2025-11-22 05:49:39,586 | INFO     | mean y: 3247160.7729618163
[2025-11-22 03:45:16] 2025-11-22 05:49:39,586 | INFO     | intersect: -94231823.15969518
[2025-11-22 03:45:16] 2025-11-22 05:49:39,587 | INFO     | chi2: 21.3687767118247
[2025-11-22 03:45:16] 2025-11-22 05:49:39,593 | INFO     | sum of square deviations: 277800706959.3323
[2025-11-22 03:45:16] 2025-11-22 05:49:39,627 | INFO     | sum of deviations: 411642888163.8161
[2025-11-22 03:45:16] 2025-11-22 05:49:39,628 | INFO     | mean x: 1763760839.7946057
[2025-11-22 03:45:16] 2025-11-22 05:49:39,628 | INFO     | mean y: 3261060.887966805
[2025-11-22 03:45:16] 2025-11-22 05:49:39,628 | INFO     | intersect: -2610265787.442104
[2025-11-22 03:45:16] 2025-11-22 05:49:39,629 | INFO     | chi2: 17.377801349106985
[2025-11-22 03:45:16] 2025-11-22 05:49:39,629 | INFO     | current chi2=17.377801349106985 (change=18.676667441188883 %)
[2025-11-22 03:45:16] 2025-11-22 05:49:39,629 | INFO     | right removable region: 963
[2025-11-22 03:45:16] 2025-11-22 05:49:39,630 | INFO     | sum of square deviations: 277797181597.92035
[2025-11-22 03:45:16] 2025-11-22 05:49:39,667 | INFO     | sum of deviations: -237772989316.73953
[2025-11-22 03:45:16] 2025-11-22 05:49:39,671 | INFO     | mean x: 1763761144.7935684
[2025-11-22 03:45:16] 2025-11-22 05:49:39,672 | INFO     | mean y: 3256036.8807053943
[2025-11-22 03:45:16] 2025-11-22 05:49:39,672 | INFO     | intersect: 1512899718.0224328
[2025-11-22 03:45:16] 2025-11-22 05:49:39,673 | INFO     | chi2: 19.64223750551759
[2025-11-22 03:45:16] 2025-11-22 05:49:39,673 | INFO     | current chi2=19.64223750551759 (change=8.079728800534046 %)
[2025-11-22 03:45:16] 2025-11-22 05:49:39,673 | INFO     | left removable region: 10
[2025-11-22 03:45:16] 2025-11-22 05:49:39,674 | INFO     | sum of square deviations: 268396572133.2679
[2025-11-22 03:45:16] 2025-11-22 05:49:39,711 | INFO     | sum of deviations: 171204351197.30823
[2025-11-22 03:45:16] 2025-11-22 05:49:39,712 | INFO     | mean x: 1763761114.3588667
[2025-11-22 03:45:16] 2025-11-22 05:49:39,712 | INFO     | mean y: 3274728.5078698844
[2025-11-22 03:45:16] 2025-11-22 05:49:39,712 | INFO     | intersect: -1121790226.1254406
[2025-11-22 03:45:16] 2025-11-22 05:49:39,713 | INFO     | chi2: 14.93026646581081
[2025-11-22 03:45:16] 2025-11-22 05:49:39,713 | INFO     | current memory leak: 0.64 B/s (using 953 data points, chi2=14.93)
[2025-11-22 03:45:16] 2025-11-22 05:49:39,714 | INFO     | could have reported an average CPU frequency of 2914 MHz (36 samples)
[2025-11-22 03:45:16] 2025-11-22 05:49:39,715 | INFO     | ..............................
[2025-11-22 03:45:16] 2025-11-22 05:49:39,715 | INFO     | . Timing measurements:
[2025-11-22 03:45:16] 2025-11-22 05:49:39,715 | INFO     | . get job = 0 s
[2025-11-22 03:45:16] 2025-11-22 05:49:39,715 | INFO     | . initial setup = 2 s
[2025-11-22 03:45:16] 2025-11-22 05:49:39,715 | INFO     | . payload setup = 5 s
[2025-11-22 03:45:16] 2025-11-22 05:49:39,715 | INFO     | . stage-in = 0 s
[2025-11-22 03:45:16] 2025-11-22 05:49:39,719 | INFO     | . payload execution = 59066 s
[2025-11-22 03:45:16] 2025-11-22 05:49:39,719 | INFO     | . stage-out = 7 s
[2025-11-22 03:45:16] 2025-11-22 05:49:39,719 | INFO     | . log creation = 1 s
[2025-11-22 03:45:16] 2025-11-22 05:49:39,719 | INFO     | ..............................
[2025-11-22 03:45:16] 2025-11-22 05:49:39,896 | INFO     | 
[2025-11-22 03:45:16] 2025-11-22 05:49:39,922 | INFO     | job summary report
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | --------------------------------------------------
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | PanDA job id: 6894239083
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | task id: 47533967
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | errors: (none)
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | pilot state: finished 
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | transexitcode: 0
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | exeerrorcode: 0
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | exeerrordiag: 
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | exitcode: 0
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | exitmsg: OK
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | cpuconsumptiontime: 234215 s
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | nevents: 1000
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | neventsw: 0
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | pid: 1448867
[2025-11-22 03:45:16] 2025-11-22 05:49:39,923 | INFO     | pgrp: 1448867
[2025-11-22 03:45:16] 2025-11-22 05:49:39,924 | INFO     | corecount: 10
[2025-11-22 03:45:16] 2025-11-22 05:49:39,924 | INFO     | event service: False
[2025-11-22 03:45:16] 2025-11-22 05:49:39,924 | INFO     | sizes: {0: 2298691, 1: 2298833, 4: 2299095, 11: 2299123, 59073: 2349808, 59074: 2349807, 59082: 2358985, 59086: 2359041, 59128: 2359287}
[2025-11-22 03:45:16] 2025-11-22 05:49:39,924 | INFO     | --------------------------------------------------
[2025-11-22 03:45:16] 2025-11-22 05:49:39,924 | INFO     | 
[2025-11-22 03:45:16] 2025-11-22 05:49:39,924 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-22 03:45:16] 2025-11-22 05:49:40,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 03:45:16] 2025-11-22 05:49:40,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,084 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 03:45:16] 2025-11-22 05:49:40,084 | INFO     | job 6894239083 has completed (purged errors)
[2025-11-22 03:45:16] 2025-11-22 05:49:40,084 | INFO     | overall cleanup function is called
[2025-11-22 03:45:16] 2025-11-22 05:49:41,167 | INFO     | --- collectZombieJob: --- 10, [1448867]
[2025-11-22 03:45:16] 2025-11-22 05:49:41,167 | INFO     | zombie collector waiting for pid 1448867
[2025-11-22 03:45:16] 2025-11-22 05:49:41,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 03:45:16] 2025-11-22 05:49:41,168 | INFO     | collected zombie processes
[2025-11-22 03:45:16] 2025-11-22 05:49:41,168 | INFO     | will attempt to kill all subprocesses of pid=1448867
[2025-11-22 03:45:16] 2025-11-22 05:49:44,095 | INFO     | process IDs to be killed: [1448867] (in reverse order)
[2025-11-22 03:45:16] 2025-11-22 05:49:45,053 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 03:45:16] 2025-11-22 05:49:45,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 03:45:16] 2025-11-22 05:49:45,233 | INFO     | did not find any defunct processes belonging to 1448867
[2025-11-22 03:45:16] 2025-11-22 05:49:45,419 | INFO     | did not find any defunct processes belonging to 1448867
[2025-11-22 03:45:16] 2025-11-22 05:49:45,429 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 03:45:16] 2025-11-22 05:49:45,429 | INFO     | ready for new job
[2025-11-22 03:45:16] 2025-11-22 05:49:45,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 03:45:16] 2025-11-22 05:49:45,445 | INFO     | ***************************************
[2025-11-22 03:45:16] 2025-11-22 05:49:45,445 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 03:45:16] 2025-11-22 05:49:45,445 | INFO     | ***************************************
[2025-11-22 03:45:16] 2025-11-22 05:49:45,445 | INFO     | 
[2025-11-22 03:45:16] 2025-11-22 05:49:45,449 | INFO     | architecture information:
[2025-11-22 03:45:16] 2025-11-22 05:49:45,450 | INFO     | executing command: cat /etc/os-release
[2025-11-22 03:45:16] 2025-11-22 05:49:45,598 | INFO     | cat /etc/os-release:
[2025-11-22 03:45:16] NAME="CentOS Linux"
[2025-11-22 03:45:16] VERSION="7 (Core)"
[2025-11-22 03:45:16] ID="centos"
[2025-11-22 03:45:16] ID_LIKE="rhel fedora"
[2025-11-22 03:45:16] VERSION_ID="7"
[2025-11-22 03:45:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 03:45:16] ANSI_COLOR="0;31"
[2025-11-22 03:45:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 03:45:16] HOME_URL="https://www.centos.org/"
[2025-11-22 03:45:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 03:45:16] 
[2025-11-22 03:45:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 03:45:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 03:45:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 03:45:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 03:45:16] 
[2025-11-22 03:45:16] 2025-11-22 05:49:45,598 | INFO     | ***************************************
[2025-11-22 03:45:16] 2025-11-22 05:49:46,102 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-22 03:45:16] 2025-11-22 05:49:46,267 | INFO     | sufficient remaining disk space (68077748224 B)
[2025-11-22 03:45:16] 2025-11-22 05:49:46,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 03:45:16] 2025-11-22 05:49:46,268 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 03:45:16] 2025-11-22 05:49:46,268 | INFO     | update_server=False
[2025-11-22 03:45:16] 2025-11-22 05:49:46,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 03:45:16] 2025-11-22 05:49:46,450 | INFO     | all job control threads have been joined
[2025-11-22 03:45:16] 2025-11-22 05:49:46,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:45:16] 2025-11-22 05:49:46,821 | INFO     | aborting loop
[2025-11-22 03:45:16] 2025-11-22 05:49:47,035 | INFO     | [monitor] cgroup control has ended
[2025-11-22 03:45:16] 2025-11-22 05:49:47,118 | INFO     | all data control threads have been joined
[2025-11-22 03:45:16] 2025-11-22 05:49:47,273 | INFO     | [job] retrieve thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:47,317 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:47,335 | INFO     | all payload control threads have been joined
[2025-11-22 03:45:16] 2025-11-22 05:49:47,338 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:47,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:47,480 | INFO     | [job] control thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:47,699 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 03:45:16] 2025-11-22 05:49:47,826 | INFO     | [job] job monitor thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:47,857 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:47,985 | INFO     | [payload] validate_post thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:48,124 | INFO     | [data] control thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:48,341 | INFO     | [payload] control thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:48,523 | INFO     | [data] copytool_in thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:48,676 | INFO     | [payload] failed_post thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:48,772 | INFO     | [job] validate thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:49,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:45:16] 2025-11-22 05:49:49,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 03:45:16] 2025-11-22 05:49:49,707 | INFO     | [data] copytool_out thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:50,067 | INFO     | [job] queue monitor thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:53,271 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 03:45:16] 2025-11-22 05:49:55,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451016750912)>', '<ExcThread(monitor, started 140450388240128)>']
[2025-11-22 03:45:16] 2025-11-22 05:50:00,290 | INFO     | all workflow threads have been joined
[2025-11-22 03:45:16] 2025-11-22 05:50:00,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 03:45:16] 2025-11-22 05:50:00,291 | INFO     | traces error code: 0
[2025-11-22 03:45:16] 2025-11-22 05:50:00,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 03:45:16] 2025-11-22 05:50:21,580 | INFO     | PID=1440461 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 03:45:16] 2025-11-22 05:50:21,580 | INFO     | .. there are 13 such processes running
[2025-11-22 03:45:16] 2025-11-22 05:50:21,581 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 03:45:16] 2025-11-22 05:50:21,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 03:45:16] 2025-11-22 05:50:21,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 03:45:16] 2025-11-22 05:50:21,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 03:45:16] 2025-11-22 05:50:21,582 | INFO     | [monitor] control thread has ended
[2025-11-22 03:45:16] 2025-11-22 05:50:23,937 [wrapper] ==== pilot stdout END ====
[2025-11-22 03:45:16] 2025-11-22 05:50:23,968 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 03:45:16] 2025-11-22 05:50:23,998 [wrapper] pilotpid: 1440461
[2025-11-22 03:45:16] 2025-11-22 05:50:24,025 [wrapper] Pilot exit status: 0
[2025-11-22 03:45:16] 2025-11-22 05:50:24,170 [wrapper] pandaids: 6894239083
[2025-11-22 03:45:16] 2025-11-22 05:50:24,870 [wrapper] cleanup supervisor_pilot 3000895 1440462
[2025-11-22 03:45:16] 2025-11-22 05:50:24,920 [wrapper] Test setup, not cleaning
[2025-11-22 03:45:16] 2025-11-22 05:50:24,980 [wrapper] apfmon messages muted
[2025-11-22 03:45:16] 2025-11-22 05:50:25,026 [wrapper] ==== wrapper stdout END ====
[2025-11-22 03:45:16] 2025-11-22 05:50:25,040 [wrapper] ==== wrapper stderr END ====
[2025-11-22 03:45:16]  *** Error codes and diagnostics ***
[2025-11-22 03:45:16]     "exeErrorCode": 0,
[2025-11-22 03:45:16]     "exeErrorDiag": "",
[2025-11-22 03:45:16]     "pilotErrorCode": 0,
[2025-11-22 03:45:16]     "pilotErrorDiag": "",
[2025-11-22 03:45:16]  *** Listing of results directory ***
[2025-11-22 03:45:16] total 1328940
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 19:06 pilot3.tar.gz
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 19:19 queuedata.json
[2025-11-22 03:45:16] -rwx------. 1 boincer umatlas     36292 Nov 20 19:20 runpilot2-wrapper.sh
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas       100 Nov 21 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 03:45:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 08:23 run_atlas
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas       105 Nov 21 08:23 job.xml
[2025-11-22 03:45:16] -rw-r--r--. 2 boincer umatlas 409443495 Nov 21 08:23 EVNT.47493127._002044.pool.root.1
[2025-11-22 03:45:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:23 start_atlas.sh
[2025-11-22 03:45:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 08:23 shared
[2025-11-22 03:45:16] -rw-r--r--. 2 boincer umatlas    590104 Nov 21 08:23 input.tar.gz
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas         0 Nov 21 08:23 boinc_lockfile
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 08:23 pandaJob.out
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas        57 Nov 21 08:23 setup.sh.local
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas    989817 Nov 21 08:23 agis_schedconf.cvmfs.json
[2025-11-22 03:45:16] drwx------. 5 boincer umatlas      4096 Nov 21 08:23 pilot3
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas       533 Nov 22 00:14 boinc_task_state.xml
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas 928123907 Nov 22 00:47 HITS.47533967._000153.pool.root.1
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas      1068 Nov 22 00:48 memory_monitor_summary.json
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas   1526164 Nov 22 00:48 agis_ddmendpoints.agis.ALL.json
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas   2306629 Nov 22 00:48 log.47533967._000153.job.log.tgz.1
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas      7963 Nov 22 00:49 heartbeat.json
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas        95 Nov 22 00:50 pilot_heartbeat.json
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas       823 Nov 22 00:50 pilotlog.txt
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas   7366333 Nov 22 00:50 log.47533967._000153.job.log.1
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas       353 Nov 22 00:50 output.list
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas       620 Nov 22 00:50 runtime_log
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas   9697280 Nov 22 00:50 result.tar.gz
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas       666 Nov 22 00:50 SJcLDmR4Tg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNjIKDmKOLDFn.diag
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas      9355 Nov 22 00:50 runtime_log.err
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas      6844 Nov 22 03:45 init_data.xml
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas        29 Nov 22 03:45 wrapper_checkpoint.txt
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 03:45 boinc_mmap_file
[2025-11-22 03:45:16] -rw-r--r--. 1 boincer umatlas     21874 Nov 22 03:45 stderr.txt
[2025-11-22 03:45:16] HITS file was successfully produced:
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas 928123907 Nov 22 00:47 shared/HITS.pool.root.1
[2025-11-22 03:45:16]  *** Contents of shared directory: ***
[2025-11-22 03:45:16] total 1316292
[2025-11-22 03:45:16] -rw-r--r--. 2 boincer umatlas 409443495 Nov 21 08:23 ATLAS.root_0
[2025-11-22 03:45:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:23 start_atlas.sh
[2025-11-22 03:45:16] -rw-r--r--. 2 boincer umatlas    590104 Nov 21 08:23 input.tar.gz
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas 928123907 Nov 22 00:47 HITS.pool.root.1
[2025-11-22 03:45:16] -rw-------. 1 boincer umatlas   9697280 Nov 22 00:50 result.tar.gz
03:45:18 (1436789): run_atlas exited; CPU time 234853.572437
03:45:18 (1436789): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN