Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:29:02 (1827186): wrapper (7.7.26015): starting
04:29:02 (1827186): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 04:29:02] Arguments: --nthreads 8
[2025-11-21 04:29:02] Threads: 8
[2025-11-21 04:29:02] Checking for CVMFS
[2025-11-21 04:29:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 04:29:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 04:29:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 04:29:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 04:29:02] 2.11.3.0 1070807 21185 221676 153124 2 739 41653526 45568001 12292 130560 0 152011722 99.822 76048199 17752 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-21 04:29:02] CVMFS is ok
[2025-11-21 04:29:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 04:29:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 04:29:02] Further information can be found at the LHC@home message board.
[2025-11-21 04:29:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 04:29:02] Checking for apptainer binary...
[2025-11-21 04:29:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 04:29:02] Running /usr/bin/apptainer --version
[2025-11-21 04:29:02] apptainer version 1.4.1-1.el9
[2025-11-21 04:29:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 04:29:03] wns0007.triumf.lcg
[2025-11-21 04:29:03] apptainer works
[2025-11-21 04:29:03] Set ATHENA_PROC_NUMBER=8
[2025-11-21 04:29:03] Set ATHENA_CORE_NUMBER=8
[2025-11-21 04:29:03] Starting ATLAS job with PandaID=6894267993
[2025-11-21 04:29:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 04:38:25]  *** The last 200 lines of the pilot log: ***
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 04:38:25] 2025-11-21 12:37:44,232 | WARNING  | wrong length of table data, x=[1763728201.0, 1763728262.0, 1763728323.0, 1763728384.0, 1763728445.0, 1763728506.0], y=[1502.0, 607317.0, 665877.0, 848389.0, 356392
[2025-11-21 04:38:25] 2025-11-21 12:37:44,232 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | ..............................
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . Timing measurements:
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . get job = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . initial setup = 3 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . payload setup = 13 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . stage-in = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . payload execution = 342 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . stage-out = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . log creation = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | ..............................
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 04:38:25] 2025-11-21 12:37:44,234 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894267993/pilotlog.txt
[2025-11-21 04:38:25] 2025-11-21 12:37:44,245 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 04:38:25] - Log from pilotlog.txt -
[2025-11-21 04:38:25] 2025-11-21 12:37:44,230 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894267993/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | INFO     | extracted standard info from prmon json
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 04:38:25] 2025-11-21 12:37:44,232 | WARNING  | wrong length of table data, x=[1763728201.0, 1763728262.0, 1763728323.0, 1763728384.0, 1763728445.0, 1763728506.0], y=[1502.0, 607317.0, 665877.0, 848389.0, 356392
[2025-11-21 04:38:25] 2025-11-21 12:37:44,232 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | ..............................
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . Timing measurements:
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . get job = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . initial setup = 3 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . payload setup = 13 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . stage-in = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . payload execution = 342 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . stage-out = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . log creation = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | ..............................
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 04:38:25] 2025-11-21 12:37:44,234 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894267993/pilotlog.txt
[2025-11-21 04:38:25] 2025-11-21 12:37:44,246 | WARNING  | 
[2025-11-21 04:38:25] [begin log extracts]
[2025-11-21 04:38:25] - Log from pilotlog.txt -
[2025-11-21 04:38:25] 2025-11-21 12:37:44,230 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894267993/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | INFO     | extracted standard info from prmon json
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 04:38:25] 2025-11-21 12:37:44,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 04:38:25] 2025-11-21 12:37:44,232 | WARNING  | wrong length of table data, x=[1763728201.0, 1763728262.0, 1763728323.0, 1763728384.0, 1763728445.0, 1763728506.0], y=[1502.0, 607317.0, 665877.0, 848389.0, 356392
[2025-11-21 04:38:25] 2025-11-21 12:37:44,232 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | ..............................
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . Timing measurements:
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . get job = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . initial setup = 3 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . payload setup = 13 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . stage-in = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . payload execution = 342 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . stage-out = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | . log creation = 0 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | ..............................
[2025-11-21 04:38:25] 2025-11-21 12:37:44,233 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 04:38:25] 2025-11-21 12:37:44,234 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894267993/pilotlog.txt
[2025-11-21 04:38:25] [end log extracts]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,246 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-21 04:38:25] 2025-11-21 12:37:44,247 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 04:38:25] 2025-11-21 12:37:44,319 | INFO     | 
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | job summary report
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | --------------------------------------------------
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | PanDA job id: 6894267993
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | task id: 47533967
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 04:35:29,850 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | pilot state: failed 
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | transexitcode: 65
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | exeerrorcode: 65
[2025-11-21 04:38:25] 2025-11-21 12:37:44,320 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | exitcode: 65
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | cpuconsumptiontime: 57 s
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | nevents: 0
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | neventsw: 0
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | pid: 1844583
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | pgrp: 1844583
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | corecount: 8
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | event service: False
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | sizes: {0: 2298798, 6: 2299060, 11: 2299088, 356: 2324589, 358: 2328879, 361: 2328935, 485: 2329257}
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | --------------------------------------------------
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | 
[2025-11-21 04:38:25] 2025-11-21 12:37:44,321 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 04:38:25] 2025-11-21 12:37:44,337 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,337 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,337 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 04:38:25] 2025-11-21 12:37:44,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,339 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 04:38:25] 2025-11-21 12:37:44,339 | INFO     | job 6894267993 has completed (purged errors)
[2025-11-21 04:38:25] 2025-11-21 12:37:44,339 | INFO     | overall cleanup function is called
[2025-11-21 04:38:25] 2025-11-21 12:37:45,347 | INFO     | --- collectZombieJob: --- 10, [1844583]
[2025-11-21 04:38:25] 2025-11-21 12:37:45,347 | INFO     | zombie collector waiting for pid 1844583
[2025-11-21 04:38:25] 2025-11-21 12:37:45,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 04:38:25] 2025-11-21 12:37:45,347 | INFO     | collected zombie processes
[2025-11-21 04:38:25] 2025-11-21 12:37:45,347 | INFO     | will attempt to kill all subprocesses of pid=1844583
[2025-11-21 04:38:25] 2025-11-21 12:37:45,918 | INFO     | process IDs to be killed: [1844583] (in reverse order)
[2025-11-21 04:38:25] 2025-11-21 12:37:45,971 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 04:38:25] 2025-11-21 12:37:45,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 04:38:25] 2025-11-21 12:37:45,978 | INFO     | did not find any defunct processes belonging to 1844583
[2025-11-21 04:38:25] 2025-11-21 12:37:45,984 | INFO     | did not find any defunct processes belonging to 1844583
[2025-11-21 04:38:25] 2025-11-21 12:37:45,985 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 04:38:25] 2025-11-21 12:37:45,985 | INFO     | ready for new job
[2025-11-21 04:38:25] 2025-11-21 12:37:45,985 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 04:38:25] 2025-11-21 12:37:45,986 | INFO     | ***************************************
[2025-11-21 04:38:25] 2025-11-21 12:37:45,987 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 04:38:25] 2025-11-21 12:37:45,987 | INFO     | ***************************************
[2025-11-21 04:38:25] 2025-11-21 12:37:45,987 | INFO     | 
[2025-11-21 04:38:25] 2025-11-21 12:37:45,988 | INFO     | architecture information:
[2025-11-21 04:38:25] 2025-11-21 12:37:45,999 | INFO     | executing command: cat /etc/os-release
[2025-11-21 04:38:25] 2025-11-21 12:37:46,039 | INFO     | cat /etc/os-release:
[2025-11-21 04:38:25] NAME="CentOS Linux"
[2025-11-21 04:38:25] VERSION="7 (Core)"
[2025-11-21 04:38:25] ID="centos"
[2025-11-21 04:38:25] ID_LIKE="rhel fedora"
[2025-11-21 04:38:25] VERSION_ID="7"
[2025-11-21 04:38:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 04:38:25] ANSI_COLOR="0;31"
[2025-11-21 04:38:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 04:38:25] HOME_URL="https://www.centos.org/"
[2025-11-21 04:38:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 04:38:25] 
[2025-11-21 04:38:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 04:38:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 04:38:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 04:38:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 04:38:25] 
[2025-11-21 04:38:25] 2025-11-21 12:37:46,039 | INFO     | ***************************************
[2025-11-21 04:38:25] 2025-11-21 12:37:46,543 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 04:38:25] 2025-11-21 12:37:46,610 | INFO     | sufficient remaining disk space (1253129060352 B)
[2025-11-21 04:38:25] 2025-11-21 12:37:46,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 04:38:25] 2025-11-21 12:37:46,614 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 04:38:25] 2025-11-21 12:37:46,614 | INFO     | update_server=False
[2025-11-21 04:38:25] 2025-11-21 12:37:46,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 04:38:25] 2025-11-21 12:37:46,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 04:38:25] 2025-11-21 12:37:46,619 | INFO     | aborting loop
[2025-11-21 04:38:25] 2025-11-21 12:37:46,686 | INFO     | all data control threads have been joined
[2025-11-21 04:38:25] 2025-11-21 12:37:47,166 | INFO     | all payload control threads have been joined
[2025-11-21 04:38:25] 2025-11-21 12:37:47,278 | INFO     | all job control threads have been joined
[2025-11-21 04:38:25] 2025-11-21 12:37:47,620 | INFO     | [job] retrieve thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:47,637 | INFO     | [job] job monitor thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:47,681 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:47,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:47,700 | INFO     | [data] control thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:48,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 04:38:25] 2025-11-21 12:37:48,172 | INFO     | [payload] control thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:48,284 | INFO     | [job] control thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:48,507 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:48,559 | INFO     | [payload] failed_post thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:48,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 04:38:25] 2025-11-21 12:37:48,598 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:48,623 | INFO     | [payload] validate_post thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:48,662 | INFO     | [job] validate thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:48,765 | INFO     | [data] copytool_in thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:49,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 04:38:25] 2025-11-21 12:37:50,128 | INFO     | [data] copytool_out thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:50,346 | INFO     | [job] queue monitor thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:37:52,609 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 04:38:25] 2025-11-21 12:38:17,383 | INFO     | PID=1832422 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 04:38:25] 2025-11-21 12:38:17,384 | INFO     | .. there are 19 such processes running
[2025-11-21 04:38:25] 2025-11-21 12:38:17,384 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 04:38:25] 2025-11-21 12:38:17,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 04:38:25] 2025-11-21 12:38:17,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 04:38:25] 2025-11-21 12:38:19,227 | INFO     | [monitor] cgroup control has ended
[2025-11-21 04:38:25] 2025-11-21 12:38:19,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371495135040)>', '<ExcThread(monitor, started 140371099100928)>']
[2025-11-21 04:38:25] 2025-11-21 12:38:20,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 04:38:25] 2025-11-21 12:38:20,402 | INFO     | [monitor] control thread has ended
[2025-11-21 04:38:25] 2025-11-21 12:38:24,476 | INFO     | all workflow threads have been joined
[2025-11-21 04:38:25] 2025-11-21 12:38:24,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 04:38:25] 2025-11-21 12:38:24,476 | INFO     | traces error code: 0
[2025-11-21 04:38:25] 2025-11-21 12:38:24,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 04:38:25] 2025-11-21 12:38:24,913 [wrapper] ==== pilot stdout END ====
[2025-11-21 04:38:25] 2025-11-21 12:38:24,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 04:38:25] 2025-11-21 12:38:24,916 [wrapper] pilotpid: 1832422
[2025-11-21 04:38:25] 2025-11-21 12:38:24,918 [wrapper] Pilot exit status: 0
[2025-11-21 04:38:25] 2025-11-21 12:38:24,927 [wrapper] pandaids: 6894267993
[2025-11-21 04:38:25] 2025-11-21 12:38:24,960 [wrapper] cleanup supervisor_pilot 1832433 1832424
[2025-11-21 04:38:25] 2025-11-21 12:38:24,962 [wrapper] Test setup, not cleaning
[2025-11-21 04:38:25] 2025-11-21 12:38:24,964 [wrapper] apfmon messages muted
[2025-11-21 04:38:25] 2025-11-21 12:38:24,966 [wrapper] ==== wrapper stdout END ====
[2025-11-21 04:38:25] 2025-11-21 12:38:24,968 [wrapper] ==== wrapper stderr END ====
[2025-11-21 04:38:25]  *** Error codes and diagnostics ***
[2025-11-21 04:38:25]     "exeErrorCode": 65,
[2025-11-21 04:38:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-21 04:38:25]     "pilotErrorCode": 1305,
[2025-11-21 04:38:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-21 04:38:25]  *** Listing of results directory ***
[2025-11-21 04:38:25] total 404444
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc    576529 Nov 20 21:09 pilot3.tar.gz
[2025-11-21 04:38:25] -rwx------. 1 boinc boinc     36292 Nov 20 21:37 runpilot2-wrapper.sh
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc      5112 Nov 20 21:37 queuedata.json
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc       100 Nov 21 04:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 04:38:25] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 04:29 run_atlas
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc       105 Nov 21 04:29 job.xml
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc      6444 Nov 21 04:29 init_data.xml
[2025-11-21 04:38:25] -rw-r--r--. 2 boinc boinc 409866297 Nov 21 04:29 EVNT.47493127._002260.pool.root.1
[2025-11-21 04:38:25] -rw-r--r--. 2 boinc boinc     15847 Nov 21 04:29 start_atlas.sh
[2025-11-21 04:38:25] drwxrwx--x. 2 boinc boinc      4096 Nov 21 04:29 shared
[2025-11-21 04:38:25] -rw-r--r--. 2 boinc boinc    590105 Nov 21 04:29 input.tar.gz
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc         0 Nov 21 04:29 boinc_lockfile
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc      2783 Nov 21 04:29 pandaJob.out
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc    989817 Nov 21 04:29 agis_schedconf.cvmfs.json
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc   1526164 Nov 21 04:29 agis_ddmendpoints.agis.ALL.json
[2025-11-21 04:38:25] drwx------. 5 boinc boinc      4096 Nov 21 04:29 pilot3
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc       524 Nov 21 04:35 boinc_task_state.xml
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc      1003 Nov 21 04:35 memory_monitor_summary.json
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc     51524 Nov 21 04:35 log.47533967._002311.job.log.tgz.1
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc        95 Nov 21 04:37 pilot_heartbeat.json
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc     10330 Nov 21 04:37 heartbeat.json
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc      8192 Nov 21 04:38 boinc_mmap_file
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc        23 Nov 21 04:38 wrapper_checkpoint.txt
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc      4823 Nov 21 04:38 pilotlog.txt
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc    129326 Nov 21 04:38 log.47533967._002311.job.log.1
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc       186 Nov 21 04:38 output.list
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc       620 Nov 21 04:38 runtime_log
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc    204800 Nov 21 04:38 result.tar.gz
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc      8634 Nov 21 04:38 runtime_log.err
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc       647 Nov 21 04:38 ahMKDmJ1Yg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuNHKDmVfa9km.diag
[2025-11-21 04:38:25] -rw-r--r--. 1 boinc boinc     22630 Nov 21 04:38 stderr.txt
[2025-11-21 04:38:25] No HITS result produced
[2025-11-21 04:38:25]  *** Contents of shared directory: ***
[2025-11-21 04:38:25] total 401064
[2025-11-21 04:38:25] -rw-r--r--. 2 boinc boinc 409866297 Nov 21 04:29 ATLAS.root_0
[2025-11-21 04:38:25] -rw-r--r--. 2 boinc boinc     15847 Nov 21 04:29 start_atlas.sh
[2025-11-21 04:38:25] -rw-r--r--. 2 boinc boinc    590105 Nov 21 04:29 input.tar.gz
[2025-11-21 04:38:25] -rw-------. 1 boinc boinc    204800 Nov 21 04:38 result.tar.gz
04:38:26 (1827186): run_atlas exited; CPU time 62.032614
04:38:26 (1827186): called boinc_finish(0)

</stderr_txt>
]]>

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