Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:32:22 (725617): wrapper (7.7.26015): starting
14:32:22 (725617): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 14:32:22] Arguments: --nthreads 4
[2025-11-21 14:32:22] Threads: 4
[2025-11-21 14:32:22] Checking for CVMFS
[2025-11-21 14:32:23] No cvmfs_config command found, will try listing directly
[2025-11-21 14:32:23] CVMFS is ok
[2025-11-21 14:32:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 14:32:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 14:32:23] Further information can be found at the LHC@home message board.
[2025-11-21 14:32:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 14:32:23] Checking for apptainer binary...
[2025-11-21 14:32:23] which: no apptainer in ((null))
[2025-11-21 14:32:23] apptainer is not installed, using version from CVMFS
[2025-11-21 14:32:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 14:32:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-11-21 14:32:24] apptainer works
[2025-11-21 14:32:24] Set ATHENA_PROC_NUMBER=4
[2025-11-21 14:32:24] Set ATHENA_CORE_NUMBER=4
[2025-11-21 14:32:24] Starting ATLAS job with PandaID=6893887263
[2025-11-21 14:32:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 08:35:00]  *** The last 200 lines of the pilot log: ***
[2025-11-22 08:35:00] 2025-11-22 07:25:04,200 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 08:35:00] 2025-11-22 07:25:04,222 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2720.3481796874994
[2025-11-22 08:35:00] 2025-11-22 07:25:04,243 | INFO     | using path: /scratch/boinc/var/slot104/slots/1/PanDA_Pilot-6893887263/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,244 | INFO     | extracted standard info from prmon json
[2025-11-22 08:35:00] 2025-11-22 07:25:04,244 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 08:35:00] 2025-11-22 07:25:04,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 08:35:00] 2025-11-22 07:25:04,266 | INFO     | fitting pss+swap vs Time
[2025-11-22 08:35:00] 2025-11-22 07:25:04,267 | INFO     | sum of square deviations: 362038720439.08984
[2025-11-22 08:35:00] 2025-11-22 07:25:04,294 | INFO     | sum of deviations: 617259050539.2568
[2025-11-22 08:35:00] 2025-11-22 07:25:04,295 | INFO     | mean x: 1763764161.194682
[2025-11-22 08:35:00] 2025-11-22 07:25:04,295 | INFO     | mean y: 2312090.9743589745
[2025-11-22 08:35:00] 2025-11-22 07:25:04,295 | INFO     | intersect: -3004823140.84227
[2025-11-22 08:35:00] 2025-11-22 07:25:04,296 | INFO     | chi2: 4.111790899249777
[2025-11-22 08:35:00] 2025-11-22 07:25:04,297 | INFO     | sum of square deviations: 356905886723.8998
[2025-11-22 08:35:00] 2025-11-22 07:25:04,324 | INFO     | sum of deviations: 836740799881.2869
[2025-11-22 08:35:00] 2025-11-22 07:25:04,324 | INFO     | mean x: 1763764008.6956108
[2025-11-22 08:35:00] 2025-11-22 07:25:04,324 | INFO     | mean y: 2318609.6059160307
[2025-11-22 08:35:00] 2025-11-22 07:25:04,324 | INFO     | intersect: -4132702308.610181
[2025-11-22 08:35:00] 2025-11-22 07:25:04,325 | INFO     | chi2: 2.116970098788146
[2025-11-22 08:35:00] 2025-11-22 07:25:04,325 | INFO     | current chi2=2.116970098788146 (change=48.514646034787404 %)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,326 | INFO     | sum of square deviations: 351821798108.70984
[2025-11-22 08:35:00] 2025-11-22 07:25:04,351 | INFO     | sum of deviations: 884558923053.0887
[2025-11-22 08:35:00] 2025-11-22 07:25:04,351 | INFO     | mean x: 1763763856.1965485
[2025-11-22 08:35:00] 2025-11-22 07:25:04,351 | INFO     | mean y: 2320040.85810163
[2025-11-22 08:35:00] 2025-11-22 07:25:04,351 | INFO     | intersect: -4432177950.8641405
[2025-11-22 08:35:00] 2025-11-22 07:25:04,352 | INFO     | chi2: 1.9463536135504074
[2025-11-22 08:35:00] 2025-11-22 07:25:04,353 | INFO     | current chi2=1.9463536135504074 (change=8.059465995075108 %)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,353 | INFO     | right removable region: 1042
[2025-11-22 08:35:00] 2025-11-22 07:25:04,354 | INFO     | sum of square deviations: 356905761673.8999
[2025-11-22 08:35:00] 2025-11-22 07:25:04,384 | INFO     | sum of deviations: 422060792807.8206
[2025-11-22 08:35:00] 2025-11-22 07:25:04,384 | INFO     | mean x: 1763764313.6956108
[2025-11-22 08:35:00] 2025-11-22 07:25:04,384 | INFO     | mean y: 2317881.8740458013
[2025-11-22 08:35:00] 2025-11-22 07:25:04,384 | INFO     | intersect: -2083430919.3590205
[2025-11-22 08:35:00] 2025-11-22 07:25:04,385 | INFO     | chi2: 2.329477021955464
[2025-11-22 08:35:00] 2025-11-22 07:25:04,386 | INFO     | current chi2=2.329477021955464 (change=43.34641330179284 %)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,387 | INFO     | sum of square deviations: 351821739790.88196
[2025-11-22 08:35:00] 2025-11-22 07:25:04,414 | INFO     | sum of deviations: 397850024980.6625
[2025-11-22 08:35:00] 2025-11-22 07:25:04,414 | INFO     | mean x: 1763764466.1936722
[2025-11-22 08:35:00] 2025-11-22 07:25:04,414 | INFO     | mean y: 2318607.615532119
[2025-11-22 08:35:00] 2025-11-22 07:25:04,414 | INFO     | intersect: -1992196391.236575
[2025-11-22 08:35:00] 2025-11-22 07:25:04,416 | INFO     | chi2: 2.317345775979711
[2025-11-22 08:35:00] 2025-11-22 07:25:04,416 | INFO     | current chi2=2.317345775979711 (change=0.5207712229575578 %)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,416 | INFO     | left removable region: 20
[2025-11-22 08:35:00] 2025-11-22 07:25:04,417 | INFO     | sum of square deviations: 330995681139.5264
[2025-11-22 08:35:00] 2025-11-22 07:25:04,445 | INFO     | sum of deviations: 638776843315.8024
[2025-11-22 08:35:00] 2025-11-22 07:25:04,446 | INFO     | mean x: 1763764435.6927593
[2025-11-22 08:35:00] 2025-11-22 07:25:04,446 | INFO     | mean y: 2327373.0949119376
[2025-11-22 08:35:00] 2025-11-22 07:25:04,446 | INFO     | intersect: -3401499150.2776833
[2025-11-22 08:35:00] 2025-11-22 07:25:04,447 | INFO     | chi2: 0.14150222521202932
[2025-11-22 08:35:00] 2025-11-22 07:25:04,448 | INFO     | current memory leak: 1.93 B/s (using 1022 data points, chi2=0.14)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,453 | INFO     | could have reported an average CPU frequency of 2697 MHz (39 samples)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | ..............................
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | . Timing measurements:
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | . get job = 0 s
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | . initial setup = 1 s
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | . payload setup = 24 s
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | . stage-in = 0 s
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | . payload execution = 64235 s
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | . stage-out = 2 s
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | . log creation = 0 s
[2025-11-22 08:35:00] 2025-11-22 07:25:04,454 | INFO     | ..............................
[2025-11-22 08:35:00] 2025-11-22 07:25:04,561 | INFO     | 
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | job summary report
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | --------------------------------------------------
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | PanDA job id: 6893887263
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | task id: 47523449
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | errors: (none)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | pilot state: finished 
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | transexitcode: 0
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | exeerrorcode: 0
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | exeerrordiag: 
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | exitcode: 0
[2025-11-22 08:35:00] 2025-11-22 07:25:04,562 | INFO     | exitmsg: OK
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | cpuconsumptiontime: 236850 s
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | nevents: 1000
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | neventsw: 0
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | pid: 744271
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | pgrp: 744271
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | corecount: 4
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | event service: False
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | sizes: {0: 2298819, 11: 2298819, 14: 2299109, 22: 2299137, 64263: 2355257, 64264: 2355256, 64267: 2364458, 64269: 2364514, 64279: 2364760}
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | --------------------------------------------------
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | 
[2025-11-22 08:35:00] 2025-11-22 07:25:04,563 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/1
[2025-11-22 08:35:00] 2025-11-22 07:25:04,600 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,600 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,601 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,602 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 08:35:00] 2025-11-22 07:25:04,602 | INFO     | job 6893887263 has completed (purged errors)
[2025-11-22 08:35:00] 2025-11-22 07:25:04,602 | INFO     | overall cleanup function is called
[2025-11-22 08:35:00] 2025-11-22 07:25:05,621 | INFO     | --- collectZombieJob: --- 10, [744271]
[2025-11-22 08:35:00] 2025-11-22 07:25:05,622 | INFO     | zombie collector waiting for pid 744271
[2025-11-22 08:35:00] 2025-11-22 07:25:05,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 08:35:00] 2025-11-22 07:25:05,622 | INFO     | collected zombie processes
[2025-11-22 08:35:00] 2025-11-22 07:25:05,622 | INFO     | will attempt to kill all subprocesses of pid=744271
[2025-11-22 08:35:00] 2025-11-22 07:25:06,476 | INFO     | process IDs to be killed: [744271] (in reverse order)
[2025-11-22 08:35:00] 2025-11-22 07:25:06,759 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 08:35:00] 2025-11-22 07:25:06,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 08:35:00] 2025-11-22 07:25:06,796 | INFO     | did not find any defunct processes belonging to 744271
[2025-11-22 08:35:00] 2025-11-22 07:25:06,829 | INFO     | did not find any defunct processes belonging to 744271
[2025-11-22 08:35:00] 2025-11-22 07:25:06,831 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 08:35:00] 2025-11-22 07:25:06,831 | INFO     | ready for new job
[2025-11-22 08:35:00] 2025-11-22 07:25:06,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 08:35:00] 2025-11-22 07:25:06,838 | INFO     | ***************************************
[2025-11-22 08:35:00] 2025-11-22 07:25:06,838 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 08:35:00] 2025-11-22 07:25:06,838 | INFO     | ***************************************
[2025-11-22 08:35:00] 2025-11-22 07:25:06,838 | INFO     | 
[2025-11-22 08:35:00] 2025-11-22 07:25:06,846 | INFO     | architecture information:
[2025-11-22 08:35:00] 2025-11-22 07:25:06,847 | INFO     | executing command: cat /etc/os-release
[2025-11-22 08:35:00] 2025-11-22 07:25:06,870 | INFO     | cat /etc/os-release:
[2025-11-22 08:35:00] NAME="CentOS Linux"
[2025-11-22 08:35:00] VERSION="7 (Core)"
[2025-11-22 08:35:00] ID="centos"
[2025-11-22 08:35:00] ID_LIKE="rhel fedora"
[2025-11-22 08:35:00] VERSION_ID="7"
[2025-11-22 08:35:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 08:35:00] ANSI_COLOR="0;31"
[2025-11-22 08:35:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 08:35:00] HOME_URL="https://www.centos.org/"
[2025-11-22 08:35:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 08:35:00] 
[2025-11-22 08:35:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 08:35:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 08:35:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 08:35:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 08:35:00] 
[2025-11-22 08:35:00] 2025-11-22 07:25:06,871 | INFO     | ***************************************
[2025-11-22 08:35:00] 2025-11-22 07:25:07,374 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/1
[2025-11-22 08:35:00] 2025-11-22 07:25:07,394 | INFO     | sufficient remaining disk space (3291329069056 B)
[2025-11-22 08:35:00] 2025-11-22 07:25:07,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 08:35:00] 2025-11-22 07:25:07,395 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 08:35:00] 2025-11-22 07:25:07,395 | INFO     | update_server=False
[2025-11-22 08:35:00] 2025-11-22 07:25:07,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 08:35:00] 2025-11-22 07:25:07,397 | INFO     | all data control threads have been joined
[2025-11-22 08:35:00] 2025-11-22 07:25:07,854 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 08:35:00] 2025-11-22 07:25:07,855 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 08:35:00] 2025-11-22 07:25:07,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:35:00] 2025-11-22 07:25:07,855 | INFO     | will abort loop
[2025-11-22 08:35:00] 2025-11-22 07:25:07,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 08:35:00] 2025-11-22 07:25:08,166 | INFO     | all job control threads have been joined
[2025-11-22 08:35:00] 2025-11-22 07:25:08,400 | INFO     | [job] retrieve thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:08,403 | INFO     | [data] control thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:08,736 | INFO     | all payload control threads have been joined
[2025-11-22 08:35:00] 2025-11-22 07:25:08,811 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:08,860 | INFO     | [data] copytool_in thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:08,861 | INFO     | [job] job monitor thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:09,172 | INFO     | [job] control thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:09,178 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:09,317 | INFO     | [job] validate thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:09,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 08:35:00] 2025-11-22 07:25:09,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:35:00] 2025-11-22 07:25:09,589 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:09,741 | INFO     | [payload] control thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:09,744 | INFO     | [payload] failed_post thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:09,862 | INFO     | [payload] validate_post thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:09,964 | INFO     | [data] copytool_out thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:10,578 | INFO     | [job] queue monitor thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:13,395 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:18,160 | INFO     | job.realtimelogging is not enabled
[2025-11-22 08:35:00] 2025-11-22 07:25:19,165 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 08:35:00] 2025-11-22 07:25:36,931 | INFO     | PID=734091 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 08:35:00] 2025-11-22 07:25:36,932 | INFO     | .. there are 7 such processes running
[2025-11-22 08:35:00] 2025-11-22 07:25:36,932 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 08:35:00] 2025-11-22 07:25:36,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 08:35:00] 2025-11-22 07:25:36,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 08:35:00] 2025-11-22 07:25:52,773 | INFO     | [monitor] cgroup control has ended
[2025-11-22 08:35:00] 2025-11-22 07:25:53,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22577955563328)>', '<ExcThread(monitor, started 22577718200064)>']
[2025-11-22 08:35:00] 2025-11-22 07:25:54,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 08:35:00] 2025-11-22 07:25:54,017 | INFO     | [monitor] control thread has ended
[2025-11-22 08:35:00] 2025-11-22 07:25:58,492 | INFO     | all workflow threads have been joined
[2025-11-22 08:35:00] 2025-11-22 07:25:58,493 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 08:35:00] 2025-11-22 07:25:58,493 | INFO     | traces error code: 0
[2025-11-22 08:35:00] 2025-11-22 07:25:58,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 08:35:00] 2025-11-22 07:25:58,640 [wrapper] ==== pilot stdout END ====
[2025-11-22 08:35:00] 2025-11-22 07:25:58,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 08:35:00] 2025-11-22 07:25:58,648 [wrapper] pilotpid: 734091
[2025-11-22 08:35:00] 2025-11-22 07:25:58,665 [wrapper] Pilot exit status: 0
[2025-11-22 08:35:00] 2025-11-22 07:25:58,692 [wrapper] pandaids: 6893887263
[2025-11-22 08:35:00] 2025-11-22 07:25:58,881 [wrapper] cleanup supervisor_pilot 2337688 734092
[2025-11-22 08:35:00] 2025-11-22 07:25:58,885 [wrapper] Test setup, not cleaning
[2025-11-22 08:35:00] 2025-11-22 07:25:58,889 [wrapper] apfmon messages muted
[2025-11-22 08:35:00] 2025-11-22 07:25:58,896 [wrapper] ==== wrapper stdout END ====
[2025-11-22 08:35:00] 2025-11-22 07:25:58,901 [wrapper] ==== wrapper stderr END ====
[2025-11-22 08:35:00]  *** Error codes and diagnostics ***
[2025-11-22 08:35:00]     "exeErrorCode": 0,
[2025-11-22 08:35:00]     "exeErrorDiag": "",
[2025-11-22 08:35:00]     "pilotErrorCode": 0,
[2025-11-22 08:35:00]     "pilotErrorDiag": "",
[2025-11-22 08:35:00]  *** Listing of results directory ***
[2025-11-22 08:35:00] total 1331320
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc    576529 Nov 21 00:11 pilot3.tar.gz
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc      5112 Nov 21 00:25 queuedata.json
[2025-11-22 08:35:00] -rwx------ 1 boinc boinc     36292 Nov 21 00:27 runpilot2-wrapper.sh
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc       100 Nov 21 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 08:35:00] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 13:21 run_atlas
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc       105 Nov 21 13:21 job.xml
[2025-11-22 08:35:00] -rw-r--r-- 2 boinc boinc 409760482 Nov 21 14:32 EVNT.47493127._000976.pool.root.1
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc      6686 Nov 21 14:32 init_data.xml
[2025-11-22 08:35:00] -rw-r--r-- 2 boinc boinc    590098 Nov 21 14:32 input.tar.gz
[2025-11-22 08:35:00] -rw-r--r-- 2 boinc boinc     15847 Nov 21 14:32 start_atlas.sh
[2025-11-22 08:35:00] drwxrwx--x 2 boinc boinc      4096 Nov 21 14:32 shared
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc         0 Nov 21 14:32 boinc_lockfile
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc      2786 Nov 21 14:32 pandaJob.out
[2025-11-22 08:35:00] -rw------- 1 boinc boinc    989817 Nov 21 14:33 agis_schedconf.cvmfs.json
[2025-11-22 08:35:00] drwx------ 5 boinc boinc      4096 Nov 21 14:33 pilot3
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc       532 Nov 22 08:15 boinc_task_state.xml
[2025-11-22 08:35:00] -rw------- 1 boinc boinc 928838664 Nov 22 08:24 HITS.47523449._009752.pool.root.1
[2025-11-22 08:35:00] -rw------- 1 boinc boinc        95 Nov 22 08:24 pilot_heartbeat.json
[2025-11-22 08:35:00] -rw------- 1 boinc boinc      1039 Nov 22 08:24 memory_monitor_summary.json
[2025-11-22 08:35:00] -rw------- 1 boinc boinc   1526164 Nov 22 08:24 agis_ddmendpoints.agis.ALL.json
[2025-11-22 08:35:00] -rw------- 1 boinc boinc   1754835 Nov 22 08:24 log.47523449._009752.job.log.tgz.1
[2025-11-22 08:35:00] -rw------- 1 boinc boinc      8595 Nov 22 08:25 heartbeat.json
[2025-11-22 08:35:00] -rw------- 1 boinc boinc      5093 Nov 22 08:25 pilotlog.txt
[2025-11-22 08:35:00] -rw------- 1 boinc boinc   8617429 Nov 22 08:25 log.47523449._009752.job.log.1
[2025-11-22 08:35:00] -rw------- 1 boinc boinc       353 Nov 22 08:25 output.list
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc       620 Nov 22 08:25 runtime_log
[2025-11-22 08:35:00] -rw------- 1 boinc boinc  10393600 Nov 22 08:25 result.tar.gz
[2025-11-22 08:35:00] -rw------- 1 boinc boinc       671 Nov 22 08:25 vslLDmTETg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkfIKDmFBQKdn.diag
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc      9223 Nov 22 08:25 runtime_log.err
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc        28 Nov 22 08:34 wrapper_checkpoint.txt
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc      8192 Nov 22 08:34 boinc_mmap_file
[2025-11-22 08:35:00] -rw-r--r-- 1 boinc boinc     20775 Nov 22 08:35 stderr.txt
[2025-11-22 08:35:00] HITS file was successfully produced:
[2025-11-22 08:35:00] -rw------- 1 boinc boinc 928838664 Nov 22 08:24 shared/HITS.pool.root.1
[2025-11-22 08:35:00]  *** Contents of shared directory: ***
[2025-11-22 08:35:00] total 1317988
[2025-11-22 08:35:00] -rw-r--r-- 2 boinc boinc 409760482 Nov 21 14:32 ATLAS.root_0
[2025-11-22 08:35:00] -rw-r--r-- 2 boinc boinc    590098 Nov 21 14:32 input.tar.gz
[2025-11-22 08:35:00] -rw-r--r-- 2 boinc boinc     15847 Nov 21 14:32 start_atlas.sh
[2025-11-22 08:35:00] -rw------- 1 boinc boinc 928838664 Nov 22 08:24 HITS.pool.root.1
[2025-11-22 08:35:00] -rw------- 1 boinc boinc  10393600 Nov 22 08:25 result.tar.gz
08:35:02 (725617): run_atlas exited; CPU time 239770.157271
08:35:02 (725617): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN