Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:34:44 (3030449): wrapper (7.7.26015): starting
10:34:44 (3030449): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 10:34:44] Arguments: --nthreads 4
[2025-11-24 10:34:44] Threads: 4
[2025-11-24 10:34:44] Checking for CVMFS
[2025-11-24 10:34:44] No cvmfs_config command found, will try listing directly
[2025-11-24 10:34:44] CVMFS is ok
[2025-11-24 10:34:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:34:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:34:44] Further information can be found at the LHC@home message board.
[2025-11-24 10:34:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:34:44] Checking for apptainer binary...
[2025-11-24 10:34:44] which: no apptainer in ((null))
[2025-11-24 10:34:44] apptainer is not installed, using version from CVMFS
[2025-11-24 10:34:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:34:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-11-24 10:34:45] apptainer works
[2025-11-24 10:34:45] Set ATHENA_PROC_NUMBER=4
[2025-11-24 10:34:45] Set ATHENA_CORE_NUMBER=4
[2025-11-24 10:34:45] Starting ATLAS job with PandaID=6893887266
[2025-11-24 10:34:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:34:15]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:34:15] 2025-11-25 01:30:49,834 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6893887266/HITS.47523449._009755.pool.root.1 since it does not exist
[2025-11-25 02:34:15] 2025-11-25 01:30:49,843 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2686.851531249999
[2025-11-25 02:34:15] 2025-11-25 01:30:49,881 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6893887266/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 02:34:15] 2025-11-25 01:30:49,882 | INFO     | extracted standard info from prmon json
[2025-11-25 02:34:15] 2025-11-25 01:30:49,882 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:34:15] 2025-11-25 01:30:49,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:34:15] 2025-11-25 01:30:49,899 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:34:15] 2025-11-25 01:30:49,901 | INFO     | sum of square deviations: 257549963855.0
[2025-11-25 02:34:15] 2025-11-25 01:30:49,920 | INFO     | sum of deviations: 729651558956.5
[2025-11-25 02:34:15] 2025-11-25 01:30:49,920 | INFO     | mean x: 1764005574.5
[2025-11-25 02:34:15] 2025-11-25 01:30:49,920 | INFO     | mean y: 2274772.7138297874
[2025-11-25 02:34:15] 2025-11-25 01:30:49,920 | INFO     | intersect: -4995238712.345407
[2025-11-25 02:34:15] 2025-11-25 01:30:49,921 | INFO     | chi2: 4.099051405351609
[2025-11-25 02:34:15] 2025-11-25 01:30:49,922 | INFO     | sum of square deviations: 253461943020.0
[2025-11-25 02:34:15] 2025-11-25 01:30:49,941 | INFO     | sum of deviations: 928159717270.0
[2025-11-25 02:34:15] 2025-11-25 01:30:49,941 | INFO     | mean x: 1764005422.0
[2025-11-25 02:34:15] 2025-11-25 01:30:49,941 | INFO     | mean y: 2282171.502673797
[2025-11-25 02:34:15] 2025-11-25 01:30:49,941 | INFO     | intersect: -6457380980.440708
[2025-11-25 02:34:15] 2025-11-25 01:30:49,942 | INFO     | chi2: 1.9061141460789053
[2025-11-25 02:34:15] 2025-11-25 01:30:49,942 | INFO     | current chi2=1.9061141460789053 (change=53.49865230793801 %)
[2025-11-25 02:34:15] 2025-11-25 01:30:49,943 | INFO     | sum of square deviations: 249417411372.5
[2025-11-25 02:34:15] 2025-11-25 01:30:49,961 | INFO     | sum of deviations: 914350456536.5
[2025-11-25 02:34:15] 2025-11-25 01:30:49,961 | INFO     | mean x: 1764005269.5
[2025-11-25 02:34:15] 2025-11-25 01:30:49,961 | INFO     | mean y: 2281649.927956989
[2025-11-25 02:34:15] 2025-11-25 01:30:49,962 | INFO     | intersect: -6464464254.556048
[2025-11-25 02:34:15] 2025-11-25 01:30:49,962 | INFO     | chi2: 1.900929637842935
[2025-11-25 02:34:15] 2025-11-25 01:30:49,963 | INFO     | current chi2=1.900929637842935 (change=0.271993586881216 %)
[2025-11-25 02:34:15] 2025-11-25 01:30:49,963 | INFO     | right removable region: 929
[2025-11-25 02:34:15] 2025-11-25 01:30:49,964 | INFO     | sum of square deviations: 253461943020.0
[2025-11-25 02:34:15] 2025-11-25 01:30:49,982 | INFO     | sum of deviations: 561760006047.0
[2025-11-25 02:34:15] 2025-11-25 01:30:49,983 | INFO     | mean x: 1764005727.0
[2025-11-25 02:34:15] 2025-11-25 01:30:49,983 | INFO     | mean y: 2281023.893048128
[2025-11-25 02:34:15] 2025-11-25 01:30:49,983 | INFO     | intersect: -3907370484.571359
[2025-11-25 02:34:15] 2025-11-25 01:30:49,984 | INFO     | chi2: 2.2853364222076005
[2025-11-25 02:34:15] 2025-11-25 01:30:49,984 | INFO     | current chi2=2.2853364222076005 (change=44.24718803906856 %)
[2025-11-25 02:34:15] 2025-11-25 01:30:49,985 | INFO     | sum of square deviations: 249417411372.5
[2025-11-25 02:34:15] 2025-11-25 01:30:50,004 | INFO     | sum of deviations: 544502990268.9995
[2025-11-25 02:34:15] 2025-11-25 01:30:50,004 | INFO     | mean x: 1764005879.5
[2025-11-25 02:34:15] 2025-11-25 01:30:50,004 | INFO     | mean y: 2281673.541935484
[2025-11-25 02:34:15] 2025-11-25 01:30:50,004 | INFO     | intersect: -3848718426.869454
[2025-11-25 02:34:15] 2025-11-25 01:30:50,005 | INFO     | chi2: 2.2787781684762622
[2025-11-25 02:34:15] 2025-11-25 01:30:50,005 | INFO     | current chi2=2.2787781684762622 (change=0.2869710414453139 %)
[2025-11-25 02:34:15] 2025-11-25 01:30:50,006 | INFO     | left removable region: 20
[2025-11-25 02:34:15] 2025-11-25 01:30:50,007 | INFO     | sum of square deviations: 232900031910.0
[2025-11-25 02:34:15] 2025-11-25 01:30:50,024 | INFO     | sum of deviations: 702262778525.9999
[2025-11-25 02:34:15] 2025-11-25 01:30:50,024 | INFO     | mean x: 1764005849.0
[2025-11-25 02:34:15] 2025-11-25 01:30:50,025 | INFO     | mean y: 2289469.437843784
[2025-11-25 02:34:15] 2025-11-25 01:30:50,025 | INFO     | intersect: -5316712158.40893
[2025-11-25 02:34:15] 2025-11-25 01:30:50,026 | INFO     | chi2: 0.06554563100523668
[2025-11-25 02:34:15] 2025-11-25 01:30:50,026 | INFO     | current memory leak: 3.02 B/s (using 909 data points, chi2=0.07)
[2025-11-25 02:34:15] 2025-11-25 01:30:50,027 | INFO     | could have reported an average CPU frequency of 2668 MHz (35 samples)
[2025-11-25 02:34:15] 2025-11-25 01:30:50,027 | INFO     | ..............................
[2025-11-25 02:34:15] 2025-11-25 01:30:50,027 | INFO     | . Timing measurements:
[2025-11-25 02:34:15] 2025-11-25 01:30:50,027 | INFO     | . get job = 0 s
[2025-11-25 02:34:15] 2025-11-25 01:30:50,028 | INFO     | . initial setup = 1 s
[2025-11-25 02:34:15] 2025-11-25 01:30:50,028 | INFO     | . payload setup = 9 s
[2025-11-25 02:34:15] 2025-11-25 01:30:50,028 | INFO     | . stage-in = 0 s
[2025-11-25 02:34:15] 2025-11-25 01:30:50,028 | INFO     | . payload execution = 57307 s
[2025-11-25 02:34:15] 2025-11-25 01:30:50,028 | INFO     | . stage-out = 2 s
[2025-11-25 02:34:15] 2025-11-25 01:30:50,028 | INFO     | . log creation = 0 s
[2025-11-25 02:34:15] 2025-11-25 01:30:50,028 | INFO     | ..............................
[2025-11-25 02:34:15] 2025-11-25 01:30:50,124 | INFO     | 
[2025-11-25 02:34:15] 2025-11-25 01:30:50,125 | INFO     | job summary report
[2025-11-25 02:34:15] 2025-11-25 01:30:50,125 | INFO     | --------------------------------------------------
[2025-11-25 02:34:15] 2025-11-25 01:30:50,125 | INFO     | PanDA job id: 6893887266
[2025-11-25 02:34:15] 2025-11-25 01:30:50,125 | INFO     | task id: 47523449
[2025-11-25 02:34:15] 2025-11-25 01:30:50,125 | INFO     | errors: (none)
[2025-11-25 02:34:15] 2025-11-25 01:30:50,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:34:15] 2025-11-25 01:30:50,126 | INFO     | pilot state: finished 
[2025-11-25 02:34:15] 2025-11-25 01:30:50,126 | INFO     | transexitcode: 0
[2025-11-25 02:34:15] 2025-11-25 01:30:50,126 | INFO     | exeerrorcode: 0
[2025-11-25 02:34:15] 2025-11-25 01:30:50,126 | INFO     | exeerrordiag: 
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | exitcode: 0
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | exitmsg: OK
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | cpuconsumptiontime: 226383 s
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | nevents: 1000
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | neventsw: 0
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | pid: 3043219
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | pgrp: 3043219
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | corecount: 4
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | event service: False
[2025-11-25 02:34:15] 2025-11-25 01:30:50,127 | INFO     | sizes: {0: 2297979, 1: 2298847, 8: 2299109, 12: 2299137, 57321: 2353314, 57322: 2353313, 57324: 2363306, 57325: 2363362, 57332: 2363636}
[2025-11-25 02:34:15] 2025-11-25 01:30:50,128 | INFO     | --------------------------------------------------
[2025-11-25 02:34:15] 2025-11-25 01:30:50,128 | INFO     | 
[2025-11-25 02:34:15] 2025-11-25 01:30:50,128 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-11-25 02:34:15] 2025-11-25 01:30:50,158 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,159 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,159 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,159 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,159 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,160 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,160 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:34:15] 2025-11-25 01:30:50,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,161 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:34:15] 2025-11-25 01:30:50,161 | INFO     | job 6893887266 has completed (purged errors)
[2025-11-25 02:34:15] 2025-11-25 01:30:50,161 | INFO     | overall cleanup function is called
[2025-11-25 02:34:15] 2025-11-25 01:30:50,930 | INFO     | number of running child processes to parent process 3043219: 1
[2025-11-25 02:34:15] 2025-11-25 01:30:50,930 | INFO     | maximum number of monitored processes: 12
[2025-11-25 02:34:15] 2025-11-25 01:30:50,930 | INFO     | aborting job monitoring since job object (job id=6893887266) has expired
[2025-11-25 02:34:15] 2025-11-25 01:30:51,186 | INFO     | --- collectZombieJob: --- 10, [3043219]
[2025-11-25 02:34:15] 2025-11-25 01:30:51,187 | INFO     | zombie collector waiting for pid 3043219
[2025-11-25 02:34:15] 2025-11-25 01:30:51,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:34:15] 2025-11-25 01:30:51,187 | INFO     | collected zombie processes
[2025-11-25 02:34:15] 2025-11-25 01:30:51,187 | INFO     | will attempt to kill all subprocesses of pid=3043219
[2025-11-25 02:34:15] 2025-11-25 01:30:51,961 | INFO     | process IDs to be killed: [3043219] (in reverse order)
[2025-11-25 02:34:15] 2025-11-25 01:30:52,201 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:34:15] 2025-11-25 01:30:52,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:34:15] 2025-11-25 01:30:52,234 | INFO     | did not find any defunct processes belonging to 3043219
[2025-11-25 02:34:15] 2025-11-25 01:30:52,266 | INFO     | did not find any defunct processes belonging to 3043219
[2025-11-25 02:34:15] 2025-11-25 01:30:52,268 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:34:15] 2025-11-25 01:30:52,268 | INFO     | ready for new job
[2025-11-25 02:34:15] 2025-11-25 01:30:52,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:34:15] 2025-11-25 01:30:52,275 | INFO     | ***************************************
[2025-11-25 02:34:15] 2025-11-25 01:30:52,275 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:34:15] 2025-11-25 01:30:52,275 | INFO     | ***************************************
[2025-11-25 02:34:15] 2025-11-25 01:30:52,275 | INFO     | 
[2025-11-25 02:34:15] 2025-11-25 01:30:52,284 | INFO     | architecture information:
[2025-11-25 02:34:15] 2025-11-25 01:30:52,284 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:34:15] 2025-11-25 01:30:52,307 | INFO     | cat /etc/os-release:
[2025-11-25 02:34:15] NAME="CentOS Linux"
[2025-11-25 02:34:15] VERSION="7 (Core)"
[2025-11-25 02:34:15] ID="centos"
[2025-11-25 02:34:15] ID_LIKE="rhel fedora"
[2025-11-25 02:34:15] VERSION_ID="7"
[2025-11-25 02:34:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:34:15] ANSI_COLOR="0;31"
[2025-11-25 02:34:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:34:15] HOME_URL="https://www.centos.org/"
[2025-11-25 02:34:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:34:15] 
[2025-11-25 02:34:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:34:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:34:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:34:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:34:15] 
[2025-11-25 02:34:15] 2025-11-25 01:30:52,308 | INFO     | ***************************************
[2025-11-25 02:34:15] 2025-11-25 01:30:52,811 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-11-25 02:34:15] 2025-11-25 01:30:52,836 | INFO     | sufficient remaining disk space (3287417880576 B)
[2025-11-25 02:34:15] 2025-11-25 01:30:52,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:34:15] 2025-11-25 01:30:52,836 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:34:15] 2025-11-25 01:30:52,837 | INFO     | update_server=False
[2025-11-25 02:34:15] 2025-11-25 01:30:52,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:34:15] 2025-11-25 01:30:52,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:34:15] 2025-11-25 01:30:52,838 | INFO     | aborting loop
[2025-11-25 02:34:15] 2025-11-25 01:30:52,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:34:15] 2025-11-25 01:30:52,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:34:15] 2025-11-25 01:30:53,340 | INFO     | all payload control threads have been joined
[2025-11-25 02:34:15] 2025-11-25 01:30:53,343 | INFO     | all data control threads have been joined
[2025-11-25 02:34:15] 2025-11-25 01:30:53,842 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:53,843 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:53,946 | INFO     | all job control threads have been joined
[2025-11-25 02:34:15] 2025-11-25 01:30:53,989 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,207 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,216 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,345 | INFO     | [payload] control thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,346 | INFO     | [data] control thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,719 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,720 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,799 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,824 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,830 | INFO     | [job] validate thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,847 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:54,951 | INFO     | [job] control thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:55,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:34:15] 2025-11-25 01:30:56,138 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:30:56,992 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:34:15] 2025-11-25 01:31:23,249 | INFO     | PID=3034526 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 02:34:15] 2025-11-25 01:31:23,250 | INFO     | .. there are 7 such processes running
[2025-11-25 02:34:15] 2025-11-25 01:31:23,250 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:34:15] 2025-11-25 01:31:23,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:34:15] 2025-11-25 01:31:23,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:34:15] 2025-11-25 01:31:34,012 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:34:15] 2025-11-25 01:31:35,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22984218240832)>', '<ExcThread(monitor, started 22983638763264)>']
[2025-11-25 02:34:15] 2025-11-25 01:31:35,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:34:15] 2025-11-25 01:31:35,311 | INFO     | [monitor] control thread has ended
[2025-11-25 02:34:15] 2025-11-25 01:31:40,259 | INFO     | all workflow threads have been joined
[2025-11-25 02:34:15] 2025-11-25 01:31:40,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:34:15] 2025-11-25 01:31:40,260 | INFO     | traces error code: 0
[2025-11-25 02:34:15] 2025-11-25 01:31:40,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:34:15] 2025-11-25 01:31:40,443 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:34:15] 2025-11-25 01:31:40,447 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:34:15] 2025-11-25 01:31:40,451 [wrapper] pilotpid: 3034526
[2025-11-25 02:34:15] 2025-11-25 01:31:40,454 [wrapper] Pilot exit status: 0
[2025-11-25 02:34:15] 2025-11-25 01:31:40,471 [wrapper] pandaids: 6893887266
[2025-11-25 02:34:15] 2025-11-25 01:31:40,653 [wrapper] cleanup supervisor_pilot  339982 3034527
[2025-11-25 02:34:15] 2025-11-25 01:31:40,657 [wrapper] Test setup, not cleaning
[2025-11-25 02:34:15] 2025-11-25 01:31:40,662 [wrapper] apfmon messages muted
[2025-11-25 02:34:15] 2025-11-25 01:31:40,666 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:34:15] 2025-11-25 01:31:40,670 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:34:15]  *** Error codes and diagnostics ***
[2025-11-25 02:34:15]     "exeErrorCode": 0,
[2025-11-25 02:34:15]     "exeErrorDiag": "",
[2025-11-25 02:34:15]     "pilotErrorCode": 0,
[2025-11-25 02:34:15]     "pilotErrorDiag": "",
[2025-11-25 02:34:15]  *** Listing of results directory ***
[2025-11-25 02:34:15] total 1323924
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc    576529 Nov 21 00:11 pilot3.tar.gz
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc      5112 Nov 21 00:25 queuedata.json
[2025-11-25 02:34:15] -rwx------ 1 boinc boinc     36292 Nov 21 00:27 runpilot2-wrapper.sh
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc       100 Nov 24 10:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:34:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 10:34 run_atlas
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc       105 Nov 24 10:34 job.xml
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc      6687 Nov 24 10:34 init_data.xml
[2025-11-25 02:34:15] -rw-r--r-- 2 boinc boinc 409760482 Nov 24 10:34 EVNT.47493127._000976.pool.root.1
[2025-11-25 02:34:15] drwxrwx--x 2 boinc boinc      4096 Nov 24 10:34 shared
[2025-11-25 02:34:15] -rw-r--r-- 2 boinc boinc    590101 Nov 24 10:34 input.tar.gz
[2025-11-25 02:34:15] -rw-r--r-- 2 boinc boinc     15847 Nov 24 10:34 start_atlas.sh
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc         0 Nov 24 10:34 boinc_lockfile
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc      2786 Nov 24 10:34 pandaJob.out
[2025-11-25 02:34:15] -rw------- 1 boinc boinc    989824 Nov 24 10:34 agis_schedconf.cvmfs.json
[2025-11-25 02:34:15] drwx------ 5 boinc boinc      4096 Nov 24 10:35 pilot3
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc       532 Nov 25 02:24 boinc_task_state.xml
[2025-11-25 02:34:15] -rw------- 1 boinc boinc 922906872 Nov 25 02:30 HITS.47523449._009755.pool.root.1
[2025-11-25 02:34:15] -rw------- 1 boinc boinc      1041 Nov 25 02:30 memory_monitor_summary.json
[2025-11-25 02:34:15] -rw------- 1 boinc boinc   1516227 Nov 25 02:30 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:34:15] -rw------- 1 boinc boinc   1675759 Nov 25 02:30 log.47523449._009755.job.log.tgz.1
[2025-11-25 02:34:15] -rw------- 1 boinc boinc      8609 Nov 25 02:30 heartbeat.json
[2025-11-25 02:34:15] -rw------- 1 boinc boinc        95 Nov 25 02:31 pilot_heartbeat.json
[2025-11-25 02:34:15] -rw------- 1 boinc boinc      4836 Nov 25 02:31 pilotlog.txt
[2025-11-25 02:34:15] -rw------- 1 boinc boinc   7878296 Nov 25 02:31 log.47523449._009755.job.log.1
[2025-11-25 02:34:15] -rw------- 1 boinc boinc       353 Nov 25 02:31 output.list
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc       620 Nov 25 02:31 runtime_log
[2025-11-25 02:34:15] -rw------- 1 boinc boinc   9574400 Nov 25 02:31 result.tar.gz
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc      9223 Nov 25 02:31 runtime_log.err
[2025-11-25 02:34:15] -rw------- 1 boinc boinc       671 Nov 25 02:31 gmqLDmTETg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnfIKDmgXO9dm.diag
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc        28 Nov 25 02:34 wrapper_checkpoint.txt
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc      8192 Nov 25 02:34 boinc_mmap_file
[2025-11-25 02:34:15] -rw-r--r-- 1 boinc boinc     21172 Nov 25 02:34 stderr.txt
[2025-11-25 02:34:15] HITS file was successfully produced:
[2025-11-25 02:34:15] -rw------- 1 boinc boinc 922906872 Nov 25 02:30 shared/HITS.pool.root.1
[2025-11-25 02:34:15]  *** Contents of shared directory: ***
[2025-11-25 02:34:15] total 1311396
[2025-11-25 02:34:15] -rw-r--r-- 2 boinc boinc 409760482 Nov 24 10:34 ATLAS.root_0
[2025-11-25 02:34:15] -rw-r--r-- 2 boinc boinc    590101 Nov 24 10:34 input.tar.gz
[2025-11-25 02:34:15] -rw-r--r-- 2 boinc boinc     15847 Nov 24 10:34 start_atlas.sh
[2025-11-25 02:34:15] -rw------- 1 boinc boinc 922906872 Nov 25 02:30 HITS.pool.root.1
[2025-11-25 02:34:15] -rw------- 1 boinc boinc   9574400 Nov 25 02:31 result.tar.gz
02:34:16 (3030449): run_atlas exited; CPU time 229628.925614
02:34:16 (3030449): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN