Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:35:13 (2361355): wrapper (7.7.26015): starting
08:35:13 (2361355): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 08:35:13] Arguments: --nthreads 4
[2025-11-22 08:35:13] Threads: 4
[2025-11-22 08:35:13] Checking for CVMFS
[2025-11-22 08:35:13] No cvmfs_config command found, will try listing directly
[2025-11-22 08:35:13] CVMFS is ok
[2025-11-22 08:35:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 08:35:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 08:35:13] Further information can be found at the LHC@home message board.
[2025-11-22 08:35:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 08:35:13] Checking for apptainer binary...
[2025-11-22 08:35:13] which: no apptainer in ((null))
[2025-11-22 08:35:13] apptainer is not installed, using version from CVMFS
[2025-11-22 08:35:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 08:35:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-11-22 08:35:13] apptainer works
[2025-11-22 08:35:13] Set ATHENA_PROC_NUMBER=4
[2025-11-22 08:35:13] Set ATHENA_CORE_NUMBER=4
[2025-11-22 08:35:13] Starting ATLAS job with PandaID=6893887847
[2025-11-22 08:35:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:32:23]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:32:23] 2025-11-22 23:29:48,930 | INFO     | .. there are 7 such processes running
[2025-11-23 00:32:23] 2025-11-22 23:29:49,932 | INFO     | time since job start (57251s) is within the limit (172800.0s)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,500 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 00:32:23] 2025-11-22 23:29:50,532 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2811.9839921874996
[2025-11-23 00:32:23] 2025-11-22 23:29:50,558 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6893887847/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,559 | INFO     | extracted standard info from prmon json
[2025-11-23 00:32:23] 2025-11-22 23:29:50,559 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 00:32:23] 2025-11-22 23:29:50,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 00:32:23] 2025-11-22 23:29:50,572 | INFO     | fitting pss+swap vs Time
[2025-11-23 00:32:23] 2025-11-22 23:29:50,573 | INFO     | sum of square deviations: 255909628082.43152
[2025-11-23 00:32:23] 2025-11-22 23:29:50,593 | INFO     | sum of deviations: 735874323928.3392
[2025-11-23 00:32:23] 2025-11-22 23:29:50,593 | INFO     | mean x: 1763825586.5085287
[2025-11-23 00:32:23] 2025-11-22 23:29:50,593 | INFO     | mean y: 2285284.332622601
[2025-11-23 00:32:23] 2025-11-22 23:29:50,593 | INFO     | intersect: -5069637842.300907
[2025-11-23 00:32:23] 2025-11-22 23:29:50,594 | INFO     | chi2: 4.4540424376378445
[2025-11-23 00:32:23] 2025-11-22 23:29:50,595 | INFO     | sum of square deviations: 251839033269.93134
[2025-11-23 00:32:23] 2025-11-22 23:29:50,614 | INFO     | sum of deviations: 937752944858.8674
[2025-11-23 00:32:23] 2025-11-22 23:29:50,614 | INFO     | mean x: 1763825434.0085745
[2025-11-23 00:32:23] 2025-11-22 23:29:50,614 | INFO     | mean y: 2292840.516613076
[2025-11-23 00:32:23] 2025-11-22 23:29:50,614 | INFO     | intersect: -6565523408.943221
[2025-11-23 00:32:23] 2025-11-22 23:29:50,615 | INFO     | chi2: 2.0950890219624547
[2025-11-23 00:32:23] 2025-11-22 23:29:50,615 | INFO     | current chi2=2.0950890219624547 (change=52.96207767895531 %)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,616 | INFO     | sum of square deviations: 247811834619.93112
[2025-11-23 00:32:23] 2025-11-22 23:29:50,634 | INFO     | sum of deviations: 938239608830.2593
[2025-11-23 00:32:23] 2025-11-22 23:29:50,634 | INFO     | mean x: 1763825281.5086207
[2025-11-23 00:32:23] 2025-11-22 23:29:50,634 | INFO     | mean y: 2292856.5926724137
[2025-11-23 00:32:23] 2025-11-22 23:29:50,634 | INFO     | intersect: -6675720502.638841
[2025-11-23 00:32:23] 2025-11-22 23:29:50,635 | INFO     | chi2: 2.063006019725219
[2025-11-23 00:32:23] 2025-11-22 23:29:50,635 | INFO     | current chi2=2.063006019725219 (change=1.5313431506210604 %)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,635 | INFO     | right removable region: 927
[2025-11-23 00:32:23] 2025-11-22 23:29:50,636 | INFO     | sum of square deviations: 251839028389.9313
[2025-11-23 00:32:23] 2025-11-22 23:29:50,655 | INFO     | sum of deviations: 562856202614.9917
[2025-11-23 00:32:23] 2025-11-22 23:29:50,656 | INFO     | mean x: 1763825739.0085745
[2025-11-23 00:32:23] 2025-11-22 23:29:50,656 | INFO     | mean y: 2291754.001071811
[2025-11-23 00:32:23] 2025-11-22 23:29:50,656 | INFO     | intersect: -3939830576.6004853
[2025-11-23 00:32:23] 2025-11-22 23:29:50,657 | INFO     | chi2: 2.530389129733281
[2025-11-23 00:32:23] 2025-11-22 23:29:50,657 | INFO     | current chi2=2.530389129733281 (change=43.188930838403806 %)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,658 | INFO     | sum of square deviations: 247811824859.93112
[2025-11-23 00:32:23] 2025-11-22 23:29:50,681 | INFO     | sum of deviations: 550942991547.1726
[2025-11-23 00:32:23] 2025-11-22 23:29:50,681 | INFO     | mean x: 1763825891.5086207
[2025-11-23 00:32:23] 2025-11-22 23:29:50,681 | INFO     | mean y: 2292204.603448276
[2025-11-23 00:32:23] 2025-11-22 23:29:50,681 | INFO     | intersect: -3919100625.5626802
[2025-11-23 00:32:23] 2025-11-22 23:29:50,682 | INFO     | chi2: 2.5293801773076097
[2025-11-23 00:32:23] 2025-11-22 23:29:50,682 | INFO     | current chi2=2.5293801773076097 (change=0.03987340973827566 %)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,682 | INFO     | left removable region: 20
[2025-11-23 00:32:23] 2025-11-22 23:29:50,683 | INFO     | sum of square deviations: 231366218393.9296
[2025-11-23 00:32:23] 2025-11-22 23:29:50,701 | INFO     | sum of deviations: 746116680673.5197
[2025-11-23 00:32:23] 2025-11-22 23:29:50,701 | INFO     | mean x: 1763825861.0088203
[2025-11-23 00:32:23] 2025-11-22 23:29:50,701 | INFO     | mean y: 2299972.9349503857
[2025-11-23 00:32:23] 2025-11-22 23:29:50,701 | INFO     | intersect: -5685738262.886181
[2025-11-23 00:32:23] 2025-11-22 23:29:50,702 | INFO     | chi2: 0.11005636686685538
[2025-11-23 00:32:23] 2025-11-22 23:29:50,702 | INFO     | current memory leak: 3.22 B/s (using 907 data points, chi2=0.11)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | could have reported an average CPU frequency of 2735 MHz (35 samples)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | ..............................
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | . Timing measurements:
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | . get job = 0 s
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | . initial setup = 1 s
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | . payload setup = 20 s
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | . stage-in = 0 s
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | . payload execution = 57172 s
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | . stage-out = 2 s
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | . log creation = 0 s
[2025-11-23 00:32:23] 2025-11-22 23:29:50,704 | INFO     | ..............................
[2025-11-23 00:32:23] 2025-11-22 23:29:50,805 | INFO     | 
[2025-11-23 00:32:23] 2025-11-22 23:29:50,805 | INFO     | job summary report
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | --------------------------------------------------
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | PanDA job id: 6893887847
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | task id: 47523449
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | errors: (none)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | pilot state: finished 
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | transexitcode: 0
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | exeerrorcode: 0
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | exeerrordiag: 
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | exitcode: 0
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | exitmsg: OK
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | cpuconsumptiontime: 223101 s
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | nevents: 1000
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | neventsw: 0
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | pid: 2373824
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | pgrp: 2373824
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | corecount: 4
[2025-11-23 00:32:23] 2025-11-22 23:29:50,806 | INFO     | event service: False
[2025-11-23 00:32:23] 2025-11-22 23:29:50,807 | INFO     | sizes: {0: 2298705, 1: 2298847, 11: 2298847, 14: 2299137, 22: 2299165, 57195: 2352234, 57196: 2352361, 57199: 2361435, 57201: 2361491, 57216: 2361737}
[2025-11-23 00:32:23] 2025-11-22 23:29:50,807 | INFO     | --------------------------------------------------
[2025-11-23 00:32:23] 2025-11-22 23:29:50,807 | INFO     | 
[2025-11-23 00:32:23] 2025-11-22 23:29:50,807 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-11-23 00:32:23] 2025-11-22 23:29:50,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,835 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,835 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,835 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,835 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,836 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:32:23] 2025-11-22 23:29:50,837 | INFO     | job 6893887847 has completed (purged errors)
[2025-11-23 00:32:23] 2025-11-22 23:29:50,837 | INFO     | overall cleanup function is called
[2025-11-23 00:32:23] 2025-11-22 23:29:51,855 | INFO     | --- collectZombieJob: --- 10, [2373824]
[2025-11-23 00:32:23] 2025-11-22 23:29:51,856 | INFO     | zombie collector waiting for pid 2373824
[2025-11-23 00:32:23] 2025-11-22 23:29:51,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:32:23] 2025-11-22 23:29:51,856 | INFO     | collected zombie processes
[2025-11-23 00:32:23] 2025-11-22 23:29:51,856 | INFO     | will attempt to kill all subprocesses of pid=2373824
[2025-11-23 00:32:23] 2025-11-22 23:29:52,745 | INFO     | process IDs to be killed: [2373824] (in reverse order)
[2025-11-23 00:32:23] 2025-11-22 23:29:53,000 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:32:23] 2025-11-22 23:29:53,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:32:23] 2025-11-22 23:29:53,032 | INFO     | did not find any defunct processes belonging to 2373824
[2025-11-23 00:32:23] 2025-11-22 23:29:53,061 | INFO     | did not find any defunct processes belonging to 2373824
[2025-11-23 00:32:23] 2025-11-22 23:29:53,062 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:32:23] 2025-11-22 23:29:53,062 | INFO     | ready for new job
[2025-11-23 00:32:23] 2025-11-22 23:29:53,063 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:32:23] 2025-11-22 23:29:53,068 | INFO     | ***************************************
[2025-11-23 00:32:23] 2025-11-22 23:29:53,068 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:32:23] 2025-11-22 23:29:53,068 | INFO     | ***************************************
[2025-11-23 00:32:23] 2025-11-22 23:29:53,068 | INFO     | 
[2025-11-23 00:32:23] 2025-11-22 23:29:53,076 | INFO     | architecture information:
[2025-11-23 00:32:23] 2025-11-22 23:29:53,077 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:32:23] 2025-11-22 23:29:53,102 | INFO     | cat /etc/os-release:
[2025-11-23 00:32:23] NAME="CentOS Linux"
[2025-11-23 00:32:23] VERSION="7 (Core)"
[2025-11-23 00:32:23] ID="centos"
[2025-11-23 00:32:23] ID_LIKE="rhel fedora"
[2025-11-23 00:32:23] VERSION_ID="7"
[2025-11-23 00:32:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:32:23] ANSI_COLOR="0;31"
[2025-11-23 00:32:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:32:23] HOME_URL="https://www.centos.org/"
[2025-11-23 00:32:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:32:23] 
[2025-11-23 00:32:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:32:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:32:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:32:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:32:23] 
[2025-11-23 00:32:23] 2025-11-22 23:29:53,103 | INFO     | ***************************************
[2025-11-23 00:32:23] 2025-11-22 23:29:53,605 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-11-23 00:32:23] 2025-11-22 23:29:53,625 | INFO     | sufficient remaining disk space (3315407519744 B)
[2025-11-23 00:32:23] 2025-11-22 23:29:53,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:32:23] 2025-11-22 23:29:53,625 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:32:23] 2025-11-22 23:29:53,625 | INFO     | update_server=False
[2025-11-23 00:32:23] 2025-11-22 23:29:53,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:32:23] 2025-11-22 23:29:53,668 | INFO     | all payload control threads have been joined
[2025-11-23 00:32:23] 2025-11-22 23:29:54,275 | INFO     | all job control threads have been joined
[2025-11-23 00:32:23] 2025-11-22 23:29:54,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:32:23] 2025-11-22 23:29:54,324 | INFO     | aborting loop
[2025-11-23 00:32:23] 2025-11-22 23:29:54,630 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:54,667 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:32:23] 2025-11-22 23:29:54,673 | INFO     | [payload] control thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:54,678 | INFO     | all data control threads have been joined
[2025-11-23 00:32:23] 2025-11-22 23:29:54,679 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:54,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:54,769 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:55,280 | INFO     | [job] control thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:55,318 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:55,328 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:55,599 | INFO     | [job] validate thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:55,683 | INFO     | [data] control thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:55,713 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:55,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:32:23] 2025-11-22 23:29:55,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:32:23] 2025-11-22 23:29:55,858 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:55,929 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:56,672 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:56,822 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:29:59,737 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:32:23] 2025-11-22 23:30:14,672 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:32:23] 2025-11-22 23:30:15,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22849467782976)>', '<ExcThread(monitor, started 22848754149120)>']
[2025-11-23 00:32:23] 2025-11-22 23:30:20,532 | INFO     | all workflow threads have been joined
[2025-11-23 00:32:23] 2025-11-22 23:30:20,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:32:23] 2025-11-22 23:30:20,535 | INFO     | traces error code: 0
[2025-11-23 00:32:23] 2025-11-22 23:30:20,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:32:23] 2025-11-22 23:30:22,037 | INFO     | 57255s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-23 00:32:23] 2025-11-22 23:30:23,950 | INFO     | PID=2365934 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 00:32:23] 2025-11-22 23:30:23,950 | INFO     | .. there are 7 such processes running
[2025-11-23 00:32:23] 2025-11-22 23:30:23,950 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:32:23] 2025-11-22 23:30:23,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:32:23] 2025-11-22 23:30:23,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:32:23] 2025-11-22 23:30:23,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:32:23] 2025-11-22 23:30:23,950 | INFO     | [monitor] control thread has ended
[2025-11-23 00:32:23] 2025-11-22 23:30:24,084 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:32:23] 2025-11-22 23:30:24,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:32:23] 2025-11-22 23:30:24,098 [wrapper] pilotpid: 2365934
[2025-11-23 00:32:23] 2025-11-22 23:30:24,102 [wrapper] Pilot exit status: 0
[2025-11-23 00:32:23] 2025-11-22 23:30:24,157 [wrapper] pandaids: 6893887847
[2025-11-23 00:32:23] 2025-11-22 23:30:24,330 [wrapper] cleanup supervisor_pilot 3625181 2365935
[2025-11-23 00:32:23] 2025-11-22 23:30:24,338 [wrapper] Test setup, not cleaning
[2025-11-23 00:32:23] 2025-11-22 23:30:24,344 [wrapper] apfmon messages muted
[2025-11-23 00:32:23] 2025-11-22 23:30:24,349 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:32:23] 2025-11-22 23:30:24,355 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:32:23]  *** Error codes and diagnostics ***
[2025-11-23 00:32:23]     "exeErrorCode": 0,
[2025-11-23 00:32:23]     "exeErrorDiag": "",
[2025-11-23 00:32:23]     "pilotErrorCode": 0,
[2025-11-23 00:32:23]     "pilotErrorDiag": "",
[2025-11-23 00:32:23]  *** Listing of results directory ***
[2025-11-23 00:32:23] total 1319972
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc    576529 Nov 21 00:11 pilot3.tar.gz
[2025-11-23 00:32:23] -rwx------ 1 boinc boinc     36292 Nov 21 00:53 runpilot2-wrapper.sh
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc      5112 Nov 21 00:53 queuedata.json
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc       100 Nov 22 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:32:23] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 08:35 run_atlas
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc       105 Nov 22 08:35 job.xml
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc      6686 Nov 22 08:35 init_data.xml
[2025-11-23 00:32:23] -rw-r--r-- 2 boinc boinc 411317288 Nov 22 08:35 EVNT.47493127._000990.pool.root.1
[2025-11-23 00:32:23] -rw-r--r-- 2 boinc boinc     15847 Nov 22 08:35 start_atlas.sh
[2025-11-23 00:32:23] drwxrwx--x 2 boinc boinc      4096 Nov 22 08:35 shared
[2025-11-23 00:32:23] -rw-r--r-- 2 boinc boinc    590102 Nov 22 08:35 input.tar.gz
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc         0 Nov 22 08:35 boinc_lockfile
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc      2786 Nov 22 08:35 pandaJob.out
[2025-11-23 00:32:23] -rw------- 1 boinc boinc    989752 Nov 22 08:35 agis_schedconf.cvmfs.json
[2025-11-23 00:32:23] drwx------ 5 boinc boinc      4096 Nov 22 08:35 pilot3
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc       532 Nov 23 00:23 boinc_task_state.xml
[2025-11-23 00:32:23] -rw------- 1 boinc boinc 917492720 Nov 23 00:28 HITS.47523449._009894.pool.root.1
[2025-11-23 00:32:23] -rw------- 1 boinc boinc      1039 Nov 23 00:29 memory_monitor_summary.json
[2025-11-23 00:32:23] -rw------- 1 boinc boinc   1526164 Nov 23 00:29 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:32:23] -rw------- 1 boinc boinc   1673525 Nov 23 00:29 log.47523449._009894.job.log.tgz.1
[2025-11-23 00:32:23] -rw------- 1 boinc boinc      8595 Nov 23 00:29 heartbeat.json
[2025-11-23 00:32:23] -rw------- 1 boinc boinc        95 Nov 23 00:29 pilot_heartbeat.json
[2025-11-23 00:32:23] -rw------- 1 boinc boinc       938 Nov 23 00:30 pilotlog.txt
[2025-11-23 00:32:23] -rw------- 1 boinc boinc   7786277 Nov 23 00:30 log.47523449._009894.job.log.1
[2025-11-23 00:32:23] -rw------- 1 boinc boinc       353 Nov 23 00:30 output.list
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc       620 Nov 23 00:30 runtime_log
[2025-11-23 00:32:23] -rw------- 1 boinc boinc   9482240 Nov 23 00:30 result.tar.gz
[2025-11-23 00:32:23] -rw------- 1 boinc boinc       670 Nov 23 00:30 srJNDm7dTg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoAHKDm7BF9Lo.diag
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc      9223 Nov 23 00:30 runtime_log.err
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc        28 Nov 23 00:32 wrapper_checkpoint.txt
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc      8192 Nov 23 00:32 boinc_mmap_file
[2025-11-23 00:32:23] -rw-r--r-- 1 boinc boinc     21140 Nov 23 00:32 stderr.txt
[2025-11-23 00:32:23] HITS file was successfully produced:
[2025-11-23 00:32:23] -rw------- 1 boinc boinc 917492720 Nov 23 00:28 shared/HITS.pool.root.1
[2025-11-23 00:32:23]  *** Contents of shared directory: ***
[2025-11-23 00:32:23] total 1307536
[2025-11-23 00:32:23] -rw-r--r-- 2 boinc boinc 411317288 Nov 22 08:35 ATLAS.root_0
[2025-11-23 00:32:23] -rw-r--r-- 2 boinc boinc     15847 Nov 22 08:35 start_atlas.sh
[2025-11-23 00:32:23] -rw-r--r-- 2 boinc boinc    590102 Nov 22 08:35 input.tar.gz
[2025-11-23 00:32:23] -rw------- 1 boinc boinc 917492720 Nov 23 00:28 HITS.pool.root.1
[2025-11-23 00:32:23] -rw------- 1 boinc boinc   9482240 Nov 23 00:30 result.tar.gz
00:32:25 (2361355): run_atlas exited; CPU time 225608.908474
00:32:25 (2361355): called boinc_finish(0)

</stderr_txt>
]]>

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