Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:37:50 (839): wrapper (7.7.26015): starting
12:37:50 (839): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 12:37:50] Arguments: --nthreads 8
[2025-11-21 12:37:50] Threads: 8
[2025-11-21 12:37:50] Checking for CVMFS
[2025-11-21 12:37:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 12:37:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 12:37:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 12:37:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 12:37:50] 2.11.2.0 2918 135595 91420 153138 2 82 19620788 20275200 1 130560 0 50887323 99.933 6238475 34957 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 12:37:50] CVMFS is ok
[2025-11-21 12:37:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 12:37:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 12:37:50] Further information can be found at the LHC@home message board.
[2025-11-21 12:37:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 12:37:50] Checking for apptainer binary...
[2025-11-21 12:37:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 12:37:50] Running /usr/bin/apptainer --version
[2025-11-21 12:37:50] apptainer version 1.3.2-1.el7
[2025-11-21 12:37:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 12:37:52] c-115-8.aglt2.org
[2025-11-21 12:37:52] apptainer works
[2025-11-21 12:37:52] Set ATHENA_PROC_NUMBER=8
[2025-11-21 12:37:52] Set ATHENA_CORE_NUMBER=8
[2025-11-21 12:37:52] Starting ATLAS job with PandaID=6893889428
[2025-11-21 12:37:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 00:06:23]  *** The last 200 lines of the pilot log: ***
[2025-11-22 00:06:23] 2025-11-22 05:05:29,401 | INFO     | time since job start (41240s) is within the limit (172800.0s)
[2025-11-22 00:06:23] 2025-11-22 05:05:31,230 | INFO     | monitor loop #3041: job 0:6893889428 is in state 'finished'
[2025-11-22 00:06:23] 2025-11-22 05:05:31,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:06:23] 2025-11-22 05:05:31,406 | INFO     | time since job start (41242s) is within the limit (172800.0s)
[2025-11-22 00:06:23] 2025-11-22 05:05:32,863 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 00:06:23] 2025-11-22 05:05:32,867 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-22 00:06:23] 2025-11-22 05:05:32,869 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893889428/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 00:06:23] 2025-11-22 05:05:32,870 | INFO     | extracted standard info from prmon json
[2025-11-22 00:06:23] 2025-11-22 05:05:32,870 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 00:06:23] 2025-11-22 05:05:32,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 00:06:23] 2025-11-22 05:05:32,881 | INFO     | fitting pss+swap vs Time
[2025-11-22 00:06:23] 2025-11-22 05:05:32,882 | INFO     | sum of square deviations: 95790000111.1287
[2025-11-22 00:06:23] 2025-11-22 05:05:32,891 | INFO     | sum of deviations: 623432986710.3933
[2025-11-22 00:06:23] 2025-11-22 05:05:32,891 | INFO     | mean x: 1763767309.0931952
[2025-11-22 00:06:23] 2025-11-22 05:05:32,891 | INFO     | mean y: 3157229.2159763314
[2025-11-22 00:06:23] 2025-11-22 05:05:32,891 | INFO     | intersect: -11476023479.568424
[2025-11-22 00:06:23] 2025-11-22 05:05:32,892 | INFO     | chi2: 6.903376672793737
[2025-11-22 00:06:23] 2025-11-22 05:05:32,892 | INFO     | sum of square deviations: 93680296809.35606
[2025-11-22 00:06:23] 2025-11-22 05:05:32,901 | INFO     | sum of deviations: 902622581491.8258
[2025-11-22 00:06:23] 2025-11-22 05:05:32,901 | INFO     | mean x: 1763767156.5976155
[2025-11-22 00:06:23] 2025-11-22 05:05:32,901 | INFO     | mean y: 3177412.7660208642
[2025-11-22 00:06:23] 2025-11-22 05:05:32,901 | INFO     | intersect: -16990962425.18162
[2025-11-22 00:06:23] 2025-11-22 05:05:32,902 | INFO     | chi2: 3.037637541068073
[2025-11-22 00:06:23] 2025-11-22 05:05:32,902 | INFO     | current chi2=3.037637541068073 (change=55.99780100310291 %)
[2025-11-22 00:06:23] 2025-11-22 05:05:32,903 | INFO     | sum of square deviations: 91601803395.05713
[2025-11-22 00:06:23] 2025-11-22 05:05:32,911 | INFO     | sum of deviations: 981067720398.3275
[2025-11-22 00:06:23] 2025-11-22 05:05:32,911 | INFO     | mean x: 1763767004.102102
[2025-11-22 00:06:23] 2025-11-22 05:05:32,911 | INFO     | mean y: 3183155.4804804805
[2025-11-22 00:06:23] 2025-11-22 05:05:32,911 | INFO     | intersect: -18887000333.217175
[2025-11-22 00:06:23] 2025-11-22 05:05:32,912 | INFO     | chi2: 2.5554073673588293
[2025-11-22 00:06:23] 2025-11-22 05:05:32,912 | INFO     | current chi2=2.5554073673588293 (change=15.875171648678183 %)
[2025-11-22 00:06:23] 2025-11-22 05:05:32,912 | INFO     | right removable region: 665
[2025-11-22 00:06:23] 2025-11-22 05:05:32,913 | INFO     | sum of square deviations: 93680052199.35602
[2025-11-22 00:06:23] 2025-11-22 05:05:32,921 | INFO     | sum of deviations: 415686425994.85913
[2025-11-22 00:06:23] 2025-11-22 05:05:32,922 | INFO     | mean x: 1763767461.5976155
[2025-11-22 00:06:23] 2025-11-22 05:05:32,922 | INFO     | mean y: 3172216.536512668
[2025-11-22 00:06:23] 2025-11-22 05:05:32,922 | INFO     | intersect: -7823191829.859459
[2025-11-22 00:06:23] 2025-11-22 05:05:32,923 | INFO     | chi2: 4.508930354977234
[2025-11-22 00:06:23] 2025-11-22 05:05:32,923 | INFO     | current chi2=4.508930354977234 (change=34.68514657838439 %)
[2025-11-22 00:06:23] 2025-11-22 05:05:32,923 | INFO     | sum of square deviations: 91601395671.45903
[2025-11-22 00:06:23] 2025-11-22 05:05:32,932 | INFO     | sum of deviations: 377196137770.4871
[2025-11-22 00:06:23] 2025-11-22 05:05:32,932 | INFO     | mean x: 1763767614.0990992
[2025-11-22 00:06:23] 2025-11-22 05:05:32,932 | INFO     | mean y: 3175038.810810811
[2025-11-22 00:06:23] 2025-11-22 05:05:32,932 | INFO     | intersect: -7259665522.581811
[2025-11-22 00:06:23] 2025-11-22 05:05:32,933 | INFO     | chi2: 4.475079145397373
[2025-11-22 00:06:23] 2025-11-22 05:05:32,933 | INFO     | current chi2=4.475079145397373 (change=0.7507592026231541 %)
[2025-11-22 00:06:23] 2025-11-22 05:05:32,933 | INFO     | left removable region: 20
[2025-11-22 00:06:23] 2025-11-22 05:05:32,934 | INFO     | sum of square deviations: 83206917904.87428
[2025-11-22 00:06:23] 2025-11-22 05:05:32,942 | INFO     | sum of deviations: 690336513273.4658
[2025-11-22 00:06:23] 2025-11-22 05:05:32,942 | INFO     | mean x: 1763767583.6139536
[2025-11-22 00:06:23] 2025-11-22 05:05:32,942 | INFO     | mean y: 3205228.503875969
[2025-11-22 00:06:23] 2025-11-22 05:05:32,942 | INFO     | intersect: -14630111261.945002
[2025-11-22 00:06:23] 2025-11-22 05:05:32,943 | INFO     | chi2: 0.0722910076216585
[2025-11-22 00:06:23] 2025-11-22 05:05:32,943 | INFO     | current memory leak: 8.30 B/s (using 645 data points, chi2=0.07)
[2025-11-22 00:06:23] 2025-11-22 05:05:32,943 | INFO     | could have reported an average CPU frequency of 2386 MHz (26 samples)
[2025-11-22 00:06:23] 2025-11-22 05:05:32,943 | INFO     | ..............................
[2025-11-22 00:06:23] 2025-11-22 05:05:32,944 | INFO     | . Timing measurements:
[2025-11-22 00:06:23] 2025-11-22 05:05:32,944 | INFO     | . get job = 0 s
[2025-11-22 00:06:23] 2025-11-22 05:05:32,944 | INFO     | . initial setup = 2 s
[2025-11-22 00:06:23] 2025-11-22 05:05:32,944 | INFO     | . payload setup = 9 s
[2025-11-22 00:06:23] 2025-11-22 05:05:32,944 | INFO     | . stage-in = 0 s
[2025-11-22 00:06:23] 2025-11-22 05:05:32,944 | INFO     | . payload execution = 41203 s
[2025-11-22 00:06:23] 2025-11-22 05:05:32,944 | INFO     | . stage-out = 3 s
[2025-11-22 00:06:23] 2025-11-22 05:05:32,944 | INFO     | . log creation = 0 s
[2025-11-22 00:06:23] 2025-11-22 05:05:32,944 | INFO     | ..............................
[2025-11-22 00:06:23] 2025-11-22 05:05:33,026 | INFO     | 
[2025-11-22 00:06:23] 2025-11-22 05:05:33,026 | INFO     | job summary report
[2025-11-22 00:06:23] 2025-11-22 05:05:33,026 | INFO     | --------------------------------------------------
[2025-11-22 00:06:23] 2025-11-22 05:05:33,026 | INFO     | PanDA job id: 6893889428
[2025-11-22 00:06:23] 2025-11-22 05:05:33,026 | INFO     | task id: 47523449
[2025-11-22 00:06:23] 2025-11-22 05:05:33,027 | INFO     | errors: (none)
[2025-11-22 00:06:23] 2025-11-22 05:05:33,027 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 00:06:23] 2025-11-22 05:05:33,027 | INFO     | pilot state: finished 
[2025-11-22 00:06:23] 2025-11-22 05:05:33,027 | INFO     | transexitcode: 0
[2025-11-22 00:06:23] 2025-11-22 05:05:33,027 | INFO     | exeerrorcode: 0
[2025-11-22 00:06:23] 2025-11-22 05:05:33,028 | INFO     | exeerrordiag: 
[2025-11-22 00:06:23] 2025-11-22 05:05:33,028 | INFO     | exitcode: 0
[2025-11-22 00:06:23] 2025-11-22 05:05:33,028 | INFO     | exitmsg: OK
[2025-11-22 00:06:23] 2025-11-22 05:05:33,028 | INFO     | cpuconsumptiontime: 320214 s
[2025-11-22 00:06:23] 2025-11-22 05:05:33,028 | INFO     | nevents: 1000
[2025-11-22 00:06:23] 2025-11-22 05:05:33,028 | INFO     | neventsw: 0
[2025-11-22 00:06:23] 2025-11-22 05:05:33,029 | INFO     | pid: 11219
[2025-11-22 00:06:23] 2025-11-22 05:05:33,029 | INFO     | pgrp: 11219
[2025-11-22 00:06:23] 2025-11-22 05:05:33,029 | INFO     | corecount: 8
[2025-11-22 00:06:23] 2025-11-22 05:05:33,029 | INFO     | event service: False
[2025-11-22 00:06:23] 2025-11-22 05:05:33,029 | INFO     | sizes: {0: 2298807, 6: 2299069, 11: 2299097, 41212: 2343138, 41216: 2352132, 41219: 2352188, 41226: 2352562}
[2025-11-22 00:06:23] 2025-11-22 05:05:33,029 | INFO     | --------------------------------------------------
[2025-11-22 00:06:23] 2025-11-22 05:05:33,030 | INFO     | 
[2025-11-22 00:06:23] 2025-11-22 05:05:33,030 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 00:06:23] 2025-11-22 05:05:33,059 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,059 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,062 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 00:06:23] 2025-11-22 05:05:33,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,062 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 00:06:23] 2025-11-22 05:05:33,063 | INFO     | job 6893889428 has completed (purged errors)
[2025-11-22 00:06:23] 2025-11-22 05:05:33,063 | INFO     | overall cleanup function is called
[2025-11-22 00:06:23] 2025-11-22 05:05:34,078 | INFO     | --- collectZombieJob: --- 10, [11219]
[2025-11-22 00:06:23] 2025-11-22 05:05:34,078 | INFO     | zombie collector waiting for pid 11219
[2025-11-22 00:06:23] 2025-11-22 05:05:34,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 00:06:23] 2025-11-22 05:05:34,080 | INFO     | collected zombie processes
[2025-11-22 00:06:23] 2025-11-22 05:05:34,080 | INFO     | will attempt to kill all subprocesses of pid=11219
[2025-11-22 00:06:23] 2025-11-22 05:05:34,166 | INFO     | process IDs to be killed: [11219] (in reverse order)
[2025-11-22 00:06:23] 2025-11-22 05:05:34,222 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 00:06:23] 2025-11-22 05:05:34,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 00:06:23] 2025-11-22 05:05:34,228 | INFO     | did not find any defunct processes belonging to 11219
[2025-11-22 00:06:23] 2025-11-22 05:05:34,231 | INFO     | did not find any defunct processes belonging to 11219
[2025-11-22 00:06:23] 2025-11-22 05:05:34,233 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 00:06:23] 2025-11-22 05:05:34,234 | INFO     | ready for new job
[2025-11-22 00:06:23] 2025-11-22 05:05:34,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 00:06:23] 2025-11-22 05:05:34,237 | INFO     | ***************************************
[2025-11-22 00:06:23] 2025-11-22 05:05:34,237 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 00:06:23] 2025-11-22 05:05:34,237 | INFO     | ***************************************
[2025-11-22 00:06:23] 2025-11-22 05:05:34,237 | INFO     | 
[2025-11-22 00:06:23] 2025-11-22 05:05:34,237 | INFO     | architecture information:
[2025-11-22 00:06:23] 2025-11-22 05:05:34,238 | INFO     | executing command: cat /etc/os-release
[2025-11-22 00:06:23] 2025-11-22 05:05:34,257 | INFO     | cat /etc/os-release:
[2025-11-22 00:06:23] NAME="CentOS Linux"
[2025-11-22 00:06:23] VERSION="7 (Core)"
[2025-11-22 00:06:23] ID="centos"
[2025-11-22 00:06:23] ID_LIKE="rhel fedora"
[2025-11-22 00:06:23] VERSION_ID="7"
[2025-11-22 00:06:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 00:06:23] ANSI_COLOR="0;31"
[2025-11-22 00:06:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 00:06:23] HOME_URL="https://www.centos.org/"
[2025-11-22 00:06:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 00:06:23] 
[2025-11-22 00:06:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 00:06:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 00:06:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 00:06:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 00:06:23] 
[2025-11-22 00:06:23] 2025-11-22 05:05:34,258 | INFO     | ***************************************
[2025-11-22 00:06:23] 2025-11-22 05:05:34,761 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 00:06:23] 2025-11-22 05:05:34,782 | INFO     | sufficient remaining disk space (17464033280 B)
[2025-11-22 00:06:23] 2025-11-22 05:05:34,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 00:06:23] 2025-11-22 05:05:34,783 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 00:06:23] 2025-11-22 05:05:34,783 | INFO     | update_server=False
[2025-11-22 00:06:23] 2025-11-22 05:05:34,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 00:06:23] 2025-11-22 05:05:34,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:06:23] 2025-11-22 05:05:34,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:06:23] 2025-11-22 05:05:34,785 | INFO     | aborting loop
[2025-11-22 00:06:23] 2025-11-22 05:05:35,179 | INFO     | all data control threads have been joined
[2025-11-22 00:06:23] 2025-11-22 05:05:35,261 | INFO     | all payload control threads have been joined
[2025-11-22 00:06:23] 2025-11-22 05:05:35,281 | INFO     | all job control threads have been joined
[2025-11-22 00:06:23] 2025-11-22 05:05:35,789 | INFO     | [job] retrieve thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:35,790 | INFO     | [job] queue monitor thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:35,790 | INFO     | [job] job monitor thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:36,052 | INFO     | [payload] failed_post thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:36,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 00:06:23] 2025-11-22 05:05:36,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 00:06:23] 2025-11-22 05:05:36,185 | INFO     | [data] control thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:36,267 | INFO     | [payload] control thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:36,287 | INFO     | [job] control thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:36,418 | INFO     | [payload] validate_post thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:36,834 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:36,934 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:37,069 | INFO     | [data] copytool_in thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:37,110 | INFO     | [job] validate thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:37,111 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:37,111 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:38,074 | INFO     | [data] copytool_out thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:05:40,118 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 00:06:23] 2025-11-22 05:06:04,621 | INFO     | PID=4778 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 00:06:23] 2025-11-22 05:06:04,622 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 00:06:23] 2025-11-22 05:06:04,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 00:06:23] 2025-11-22 05:06:04,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 00:06:23] 2025-11-22 05:06:17,340 | INFO     | [monitor] cgroup control has ended
[2025-11-22 00:06:23] 2025-11-22 05:06:17,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139807981451072)>', '<ExcThread(monitor, started 139807418214144)>']
[2025-11-22 00:06:23] 2025-11-22 05:06:17,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 00:06:23] 2025-11-22 05:06:17,686 | INFO     | [monitor] control thread has ended
[2025-11-22 00:06:23] 2025-11-22 05:06:22,653 | INFO     | all workflow threads have been joined
[2025-11-22 00:06:23] 2025-11-22 05:06:22,654 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 00:06:23] 2025-11-22 05:06:22,654 | INFO     | traces error code: 0
[2025-11-22 00:06:23] 2025-11-22 05:06:22,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 00:06:23] 2025-11-22 05:06:22,767 [wrapper] ==== pilot stdout END ====
[2025-11-22 00:06:23] 2025-11-22 05:06:22,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 00:06:23] 2025-11-22 05:06:22,777 [wrapper] pilotpid: 4778
[2025-11-22 00:06:23] 2025-11-22 05:06:22,782 [wrapper] Pilot exit status: 0
[2025-11-22 00:06:23] 2025-11-22 05:06:22,800 [wrapper] pandaids: 6893889428
[2025-11-22 00:06:23] 2025-11-22 05:06:22,856 [wrapper] cleanup supervisor_pilot 22964 4779
[2025-11-22 00:06:23] 2025-11-22 05:06:22,861 [wrapper] Test setup, not cleaning
[2025-11-22 00:06:23] 2025-11-22 05:06:22,866 [wrapper] apfmon messages muted
[2025-11-22 00:06:23] 2025-11-22 05:06:22,871 [wrapper] ==== wrapper stdout END ====
[2025-11-22 00:06:23] 2025-11-22 05:06:22,876 [wrapper] ==== wrapper stderr END ====
[2025-11-22 00:06:23]  *** Error codes and diagnostics ***
[2025-11-22 00:06:23]     "exeErrorCode": 0,
[2025-11-22 00:06:23]     "exeErrorDiag": "",
[2025-11-22 00:06:23]     "pilotErrorCode": 0,
[2025-11-22 00:06:23]     "pilotErrorDiag": "",
[2025-11-22 00:06:23]  *** Listing of results directory ***
[2025-11-22 00:06:23] total 1322664
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 18:11 pilot3.tar.gz
[2025-11-22 00:06:23] -rwx------ 1 boincer umatlas     36292 Nov 20 18:53 runpilot2-wrapper.sh
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 18:53 queuedata.json
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas       100 Nov 21 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 00:06:23] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 12:37 run_atlas
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas       105 Nov 21 12:37 job.xml
[2025-11-22 00:06:23] -rw-r--r-- 2 boincer umatlas 411317288 Nov 21 12:37 EVNT.47493127._000990.pool.root.1
[2025-11-22 00:06:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 12:37 start_atlas.sh
[2025-11-22 00:06:23] drwxrwx--x 2 boincer umatlas      4096 Nov 21 12:37 shared
[2025-11-22 00:06:23] -rw-r--r-- 2 boincer umatlas    590099 Nov 21 12:37 input.tar.gz
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas         0 Nov 21 12:37 boinc_lockfile
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas      2786 Nov 21 12:37 pandaJob.out
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas        57 Nov 21 12:37 setup.sh.local
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas    989798 Nov 21 12:38 agis_schedconf.cvmfs.json
[2025-11-22 00:06:23] drwx------ 5 boincer umatlas      4096 Nov 21 12:38 pilot3
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas       533 Nov 21 23:54 boinc_task_state.xml
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas      5910 Nov 22 00:01 init_data.xml
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas 923928199 Nov 22 00:04 HITS.47523449._009900.pool.root.1
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas      1064 Nov 22 00:05 memory_monitor_summary.json
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas   1526164 Nov 22 00:05 agis_ddmendpoints.agis.ALL.json
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas   1930295 Nov 22 00:05 log.47523449._009900.job.log.tgz.1
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas      8659 Nov 22 00:05 heartbeat.json
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas        29 Nov 22 00:05 wrapper_checkpoint.txt
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 00:05 boinc_mmap_file
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas        95 Nov 22 00:06 pilot_heartbeat.json
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas      4745 Nov 22 00:06 pilotlog.txt
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas   5686265 Nov 22 00:06 log.47523449._009900.job.log.1
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas       353 Nov 22 00:06 output.list
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas       620 Nov 22 00:06 runtime_log
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas   7639040 Nov 22 00:06 result.tar.gz
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas       667 Nov 22 00:06 VNVNDm7dTg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuAHKDm8YF7Qm.diag
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas      9338 Nov 22 00:06 runtime_log.err
[2025-11-22 00:06:23] -rw-r--r-- 1 boincer umatlas     21290 Nov 22 00:06 stderr.txt
[2025-11-22 00:06:23] HITS file was successfully produced:
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas 923928199 Nov 22 00:04 shared/HITS.pool.root.1
[2025-11-22 00:06:23]  *** Contents of shared directory: ***
[2025-11-22 00:06:23] total 1312016
[2025-11-22 00:06:23] -rw-r--r-- 2 boincer umatlas 411317288 Nov 21 12:37 ATLAS.root_0
[2025-11-22 00:06:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 12:37 start_atlas.sh
[2025-11-22 00:06:23] -rw-r--r-- 2 boincer umatlas    590099 Nov 21 12:37 input.tar.gz
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas 923928199 Nov 22 00:04 HITS.pool.root.1
[2025-11-22 00:06:23] -rw------- 1 boincer umatlas   7639040 Nov 22 00:06 result.tar.gz
00:06:24 (839): run_atlas exited; CPU time 318294.561328
00:06:24 (839): called boinc_finish(0)

</stderr_txt>
]]>

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