Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 02:11:12 (80868): vboxwrapper version 26210
2025-11-25 02:11:12 (80868): BOINC client version: 8.2.4
2025-11-25 02:11:12 (80868): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2025-11-25 02:11:13 (80868): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 02:11:13 (80868): Create VM. (boinc_24e10883d240d83a, slot#0)
2025-11-25 02:11:13 (80868): Setting Memory Size for VM. (4800MB)
2025-11-25 02:11:14 (80868): Setting CPU Count for VM. (8)
2025-11-25 02:11:14 (80868): Setting Chipset Options for VM.
2025-11-25 02:11:14 (80868): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 02:11:14 (80868): Setting Boot Options for VM.
2025-11-25 02:11:15 (80868): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 02:11:15 (80868): Enabling VM Network Access.
2025-11-25 02:11:15 (80868): Disabling USB Support for VM.
2025-11-25 02:11:16 (80868): Disabling COM Port Support for VM.
2025-11-25 02:11:16 (80868): Disabling LPT Port Support for VM.
2025-11-25 02:11:16 (80868): Disabling Audio Support for VM.
2025-11-25 02:11:16 (80868): Disabling Clipboard Support for VM.
2025-11-25 02:11:17 (80868): Disabling Drag and Drop Support for VM.
2025-11-25 02:11:17 (80868): Adding storage controller(s) to VM.
2025-11-25 02:11:17 (80868): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 02:11:18 (80868): Adding VirtualBox Guest Additions to VM.
2025-11-25 02:11:18 (80868): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 02:11:18 (80868): forwarding host port 54583 to guest port 80
2025-11-25 02:11:18 (80868): Enabling remote desktop for VM.
2025-11-25 02:11:19 (80868): Enabling shared directory for VM.
2025-11-25 02:11:20 (80868): Starting VM using VBoxManage interface. (boinc_24e10883d240d83a, slot#0)
2025-11-25 02:11:26 (80868): Successfully started VM. (PID = '110832')
2025-11-25 02:11:26 (80868): Reporting VM Process ID to BOINC.
2025-11-25 02:11:26 (80868): Guest Log: BIOS: VirtualBox 7.2.4
2025-11-25 02:11:26 (80868): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 02:11:26 (80868): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 02:11:26 (80868): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 02:11:26 (80868): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 02:11:26 (80868): Detected: Web Application Enabled (http://localhost:54583)
2025-11-25 02:11:26 (80868): Detected: Remote Desktop Enabled (localhost:54584)
2025-11-25 02:11:26 (80868): Preference change detected
2025-11-25 02:11:26 (80868): Setting CPU throttle for VM. (100%)
2025-11-25 02:11:26 (80868): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 02:11:28 (80868): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 02:11:28 (80868): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 02:11:31 (80868): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 02:11:31 (80868): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 02:11:31 (80868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 02:12:01 (80868): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 02:12:01 (80868): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-25 02:12:07 (80868): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 02:12:07 (80868): Guest Log: 00:00:00.000154 main     Log opened 2025-11-25T02:12:05.219332000Z
2025-11-25 02:12:07 (80868): Guest Log: 00:00:00.000272 main     OS Product: Linux
2025-11-25 02:12:07 (80868): Guest Log: 00:00:00.000308 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 02:12:07 (80868): Guest Log: 00:00:00.000336 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 02:12:07 (80868): Guest Log: 00:00:00.000363 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 02:12:07 (80868): Guest Log: 00:00:00.000364 main     Process ID: 1370
2025-11-25 02:12:07 (80868): Guest Log: 00:00:00.000364 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 02:12:07 (80868): Guest Log: 00:00:00.001692 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 02:12:07 (80868): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 02:12:07 (80868): Guest Log: [INFO] Mounting shared directory
2025-11-25 02:12:07 (80868): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 02:12:14 (80868): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 02:12:14 (80868): Guest Log: [INFO] Detected branch: prod
2025-11-25 02:12:14 (80868): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 02:12:14 (80868): Guest Log: Copying input files
2025-11-25 02:12:16 (80868): Guest Log: Copied input files into RunAtlas.
2025-11-25 02:12:16 (80868): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 02:12:16 (80868): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 02:12:16 (80868): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 02:12:16 (80868): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 02:12:17 (80868): Guest Log: 00:00:10.005421 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 583 534 969 000ns (GuestNow=1 764 058 308 758 255 000 ns GuestLast=1 764 036 725 223 286 000 ns fSetTimeLastLoop=true )
2025-11-25 02:12:24 (80868): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 02:12:24 (80868): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 02:12:24 (80868): Guest Log: 2.6.3.0 1651 0 32228 153275 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 02:12:24 (80868): Guest Log: copied the webapp to /var/www
2025-11-25 02:12:24 (80868): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-25 02:12:24 (80868): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-25 02:12:25 (80868): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 02:12:25 (80868): Guest Log:  *** Starting ATLAS job. (PandaID=6891601678 taskID=47493068) ***
2025-11-25 03:51:46 (80868): Status Report: Elapsed Time: '6000.643370'
2025-11-25 03:51:46 (80868): Status Report: CPU Time: '44191.921875'
2025-11-25 05:31:52 (80868): Status Report: Elapsed Time: '12000.643370'
2025-11-25 05:31:52 (80868): Status Report: CPU Time: '91879.578125'
2025-11-25 07:12:13 (80868): Status Report: Elapsed Time: '18000.643370'
2025-11-25 07:12:13 (80868): Status Report: CPU Time: '139759.421875'
2025-11-25 08:52:36 (80868): Status Report: Elapsed Time: '24000.643370'
2025-11-25 08:52:36 (80868): Status Report: CPU Time: '187655.515625'
2025-11-25 09:16:29 (80868): VM state change detected. (old = 'running', new = 'paused')
2025-11-25 09:19:50 (80868): VM state change detected. (old = 'paused', new = 'running')
2025-11-25 10:36:12 (80868): Status Report: Elapsed Time: '30000.643370'
2025-11-25 10:36:12 (80868): Status Report: CPU Time: '235498.718750'
2025-11-25 12:16:31 (80868): Status Report: Elapsed Time: '36000.643370'
2025-11-25 12:16:31 (80868): Status Report: CPU Time: '281657.015625'
2025-11-25 12:19:26 (80868): Guest Log:  *** Job finished ***
2025-11-25 12:19:26 (80868): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:28,413 | INFO     | all workflow threads have been joined
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:28,413 | INFO     | end of generic workflow (traces error code: 0)
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:28,413 | INFO     | traces error code: 0
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:28,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,120 | INFO     | PID=6065 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,121 | INFO     | found 0 job(s) in 20 queues
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,121 | INFO     | [monitor] control thread has ended
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,254 [wrapper] ==== pilot stdout END ====
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,257 [wrapper] ==== wrapper stdout RESUME ====
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,260 [wrapper] pilotpid: 6065
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,264 [wrapper] Pilot exit status: 0
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,279 [wrapper] pandaids: 6891601678
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,305 [wrapper] cleanup supervisor_pilot 20389 6066
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,310 [wrapper] Test setup, not cleaning
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,314 [wrapper] apfmon messages muted
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,318 [wrapper] ==== wrapper stdout END ====
2025-11-25 12:19:26 (80868): Guest Log: 2025-11-25 18:15:41,322 [wrapper] ==== wrapper stderr END ====
2025-11-25 12:19:26 (80868): Guest Log:  *** Error codes and diagnostics ***
2025-11-25 12:19:26 (80868): Guest Log:     "exeErrorCode": 0,
2025-11-25 12:19:26 (80868): Guest Log:     "exeErrorDiag": "",
2025-11-25 12:19:26 (80868): Guest Log:     "pilotErrorCode": 0,
2025-11-25 12:19:26 (80868): Guest Log:     "pilotErrorDiag": "",
2025-11-25 12:19:26 (80868): Guest Log:  *** Listing of results directory ***
2025-11-25 12:19:26 (80868): Guest Log: total 917988
2025-11-25 12:19:26 (80868): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 18 18:50 pilot3.tar.gz
2025-11-25 12:19:26 (80868): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 18 19:15 queuedata.json
2025-11-25 12:19:26 (80868): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 18 19:17 runpilot2-wrapper.sh
2025-11-25 12:19:26 (80868): Guest Log: -rwxr-xr-x. 1 atlas atlas      8666 Nov 25 08:11 init_data.xml
2025-11-25 12:19:26 (80868): Guest Log: -rwxr-xr-x. 1 atlas atlas    590096 Nov 25 08:11 input.tar.gz
2025-11-25 12:19:26 (80868): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Nov 25 08:11 start_atlas.sh
2025-11-25 12:19:26 (80868): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 25 08:11 EVNT.47493065._000844.pool.root.1 -> /data/./ATLAS.root_0
2025-11-25 12:19:26 (80868): Guest Log: -rw-r--r--. 1 atlas atlas      2773 Nov 25 08:11 pandaJob.out
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas    991830 Nov 25 08:12 agis_schedconf.cvmfs.json
2025-11-25 12:19:26 (80868): Guest Log: drwx------. 5 atlas atlas      4096 Nov 25 08:12 pilot3
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas 922909156 Nov 25 18:14 HITS.47493068._007082.pool.root.1
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 25 18:14 memory_monitor_summary.json
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 25 18:15 agis_ddmendpoints.agis.ALL.json
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas   1852159 Nov 25 18:15 log.47493068._007082.job.log.tgz.1
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas      8641 Nov 25 18:15 heartbeat.json
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas        95 Nov 25 18:15 pilot_heartbeat.json
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas       744 Nov 25 18:15 pilotlog.txt
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas   4779116 Nov 25 18:15 log.47493068._007082.job.log.1
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas       353 Nov 25 18:15 output.list
2025-11-25 12:19:26 (80868): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 25 18:15 runtime_log
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas   6656000 Nov 25 18:15 result.tar.gz
2025-11-25 12:19:26 (80868): Guest Log: -rw-r--r--. 1 atlas atlas      8670 Nov 25 18:15 runtime_log.err
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas       671 Nov 25 18:15 FVhNDmdNgf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5QGKDmhoKIEn.diag
2025-11-25 12:19:26 (80868): Guest Log: Looking for outputfile HITS.47493068._007082.pool.root.1
2025-11-25 12:19:26 (80868): Guest Log: HITS file was successfully produced
2025-11-25 12:19:26 (80868): Guest Log: -rw-------. 1 atlas atlas 922909156 Nov 25 18:14 /home/atlas/RunAtlas/HITS.47493068._007082.pool.root.1
2025-11-25 12:19:29 (80868): Guest Log: Successfully finished the ATLAS job!
2025-11-25 12:19:29 (80868): Guest Log: Copying the results back to the shared directory!
2025-11-25 12:19:29 (80868): Guest Log:  *** Contents of shared directory: ***
2025-11-25 12:19:29 (80868): Guest Log: total 1307764
2025-11-25 12:19:29 (80868): Guest Log: -rwxrwxrwx. 1 root root 408957850 Nov 25 08:11 ATLAS.root_0
2025-11-25 12:19:29 (80868): Guest Log: -rwxrwxrwx. 1 root root 922909156 Nov 25  2025 HITS.pool.root.1
2025-11-25 12:19:29 (80868): Guest Log: -rwxrwxrwx. 1 root root      8666 Nov 25 08:11 init_data.xml
2025-11-25 12:19:29 (80868): Guest Log: -rwxrwxrwx. 1 root root    590096 Nov 21 11:52 input.tar.gz
2025-11-25 12:19:29 (80868): Guest Log: -rwxrwxrwx. 1 root root   6656000 Nov 25  2025 result.tar.gz
2025-11-25 12:19:29 (80868): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 21 11:52 start_atlas.sh
2025-11-25 12:19:29 (80868): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-25 12:19:29 (80868): VM Completion File Detected.
2025-11-25 12:19:29 (80868): Powering off VM.
2025-11-25 12:19:30 (80868): Successfully stopped VM.
2025-11-25 12:19:30 (80868): Deregistering VM. (boinc_24e10883d240d83a, slot#0)
2025-11-25 12:19:30 (80868): Removing network bandwidth throttle group from VM.
2025-11-25 12:19:30 (80868): Removing VM from VirtualBox.
2025-11-25 12:19:36 (80868): called boinc_finish(0)

</stderr_txt>
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