Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:33:42 (2623332): wrapper (7.7.26015): starting
05:33:42 (2623332): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 05:33:42] Arguments: --nthreads 3
[2025-11-24 05:33:42] Threads: 3
[2025-11-24 05:33:42] Checking for CVMFS
[2025-11-24 05:33:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:33:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:33:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:33:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:33:42] 2.9.2.0 1502042 8517 72388 153233 0 81 35070094 36864001 0 130560 0 3041313 99.823 560540 6887 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 05:33:42] CVMFS is ok
[2025-11-24 05:33:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 05:33:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 05:33:42] Further information can be found at the LHC@home message board.
[2025-11-24 05:33:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:33:42] Checking for apptainer binary...
[2025-11-24 05:33:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 05:33:42] Running /usr/bin/apptainer --version
[2025-11-24 05:33:42] apptainer version 1.4.1-1.1
[2025-11-24 05:33:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:33:42] atlasA223a
[2025-11-24 05:33:42] apptainer works
[2025-11-24 05:33:42] Set ATHENA_PROC_NUMBER=3
[2025-11-24 05:33:42] Set ATHENA_CORE_NUMBER=3
[2025-11-24 05:33:42] Starting ATLAS job with PandaID=6891589552
[2025-11-24 05:33:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 14:19:54]  *** The last 200 lines of the pilot log: ***
[2025-11-24 14:19:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 14:19:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 14:19:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 14:19:54] 
[2025-11-24 14:19:54] 2025-11-24 13:19:23,250 | INFO     | ***************************************
[2025-11-24 14:19:54] 2025-11-24 13:19:23,753 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 14:19:54] 2025-11-24 13:19:23,766 | INFO     | sufficient remaining disk space (321935900672 B)
[2025-11-24 14:19:54] 2025-11-24 13:19:23,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 14:19:54] 2025-11-24 13:19:23,767 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 14:19:54] 2025-11-24 13:19:23,767 | INFO     | update_server=False
[2025-11-24 14:19:54] 2025-11-24 13:19:23,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 14:19:54] 2025-11-24 13:19:23,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:19:54] 2025-11-24 13:19:23,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:19:54] 2025-11-24 13:19:23,767 | INFO     | aborting loop
[2025-11-24 14:19:54] 2025-11-24 13:19:23,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 14:19:54] 2025-11-24 13:19:23,970 | INFO     | all data control threads have been joined
[2025-11-24 14:19:54] 2025-11-24 13:19:24,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 14:19:54] 2025-11-24 13:19:24,290 | INFO     | all job control threads have been joined
[2025-11-24 14:19:54] 2025-11-24 13:19:24,678 | INFO     | all payload control threads have been joined
[2025-11-24 14:19:54] 2025-11-24 13:19:24,773 | INFO     | [job] retrieve thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:24,774 | INFO     | [job] queue monitor thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:24,774 | INFO     | [job] job monitor thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:24,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:24,967 | INFO     | [payload] validate_post thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:24,976 | INFO     | [data] control thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:25,004 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:25,296 | INFO     | [job] control thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:25,394 | INFO     | [payload] failed_post thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:25,649 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:25,650 | INFO     | [data] copytool_in thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:25,682 | INFO     | [payload] control thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:25,683 | INFO     | [job] validate thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:25,773 | INFO     | [data] copytool_out thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:25,952 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:28,061 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 14:19:54] 2025-11-24 13:19:36,291 | INFO     | [monitor] cgroup control has ended
[2025-11-24 14:19:54] 2025-11-24 13:19:36,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660362696512)>', '<ExcThread(monitor, started 140659415566080)>']
[2025-11-24 14:19:54] 2025-11-24 13:19:41,927 | INFO     | all workflow threads have been joined
[2025-11-24 14:19:54] 2025-11-24 13:19:41,927 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 14:19:54] 2025-11-24 13:19:41,928 | INFO     | traces error code: 0
[2025-11-24 14:19:54] 2025-11-24 13:19:41,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 14:19:54] 2025-11-24 13:19:54,353 | INFO     | PID=2627059 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 14:19:54] 2025-11-24 13:19:54,353 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 14:19:54] 2025-11-24 13:19:54,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 14:19:54] 2025-11-24 13:19:54,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 14:19:54] 2025-11-24 13:19:54,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 14:19:54] 2025-11-24 13:19:54,353 | INFO     | [monitor] control thread has ended
[2025-11-24 14:19:54] 2025-11-24 13:19:54,400 [wrapper] ==== pilot stdout END ====
[2025-11-24 14:19:54] 2025-11-24 13:19:54,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 14:19:54] 2025-11-24 13:19:54,406 [wrapper] pilotpid: 2627059
[2025-11-24 14:19:54] 2025-11-24 13:19:54,409 [wrapper] Pilot exit status: 0
[2025-11-24 14:19:54] 2025-11-24 13:19:54,417 [wrapper] pandaids: 6891589552
[2025-11-24 14:19:54] 2025-11-24 13:19:54,435 [wrapper] cleanup supervisor_pilot 2690892 2627060
[2025-11-24 14:19:54] 2025-11-24 13:19:54,439 [wrapper] Test setup, not cleaning
[2025-11-24 14:19:54] 2025-11-24 13:19:54,441 [wrapper] apfmon messages muted
[2025-11-24 14:19:54] 2025-11-24 13:19:54,444 [wrapper] ==== wrapper stdout END ====
[2025-11-24 14:19:54] 2025-11-24 13:19:54,446 [wrapper] ==== wrapper stderr END ====
[2025-11-24 14:19:54]  *** Error codes and diagnostics ***
[2025-11-24 14:19:54]     "exeErrorCode": 0,
[2025-11-24 14:19:54]     "exeErrorDiag": "",
[2025-11-24 14:19:54]     "pilotErrorCode": 0,
[2025-11-24 14:19:54]     "pilotErrorDiag": "",
[2025-11-24 14:19:54]  *** Listing of results directory ***
[2025-11-24 14:19:54] total 1306316
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:46 pilot3.tar.gz
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:54 queuedata.json
[2025-11-24 14:19:54] -rwx------ 1 boinc boinc     36292 Nov 18 18:55 runpilot2-wrapper.sh
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc       100 Nov 24 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 14:19:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 05:33 run_atlas
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc       105 Nov 24 05:33 job.xml
[2025-11-24 14:19:54] -rw-r--r-- 2 boinc boinc 408806340 Nov 24 05:33 EVNT.47493065._000539.pool.root.1
[2025-11-24 14:19:54] -rw-r--r-- 2 boinc boinc    590103 Nov 24 05:33 input.tar.gz
[2025-11-24 14:19:54] -rw-r--r-- 2 boinc boinc     15120 Nov 24 05:33 start_atlas.sh
[2025-11-24 14:19:54] drwxrwx--x 2 boinc boinc      4096 Nov 24 05:33 shared
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc         0 Nov 24 05:33 boinc_setup_complete
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc      6198 Nov 24 05:33 init_data.xml
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc         0 Nov 24 05:33 boinc_lockfile
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc      2772 Nov 24 05:33 pandaJob.out
[2025-11-24 14:19:54] -rw------- 1 boinc boinc    989786 Nov 24 05:33 agis_schedconf.cvmfs.json
[2025-11-24 14:19:54] drwx------ 5 boinc boinc      4096 Nov 24 05:33 pilot3
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc       531 Nov 24 14:15 boinc_task_state.xml
[2025-11-24 14:19:54] -rw------- 1 boinc boinc 913700186 Nov 24 14:18 HITS.47493068._005383.pool.root.1
[2025-11-24 14:19:54] -rw------- 1 boinc boinc      1022 Nov 24 14:19 memory_monitor_summary.json
[2025-11-24 14:19:54] -rw------- 1 boinc boinc   1516227 Nov 24 14:19 agis_ddmendpoints.agis.ALL.json
[2025-11-24 14:19:54] -rw------- 1 boinc boinc   1198065 Nov 24 14:19 log.47493068._005383.job.log.tgz.1
[2025-11-24 14:19:54] -rw------- 1 boinc boinc      8583 Nov 24 14:19 heartbeat.json
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc        28 Nov 24 14:19 wrapper_checkpoint.txt
[2025-11-24 14:19:54] -rw------- 1 boinc boinc       747 Nov 24 14:19 pilotlog.txt
[2025-11-24 14:19:54] -rw------- 1 boinc boinc        95 Nov 24 14:19 pilot_heartbeat.json
[2025-11-24 14:19:54] -rw------- 1 boinc boinc   4434871 Nov 24 14:19 log.47493068._005383.job.log.1
[2025-11-24 14:19:54] -rw------- 1 boinc boinc       353 Nov 24 14:19 output.list
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc      8192 Nov 24 14:19 boinc_mmap_file
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc       620 Nov 24 14:19 runtime_log
[2025-11-24 14:19:54] -rw------- 1 boinc boinc   5652480 Nov 24 14:19 result.tar.gz
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc      8798 Nov 24 14:19 runtime_log.err
[2025-11-24 14:19:54] -rw------- 1 boinc boinc       669 Nov 24 14:19 FVrMDmW6ef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmldFKDm0C6J6n.diag
[2025-11-24 14:19:54] -rw-r--r-- 1 boinc boinc      8158 Nov 24 14:19 stderr.txt
[2025-11-24 14:19:54] HITS file was successfully produced:
[2025-11-24 14:19:54] -rw------- 1 boinc boinc 913700186 Nov 24 14:18 shared/HITS.pool.root.1
[2025-11-24 14:19:54]  *** Contents of shared directory: ***
[2025-11-24 14:19:54] total 1297640
[2025-11-24 14:19:54] -rw-r--r-- 2 boinc boinc 408806340 Nov 24 05:33 ATLAS.root_0
[2025-11-24 14:19:54] -rw-r--r-- 2 boinc boinc    590103 Nov 24 05:33 input.tar.gz
[2025-11-24 14:19:54] -rw-r--r-- 2 boinc boinc     15120 Nov 24 05:33 start_atlas.sh
[2025-11-24 14:19:54] -rw------- 1 boinc boinc 913700186 Nov 24 14:18 HITS.pool.root.1
[2025-11-24 14:19:54] -rw------- 1 boinc boinc   5652480 Nov 24 14:19 result.tar.gz
14:20:16 (2623332): run_atlas exited; CPU time 93132.023338
14:20:16 (2623332): called boinc_finish(0)

</stderr_txt>
]]>

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