Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:30:13 (1362408): wrapper (7.7.26015): starting
07:30:13 (1362408): wrapper: running run_atlas (--nthreads 10)
[2025-11-21 07:30:13] Arguments: --nthreads 10
[2025-11-21 07:30:13] Threads: 10
[2025-11-21 07:30:13] Checking for CVMFS
[2025-11-21 07:30:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 07:30:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 07:30:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 07:30:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 07:30:13] 2.13.2.0 10847 28640 190560 153125 2 67 38308991 40960000 5043 16776704 0 23322563 99.714 15556213 38385 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 07:30:13] CVMFS is ok
[2025-11-21 07:30:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 07:30:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 07:30:13] Further information can be found at the LHC@home message board.
[2025-11-21 07:30:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 07:30:13] Checking for apptainer binary...
[2025-11-21 07:30:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 07:30:13] Running /usr/bin/apptainer --version
[2025-11-21 07:30:13] apptainer version 1.4.4-1.el9
[2025-11-21 07:30:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 07:30:13] c-210-35-4.aglt2.org
[2025-11-21 07:30:13] apptainer works
[2025-11-21 07:30:13] Set ATHENA_PROC_NUMBER=10
[2025-11-21 07:30:13] Set ATHENA_CORE_NUMBER=10
[2025-11-21 07:30:13] Starting ATLAS job with PandaID=6893874871
[2025-11-21 07:30:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 00:00:06]  *** The last 200 lines of the pilot log: ***
[2025-11-22 00:00:06] 2025-11-22 04:38:08,248 | INFO     | fitting pss+swap vs Time
[2025-11-22 00:00:06] 2025-11-22 04:38:08,250 | INFO     | sum of square deviations: 266744387647.09158
[2025-11-22 00:00:06] 2025-11-22 04:38:08,274 | INFO     | sum of deviations: 1469245369349.6055
[2025-11-22 00:00:06] 2025-11-22 04:38:08,274 | INFO     | mean x: 1763757230.1293375
[2025-11-22 00:00:06] 2025-11-22 04:38:08,274 | INFO     | mean y: 3306760.7917981073
[2025-11-22 00:00:06] 2025-11-22 04:38:08,275 | INFO     | intersect: -9711582335.404976
[2025-11-22 00:00:06] 2025-11-22 04:38:08,276 | INFO     | chi2: 11.090633810695948
[2025-11-22 00:00:06] 2025-11-22 04:38:08,278 | INFO     | sum of square deviations: 262561649635.7544
[2025-11-22 00:00:06] 2025-11-22 04:38:08,300 | INFO     | sum of deviations: 1836770766264.0317
[2025-11-22 00:00:06] 2025-11-22 04:38:08,300 | INFO     | mean x: 1763757077.6617336
[2025-11-22 00:00:06] 2025-11-22 04:38:08,301 | INFO     | mean y: 3320154.7938689217
[2025-11-22 00:00:06] 2025-11-22 04:38:08,301 | INFO     | intersect: -12335181844.773079
[2025-11-22 00:00:06] 2025-11-22 04:38:08,302 | INFO     | chi2: 7.79964061273153
[2025-11-22 00:00:06] 2025-11-22 04:38:08,302 | INFO     | current chi2=7.79964061273153 (change=29.673625999539745 %)
[2025-11-22 00:00:06] 2025-11-22 04:38:08,304 | INFO     | sum of square deviations: 258422912447.4112
[2025-11-22 00:00:06] 2025-11-22 04:38:08,326 | INFO     | sum of deviations: 2222685550379.626
[2025-11-22 00:00:06] 2025-11-22 04:38:08,327 | INFO     | mean x: 1763756925.194474
[2025-11-22 00:00:06] 2025-11-22 04:38:08,327 | INFO     | mean y: 3334373.390010627
[2025-11-22 00:00:06] 2025-11-22 04:38:08,327 | INFO     | intersect: -15166671238.281626
[2025-11-22 00:00:06] 2025-11-22 04:38:08,329 | INFO     | chi2: 4.308325460147982
[2025-11-22 00:00:06] 2025-11-22 04:38:08,329 | INFO     | current chi2=4.308325460147982 (change=44.76251311995831 %)
[2025-11-22 00:00:06] 2025-11-22 04:38:08,331 | INFO     | sum of square deviations: 254327771958.88464
[2025-11-22 00:00:06] 2025-11-22 04:38:08,374 | INFO     | sum of deviations: 2476373474618.045
[2025-11-22 00:00:06] 2025-11-22 04:38:08,375 | INFO     | mean x: 1763756772.724359
[2025-11-22 00:00:06] 2025-11-22 04:38:08,375 | INFO     | mean y: 3343808.949786325
[2025-11-22 00:00:06] 2025-11-22 04:38:08,375 | INFO     | intersect: -17170244643.508438
[2025-11-22 00:00:06] 2025-11-22 04:38:08,376 | INFO     | chi2: 2.4896853480342727
[2025-11-22 00:00:06] 2025-11-22 04:38:08,376 | INFO     | current chi2=2.4896853480342727 (change=42.212226744152304 %)
[2025-11-22 00:00:06] 2025-11-22 04:38:08,377 | INFO     | sum of square deviations: 250275766223.17917
[2025-11-22 00:00:06] 2025-11-22 04:38:08,467 | INFO     | sum of deviations: 2566264293834.2944
[2025-11-22 00:00:06] 2025-11-22 04:38:08,467 | INFO     | mean x: 1763756620.2470462
[2025-11-22 00:00:06] 2025-11-22 04:38:08,468 | INFO     | mean y: 3347189.1987110632
[2025-11-22 00:00:06] 2025-11-22 04:38:08,468 | INFO     | intersect: -18081766307.237965
[2025-11-22 00:00:06] 2025-11-22 04:38:08,469 | INFO     | chi2: 2.1629964229469456
[2025-11-22 00:00:06] 2025-11-22 04:38:08,469 | INFO     | current chi2=2.1629964229469456 (change=13.121695291546132 %)
[2025-11-22 00:00:06] 2025-11-22 04:38:08,469 | INFO     | right removable region: 930
[2025-11-22 00:00:06] 2025-11-22 04:38:08,486 | INFO     | sum of square deviations: 262558209624.39743
[2025-11-22 00:00:06] 2025-11-22 04:38:08,579 | INFO     | sum of deviations: 1211915215885.4504
[2025-11-22 00:00:06] 2025-11-22 04:38:08,580 | INFO     | mean x: 1763757382.6596193
[2025-11-22 00:00:06] 2025-11-22 04:38:08,580 | INFO     | mean y: 3316121.4175475687
[2025-11-22 00:00:06] 2025-11-22 04:38:08,580 | INFO     | intersect: -8137828702.175379
[2025-11-22 00:00:06] 2025-11-22 04:38:08,581 | INFO     | chi2: 9.320651497286335
[2025-11-22 00:00:06] 2025-11-22 04:38:08,581 | INFO     | current chi2=9.320651497286335 (change=15.959253038384697 %)
[2025-11-22 00:00:06] 2025-11-22 04:38:08,581 | INFO     | left removable region: 10
[2025-11-22 00:00:06] 2025-11-22 04:38:08,582 | INFO     | sum of square deviations: 241507554964.17267
[2025-11-22 00:00:06] 2025-11-22 04:38:08,679 | INFO     | sum of deviations: 2228087629541.656
[2025-11-22 00:00:06] 2025-11-22 04:38:08,680 | INFO     | mean x: 1763756894.8054347
[2025-11-22 00:00:06] 2025-11-22 04:38:08,680 | INFO     | mean y: 3360503.1489130436
[2025-11-22 00:00:06] 2025-11-22 04:38:08,680 | INFO     | intersect: -16268614588.55277
[2025-11-22 00:00:06] 2025-11-22 04:38:08,681 | INFO     | chi2: 0.27089011240043404
[2025-11-22 00:00:06] 2025-11-22 04:38:08,681 | INFO     | current memory leak: 9.23 B/s (using 920 data points, chi2=0.27)
[2025-11-22 00:00:06] 2025-11-22 04:38:08,698 | INFO     | monitor loop #3573: job 0:6893874871 is in state 'finished'
[2025-11-22 00:00:06] 2025-11-22 04:38:08,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:00:06] 2025-11-22 04:38:08,701 | INFO     | could have reported an average CPU frequency of 2940 MHz (35 samples)
[2025-11-22 00:00:06] 2025-11-22 04:38:08,702 | INFO     | ..............................
[2025-11-22 00:00:06] 2025-11-22 04:38:08,702 | INFO     | . Timing measurements:
[2025-11-22 00:00:06] 2025-11-22 04:38:08,702 | INFO     | . get job = 0 s
[2025-11-22 00:00:06] 2025-11-22 04:38:08,702 | INFO     | . initial setup = 2 s
[2025-11-22 00:00:06] 2025-11-22 04:38:08,702 | INFO     | . payload setup = 5 s
[2025-11-22 00:00:06] 2025-11-22 04:38:08,702 | INFO     | . stage-in = 0 s
[2025-11-22 00:00:06] 2025-11-22 04:38:08,702 | INFO     | . payload execution = 57996 s
[2025-11-22 00:00:06] 2025-11-22 04:38:08,706 | INFO     | . stage-out = 7 s
[2025-11-22 00:00:06] 2025-11-22 04:38:08,706 | INFO     | . log creation = 1 s
[2025-11-22 00:00:06] 2025-11-22 04:38:08,709 | INFO     | ..............................
[2025-11-22 00:00:06] 2025-11-22 04:38:09,069 | INFO     | 
[2025-11-22 00:00:06] 2025-11-22 04:38:09,069 | INFO     | job summary report
[2025-11-22 00:00:06] 2025-11-22 04:38:09,069 | INFO     | --------------------------------------------------
[2025-11-22 00:00:06] 2025-11-22 04:38:09,069 | INFO     | PanDA job id: 6893874871
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | task id: 47523449
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | errors: (none)
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | pilot state: finished 
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | transexitcode: 0
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | exeerrorcode: 0
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | exeerrordiag: 
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | exitcode: 0
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | exitmsg: OK
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | cpuconsumptiontime: 231605 s
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | nevents: 1000
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | neventsw: 0
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | pid: 1372430
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | pgrp: 1372430
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | corecount: 10
[2025-11-22 00:00:06] 2025-11-22 04:38:09,070 | INFO     | event service: False
[2025-11-22 00:00:06] 2025-11-22 04:38:09,071 | INFO     | sizes: {0: 2297922, 1: 2298778, 5: 2299040, 12: 2299096, 58003: 2350903, 58004: 2350902, 58013: 2360136, 58050: 2360326}
[2025-11-22 00:00:06] 2025-11-22 04:38:09,071 | INFO     | --------------------------------------------------
[2025-11-22 00:00:06] 2025-11-22 04:38:09,071 | INFO     | 
[2025-11-22 00:00:06] 2025-11-22 04:38:09,071 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-22 00:00:06] 2025-11-22 04:38:09,108 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,108 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,110 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 00:00:06] 2025-11-22 04:38:09,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,110 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 00:00:06] 2025-11-22 04:38:09,110 | INFO     | job 6893874871 has completed (purged errors)
[2025-11-22 00:00:06] 2025-11-22 04:38:09,110 | INFO     | overall cleanup function is called
[2025-11-22 00:00:06] 2025-11-22 04:38:10,167 | INFO     | --- collectZombieJob: --- 10, [1372430]
[2025-11-22 00:00:06] 2025-11-22 04:38:10,167 | INFO     | zombie collector waiting for pid 1372430
[2025-11-22 00:00:06] 2025-11-22 04:38:10,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 00:00:06] 2025-11-22 04:38:10,168 | INFO     | collected zombie processes
[2025-11-22 00:00:06] 2025-11-22 04:38:10,168 | INFO     | will attempt to kill all subprocesses of pid=1372430
[2025-11-22 00:00:06] 2025-11-22 04:38:10,688 | INFO     | process IDs to be killed: [1372430] (in reverse order)
[2025-11-22 00:00:06] 2025-11-22 04:38:10,912 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 00:00:06] 2025-11-22 04:38:10,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 00:00:06] 2025-11-22 04:38:10,930 | INFO     | did not find any defunct processes belonging to 1372430
[2025-11-22 00:00:06] 2025-11-22 04:38:10,951 | INFO     | did not find any defunct processes belonging to 1372430
[2025-11-22 00:00:06] 2025-11-22 04:38:10,953 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 00:00:06] 2025-11-22 04:38:10,953 | INFO     | ready for new job
[2025-11-22 00:00:06] 2025-11-22 04:38:10,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 00:00:06] 2025-11-22 04:38:10,961 | INFO     | ***************************************
[2025-11-22 00:00:06] 2025-11-22 04:38:10,961 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 00:00:06] 2025-11-22 04:38:10,962 | INFO     | ***************************************
[2025-11-22 00:00:06] 2025-11-22 04:38:10,962 | INFO     | 
[2025-11-22 00:00:06] 2025-11-22 04:38:10,969 | INFO     | architecture information:
[2025-11-22 00:00:06] 2025-11-22 04:38:10,973 | INFO     | executing command: cat /etc/os-release
[2025-11-22 00:00:06] 2025-11-22 04:38:11,027 | INFO     | cat /etc/os-release:
[2025-11-22 00:00:06] NAME="CentOS Linux"
[2025-11-22 00:00:06] VERSION="7 (Core)"
[2025-11-22 00:00:06] ID="centos"
[2025-11-22 00:00:06] ID_LIKE="rhel fedora"
[2025-11-22 00:00:06] VERSION_ID="7"
[2025-11-22 00:00:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 00:00:06] ANSI_COLOR="0;31"
[2025-11-22 00:00:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 00:00:06] HOME_URL="https://www.centos.org/"
[2025-11-22 00:00:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 00:00:06] 
[2025-11-22 00:00:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 00:00:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 00:00:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 00:00:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 00:00:06] 
[2025-11-22 00:00:06] 2025-11-22 04:38:11,027 | INFO     | ***************************************
[2025-11-22 00:00:06] 2025-11-22 04:38:11,530 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-22 00:00:06] 2025-11-22 04:38:11,624 | INFO     | sufficient remaining disk space (68076699648 B)
[2025-11-22 00:00:06] 2025-11-22 04:38:11,624 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 00:00:06] 2025-11-22 04:38:11,624 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 00:00:06] 2025-11-22 04:38:11,624 | INFO     | update_server=False
[2025-11-22 00:00:06] 2025-11-22 04:38:11,624 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 00:00:06] 2025-11-22 04:38:11,687 | INFO     | all job control threads have been joined
[2025-11-22 00:00:06] 2025-11-22 04:38:12,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:00:06] 2025-11-22 04:38:12,213 | INFO     | aborting loop
[2025-11-22 00:00:06] 2025-11-22 04:38:12,537 | INFO     | all payload control threads have been joined
[2025-11-22 00:00:06] 2025-11-22 04:38:12,629 | INFO     | [job] retrieve thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:12,634 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:12,694 | INFO     | [job] control thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:12,700 | INFO     | all data control threads have been joined
[2025-11-22 00:00:06] 2025-11-22 04:38:12,789 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:12,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 00:00:06] 2025-11-22 04:38:13,218 | INFO     | [job] job monitor thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:13,364 | INFO     | [job] validate thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:13,515 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:13,545 | INFO     | [payload] control thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:13,706 | INFO     | [data] control thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:13,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:14,005 | INFO     | [data] copytool_in thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:14,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:00:06] 2025-11-22 04:38:14,110 | INFO     | [payload] validate_post thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:14,217 | INFO     | [payload] failed_post thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:14,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 00:00:06] 2025-11-22 04:38:14,810 | INFO     | [data] copytool_out thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:15,091 | INFO     | [job] queue monitor thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:18,297 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 00:00:06] 2025-11-22 04:38:41,710 | INFO     | PID=1366068 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 00:00:06] 2025-11-22 04:38:41,711 | INFO     | .. there are 12 such processes running
[2025-11-22 00:00:06] 2025-11-22 04:38:41,712 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 00:00:06] 2025-11-22 04:38:41,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 00:00:06] 2025-11-22 04:38:41,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 00:00:06] 2025-11-22 04:39:10,583 | INFO     | [monitor] cgroup control has ended
[2025-11-22 00:00:06] 2025-11-22 04:39:11,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729749280576)>', '<ExcThread(monitor, started 139729026668288)>']
[2025-11-22 00:00:06] 2025-11-22 04:39:11,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 00:00:06] 2025-11-22 04:39:11,942 | INFO     | [monitor] control thread has ended
[2025-11-22 00:00:06] 2025-11-22 04:39:16,481 | INFO     | all workflow threads have been joined
[2025-11-22 00:00:06] 2025-11-22 04:39:16,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 00:00:06] 2025-11-22 04:39:16,482 | INFO     | traces error code: 0
[2025-11-22 00:00:06] 2025-11-22 04:39:16,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 00:00:06] 2025-11-22 04:39:18,126 [wrapper] ==== pilot stdout END ====
[2025-11-22 00:00:06] 2025-11-22 04:39:18,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 00:00:06] 2025-11-22 04:39:18,167 [wrapper] pilotpid: 1366068
[2025-11-22 00:00:06] 2025-11-22 04:39:18,199 [wrapper] Pilot exit status: 0
[2025-11-22 00:00:06] 2025-11-22 04:39:18,332 [wrapper] pandaids: 6893874871
[2025-11-22 00:00:06] 2025-11-22 04:39:18,455 [wrapper] cleanup supervisor_pilot 2885617 1366069
[2025-11-22 00:00:06] 2025-11-22 04:39:18,468 [wrapper] Test setup, not cleaning
[2025-11-22 00:00:06] 2025-11-22 04:39:18,498 [wrapper] apfmon messages muted
[2025-11-22 00:00:06] 2025-11-22 04:39:18,538 [wrapper] ==== wrapper stdout END ====
[2025-11-22 00:00:06] 2025-11-22 04:39:18,552 [wrapper] ==== wrapper stderr END ====
[2025-11-22 00:00:06]  *** Error codes and diagnostics ***
[2025-11-22 00:00:06]     "exeErrorCode": 0,
[2025-11-22 00:00:06]     "exeErrorDiag": "",
[2025-11-22 00:00:06]     "pilotErrorCode": 0,
[2025-11-22 00:00:06]     "pilotErrorDiag": "",
[2025-11-22 00:00:06]  *** Listing of results directory ***
[2025-11-22 00:00:06] total 1329012
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:08 pilot3.tar.gz
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:44 queuedata.json
[2025-11-22 00:00:06] -rwx------. 1 boincer umatlas     36292 Nov 20 11:45 runpilot2-wrapper.sh
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas       100 Nov 21 07:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 00:00:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 07:30 run_atlas
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas       105 Nov 21 07:30 job.xml
[2025-11-22 00:00:06] -rw-r--r--. 2 boincer umatlas 411266838 Nov 21 07:30 EVNT.47493127._000744.pool.root.1
[2025-11-22 00:00:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 07:30 start_atlas.sh
[2025-11-22 00:00:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 07:30 shared
[2025-11-22 00:00:06] -rw-r--r--. 2 boincer umatlas    590100 Nov 21 07:30 input.tar.gz
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas         0 Nov 21 07:30 boinc_lockfile
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas      2782 Nov 21 07:30 pandaJob.out
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas        57 Nov 21 07:30 setup.sh.local
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas    989817 Nov 21 07:30 agis_schedconf.cvmfs.json
[2025-11-22 00:00:06] drwx------. 5 boincer umatlas      4096 Nov 21 07:30 pilot3
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas       533 Nov 21 23:15 boinc_task_state.xml
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas 926212299 Nov 21 23:36 HITS.47523449._007431.pool.root.1
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas      1071 Nov 21 23:37 memory_monitor_summary.json
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas   1526164 Nov 21 23:37 agis_ddmendpoints.agis.ALL.json
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas   2325185 Nov 21 23:37 log.47523449._007431.job.log.tgz.1
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas        95 Nov 21 23:38 pilot_heartbeat.json
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas      8654 Nov 21 23:38 heartbeat.json
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas      4824 Nov 21 23:39 pilotlog.txt
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas   7428715 Nov 21 23:39 log.47523449._007431.job.log.1
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas       353 Nov 21 23:39 output.list
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas       620 Nov 21 23:39 runtime_log
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas   9768960 Nov 21 23:39 result.tar.gz
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas      9355 Nov 21 23:39 runtime_log.err
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas       667 Nov 21 23:39 FPsLDmnxMg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkJIKDm6l76Em.diag
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas        29 Nov 22 00:00 wrapper_checkpoint.txt
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas      6846 Nov 22 00:00 init_data.xml
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 00:00 boinc_mmap_file
[2025-11-22 00:00:06] -rw-r--r--. 1 boincer umatlas     21194 Nov 22 00:00 stderr.txt
[2025-11-22 00:00:06] HITS file was successfully produced:
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas 926212299 Nov 21 23:36 shared/HITS.pool.root.1
[2025-11-22 00:00:06]  *** Contents of shared directory: ***
[2025-11-22 00:00:06] total 1316280
[2025-11-22 00:00:06] -rw-r--r--. 2 boincer umatlas 411266838 Nov 21 07:30 ATLAS.root_0
[2025-11-22 00:00:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 07:30 start_atlas.sh
[2025-11-22 00:00:06] -rw-r--r--. 2 boincer umatlas    590100 Nov 21 07:30 input.tar.gz
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas 926212299 Nov 21 23:36 HITS.pool.root.1
[2025-11-22 00:00:06] -rw-------. 1 boincer umatlas   9768960 Nov 21 23:39 result.tar.gz
00:00:07 (1362408): run_atlas exited; CPU time 232043.441086
00:00:07 (1362408): called boinc_finish(0)

</stderr_txt>
]]>

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