Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:44:19 (8789): wrapper (7.7.26015): starting
06:44:19 (8789): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 06:44:19] Arguments: --nthreads 8
[2025-11-21 06:44:19] Threads: 8
[2025-11-21 06:44:19] Checking for CVMFS
[2025-11-21 06:44:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 06:44:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 06:44:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 06:44:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 06:44:19] 2.11.2.0 2893 58470 85328 153124 1 82 20111617 20275201 1 130560 0 14816875 99.793 4061377 29833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 06:44:19] CVMFS is ok
[2025-11-21 06:44:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 06:44:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 06:44:19] Further information can be found at the LHC@home message board.
[2025-11-21 06:44:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 06:44:19] Checking for apptainer binary...
[2025-11-21 06:44:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 06:44:19] Running /usr/bin/apptainer --version
[2025-11-21 06:44:19] apptainer version 1.3.2-1.el7
[2025-11-21 06:44:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 06:44:21] c-204-22.aglt2.org
[2025-11-21 06:44:21] apptainer works
[2025-11-21 06:44:21] Set ATHENA_PROC_NUMBER=8
[2025-11-21 06:44:21] Set ATHENA_CORE_NUMBER=8
[2025-11-21 06:44:21] Starting ATLAS job with PandaID=6893887289
[2025-11-21 06:44:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 19:17:14]  *** The last 200 lines of the pilot log: ***
[2025-11-21 19:17:14] 2025-11-22 00:16:38,796 | INFO     | time since job start (45120s) is within the limit (172800.0s)
[2025-11-21 19:17:14] 2025-11-22 00:16:39,393 | INFO     | monitor loop #3323: job 0:6893887289 is in state 'finished'
[2025-11-21 19:17:14] 2025-11-22 00:16:39,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:17:14] 2025-11-22 00:16:40,801 | INFO     | time since job start (45122s) is within the limit (172800.0s)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,452 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 19:17:14] 2025-11-22 00:16:41,456 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.375
[2025-11-21 19:17:14] 2025-11-22 00:16:41,458 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893887289/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,459 | INFO     | extracted standard info from prmon json
[2025-11-21 19:17:14] 2025-11-22 00:16:41,460 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 19:17:14] 2025-11-22 00:16:41,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 19:17:14] 2025-11-22 00:16:41,474 | INFO     | fitting pss+swap vs Time
[2025-11-21 19:17:14] 2025-11-22 00:16:41,475 | INFO     | sum of square deviations: 125144699390.72186
[2025-11-21 19:17:14] 2025-11-22 00:16:41,486 | INFO     | sum of deviations: 821591963055.2776
[2025-11-21 19:17:14] 2025-11-22 00:16:41,486 | INFO     | mean x: 1763748020.5060892
[2025-11-21 19:17:14] 2025-11-22 00:16:41,487 | INFO     | mean y: 2873699.4939106903
[2025-11-21 19:17:14] 2025-11-22 00:16:41,487 | INFO     | intersect: -11576371810.36339
[2025-11-21 19:17:14] 2025-11-22 00:16:41,488 | INFO     | chi2: 5.181260742766358
[2025-11-21 19:17:14] 2025-11-22 00:16:41,488 | INFO     | sum of square deviations: 122621817316.93367
[2025-11-21 19:17:14] 2025-11-22 00:16:41,499 | INFO     | sum of deviations: 1047504600465.945
[2025-11-21 19:17:14] 2025-11-22 00:16:41,499 | INFO     | mean x: 1763747868.0095367
[2025-11-21 19:17:14] 2025-11-22 00:16:41,500 | INFO     | mean y: 2887348.865122616
[2025-11-21 19:17:14] 2025-11-22 00:16:41,500 | INFO     | intersect: -15064039942.114227
[2025-11-21 19:17:14] 2025-11-22 00:16:41,501 | INFO     | chi2: 2.40777624660547
[2025-11-21 19:17:14] 2025-11-22 00:16:41,501 | INFO     | current chi2=2.40777624660547 (change=53.52914346248632 %)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,501 | INFO     | sum of square deviations: 120133030888.15088
[2025-11-21 19:17:14] 2025-11-22 00:16:41,513 | INFO     | sum of deviations: 1084866162941.8348
[2025-11-21 19:17:14] 2025-11-22 00:16:41,513 | INFO     | mean x: 1763747715.5116599
[2025-11-21 19:17:14] 2025-11-22 00:16:41,513 | INFO     | mean y: 2889630.0781893004
[2025-11-21 19:17:14] 2025-11-22 00:16:41,513 | INFO     | intersect: -15924704990.472496
[2025-11-21 19:17:14] 2025-11-22 00:16:41,514 | INFO     | chi2: 2.2130707209967224
[2025-11-21 19:17:14] 2025-11-22 00:16:41,514 | INFO     | current chi2=2.2130707209967224 (change=8.08652904867083 %)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,514 | INFO     | right removable region: 728
[2025-11-21 19:17:14] 2025-11-22 00:16:41,515 | INFO     | sum of square deviations: 122621589176.93367
[2025-11-21 19:17:14] 2025-11-22 00:16:41,527 | INFO     | sum of deviations: 627880338347.9095
[2025-11-21 19:17:14] 2025-11-22 00:16:41,527 | INFO     | mean x: 1763748173.0095367
[2025-11-21 19:17:14] 2025-11-22 00:16:41,527 | INFO     | mean y: 2885388.584468665
[2025-11-21 19:17:14] 2025-11-22 00:16:41,527 | INFO     | intersect: -9028336658.552826
[2025-11-21 19:17:14] 2025-11-22 00:16:41,528 | INFO     | chi2: 3.130966043314889
[2025-11-21 19:17:14] 2025-11-22 00:16:41,528 | INFO     | current chi2=3.130966043314889 (change=39.571347616772975 %)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,529 | INFO     | sum of square deviations: 120132708686.17287
[2025-11-21 19:17:14] 2025-11-22 00:16:41,541 | INFO     | sum of deviations: 582720438429.5023
[2025-11-21 19:17:14] 2025-11-22 00:16:41,541 | INFO     | mean x: 1763748325.510288
[2025-11-21 19:17:14] 2025-11-22 00:16:41,541 | INFO     | mean y: 2888154.4663923183
[2025-11-21 19:17:14] 2025-11-22 00:16:41,541 | INFO     | intersect: -8552418795.329796
[2025-11-21 19:17:14] 2025-11-22 00:16:41,542 | INFO     | chi2: 3.082241734021697
[2025-11-21 19:17:14] 2025-11-22 00:16:41,542 | INFO     | current chi2=3.082241734021697 (change=1.5562068901138706 %)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,542 | INFO     | left removable region: 20
[2025-11-21 19:17:14] 2025-11-22 00:16:41,543 | INFO     | sum of square deviations: 110047186389.72336
[2025-11-21 19:17:14] 2025-11-22 00:16:41,553 | INFO     | sum of deviations: 791405204134.1552
[2025-11-21 19:17:14] 2025-11-22 00:16:41,553 | INFO     | mean x: 1763748295.019774
[2025-11-21 19:17:14] 2025-11-22 00:16:41,554 | INFO     | mean y: 2907662.846045198
[2025-11-21 19:17:14] 2025-11-22 00:16:41,554 | INFO     | intersect: -12681102035.667624
[2025-11-21 19:17:14] 2025-11-22 00:16:41,554 | INFO     | chi2: 0.08718893107018273
[2025-11-21 19:17:14] 2025-11-22 00:16:41,555 | INFO     | current memory leak: 7.19 B/s (using 708 data points, chi2=0.09)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,555 | INFO     | could have reported an average CPU frequency of 2164 MHz (28 samples)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,555 | INFO     | ..............................
[2025-11-21 19:17:14] 2025-11-22 00:16:41,555 | INFO     | . Timing measurements:
[2025-11-21 19:17:14] 2025-11-22 00:16:41,556 | INFO     | . get job = 0 s
[2025-11-21 19:17:14] 2025-11-22 00:16:41,556 | INFO     | . initial setup = 2 s
[2025-11-21 19:17:14] 2025-11-22 00:16:41,556 | INFO     | . payload setup = 9 s
[2025-11-21 19:17:14] 2025-11-22 00:16:41,556 | INFO     | . stage-in = 0 s
[2025-11-21 19:17:14] 2025-11-22 00:16:41,556 | INFO     | . payload execution = 45079 s
[2025-11-21 19:17:14] 2025-11-22 00:16:41,556 | INFO     | . stage-out = 3 s
[2025-11-21 19:17:14] 2025-11-22 00:16:41,556 | INFO     | . log creation = 0 s
[2025-11-21 19:17:14] 2025-11-22 00:16:41,556 | INFO     | ..............................
[2025-11-21 19:17:14] 2025-11-22 00:16:41,812 | INFO     | 
[2025-11-21 19:17:14] 2025-11-22 00:16:41,812 | INFO     | job summary report
[2025-11-21 19:17:14] 2025-11-22 00:16:41,812 | INFO     | --------------------------------------------------
[2025-11-21 19:17:14] 2025-11-22 00:16:41,812 | INFO     | PanDA job id: 6893887289
[2025-11-21 19:17:14] 2025-11-22 00:16:41,813 | INFO     | task id: 47523449
[2025-11-21 19:17:14] 2025-11-22 00:16:41,813 | INFO     | errors: (none)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,813 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 19:17:14] 2025-11-22 00:16:41,813 | INFO     | pilot state: finished 
[2025-11-21 19:17:14] 2025-11-22 00:16:41,813 | INFO     | transexitcode: 0
[2025-11-21 19:17:14] 2025-11-22 00:16:41,813 | INFO     | exeerrorcode: 0
[2025-11-21 19:17:14] 2025-11-22 00:16:41,814 | INFO     | exeerrordiag: 
[2025-11-21 19:17:14] 2025-11-22 00:16:41,814 | INFO     | exitcode: 0
[2025-11-21 19:17:14] 2025-11-22 00:16:41,814 | INFO     | exitmsg: OK
[2025-11-21 19:17:14] 2025-11-22 00:16:41,814 | INFO     | cpuconsumptiontime: 349475 s
[2025-11-21 19:17:14] 2025-11-22 00:16:41,814 | INFO     | nevents: 1000
[2025-11-21 19:17:14] 2025-11-22 00:16:41,814 | INFO     | neventsw: 0
[2025-11-21 19:17:14] 2025-11-22 00:16:41,814 | INFO     | pid: 19109
[2025-11-21 19:17:14] 2025-11-22 00:16:41,814 | INFO     | pgrp: 19109
[2025-11-21 19:17:14] 2025-11-22 00:16:41,815 | INFO     | corecount: 8
[2025-11-21 19:17:14] 2025-11-22 00:16:41,815 | INFO     | event service: False
[2025-11-21 19:17:14] 2025-11-22 00:16:41,815 | INFO     | sizes: {0: 2298635, 1: 2298834, 7: 2299096, 11: 2299124, 45092: 2345106, 45097: 2354100, 45098: 2354284, 45106: 2354558}
[2025-11-21 19:17:14] 2025-11-22 00:16:41,815 | INFO     | --------------------------------------------------
[2025-11-21 19:17:14] 2025-11-22 00:16:41,815 | INFO     | 
[2025-11-21 19:17:14] 2025-11-22 00:16:41,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 19:17:14] 2025-11-22 00:16:41,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,844 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,844 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,847 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,847 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,847 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,847 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,848 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 19:17:14] 2025-11-22 00:16:41,848 | INFO     | job 6893887289 has completed (purged errors)
[2025-11-21 19:17:14] 2025-11-22 00:16:41,848 | INFO     | overall cleanup function is called
[2025-11-21 19:17:14] 2025-11-22 00:16:42,864 | INFO     | --- collectZombieJob: --- 10, [19109]
[2025-11-21 19:17:14] 2025-11-22 00:16:42,864 | INFO     | zombie collector waiting for pid 19109
[2025-11-21 19:17:14] 2025-11-22 00:16:42,864 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 19:17:14] 2025-11-22 00:16:42,864 | INFO     | collected zombie processes
[2025-11-21 19:17:14] 2025-11-22 00:16:42,865 | INFO     | will attempt to kill all subprocesses of pid=19109
[2025-11-21 19:17:14] 2025-11-22 00:16:42,953 | INFO     | process IDs to be killed: [19109] (in reverse order)
[2025-11-21 19:17:14] 2025-11-22 00:16:43,016 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 19:17:14] 2025-11-22 00:16:43,017 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 19:17:14] 2025-11-22 00:16:43,020 | INFO     | did not find any defunct processes belonging to 19109
[2025-11-21 19:17:14] 2025-11-22 00:16:43,024 | INFO     | did not find any defunct processes belonging to 19109
[2025-11-21 19:17:14] 2025-11-22 00:16:43,027 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 19:17:14] 2025-11-22 00:16:43,027 | INFO     | ready for new job
[2025-11-21 19:17:14] 2025-11-22 00:16:43,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 19:17:14] 2025-11-22 00:16:43,031 | INFO     | ***************************************
[2025-11-21 19:17:14] 2025-11-22 00:16:43,031 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 19:17:14] 2025-11-22 00:16:43,031 | INFO     | ***************************************
[2025-11-21 19:17:14] 2025-11-22 00:16:43,031 | INFO     | 
[2025-11-21 19:17:14] 2025-11-22 00:16:43,032 | INFO     | architecture information:
[2025-11-21 19:17:14] 2025-11-22 00:16:43,032 | INFO     | executing command: cat /etc/os-release
[2025-11-21 19:17:14] 2025-11-22 00:16:43,050 | INFO     | cat /etc/os-release:
[2025-11-21 19:17:14] NAME="CentOS Linux"
[2025-11-21 19:17:14] VERSION="7 (Core)"
[2025-11-21 19:17:14] ID="centos"
[2025-11-21 19:17:14] ID_LIKE="rhel fedora"
[2025-11-21 19:17:14] VERSION_ID="7"
[2025-11-21 19:17:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 19:17:14] ANSI_COLOR="0;31"
[2025-11-21 19:17:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 19:17:14] HOME_URL="https://www.centos.org/"
[2025-11-21 19:17:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 19:17:14] 
[2025-11-21 19:17:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 19:17:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 19:17:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 19:17:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 19:17:14] 
[2025-11-21 19:17:14] 2025-11-22 00:16:43,051 | INFO     | ***************************************
[2025-11-21 19:17:14] 2025-11-22 00:16:43,554 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 19:17:14] 2025-11-22 00:16:43,574 | INFO     | sufficient remaining disk space (17435721728 B)
[2025-11-21 19:17:14] 2025-11-22 00:16:43,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 19:17:14] 2025-11-22 00:16:43,575 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 19:17:14] 2025-11-22 00:16:43,575 | INFO     | update_server=False
[2025-11-21 19:17:14] 2025-11-22 00:16:43,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 19:17:14] 2025-11-22 00:16:43,576 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:17:14] 2025-11-22 00:16:43,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:17:14] 2025-11-22 00:16:43,577 | INFO     | aborting loop
[2025-11-21 19:17:14] 2025-11-22 00:16:43,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 19:17:14] 2025-11-22 00:16:44,224 | INFO     | all data control threads have been joined
[2025-11-21 19:17:14] 2025-11-22 00:16:44,581 | INFO     | [job] retrieve thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:44,581 | INFO     | [job] queue monitor thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:44,582 | INFO     | [job] job monitor thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:44,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 19:17:14] 2025-11-22 00:16:44,643 | INFO     | all job control threads have been joined
[2025-11-21 19:17:14] 2025-11-22 00:16:44,735 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:44,756 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:44,816 | INFO     | all payload control threads have been joined
[2025-11-21 19:17:14] 2025-11-22 00:16:45,141 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:45,229 | INFO     | [data] control thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:45,290 | INFO     | [job] validate thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:45,291 | INFO     | [data] copytool_in thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:45,366 | INFO     | [payload] validate_post thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:45,583 | INFO     | [data] copytool_out thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:45,594 | INFO     | [payload] failed_post thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:45,648 | INFO     | [job] control thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:45,768 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:45,822 | INFO     | [payload] control thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:48,646 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 19:17:14] 2025-11-22 00:16:53,209 | INFO     | [monitor] cgroup control has ended
[2025-11-21 19:17:14] 2025-11-22 00:16:53,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919881062208)>', '<ExcThread(monitor, started 139918693103360)>']
[2025-11-21 19:17:14] 2025-11-22 00:16:58,310 | INFO     | all workflow threads have been joined
[2025-11-21 19:17:14] 2025-11-22 00:16:58,310 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 19:17:14] 2025-11-22 00:16:58,311 | INFO     | traces error code: 0
[2025-11-21 19:17:14] 2025-11-22 00:16:58,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 19:17:14] 2025-11-22 00:17:14,022 | INFO     | PID=12482 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 19:17:14] 2025-11-22 00:17:14,023 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 19:17:14] 2025-11-22 00:17:14,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 19:17:14] 2025-11-22 00:17:14,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 19:17:14] 2025-11-22 00:17:14,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 19:17:14] 2025-11-22 00:17:14,024 | INFO     | [monitor] control thread has ended
[2025-11-21 19:17:14] 2025-11-22 00:17:14,148 [wrapper] ==== pilot stdout END ====
[2025-11-21 19:17:14] 2025-11-22 00:17:14,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 19:17:14] 2025-11-22 00:17:14,158 [wrapper] pilotpid: 12482
[2025-11-21 19:17:14] 2025-11-22 00:17:14,163 [wrapper] Pilot exit status: 0
[2025-11-21 19:17:14] 2025-11-22 00:17:14,180 [wrapper] pandaids: 6893887289
[2025-11-21 19:17:14] 2025-11-22 00:17:14,221 [wrapper] cleanup supervisor_pilot 17309 12483
[2025-11-21 19:17:14] 2025-11-22 00:17:14,226 [wrapper] Test setup, not cleaning
[2025-11-21 19:17:14] 2025-11-22 00:17:14,230 [wrapper] apfmon messages muted
[2025-11-21 19:17:14] 2025-11-22 00:17:14,234 [wrapper] ==== wrapper stdout END ====
[2025-11-21 19:17:14] 2025-11-22 00:17:14,239 [wrapper] ==== wrapper stderr END ====
[2025-11-21 19:17:14]  *** Error codes and diagnostics ***
[2025-11-21 19:17:14]     "exeErrorCode": 0,
[2025-11-21 19:17:14]     "exeErrorDiag": "",
[2025-11-21 19:17:14]     "pilotErrorCode": 0,
[2025-11-21 19:17:14]     "pilotErrorDiag": "",
[2025-11-21 19:17:14]  *** Listing of results directory ***
[2025-11-21 19:17:14] total 1317444
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 18:11 pilot3.tar.gz
[2025-11-21 19:17:14] -rwx------ 1 boincer umatlas     36292 Nov 20 18:28 runpilot2-wrapper.sh
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 18:28 queuedata.json
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas       100 Nov 21 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 19:17:14] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 06:44 run_atlas
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas       105 Nov 21 06:44 job.xml
[2025-11-21 19:17:14] -rw-r--r-- 2 boincer umatlas 409669958 Nov 21 06:44 EVNT.47493127._000978.pool.root.1
[2025-11-21 19:17:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 06:44 start_atlas.sh
[2025-11-21 19:17:14] drwxrwx--x 2 boincer umatlas      4096 Nov 21 06:44 shared
[2025-11-21 19:17:14] -rw-r--r-- 2 boincer umatlas    590100 Nov 21 06:44 input.tar.gz
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas         0 Nov 21 06:44 boinc_lockfile
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas      2785 Nov 21 06:44 pandaJob.out
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas        57 Nov 21 06:44 setup.sh.local
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas    989817 Nov 21 06:44 agis_schedconf.cvmfs.json
[2025-11-21 19:17:14] drwx------ 5 boincer umatlas      4096 Nov 21 06:44 pilot3
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas       532 Nov 21 19:07 boinc_task_state.xml
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas      5912 Nov 21 19:12 init_data.xml
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas 919044169 Nov 21 19:15 HITS.47523449._009778.pool.root.1
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas      1064 Nov 21 19:16 memory_monitor_summary.json
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas   1526164 Nov 21 19:16 agis_ddmendpoints.agis.ALL.json
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas   1997865 Nov 21 19:16 log.47523449._009778.job.log.tgz.1
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas      8674 Nov 21 19:16 heartbeat.json
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 19:16 boinc_mmap_file
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas        29 Nov 21 19:16 wrapper_checkpoint.txt
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas        95 Nov 21 19:17 pilot_heartbeat.json
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas       745 Nov 21 19:17 pilotlog.txt
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas   6216581 Nov 21 19:17 log.47523449._009778.job.log.1
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas       353 Nov 21 19:17 output.list
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas       620 Nov 21 19:17 runtime_log
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas   8232960 Nov 21 19:17 result.tar.gz
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas       668 Nov 21 19:17 YuuKDmqFTg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxfIKDmnJ72Km.diag
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 19:17 runtime_log.err
[2025-11-21 19:17:14] -rw-r--r-- 1 boincer umatlas     21310 Nov 21 19:17 stderr.txt
[2025-11-21 19:17:14] HITS file was successfully produced:
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas 919044169 Nov 21 19:15 shared/HITS.pool.root.1
[2025-11-21 19:17:14]  *** Contents of shared directory: ***
[2025-11-21 19:17:14] total 1306220
[2025-11-21 19:17:14] -rw-r--r-- 2 boincer umatlas 409669958 Nov 21 06:44 ATLAS.root_0
[2025-11-21 19:17:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 06:44 start_atlas.sh
[2025-11-21 19:17:14] -rw-r--r-- 2 boincer umatlas    590100 Nov 21 06:44 input.tar.gz
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas 919044169 Nov 21 19:15 HITS.pool.root.1
[2025-11-21 19:17:14] -rw------- 1 boincer umatlas   8232960 Nov 21 19:17 result.tar.gz
19:17:15 (8789): run_atlas exited; CPU time 345298.759010
19:17:15 (8789): called boinc_finish(0)

</stderr_txt>
]]>

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