Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:39:44 (7038): wrapper (7.7.26015): starting
08:39:44 (7038): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 08:39:44] Arguments: --nthreads 8
[2025-11-21 08:39:44] Threads: 8
[2025-11-21 08:39:44] Checking for CVMFS
[2025-11-21 08:39:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 08:39:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 08:39:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 08:39:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 08:39:45] 2.13.3.0 7489 22921 353388 153129 1 246 22502065 32935936 14472 16776704 0 163275084 99.683 132668358 40119 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 08:39:45] CVMFS is ok
[2025-11-21 08:39:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 08:39:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 08:39:45] Further information can be found at the LHC@home message board.
[2025-11-21 08:39:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 08:39:45] Checking for apptainer binary...
[2025-11-21 08:39:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 08:39:45] Running /usr/bin/apptainer --version
[2025-11-21 08:39:45] apptainer version 1.4.4-1.el9
[2025-11-21 08:39:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 08:39:46] c7-13-32.aglt2.org
[2025-11-21 08:39:46] apptainer works
[2025-11-21 08:39:46] Set ATHENA_PROC_NUMBER=8
[2025-11-21 08:39:46] Set ATHENA_CORE_NUMBER=8
[2025-11-21 08:39:46] Starting ATLAS job with PandaID=6893860388
[2025-11-21 08:39:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 18:52:27]  *** The last 200 lines of the pilot log: ***
[2025-11-21 18:52:27] 2025-11-21 23:51:23,509 | INFO     | monitor loop #2464: job 0:6893860388 is in state 'finished'
[2025-11-21 18:52:27] 2025-11-21 23:51:23,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,274 | INFO     | time since job start (36666s) is within the limit (172800.0s)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,507 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 18:52:27] 2025-11-21 23:51:24,517 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.129421875
[2025-11-21 18:52:27] 2025-11-21 23:51:24,550 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6893860388/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,551 | INFO     | extracted standard info from prmon json
[2025-11-21 18:52:27] 2025-11-21 23:51:24,551 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 18:52:27] 2025-11-21 23:51:24,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 18:52:27] 2025-11-21 23:51:24,580 | INFO     | fitting pss+swap vs Time
[2025-11-21 18:52:27] 2025-11-21 23:51:24,581 | INFO     | sum of square deviations: 66977371135.51845
[2025-11-21 18:52:27] 2025-11-21 23:51:24,596 | INFO     | sum of deviations: 579450399650.2025
[2025-11-21 18:52:27] 2025-11-21 23:51:24,597 | INFO     | mean x: 1763750772.5283334
[2025-11-21 18:52:27] 2025-11-21 23:51:24,597 | INFO     | mean y: 2894887.223333333
[2025-11-21 18:52:27] 2025-11-21 23:51:24,597 | INFO     | intersect: -15256080983.254227
[2025-11-21 18:52:27] 2025-11-21 23:51:24,597 | INFO     | chi2: 6.395449239488307
[2025-11-21 18:52:27] 2025-11-21 23:51:24,598 | INFO     | sum of square deviations: 65317025855.186295
[2025-11-21 18:52:27] 2025-11-21 23:51:24,617 | INFO     | sum of deviations: 773336617205.521
[2025-11-21 18:52:27] 2025-11-21 23:51:24,617 | INFO     | mean x: 1763750620.036975
[2025-11-21 18:52:27] 2025-11-21 23:51:24,617 | INFO     | mean y: 2912679.067226891
[2025-11-21 18:52:27] 2025-11-21 23:51:24,617 | INFO     | intersect: -20879436451.733444
[2025-11-21 18:52:27] 2025-11-21 23:51:24,618 | INFO     | chi2: 3.4280105188061225
[2025-11-21 18:52:27] 2025-11-21 23:51:24,618 | INFO     | current chi2=3.4280105188061225 (change=46.39922247150234 %)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,619 | INFO     | sum of square deviations: 63684246996.523575
[2025-11-21 18:52:27] 2025-11-21 23:51:24,634 | INFO     | sum of deviations: 777107937997.8486
[2025-11-21 18:52:27] 2025-11-21 23:51:24,634 | INFO     | mean x: 1763750467.540678
[2025-11-21 18:52:27] 2025-11-21 23:51:24,634 | INFO     | mean y: 2913019.527118644
[2025-11-21 18:52:27] 2025-11-21 23:51:24,634 | INFO     | intersect: -21519277374.717445
[2025-11-21 18:52:27] 2025-11-21 23:51:24,639 | INFO     | chi2: 3.3310570176617023
[2025-11-21 18:52:27] 2025-11-21 23:51:24,639 | INFO     | current chi2=3.3310570176617023 (change=2.8282731518042823 %)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,639 | INFO     | right removable region: 589
[2025-11-21 18:52:27] 2025-11-21 23:51:24,640 | INFO     | sum of square deviations: 65316649485.18631
[2025-11-21 18:52:27] 2025-11-21 23:51:24,655 | INFO     | sum of deviations: 371147097204.19635
[2025-11-21 18:52:27] 2025-11-21 23:51:24,656 | INFO     | mean x: 1763750925.036975
[2025-11-21 18:52:27] 2025-11-21 23:51:24,656 | INFO     | mean y: 2913997.3092436977
[2025-11-21 18:52:27] 2025-11-21 23:51:24,656 | INFO     | intersect: -10019201974.318386
[2025-11-21 18:52:27] 2025-11-21 23:51:24,656 | INFO     | chi2: 3.2151015505621805
[2025-11-21 18:52:27] 2025-11-21 23:51:24,657 | INFO     | current chi2=3.2151015505621805 (change=49.72829225645739 %)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,657 | INFO     | sum of square deviations: 63683784252.67969
[2025-11-21 18:52:27] 2025-11-21 23:51:24,673 | INFO     | sum of deviations: 336318674595.4691
[2025-11-21 18:52:27] 2025-11-21 23:51:24,673 | INFO     | mean x: 1763751077.5372882
[2025-11-21 18:52:27] 2025-11-21 23:51:24,673 | INFO     | mean y: 2917247.455932203
[2025-11-21 18:52:27] 2025-11-21 23:51:24,673 | INFO     | intersect: -9311579867.85504
[2025-11-21 18:52:27] 2025-11-21 23:51:24,674 | INFO     | chi2: 3.1709776275466766
[2025-11-21 18:52:27] 2025-11-21 23:51:24,674 | INFO     | current chi2=3.1709776275466766 (change=1.3723959359165063 %)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,674 | INFO     | left removable region: 20
[2025-11-21 18:52:27] 2025-11-21 23:51:24,675 | INFO     | sum of square deviations: 57122991007.52196
[2025-11-21 18:52:27] 2025-11-21 23:51:24,690 | INFO     | sum of deviations: 499104753718.85785
[2025-11-21 18:52:27] 2025-11-21 23:51:24,690 | INFO     | mean x: 1763751047.0509665
[2025-11-21 18:52:27] 2025-11-21 23:51:24,690 | INFO     | mean y: 2939060.3497363795
[2025-11-21 18:52:27] 2025-11-21 23:51:24,690 | INFO     | intersect: -15407607839.126041
[2025-11-21 18:52:27] 2025-11-21 23:51:24,691 | INFO     | chi2: 0.051977786976944856
[2025-11-21 18:52:27] 2025-11-21 23:51:24,695 | INFO     | current memory leak: 8.74 B/s (using 569 data points, chi2=0.05)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,696 | INFO     | could have reported an average CPU frequency of 3290 MHz (24 samples)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,696 | INFO     | ..............................
[2025-11-21 18:52:27] 2025-11-21 23:51:24,696 | INFO     | . Timing measurements:
[2025-11-21 18:52:27] 2025-11-21 23:51:24,696 | INFO     | . get job = 0 s
[2025-11-21 18:52:27] 2025-11-21 23:51:24,696 | INFO     | . initial setup = 3 s
[2025-11-21 18:52:27] 2025-11-21 23:51:24,696 | INFO     | . payload setup = 21 s
[2025-11-21 18:52:27] 2025-11-21 23:51:24,696 | INFO     | . stage-in = 0 s
[2025-11-21 18:52:27] 2025-11-21 23:51:24,696 | INFO     | . payload execution = 36583 s
[2025-11-21 18:52:27] 2025-11-21 23:51:24,696 | INFO     | . stage-out = 4 s
[2025-11-21 18:52:27] 2025-11-21 23:51:24,697 | INFO     | . log creation = 1 s
[2025-11-21 18:52:27] 2025-11-21 23:51:24,697 | INFO     | ..............................
[2025-11-21 18:52:27] 2025-11-21 23:51:24,871 | INFO     | 
[2025-11-21 18:52:27] 2025-11-21 23:51:24,871 | INFO     | job summary report
[2025-11-21 18:52:27] 2025-11-21 23:51:24,871 | INFO     | --------------------------------------------------
[2025-11-21 18:52:27] 2025-11-21 23:51:24,871 | INFO     | PanDA job id: 6893860388
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | task id: 47523449
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | errors: (none)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | pilot state: finished 
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | transexitcode: 0
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | exeerrorcode: 0
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | exeerrordiag: 
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | exitcode: 0
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | exitmsg: OK
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | cpuconsumptiontime: 194675 s
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | nevents: 1000
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | neventsw: 0
[2025-11-21 18:52:27] 2025-11-21 23:51:24,872 | INFO     | pid: 19869
[2025-11-21 18:52:27] 2025-11-21 23:51:24,873 | INFO     | pgrp: 19869
[2025-11-21 18:52:27] 2025-11-21 23:51:24,873 | INFO     | corecount: 8
[2025-11-21 18:52:27] 2025-11-21 23:51:24,873 | INFO     | event service: False
[2025-11-21 18:52:27] 2025-11-21 23:51:24,873 | INFO     | sizes: {0: 2298636, 1: 2298835, 11: 2298835, 21: 2299125, 22: 2299153, 36609: 2342122, 36614: 2351172, 36626: 2351362}
[2025-11-21 18:52:27] 2025-11-21 23:51:24,873 | INFO     | --------------------------------------------------
[2025-11-21 18:52:27] 2025-11-21 23:51:24,873 | INFO     | 
[2025-11-21 18:52:27] 2025-11-21 23:51:24,873 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-21 18:52:27] 2025-11-21 23:51:24,959 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,961 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 18:52:27] 2025-11-21 23:51:24,961 | INFO     | job 6893860388 has completed (purged errors)
[2025-11-21 18:52:27] 2025-11-21 23:51:24,961 | INFO     | overall cleanup function is called
[2025-11-21 18:52:27] 2025-11-21 23:51:26,001 | INFO     | --- collectZombieJob: --- 10, [19869]
[2025-11-21 18:52:27] 2025-11-21 23:51:26,001 | INFO     | zombie collector waiting for pid 19869
[2025-11-21 18:52:27] 2025-11-21 23:51:26,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 18:52:27] 2025-11-21 23:51:26,001 | INFO     | collected zombie processes
[2025-11-21 18:52:27] 2025-11-21 23:51:26,001 | INFO     | will attempt to kill all subprocesses of pid=19869
[2025-11-21 18:52:27] 2025-11-21 23:51:26,962 | INFO     | process IDs to be killed: [19869] (in reverse order)
[2025-11-21 18:52:27] 2025-11-21 23:51:27,146 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 18:52:27] 2025-11-21 23:51:27,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 18:52:27] 2025-11-21 23:51:27,182 | INFO     | did not find any defunct processes belonging to 19869
[2025-11-21 18:52:27] 2025-11-21 23:51:27,222 | INFO     | did not find any defunct processes belonging to 19869
[2025-11-21 18:52:27] 2025-11-21 23:51:27,223 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 18:52:27] 2025-11-21 23:51:27,224 | INFO     | ready for new job
[2025-11-21 18:52:27] 2025-11-21 23:51:27,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 18:52:27] 2025-11-21 23:51:27,232 | INFO     | ***************************************
[2025-11-21 18:52:27] 2025-11-21 23:51:27,232 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 18:52:27] 2025-11-21 23:51:27,232 | INFO     | ***************************************
[2025-11-21 18:52:27] 2025-11-21 23:51:27,232 | INFO     | 
[2025-11-21 18:52:27] 2025-11-21 23:51:27,237 | INFO     | architecture information:
[2025-11-21 18:52:27] 2025-11-21 23:51:27,241 | INFO     | executing command: cat /etc/os-release
[2025-11-21 18:52:27] 2025-11-21 23:51:27,273 | INFO     | cat /etc/os-release:
[2025-11-21 18:52:27] NAME="CentOS Linux"
[2025-11-21 18:52:27] VERSION="7 (Core)"
[2025-11-21 18:52:27] ID="centos"
[2025-11-21 18:52:27] ID_LIKE="rhel fedora"
[2025-11-21 18:52:27] VERSION_ID="7"
[2025-11-21 18:52:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 18:52:27] ANSI_COLOR="0;31"
[2025-11-21 18:52:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 18:52:27] HOME_URL="https://www.centos.org/"
[2025-11-21 18:52:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 18:52:27] 
[2025-11-21 18:52:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 18:52:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 18:52:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 18:52:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 18:52:27] 
[2025-11-21 18:52:27] 2025-11-21 23:51:27,273 | INFO     | ***************************************
[2025-11-21 18:52:27] 2025-11-21 23:51:27,776 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-21 18:52:27] 2025-11-21 23:51:27,816 | INFO     | sufficient remaining disk space (91016396800 B)
[2025-11-21 18:52:27] 2025-11-21 23:51:27,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 18:52:27] 2025-11-21 23:51:27,817 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 18:52:27] 2025-11-21 23:51:27,817 | INFO     | update_server=False
[2025-11-21 18:52:27] 2025-11-21 23:51:27,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 18:52:27] 2025-11-21 23:51:27,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:52:27] 2025-11-21 23:51:27,817 | INFO     | aborting loop
[2025-11-21 18:52:27] 2025-11-21 23:51:27,855 | INFO     | all payload control threads have been joined
[2025-11-21 18:52:27] 2025-11-21 23:51:28,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 18:52:27] 2025-11-21 23:51:28,556 | INFO     | all data control threads have been joined
[2025-11-21 18:52:27] 2025-11-21 23:51:28,826 | INFO     | [job] retrieve thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:28,830 | INFO     | [job] job monitor thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:28,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 18:52:27] 2025-11-21 23:51:28,861 | INFO     | [payload] control thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:28,881 | INFO     | all job control threads have been joined
[2025-11-21 18:52:27] 2025-11-21 23:51:29,132 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:29,528 | INFO     | [payload] failed_post thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:29,562 | INFO     | [data] control thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:29,611 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:29,761 | INFO     | [data] copytool_in thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:29,887 | INFO     | [job] control thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:29,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:52:27] 2025-11-21 23:51:30,018 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:30,047 | INFO     | [job] validate thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:30,048 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:30,172 | INFO     | [payload] validate_post thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:30,869 | INFO     | [data] copytool_out thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:30,897 | INFO     | [job] queue monitor thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:32,430 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 18:52:27] 2025-11-21 23:51:58,307 | INFO     | PID=12317 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 18:52:27] 2025-11-21 23:51:58,307 | INFO     | .. there are 32 such processes running
[2025-11-21 18:52:27] 2025-11-21 23:51:58,307 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 18:52:27] 2025-11-21 23:51:58,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 18:52:27] 2025-11-21 23:51:58,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 18:52:27] 2025-11-21 23:52:20,325 | INFO     | [monitor] cgroup control has ended
[2025-11-21 18:52:27] 2025-11-21 23:52:21,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140011437565760)>', '<ExcThread(monitor, started 140010942613248)>']
[2025-11-21 18:52:27] 2025-11-21 23:52:22,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 18:52:27] 2025-11-21 23:52:22,451 | INFO     | [monitor] control thread has ended
[2025-11-21 18:52:27] 2025-11-21 23:52:26,786 | INFO     | all workflow threads have been joined
[2025-11-21 18:52:27] 2025-11-21 23:52:26,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 18:52:27] 2025-11-21 23:52:26,787 | INFO     | traces error code: 0
[2025-11-21 18:52:27] 2025-11-21 23:52:26,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 18:52:27] 2025-11-21 23:52:27,072 [wrapper] ==== pilot stdout END ====
[2025-11-21 18:52:27] 2025-11-21 23:52:27,084 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 18:52:27] 2025-11-21 23:52:27,088 [wrapper] pilotpid: 12317
[2025-11-21 18:52:27] 2025-11-21 23:52:27,097 [wrapper] Pilot exit status: 0
[2025-11-21 18:52:27] 2025-11-21 23:52:27,138 [wrapper] pandaids: 6893860388
[2025-11-21 18:52:27] 2025-11-21 23:52:27,251 [wrapper] cleanup supervisor_pilot 2288026 12318
[2025-11-21 18:52:27] 2025-11-21 23:52:27,255 [wrapper] Test setup, not cleaning
[2025-11-21 18:52:27] 2025-11-21 23:52:27,260 [wrapper] apfmon messages muted
[2025-11-21 18:52:27] 2025-11-21 23:52:27,263 [wrapper] ==== wrapper stdout END ====
[2025-11-21 18:52:27] 2025-11-21 23:52:27,266 [wrapper] ==== wrapper stderr END ====
[2025-11-21 18:52:27]  *** Error codes and diagnostics ***
[2025-11-21 18:52:27]     "exeErrorCode": 0,
[2025-11-21 18:52:27]     "exeErrorDiag": "",
[2025-11-21 18:52:27]     "pilotErrorCode": 0,
[2025-11-21 18:52:27]     "pilotErrorDiag": "",
[2025-11-21 18:52:27]  *** Listing of results directory ***
[2025-11-21 18:52:27] total 1303244
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 08:50 pilot3.tar.gz
[2025-11-21 18:52:27] -rwx------. 1 boincer umatlas     36292 Nov 20 08:51 runpilot2-wrapper.sh
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 08:51 queuedata.json
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas       100 Nov 21 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 18:52:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 08:39 run_atlas
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas       105 Nov 21 08:39 job.xml
[2025-11-21 18:52:27] -rw-r--r--. 2 boincer umatlas 408955564 Nov 21 08:39 EVNT.47493127._000559.pool.root.1
[2025-11-21 18:52:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:39 start_atlas.sh
[2025-11-21 18:52:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 08:39 shared
[2025-11-21 18:52:27] -rw-r--r--. 2 boincer umatlas    590090 Nov 21 08:39 input.tar.gz
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas         0 Nov 21 08:39 boinc_lockfile
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 08:39 pandaJob.out
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas        57 Nov 21 08:39 setup.sh.local
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas    989817 Nov 21 08:40 agis_schedconf.cvmfs.json
[2025-11-21 18:52:27] drwx------. 5 boincer umatlas      4096 Nov 21 08:40 pilot3
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas       533 Nov 21 18:43 boinc_task_state.xml
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas      6902 Nov 21 18:47 init_data.xml
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas 907995273 Nov 21 18:50 HITS.47523449._005582.pool.root.1
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas      1047 Nov 21 18:51 memory_monitor_summary.json
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas   1526164 Nov 21 18:51 agis_ddmendpoints.agis.ALL.json
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas   1856933 Nov 21 18:51 log.47523449._005582.job.log.tgz.1
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas        95 Nov 21 18:51 pilot_heartbeat.json
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas      8581 Nov 21 18:51 heartbeat.json
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas        29 Nov 21 18:52 wrapper_checkpoint.txt
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 18:52 boinc_mmap_file
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas      4822 Nov 21 18:52 pilotlog.txt
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas   4966997 Nov 21 18:52 log.47523449._005582.job.log.1
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas       353 Nov 21 18:52 output.list
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas       620 Nov 21 18:52 runtime_log
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas   6840320 Nov 21 18:52 result.tar.gz
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 18:52 runtime_log.err
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas       660 Nov 21 18:52 mxiMDmKFKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwzHKDmYvfO0n.diag
[2025-11-21 18:52:27] -rw-r--r--. 1 boincer umatlas     21314 Nov 21 18:52 stderr.txt
[2025-11-21 18:52:27] HITS file was successfully produced:
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas 907995273 Nov 21 18:50 shared/HITS.pool.root.1
[2025-11-21 18:52:27]  *** Contents of shared directory: ***
[2025-11-21 18:52:27] total 1293372
[2025-11-21 18:52:27] -rw-r--r--. 2 boincer umatlas 408955564 Nov 21 08:39 ATLAS.root_0
[2025-11-21 18:52:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:39 start_atlas.sh
[2025-11-21 18:52:27] -rw-r--r--. 2 boincer umatlas    590090 Nov 21 08:39 input.tar.gz
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas 907995273 Nov 21 18:50 HITS.pool.root.1
[2025-11-21 18:52:27] -rw-------. 1 boincer umatlas   6840320 Nov 21 18:52 result.tar.gz
18:52:29 (7038): run_atlas exited; CPU time 194935.236616
18:52:29 (7038): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN