Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:11:44 (17280): wrapper (7.7.26015): starting
06:11:44 (17280): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 06:11:44] Arguments: --nthreads 8
[2025-11-21 06:11:44] Threads: 8
[2025-11-21 06:11:44] Checking for CVMFS
[2025-11-21 06:11:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 06:11:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 06:11:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 06:11:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 06:11:45] 2.11.2.0 2830 41588 85324 153121 1 81 18530026 20275200 1 130560 0 6602033 99.642 2753334 26818 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 06:11:45] CVMFS is ok
[2025-11-21 06:11:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 06:11:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 06:11:45] Further information can be found at the LHC@home message board.
[2025-11-21 06:11:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 06:11:45] Checking for apptainer binary...
[2025-11-21 06:11:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 06:11:45] Running /usr/bin/apptainer --version
[2025-11-21 06:11:45] apptainer version 1.3.2-1.el7
[2025-11-21 06:11:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 06:11:46] c-204-5.aglt2.org
[2025-11-21 06:11:46] apptainer works
[2025-11-21 06:11:46] Set ATHENA_PROC_NUMBER=8
[2025-11-21 06:11:46] Set ATHENA_CORE_NUMBER=8
[2025-11-21 06:11:46] Starting ATLAS job with PandaID=6893875893
[2025-11-21 06:11:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 18:42:23]  *** The last 200 lines of the pilot log: ***
[2025-11-21 18:42:23] 2025-11-21 23:41:40,049 | INFO     | time since job start (44977s) is within the limit (172800.0s)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,322 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 18:42:23] 2025-11-21 23:41:41,330 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2025-11-21 18:42:23] 2025-11-21 23:41:41,332 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893875893/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,332 | INFO     | extracted standard info from prmon json
[2025-11-21 18:42:23] 2025-11-21 23:41:41,333 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 18:42:23] 2025-11-21 23:41:41,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 18:42:23] 2025-11-21 23:41:41,345 | INFO     | fitting pss+swap vs Time
[2025-11-21 18:42:23] 2025-11-21 23:41:41,346 | INFO     | sum of square deviations: 124131214398.78949
[2025-11-21 18:42:23] 2025-11-21 23:41:41,351 | INFO     | monitor loop #3305: job 0:6893875893 is in state 'finished'
[2025-11-21 18:42:23] 2025-11-21 23:41:41,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,358 | INFO     | sum of deviations: 891105987739.933
[2025-11-21 18:42:23] 2025-11-21 23:41:41,358 | INFO     | mean x: 1763746002.568521
[2025-11-21 18:42:23] 2025-11-21 23:41:41,358 | INFO     | mean y: 3040619.6350067845
[2025-11-21 18:42:23] 2025-11-21 23:41:41,358 | INFO     | intersect: -12658437247.583113
[2025-11-21 18:42:23] 2025-11-21 23:41:41,359 | INFO     | chi2: 5.65767929271102
[2025-11-21 18:42:23] 2025-11-21 23:41:41,360 | INFO     | sum of square deviations: 121622030027.16295
[2025-11-21 18:42:23] 2025-11-21 23:41:41,372 | INFO     | sum of deviations: 1123996098370.7068
[2025-11-21 18:42:23] 2025-11-21 23:41:41,372 | INFO     | mean x: 1763745850.0724044
[2025-11-21 18:42:23] 2025-11-21 23:41:41,372 | INFO     | mean y: 3054767.911202186
[2025-11-21 18:42:23] 2025-11-21 23:41:41,372 | INFO     | intersect: -16296981118.318876
[2025-11-21 18:42:23] 2025-11-21 23:41:41,373 | INFO     | chi2: 3.0800691971185437
[2025-11-21 18:42:23] 2025-11-21 23:41:41,373 | INFO     | current chi2=3.0800691971185437 (change=45.559494666184044 %)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,374 | INFO     | sum of square deviations: 119146848397.66454
[2025-11-21 18:42:23] 2025-11-21 23:41:41,385 | INFO     | sum of deviations: 1202973039055.8403
[2025-11-21 18:42:23] 2025-11-21 23:41:41,385 | INFO     | mean x: 1763745697.5749657
[2025-11-21 18:42:23] 2025-11-21 23:41:41,385 | INFO     | mean y: 3059618.56258597
[2025-11-21 18:42:23] 2025-11-21 23:41:41,385 | INFO     | intersect: -17804700724.807175
[2025-11-21 18:42:23] 2025-11-21 23:41:41,386 | INFO     | chi2: 2.5075963256862512
[2025-11-21 18:42:23] 2025-11-21 23:41:41,386 | INFO     | current chi2=2.5075963256862512 (change=18.586363967661843 %)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,386 | INFO     | right removable region: 726
[2025-11-21 18:42:23] 2025-11-21 23:41:41,387 | INFO     | sum of square deviations: 121621774437.16281
[2025-11-21 18:42:23] 2025-11-21 23:41:41,398 | INFO     | sum of deviations: 677151344638.7567
[2025-11-21 18:42:23] 2025-11-21 23:41:41,398 | INFO     | mean x: 1763746155.0724044
[2025-11-21 18:42:23] 2025-11-21 23:41:41,398 | INFO     | mean y: 3053601.4385245903
[2025-11-21 18:42:23] 2025-11-21 23:41:41,399 | INFO     | intersect: -9816923832.995106
[2025-11-21 18:42:23] 2025-11-21 23:41:41,399 | INFO     | chi2: 3.431864271217555
[2025-11-21 18:42:23] 2025-11-21 23:41:41,399 | INFO     | current chi2=3.431864271217555 (change=39.341484491018385 %)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,400 | INFO     | sum of square deviations: 119146470929.81299
[2025-11-21 18:42:23] 2025-11-21 23:41:41,411 | INFO     | sum of deviations: 610285284196.9934
[2025-11-21 18:42:23] 2025-11-21 23:41:41,412 | INFO     | mean x: 1763746307.57359
[2025-11-21 18:42:23] 2025-11-21 23:41:41,412 | INFO     | mean y: 3057719.8225584594
[2025-11-21 18:42:23] 2025-11-21 23:41:41,412 | INFO     | intersect: -9031103411.169115
[2025-11-21 18:42:23] 2025-11-21 23:41:41,413 | INFO     | chi2: 3.3095640426682973
[2025-11-21 18:42:23] 2025-11-21 23:41:41,413 | INFO     | current chi2=3.3095640426682973 (change=3.5636674088473845 %)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,413 | INFO     | left removable region: 20
[2025-11-21 18:42:23] 2025-11-21 23:41:41,414 | INFO     | sum of square deviations: 109117149000.39835
[2025-11-21 18:42:23] 2025-11-21 23:41:41,424 | INFO     | sum of deviations: 838152080507.6887
[2025-11-21 18:42:23] 2025-11-21 23:41:41,424 | INFO     | mean x: 1763746277.0807366
[2025-11-21 18:42:23] 2025-11-21 23:41:41,424 | INFO     | mean y: 3082294.0580736543
[2025-11-21 18:42:23] 2025-11-21 23:41:41,424 | INFO     | intersect: -13544628814.280298
[2025-11-21 18:42:23] 2025-11-21 23:41:41,425 | INFO     | chi2: 0.09331942894221762
[2025-11-21 18:42:23] 2025-11-21 23:41:41,425 | INFO     | current memory leak: 7.68 B/s (using 706 data points, chi2=0.09)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,426 | INFO     | could have reported an average CPU frequency of 2178 MHz (28 samples)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,426 | INFO     | ..............................
[2025-11-21 18:42:23] 2025-11-21 23:41:41,426 | INFO     | . Timing measurements:
[2025-11-21 18:42:23] 2025-11-21 23:41:41,426 | INFO     | . get job = 0 s
[2025-11-21 18:42:23] 2025-11-21 23:41:41,426 | INFO     | . initial setup = 2 s
[2025-11-21 18:42:23] 2025-11-21 23:41:41,426 | INFO     | . payload setup = 8 s
[2025-11-21 18:42:23] 2025-11-21 23:41:41,426 | INFO     | . stage-in = 0 s
[2025-11-21 18:42:23] 2025-11-21 23:41:41,426 | INFO     | . payload execution = 44938 s
[2025-11-21 18:42:23] 2025-11-21 23:41:41,427 | INFO     | . stage-out = 3 s
[2025-11-21 18:42:23] 2025-11-21 23:41:41,427 | INFO     | . log creation = 0 s
[2025-11-21 18:42:23] 2025-11-21 23:41:41,427 | INFO     | ..............................
[2025-11-21 18:42:23] 2025-11-21 23:41:41,515 | INFO     | 
[2025-11-21 18:42:23] 2025-11-21 23:41:41,515 | INFO     | job summary report
[2025-11-21 18:42:23] 2025-11-21 23:41:41,515 | INFO     | --------------------------------------------------
[2025-11-21 18:42:23] 2025-11-21 23:41:41,516 | INFO     | PanDA job id: 6893875893
[2025-11-21 18:42:23] 2025-11-21 23:41:41,516 | INFO     | task id: 47523449
[2025-11-21 18:42:23] 2025-11-21 23:41:41,516 | INFO     | errors: (none)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,516 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 18:42:23] 2025-11-21 23:41:41,516 | INFO     | pilot state: finished 
[2025-11-21 18:42:23] 2025-11-21 23:41:41,517 | INFO     | transexitcode: 0
[2025-11-21 18:42:23] 2025-11-21 23:41:41,517 | INFO     | exeerrorcode: 0
[2025-11-21 18:42:23] 2025-11-21 23:41:41,517 | INFO     | exeerrordiag: 
[2025-11-21 18:42:23] 2025-11-21 23:41:41,517 | INFO     | exitcode: 0
[2025-11-21 18:42:23] 2025-11-21 23:41:41,517 | INFO     | exitmsg: OK
[2025-11-21 18:42:23] 2025-11-21 23:41:41,517 | INFO     | cpuconsumptiontime: 348438 s
[2025-11-21 18:42:23] 2025-11-21 23:41:41,518 | INFO     | nevents: 1000
[2025-11-21 18:42:23] 2025-11-21 23:41:41,518 | INFO     | neventsw: 0
[2025-11-21 18:42:23] 2025-11-21 23:41:41,518 | INFO     | pid: 27485
[2025-11-21 18:42:23] 2025-11-21 23:41:41,518 | INFO     | pgrp: 27485
[2025-11-21 18:42:23] 2025-11-21 23:41:41,518 | INFO     | corecount: 8
[2025-11-21 18:42:23] 2025-11-21 23:41:41,518 | INFO     | event service: False
[2025-11-21 18:42:23] 2025-11-21 23:41:41,519 | INFO     | sizes: {0: 2298755, 6: 2299017, 11: 2299045, 44951: 2344970, 44955: 2354020, 44962: 2354210}
[2025-11-21 18:42:23] 2025-11-21 23:41:41,519 | INFO     | --------------------------------------------------
[2025-11-21 18:42:23] 2025-11-21 23:41:41,519 | INFO     | 
[2025-11-21 18:42:23] 2025-11-21 23:41:41,519 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 18:42:23] 2025-11-21 23:41:41,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,546 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 18:42:23] 2025-11-21 23:41:41,550 | INFO     | job 6893875893 has completed (purged errors)
[2025-11-21 18:42:23] 2025-11-21 23:41:41,550 | INFO     | overall cleanup function is called
[2025-11-21 18:42:23] 2025-11-21 23:41:42,564 | INFO     | --- collectZombieJob: --- 10, [27485]
[2025-11-21 18:42:23] 2025-11-21 23:41:42,564 | INFO     | zombie collector waiting for pid 27485
[2025-11-21 18:42:23] 2025-11-21 23:41:42,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 18:42:23] 2025-11-21 23:41:42,565 | INFO     | collected zombie processes
[2025-11-21 18:42:23] 2025-11-21 23:41:42,565 | INFO     | will attempt to kill all subprocesses of pid=27485
[2025-11-21 18:42:23] 2025-11-21 23:41:42,655 | INFO     | process IDs to be killed: [27485] (in reverse order)
[2025-11-21 18:42:23] 2025-11-21 23:41:42,707 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 18:42:23] 2025-11-21 23:41:42,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 18:42:23] 2025-11-21 23:41:42,711 | INFO     | did not find any defunct processes belonging to 27485
[2025-11-21 18:42:23] 2025-11-21 23:41:42,715 | INFO     | did not find any defunct processes belonging to 27485
[2025-11-21 18:42:23] 2025-11-21 23:41:42,717 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 18:42:23] 2025-11-21 23:41:42,718 | INFO     | ready for new job
[2025-11-21 18:42:23] 2025-11-21 23:41:42,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 18:42:23] 2025-11-21 23:41:42,722 | INFO     | ***************************************
[2025-11-21 18:42:23] 2025-11-21 23:41:42,722 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 18:42:23] 2025-11-21 23:41:42,722 | INFO     | ***************************************
[2025-11-21 18:42:23] 2025-11-21 23:41:42,722 | INFO     | 
[2025-11-21 18:42:23] 2025-11-21 23:41:42,723 | INFO     | architecture information:
[2025-11-21 18:42:23] 2025-11-21 23:41:42,724 | INFO     | executing command: cat /etc/os-release
[2025-11-21 18:42:23] 2025-11-21 23:41:42,740 | INFO     | cat /etc/os-release:
[2025-11-21 18:42:23] NAME="CentOS Linux"
[2025-11-21 18:42:23] VERSION="7 (Core)"
[2025-11-21 18:42:23] ID="centos"
[2025-11-21 18:42:23] ID_LIKE="rhel fedora"
[2025-11-21 18:42:23] VERSION_ID="7"
[2025-11-21 18:42:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 18:42:23] ANSI_COLOR="0;31"
[2025-11-21 18:42:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 18:42:23] HOME_URL="https://www.centos.org/"
[2025-11-21 18:42:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 18:42:23] 
[2025-11-21 18:42:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 18:42:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 18:42:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 18:42:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 18:42:23] 
[2025-11-21 18:42:23] 2025-11-21 23:41:42,741 | INFO     | ***************************************
[2025-11-21 18:42:23] 2025-11-21 23:41:43,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 18:42:23] 2025-11-21 23:41:43,263 | INFO     | sufficient remaining disk space (17460887552 B)
[2025-11-21 18:42:23] 2025-11-21 23:41:43,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 18:42:23] 2025-11-21 23:41:43,263 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 18:42:23] 2025-11-21 23:41:43,264 | INFO     | update_server=False
[2025-11-21 18:42:23] 2025-11-21 23:41:43,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 18:42:23] 2025-11-21 23:41:43,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:42:23] 2025-11-21 23:41:43,265 | INFO     | aborting loop
[2025-11-21 18:42:23] 2025-11-21 23:41:43,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 18:42:23] 2025-11-21 23:41:43,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:42:23] 2025-11-21 23:41:43,405 | INFO     | all job control threads have been joined
[2025-11-21 18:42:23] 2025-11-21 23:41:43,623 | INFO     | all payload control threads have been joined
[2025-11-21 18:42:23] 2025-11-21 23:41:43,827 | INFO     | all data control threads have been joined
[2025-11-21 18:42:23] 2025-11-21 23:41:44,270 | INFO     | [job] retrieve thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,271 | INFO     | [job] job monitor thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,272 | INFO     | [job] queue monitor thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,320 | INFO     | [data] copytool_in thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,346 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,408 | INFO     | [job] validate thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,411 | INFO     | [job] control thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,622 | INFO     | [payload] validate_post thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,627 | INFO     | [payload] control thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:44,833 | INFO     | [data] control thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:45,022 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:45,232 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:45,271 | INFO     | [data] copytool_out thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:45,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 18:42:23] 2025-11-21 23:41:45,865 | INFO     | [payload] failed_post thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:41:49,412 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 18:42:23] 2025-11-21 23:42:08,568 [wrapper] supervise_pilot (15 min periods counter: 51)
[2025-11-21 18:42:23] 2025-11-21 23:42:13,246 | INFO     | PID=20957 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 18:42:23] 2025-11-21 23:42:13,246 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 18:42:23] 2025-11-21 23:42:13,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 18:42:23] 2025-11-21 23:42:13,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 18:42:23] 2025-11-21 23:42:17,712 | INFO     | [monitor] cgroup control has ended
[2025-11-21 18:42:23] 2025-11-21 23:42:18,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139799324120896)>', '<ExcThread(monitor, started 139798752777984)>']
[2025-11-21 18:42:23] 2025-11-21 23:42:19,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 18:42:23] 2025-11-21 23:42:19,269 | INFO     | [monitor] control thread has ended
[2025-11-21 18:42:23] 2025-11-21 23:42:23,580 | INFO     | all workflow threads have been joined
[2025-11-21 18:42:23] 2025-11-21 23:42:23,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 18:42:23] 2025-11-21 23:42:23,581 | INFO     | traces error code: 0
[2025-11-21 18:42:23] 2025-11-21 23:42:23,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 18:42:23] 2025-11-21 23:42:23,705 [wrapper] ==== pilot stdout END ====
[2025-11-21 18:42:23] 2025-11-21 23:42:23,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 18:42:23] 2025-11-21 23:42:23,715 [wrapper] pilotpid: 20957
[2025-11-21 18:42:23] 2025-11-21 23:42:23,719 [wrapper] Pilot exit status: 0
[2025-11-21 18:42:23] 2025-11-21 23:42:23,735 [wrapper] pandaids: 6893875893
[2025-11-21 18:42:23] 2025-11-21 23:42:23,778 [wrapper] cleanup supervisor_pilot  4796 20958
[2025-11-21 18:42:23] 2025-11-21 23:42:23,783 [wrapper] Test setup, not cleaning
[2025-11-21 18:42:23] 2025-11-21 23:42:23,788 [wrapper] apfmon messages muted
[2025-11-21 18:42:23] 2025-11-21 23:42:23,792 [wrapper] ==== wrapper stdout END ====
[2025-11-21 18:42:23] 2025-11-21 23:42:23,797 [wrapper] ==== wrapper stderr END ====
[2025-11-21 18:42:23]  *** Error codes and diagnostics ***
[2025-11-21 18:42:23]     "exeErrorCode": 0,
[2025-11-21 18:42:23]     "exeErrorDiag": "",
[2025-11-21 18:42:23]     "pilotErrorCode": 0,
[2025-11-21 18:42:23]     "pilotErrorDiag": "",
[2025-11-21 18:42:23]  *** Listing of results directory ***
[2025-11-21 18:42:23] total 1324724
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 11:47 pilot3.tar.gz
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 11:50 queuedata.json
[2025-11-21 18:42:23] -rwx------ 1 boincer umatlas     36292 Nov 20 11:50 runpilot2-wrapper.sh
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas       100 Nov 21 06:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 18:42:23] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 06:11 run_atlas
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas       105 Nov 21 06:11 job.xml
[2025-11-21 18:42:23] -rw-r--r-- 2 boincer umatlas 409388854 Nov 21 06:11 EVNT.47493127._000748.pool.root.1
[2025-11-21 18:42:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 06:11 start_atlas.sh
[2025-11-21 18:42:23] drwxrwx--x 2 boincer umatlas      4096 Nov 21 06:11 shared
[2025-11-21 18:42:23] -rw-r--r-- 2 boincer umatlas    590098 Nov 21 06:11 input.tar.gz
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas         0 Nov 21 06:11 boinc_lockfile
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas      2784 Nov 21 06:11 pandaJob.out
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas        57 Nov 21 06:11 setup.sh.local
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas    989817 Nov 21 06:12 agis_schedconf.cvmfs.json
[2025-11-21 18:42:23] drwx------ 5 boincer umatlas      4096 Nov 21 06:12 pilot3
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas       533 Nov 21 18:32 boinc_task_state.xml
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas      5910 Nov 21 18:37 init_data.xml
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas 926822657 Nov 21 18:40 HITS.47523449._007475.pool.root.1
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas      1063 Nov 21 18:41 memory_monitor_summary.json
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas   1526164 Nov 21 18:41 agis_ddmendpoints.agis.ALL.json
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas   1982382 Nov 21 18:41 log.47523449._007475.job.log.tgz.1
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas      8657 Nov 21 18:41 heartbeat.json
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas        95 Nov 21 18:42 pilot_heartbeat.json
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 18:42 boinc_mmap_file
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas        29 Nov 21 18:42 wrapper_checkpoint.txt
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas      4746 Nov 21 18:42 pilotlog.txt
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas   6208404 Nov 21 18:42 log.47523449._007475.job.log.1
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas       353 Nov 21 18:42 output.list
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas       620 Nov 21 18:42 runtime_log
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas   8212480 Nov 21 18:42 result.tar.gz
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas      9338 Nov 21 18:42 runtime_log.err
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas       667 Nov 21 18:42 cPwMDmu2Mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdKIKDmzD8kin.diag
[2025-11-21 18:42:23] -rw-r--r-- 1 boincer umatlas     21270 Nov 21 18:42 stderr.txt
[2025-11-21 18:42:23] HITS file was successfully produced:
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas 926822657 Nov 21 18:40 shared/HITS.pool.root.1
[2025-11-21 18:42:23]  *** Contents of shared directory: ***
[2025-11-21 18:42:23] total 1313520
[2025-11-21 18:42:23] -rw-r--r-- 2 boincer umatlas 409388854 Nov 21 06:11 ATLAS.root_0
[2025-11-21 18:42:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 06:11 start_atlas.sh
[2025-11-21 18:42:23] -rw-r--r-- 2 boincer umatlas    590098 Nov 21 06:11 input.tar.gz
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas 926822657 Nov 21 18:40 HITS.pool.root.1
[2025-11-21 18:42:23] -rw------- 1 boincer umatlas   8212480 Nov 21 18:42 result.tar.gz
18:42:25 (17280): run_atlas exited; CPU time 345167.276774
18:42:25 (17280): called boinc_finish(0)

</stderr_txt>
]]>

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