Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:08:01 (2117930): wrapper (7.7.26015): starting
12:08:01 (2117930): wrapper: running run_atlas (--nthreads 3)
[2025-11-21 12:08:01] Arguments: --nthreads 3
[2025-11-21 12:08:01] Threads: 3
[2025-11-21 12:08:01] Checking for CVMFS
[2025-11-21 12:08:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 12:08:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 12:08:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 12:08:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 12:08:02] 2.9.2.0 16720 1334 72880 153121 0 88 34505954 36864001 0 130560 0 18918279 99.999 37570 1556 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 12:08:02] CVMFS is ok
[2025-11-21 12:08:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 12:08:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 12:08:02] Further information can be found at the LHC@home message board.
[2025-11-21 12:08:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 12:08:02] Checking for apptainer binary...
[2025-11-21 12:08:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 12:08:02] Running /usr/bin/apptainer --version
[2025-11-21 12:08:02] apptainer version 1.4.1-1.1
[2025-11-21 12:08:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 12:08:02] thA335
[2025-11-21 12:08:02] apptainer works
[2025-11-21 12:08:02] Set ATHENA_PROC_NUMBER=3
[2025-11-21 12:08:02] Set ATHENA_CORE_NUMBER=3
[2025-11-21 12:08:02] Starting ATLAS job with PandaID=6893887090
[2025-11-21 12:08:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 12:12:21]  *** The last 200 lines of the pilot log: ***
[2025-11-21 12:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 12:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 12:12:21] 
[2025-11-21 12:12:21] 2025-11-21 11:11:28,144 | INFO     | ***************************************
[2025-11-21 12:12:21] 2025-11-21 11:11:28,648 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-21 12:12:21] 2025-11-21 11:11:28,661 | INFO     | sufficient remaining disk space (827127234560 B)
[2025-11-21 12:12:21] 2025-11-21 11:11:28,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 12:12:21] 2025-11-21 11:11:28,661 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 12:12:21] 2025-11-21 11:11:28,661 | INFO     | update_server=False
[2025-11-21 12:12:21] 2025-11-21 11:11:28,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 12:12:21] 2025-11-21 11:11:28,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 12:12:21] 2025-11-21 11:11:28,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 12:12:21] 2025-11-21 11:11:28,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:12:21] 2025-11-21 11:11:28,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:12:21] 2025-11-21 11:11:28,871 | INFO     | aborting loop
[2025-11-21 12:12:21] 2025-11-21 11:11:29,365 | INFO     | all payload control threads have been joined
[2025-11-21 12:12:21] 2025-11-21 11:11:29,464 | INFO     | all data control threads have been joined
[2025-11-21 12:12:21] 2025-11-21 11:11:29,667 | INFO     | [job] retrieve thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:29,668 | INFO     | [job] queue monitor thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:29,725 | INFO     | [data] copytool_in thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:29,746 | INFO     | all job control threads have been joined
[2025-11-21 12:12:21] 2025-11-21 11:11:29,877 | INFO     | [job] job monitor thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:29,895 | INFO     | [payload] validate_post thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,202 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,368 | INFO     | [job] validate thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,370 | INFO     | [payload] control thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,423 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,457 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,470 | INFO     | [data] control thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,514 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,668 | INFO     | [data] copytool_out thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,752 | INFO     | [job] control thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:30,799 | INFO     | [payload] failed_post thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:32,668 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 12:12:21] 2025-11-21 11:11:58,229 | INFO     | PID=2121666 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 12:12:21] 2025-11-21 11:11:58,229 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 12:12:21] 2025-11-21 11:11:58,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 12:12:21] 2025-11-21 11:11:58,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 12:12:21] 2025-11-21 11:12:15,170 | INFO     | [monitor] cgroup control has ended
[2025-11-21 12:12:21] 2025-11-21 11:12:16,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068309788480)>', '<ExcThread(monitor, started 140067607672576)>']
[2025-11-21 12:12:21] 2025-11-21 11:12:16,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 12:12:21] 2025-11-21 11:12:16,326 | INFO     | [monitor] control thread has ended
[2025-11-21 12:12:21] 2025-11-21 11:12:21,202 | INFO     | all workflow threads have been joined
[2025-11-21 12:12:21] 2025-11-21 11:12:21,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 12:12:21] 2025-11-21 11:12:21,203 | INFO     | traces error code: 0
[2025-11-21 12:12:21] 2025-11-21 11:12:21,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 12:12:21] 2025-11-21 11:12:21,249 [wrapper] ==== pilot stdout END ====
[2025-11-21 12:12:21] 2025-11-21 11:12:21,252 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 12:12:21] 2025-11-21 11:12:21,255 [wrapper] pilotpid: 2121666
[2025-11-21 12:12:21] 2025-11-21 11:12:21,258 [wrapper] Pilot exit status: 0
[2025-11-21 12:12:21] 2025-11-21 11:12:21,265 [wrapper] pandaids: 6893887090
[2025-11-21 12:12:21] 2025-11-21 11:12:21,282 [wrapper] cleanup supervisor_pilot 2121672 2121667
[2025-11-21 12:12:21] 2025-11-21 11:12:21,284 [wrapper] Test setup, not cleaning
[2025-11-21 12:12:21] 2025-11-21 11:12:21,287 [wrapper] apfmon messages muted
[2025-11-21 12:12:21] 2025-11-21 11:12:21,289 [wrapper] ==== wrapper stdout END ====
[2025-11-21 12:12:21] 2025-11-21 11:12:21,292 [wrapper] ==== wrapper stderr END ====
[2025-11-21 12:12:21]  *** Error codes and diagnostics ***
[2025-11-21 12:12:21]     "exeErrorCode": 65,
[2025-11-21 12:12:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 12:12:21]     "pilotErrorCode": 1305,
[2025-11-21 12:12:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 12:12:21]  *** Listing of results directory ***
[2025-11-21 12:12:21] total 404548
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc      5112 Nov 21 00:03 queuedata.json
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc    576529 Nov 21 00:03 pilot3.tar.gz
[2025-11-21 12:12:21] -rwx------ 1 boinc boinc     36292 Nov 21 00:04 runpilot2-wrapper.sh
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc       100 Nov 21 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 12:12:21] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 12:08 run_atlas
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc       105 Nov 21 12:08 job.xml
[2025-11-21 12:12:21] -rw-r--r-- 2 boinc boinc 410065875 Nov 21 12:08 EVNT.47493127._000963.pool.root.1
[2025-11-21 12:12:21] -rw-r--r-- 2 boinc boinc    590100 Nov 21 12:08 input.tar.gz
[2025-11-21 12:12:21] -rw-r--r-- 2 boinc boinc     15847 Nov 21 12:08 start_atlas.sh
[2025-11-21 12:12:21] drwxrwx--x 2 boinc boinc      4096 Nov 21 12:08 shared
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc         0 Nov 21 12:08 boinc_setup_complete
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc      6194 Nov 21 12:08 init_data.xml
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc         0 Nov 21 12:08 boinc_lockfile
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc      2785 Nov 21 12:08 pandaJob.out
[2025-11-21 12:12:21] -rw------- 1 boinc boinc    989817 Nov 21 12:08 agis_schedconf.cvmfs.json
[2025-11-21 12:12:21] -rw------- 1 boinc boinc   1526164 Nov 21 12:08 agis_ddmendpoints.agis.ALL.json
[2025-11-21 12:12:21] drwx------ 5 boinc boinc      4096 Nov 21 12:08 pilot3
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc       523 Nov 21 12:09 boinc_task_state.xml
[2025-11-21 12:12:21] -rw------- 1 boinc boinc       939 Nov 21 12:09 memory_monitor_summary.json
[2025-11-21 12:12:21] -rw------- 1 boinc boinc     56154 Nov 21 12:09 log.47523449._009624.job.log.tgz.1
[2025-11-21 12:12:21] -rw------- 1 boinc boinc        95 Nov 21 12:11 pilot_heartbeat.json
[2025-11-21 12:12:21] -rw------- 1 boinc boinc      8400 Nov 21 12:11 heartbeat.json
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc      8192 Nov 21 12:11 boinc_mmap_file
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc        23 Nov 21 12:11 wrapper_checkpoint.txt
[2025-11-21 12:12:21] -rw------- 1 boinc boinc      4752 Nov 21 12:12 pilotlog.txt
[2025-11-21 12:12:21] -rw------- 1 boinc boinc     93174 Nov 21 12:12 log.47523449._009624.job.log.1
[2025-11-21 12:12:21] -rw------- 1 boinc boinc       186 Nov 21 12:12 output.list
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc       620 Nov 21 12:12 runtime_log
[2025-11-21 12:12:21] -rw------- 1 boinc boinc    163840 Nov 21 12:12 result.tar.gz
[2025-11-21 12:12:21] -rw------- 1 boinc boinc       649 Nov 21 12:12 vwNMDmpsSg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMeIKDm9FveSm.diag
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc      8744 Nov 21 12:12 runtime_log.err
[2025-11-21 12:12:21] -rw-r--r-- 1 boinc boinc      8470 Nov 21 12:12 stderr.txt
[2025-11-21 12:12:21] No HITS result produced
[2025-11-21 12:12:21]  *** Contents of shared directory: ***
[2025-11-21 12:12:21] total 401216
[2025-11-21 12:12:21] -rw-r--r-- 2 boinc boinc 410065875 Nov 21 12:08 ATLAS.root_0
[2025-11-21 12:12:21] -rw-r--r-- 2 boinc boinc    590100 Nov 21 12:08 input.tar.gz
[2025-11-21 12:12:21] -rw-r--r-- 2 boinc boinc     15847 Nov 21 12:08 start_atlas.sh
[2025-11-21 12:12:21] -rw------- 1 boinc boinc    163840 Nov 21 12:12 result.tar.gz
12:12:23 (2117930): run_atlas exited; CPU time 31.830075
12:12:23 (2117930): called boinc_finish(0)

</stderr_txt>
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